View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7433_low_8 (Length: 400)
Name: NF7433_low_8
Description: NF7433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7433_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 345; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 17 - 381
Target Start/End: Original strand, 2577256 - 2577620
Alignment:
| Q |
17 |
acatcatacaaattagactatgcaatagtgacttaacttgcttattatggataaagatagagcttgatctacagagttgtgacattgaaagaaagttcac |
116 |
Q |
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| T |
2577256 |
acatcatacaaattagactatgcaatagtgacttaacttgcttattatggataaagatagagcttgatctacagagttgggacattgaaagaaagttcac |
2577355 |
T |
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| Q |
117 |
aattctccccatgggtttcttaccaatcaacacttctatcaaaaccacatcttaacaatcaagggtactccaatatacacattgtgaagaaatatatcaa |
216 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
2577356 |
aattctctccatgggtttcttaccaatcaacacttctatcaaaaccacatcttaacaatcaagggtactccaatatacacattgtgaagaaatatatcca |
2577455 |
T |
|
| Q |
217 |
aattgatcaacaactaaaaaggaatagagattgaagttaccatttttaacaaagtaatagggactgaagttaccattgccaacaagcttagccaagctaa |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2577456 |
aattgatcaacaactaaaaaggaatagagattgaagttaccatttttaacaaagtaatagggactgaagttaccattgccaacaagcttagccaagctaa |
2577555 |
T |
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| Q |
317 |
taacgaaaccaaatagttcgaatgcagagccaaagatatatccaaaagaaagtttcatgcattcc |
381 |
Q |
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|| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2577556 |
tagcgaaaccaaatagttcaaatgcagagccaaagatatatccaaaagaaagtttcatgcattcc |
2577620 |
T |
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