View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7436_low_6 (Length: 393)

Name: NF7436_low_6
Description: NF7436
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7436_low_6
NF7436_low_6
[»] chr1 (20 HSPs)
chr1 (1-379)||(15505656-15506033)
chr1 (101-250)||(46631483-46631632)
chr1 (1-38)||(4349730-4349767)
chr1 (1-38)||(46247982-46248019)
chr1 (1-61)||(20036313-20036373)
chr1 (1-55)||(4587574-4587629)
chr1 (3-54)||(30682906-30682957)
chr1 (4-38)||(19932782-19932816)
chr1 (4-38)||(35005220-35005254)
chr1 (1-38)||(11596604-11596641)
chr1 (5-38)||(18944741-18944774)
chr1 (1-38)||(19414529-19414566)
chr1 (1-30)||(21910686-21910715)
chr1 (5-38)||(27474376-27474409)
chr1 (1-38)||(32632586-32632623)
chr1 (1-38)||(35253216-35253253)
chr1 (4-37)||(42304237-42304270)
chr1 (1-38)||(45402188-45402225)
chr1 (1-38)||(45812566-45812603)
chr1 (5-37)||(46991900-46991932)
[»] chr2 (19 HSPs)
chr2 (1-62)||(21377078-21377139)
chr2 (1-46)||(8455337-8455382)
chr2 (1-38)||(9671248-9671285)
chr2 (1-38)||(10546232-10546269)
chr2 (1-38)||(14444797-14444834)
chr2 (1-38)||(25249767-25249804)
chr2 (4-38)||(10543772-10543806)
chr2 (4-38)||(23488555-23488589)
chr2 (4-38)||(26684649-26684683)
chr2 (1-62)||(44643592-44643654)
chr2 (1-46)||(4516372-4516417)
chr2 (5-38)||(14530393-14530426)
chr2 (1-46)||(17623633-17623678)
chr2 (1-38)||(21779290-21779327)
chr2 (1-38)||(24890480-24890517)
chr2 (5-38)||(25079746-25079779)
chr2 (1-38)||(25641570-25641607)
chr2 (1-54)||(32781301-32781354)
chr2 (1-37)||(17896329-17896365)
[»] chr8 (22 HSPs)
chr8 (1-62)||(5135294-5135355)
chr8 (1-46)||(36720865-36720910)
chr8 (1-47)||(13160770-13160816)
chr8 (1-55)||(24365071-24365125)
chr8 (1-38)||(29877163-29877200)
chr8 (1-52)||(11000964-11001015)
chr8 (7-38)||(27507985-27508016)
chr8 (1-55)||(45071333-45071388)
chr8 (1-38)||(8897793-8897830)
chr8 (1-38)||(12625959-12625996)
chr8 (1-38)||(12670279-12670316)
chr8 (1-38)||(17823645-17823682)
chr8 (5-38)||(20284098-20284131)
chr8 (5-38)||(21070726-21070759)
chr8 (1-38)||(26102586-26102623)
chr8 (1-38)||(28407472-28407509)
chr8 (5-38)||(28817655-28817688)
chr8 (1-38)||(30454126-30454163)
chr8 (1-38)||(35261748-35261785)
chr8 (1-38)||(44530218-44530255)
chr8 (1-37)||(5689700-5689736)
chr8 (5-37)||(17250905-17250937)
[»] chr4 (27 HSPs)
chr4 (1-47)||(49796866-49796912)
chr4 (1-38)||(7909310-7909347)
chr4 (1-47)||(5648327-5648373)
chr4 (4-38)||(20908665-20908699)
chr4 (4-38)||(21489160-21489194)
chr4 (1-55)||(32478803-32478857)
chr4 (1-62)||(35567239-35567301)
chr4 (1-54)||(25463191-25463244)
chr4 (1-62)||(54967089-54967150)
chr4 (1-37)||(5306694-5306730)
chr4 (1-55)||(40915897-40915952)
chr4 (4-62)||(47482854-47482913)
chr4 (4-38)||(14983906-14983940)
chr4 (4-38)||(20639687-20639721)
chr4 (4-38)||(44363159-44363193)
chr4 (1-47)||(47444026-47444072)
chr4 (1-38)||(6430655-6430692)
chr4 (1-38)||(9832342-9832379)
chr4 (1-38)||(20225051-20225088)
chr4 (5-38)||(25388249-25388282)
chr4 (1-38)||(29207927-29207964)
chr4 (1-38)||(30690205-30690242)
chr4 (5-38)||(33836516-33836549)
chr4 (5-38)||(38755937-38755970)
chr4 (1-38)||(38786678-38786715)
chr4 (1-38)||(51865067-51865104)
chr4 (1-45)||(48598847-48598891)
[»] scaffold0057 (2 HSPs)
scaffold0057 (1-38)||(24801-24838)
scaffold0057 (1-38)||(46900-46937)
[»] chr6 (11 HSPs)
chr6 (1-46)||(24097646-24097691)
chr6 (1-46)||(3815098-3815143)
chr6 (1-55)||(13267794-13267849)
chr6 (1-38)||(1347031-1347068)
chr6 (1-38)||(1354786-1354823)
chr6 (5-46)||(9161197-9161238)
chr6 (4-37)||(11849126-11849159)
chr6 (5-38)||(12221944-12221977)
chr6 (1-62)||(13904985-13905045)
chr6 (1-34)||(15866072-15866105)
chr6 (5-38)||(29355884-29355917)
[»] chr7 (25 HSPs)
chr7 (1-55)||(7879707-7879762)
chr7 (1-62)||(40463945-40464007)
chr7 (2-62)||(13792154-13792215)
chr7 (1-38)||(14099035-14099072)
chr7 (1-38)||(14409052-14409089)
chr7 (1-46)||(21139769-21139814)
chr7 (1-38)||(27889345-27889382)
chr7 (3-38)||(1408528-1408563)
chr7 (1-62)||(18747556-18747618)
chr7 (4-38)||(33500587-33500621)
chr7 (1-38)||(2541048-2541085)
chr7 (1-38)||(10693102-10693139)
chr7 (1-38)||(11617617-11617654)
chr7 (5-38)||(18512482-18512515)
chr7 (1-38)||(21172038-21172075)
chr7 (5-38)||(23231630-23231663)
chr7 (1-38)||(28078161-28078198)
chr7 (1-38)||(32758328-32758365)
chr7 (1-38)||(34626237-34626274)
chr7 (5-38)||(35334845-35334878)
chr7 (1-38)||(38262225-38262262)
chr7 (4-37)||(39123967-39124000)
chr7 (1-38)||(42391129-42391166)
chr7 (1-38)||(48735151-48735188)
chr7 (1-53)||(13805170-13805222)
[»] chr3 (14 HSPs)
chr3 (4-38)||(829471-829505)
chr3 (1-38)||(40272841-40272878)
chr3 (1-38)||(54484782-54484819)
chr3 (14-62)||(45416938-45416986)
chr3 (1-55)||(22609856-22609911)
chr3 (4-62)||(44403559-44403618)
chr3 (1-47)||(16735531-16735577)
chr3 (1-62)||(34771368-34771430)
chr3 (5-38)||(13628819-13628852)
chr3 (1-38)||(22122946-22122983)
chr3 (5-38)||(46421064-46421097)
chr3 (1-38)||(52926248-52926285)
chr3 (1-37)||(15797311-15797347)
chr3 (5-37)||(29366750-29366782)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-38)||(10879-10916)
[»] chr5 (15 HSPs)
chr5 (1-38)||(7097789-7097826)
chr5 (1-38)||(16957383-16957420)
chr5 (1-38)||(24448959-24448996)
chr5 (5-38)||(27328827-27328860)
chr5 (1-38)||(43574675-43574712)
chr5 (4-39)||(37225989-37226024)
chr5 (4-38)||(10306503-10306537)
chr5 (1-38)||(8170013-8170050)
chr5 (1-38)||(19142972-19143009)
chr5 (5-38)||(25622533-25622566)
chr5 (1-38)||(32703491-32703528)
chr5 (1-38)||(34154843-34154880)
chr5 (5-38)||(38879656-38879689)
chr5 (4-32)||(11657734-11657762)
chr5 (2-38)||(21542496-21542532)
[»] scaffold0954 (1 HSPs)
scaffold0954 (5-38)||(3617-3650)
[»] scaffold0180 (1 HSPs)
scaffold0180 (1-38)||(24162-24199)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-38)||(30646-30683)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-38)||(48663-48700)


Alignment Details
Target: chr1 (Bit Score: 318; Significance: 1e-179; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 1 - 379
Target Start/End: Original strand, 15505656 - 15506033
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagcttcgtgcaccgagctgccnnnnnnnatatagtttgtgaaatgtttcattgtttgta 100  Q
    |||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| |||||        ||||||||||||||||||||||||||||||    
T  15505656 accaaatggtgggaccccttcccgaaccctgcgtatgcgggagctttgtgcaccgaactgccttttttt-tatagtttgtgaaatgtttcattgtttgta 15505754  T
Q  101 tgacaggcaagaaaggcactgtgtgctcttagaggaatagtgaagctgcaagcactagtaagaggtcacttagtgagaaaacaagcaactgagacactaa 200  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  15505755 tgacaggcaagaaaggcattatgtgctcttagaggaatagtgaagctgcaagcactagtaagaggtcacttggtgagaaaacaagcaacagagacactaa 15505854  T
Q  201 gatgcatgcaagctttggtcatagcacaagcaagagcttgtgctcaaagggctagaatgttgtcagaagaaaagactaatcaaaagcattctccctacag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15505855 gatgcatgcaagctttggtcatagcacaagcaagagcttgtgctcaaagggctagaatgttgtcagaagaaaagactaatcaaaagcattctccctacag 15505954  T
Q  301 aaaaaccagagaggacaatttattcatgcatgtgtataatgtaagttcaataatgctgctaactacctttcaaattgta 379  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15505955 aaaaaccagagaggacaatttattcatgcatgtgtataatgtaagttcaataatgctgctaactacctttcaaattgta 15506033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 101 - 250
Target Start/End: Original strand, 46631483 - 46631632
Alignment:
Q  101 tgacaggcaagaaaggcactgtgtgctcttagaggaatagtgaagctgcaagcactagtaagaggtcacttagtgagaaaacaagcaactgagacactaa 200  Q
    |||||||||||||||||| || ||||| | |||||| | |||||| |||| |||||  |||| |||||||| ||||||||||||||||  |  ||||| |    
T  46631483 tgacaggcaagaaaggcattgcgtgctttaagaggattggtgaagttgcaggcactgataaggggtcacttggtgagaaaacaagcaaaggcaacactca 46631582  T
Q  201 gatgcatgcaagctttggtcatagcacaagcaagagcttgtgctcaaagg 250  Q
    |||| ||||||| | |||||| ||||||||| |||||| |||||||||||    
T  46631583 gatgtatgcaagatctggtcacagcacaagctagagctcgtgctcaaagg 46631632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 4349730 - 4349767
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  4349730 accaaatggtgggaccccttcccggaccctgcgtatgc 4349767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 46248019 - 46247982
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  46248019 accaaatggtgggaccccttcccggaccctgcgtatgc 46247982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 20036313 - 20036373
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagcttcgtgcaccgagctgc 61  Q
    |||||||||||| ||||||||||| ||||||||||||| | || || |||||||| |||||    
T  20036313 accaaatggtggaaccccttcccggaccctgcgtatgcaggagttttgtgcaccgggctgc 20036373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4587629 - 4587574
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagcttc-gtgcaccg 55  Q
    |||||||||||||||||||||||| ||||||| ||||| | |||||| ||||||||    
T  4587629 accaaatggtgggaccccttcccggaccctgcctatgcgggagcttcagtgcaccg 4587574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 30682906 - 30682957
Alignment:
Q  3 caaatggtgggaccccttcccgaaccctgcgtatgccgaagcttcgtgcacc 54  Q
    |||||||||||||||||||||| ||| ||||||||| | ||||| |||||||    
T  30682906 caaatggtgggaccccttcccggaccgtgcgtatgcgggagctttgtgcacc 30682957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 19932816 - 19932782
Alignment:
Q  4 aaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    ||||||||||||||||||||| |||||||||||||    
T  19932816 aaatggtgggaccccttcccggaccctgcgtatgc 19932782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 35005220 - 35005254
Alignment:
Q  4 aaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    ||||||||||||||||||||| |||||||||||||    
T  35005220 aaatggtgggaccccttcccggaccctgcgtatgc 35005254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 11596604 - 11596641
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||| | |||||||||||||    
T  11596604 accaaatggtgggaccccttcctggaccctgcgtatgc 11596641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 18944741 - 18944774
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||| |||||||||||||    
T  18944741 aatggtgggaccccttcccggaccctgcgtatgc 18944774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 19414529 - 19414566
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  19414529 accaaatggtgggaccccttcccgtaccctgcatatgc 19414566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 21910715 - 21910686
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccct 30  Q
    ||||||||||||||||||||||||||||||    
T  21910715 accaaatggtgggaccccttcccgaaccct 21910686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 27474376 - 27474409
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||| |||||||||||||    
T  27474376 aatggtgggaccccttcccggaccctgcgtatgc 27474409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 32632623 - 32632586
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  32632623 accaaatggtgggaccccttcccaaaccctgcatatgc 32632586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 35253253 - 35253216
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  35253253 accaaatggtgggaccccttcccggaccctgcatatgc 35253216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 42304270 - 42304237
Alignment:
Q  4 aaatggtgggaccccttcccgaaccctgcgtatg 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  42304270 aaatggtgggaccccttcccggaccctgcgtatg 42304237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 45402188 - 45402225
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||  |||||||||||||    
T  45402188 accaaatggtgggaccccttcccagaccctgcgtatgc 45402225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 45812603 - 45812566
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  45812603 accaaatggtgggaccccttcccaaaccctgcatatgc 45812566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 46991900 - 46991932
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatg 37  Q
    |||||||||||||||||||| ||||||||||||    
T  46991900 aatggtgggaccccttcccggaccctgcgtatg 46991932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21377139 - 21377078
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagcttcgtgcaccgagctgcc 62  Q
    |||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||||||    
T  21377139 accaaatggtgggaccccttcccgaaccctgcgtatgtgggagctttgtgcaccgagctgcc 21377078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8455382 - 8455337
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagctt 46  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||    
T  8455382 accaaatggtgggaccccttcccggaccctgcgtatgccggagctt 8455337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 9671248 - 9671285
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  9671248 accaaatggtgggaccccttcccggaccctgcgtatgc 9671285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 10546232 - 10546269
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  10546232 accaaatggtgggaccccttcccggaccctgcgtatgc 10546269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 14444797 - 14444834
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  14444797 accaaatggtgggaccccttcccggaccctgcgtatgc 14444834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25249804 - 25249767
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||| |||||||||||||||||||||||    
T  25249804 accaaatggtgggatcccttcccgaaccctgcgtatgc 25249767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 10543772 - 10543806
Alignment:
Q  4 aaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    ||||||||||||||||||||| |||||||||||||    
T  10543772 aaatggtgggaccccttcccggaccctgcgtatgc 10543806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 23488555 - 23488589
Alignment:
Q  4 aaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    ||||||||||||||||||||| |||||||||||||    
T  23488555 aaatggtgggaccccttcccggaccctgcgtatgc 23488589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 26684683 - 26684649
Alignment:
Q  4 aaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    ||||||||||||| |||||||||||||||||||||    
T  26684683 aaatggtgggacctcttcccgaaccctgcgtatgc 26684649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 44643592 - 44643654
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaag-cttcgtgcaccgagctgcc 62  Q
    |||||||||||||||||||||||  ||||||||||||| | || ||| |||||||| ||||||    
T  44643592 accaaatggtgggaccccttcccagaccctgcgtatgcgggagccttagtgcaccgggctgcc 44643654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 4516417 - 4516372
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagctt 46  Q
    ||||| |||||||||||||||||| ||||||||||||  |||||||    
T  4516417 accaattggtgggaccccttcccggaccctgcgtatgtggaagctt 4516372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 14530393 - 14530426
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||| |||||||||||||    
T  14530393 aatggtgggaccccttcccggaccctgcgtatgc 14530426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 17623633 - 17623678
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagctt 46  Q
    |||||||||||| ||||||||||||| ||||||||||  |||||||    
T  17623633 accaaatggtggaaccccttcccgaatcctgcgtatgtggaagctt 17623678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 21779327 - 21779290
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  21779327 accaaatggtgggaccccttcccggaccctgcatatgc 21779290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 24890480 - 24890517
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  24890480 accaattggtgggaccccttcccggaccctgcgtatgc 24890517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 25079779 - 25079746
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||| |||||||||||||    
T  25079779 aatggtgggaccccttcccggaccctgcgtatgc 25079746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 25641570 - 25641607
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  25641570 accaaattgtgggaccccttcccgaatcctgcgtatgc 25641607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 32781354 - 32781301
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagcttcgtgcacc 54  Q
    |||||||||||||||||||||||  |||||| |||||| | ||||| |||||||    
T  32781354 accaaatggtgggaccccttcccagaccctgtgtatgcgggagctttgtgcacc 32781301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17896329 - 17896365
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatg 37  Q
    ||||||||||||||||||||| || ||||||||||||    
T  17896329 accaaatggtgggaccccttctcggaccctgcgtatg 17896365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5135355 - 5135294
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagcttcgtgcaccgagctgcc 62  Q
    |||||||||||||||||||||||| ||||||||||||| | ||||| |||||||| ||||||    
T  5135355 accaaatggtgggaccccttcccggaccctgcgtatgcaggagctttgtgcaccgggctgcc 5135294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 36720865 - 36720910
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagctt 46  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||    
T  36720865 accaaatggtgggaccccttcccggaccctgcgtatgcggaagctt 36720910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13160770 - 13160816
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagcttc 47  Q
    |||||||||||||||||||||||| ||||||||||||| | ||||||    
T  13160770 accaaatggtgggaccccttcccggaccctgcgtatgcgggagcttc 13160816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 24365125 - 24365071
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagcttcgtgcaccg 55  Q
    |||||||||||||||||||||||| ||||||||||||  | ||||| ||||||||    
T  24365125 accaaatggtgggaccccttcccggaccctgcgtatgtgggagctttgtgcaccg 24365071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 29877163 - 29877200
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  29877163 accaaatggtgggaccccttcccggaccctgcgtatgc 29877200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11001015 - 11000964
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagcttcgtgca 52  Q
    ||||||||||||||||||| |||||||||||  ||||| | |||||||||||    
T  11001015 accaaatggtgggacccctacccgaaccctgtttatgcaggagcttcgtgca 11000964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 38
Target Start/End: Original strand, 27507985 - 27508016
Alignment:
Q  7 tggtgggaccccttcccgaaccctgcgtatgc 38  Q
    ||||||||||||||||||||||||||||||||    
T  27507985 tggtgggaccccttcccgaaccctgcgtatgc 27508016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 45071333 - 45071388
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagcttc-gtgcaccg 55  Q
    |||||||||||||||||||||||| ||| ||||||||| | |||||| ||||||||    
T  45071333 accaaatggtgggaccccttcccggaccttgcgtatgcgggagcttcagtgcaccg 45071388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8897830 - 8897793
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  8897830 accaaatggtgggaccccttcccggaccctgcatatgc 8897793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 12625959 - 12625996
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  12625959 accaaatggtgggaccccctcccggaccctgcgtatgc 12625996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 12670316 - 12670279
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  12670316 accaaatggtgggaccccttcccggaccctgcatatgc 12670279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 17823645 - 17823682
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  17823645 accaaatggtggaaccccttcccgaaccctgcatatgc 17823682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 20284131 - 20284098
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||| |||||||||||||    
T  20284131 aatggtgggaccccttcccggaccctgcgtatgc 20284098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 21070759 - 21070726
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||| |||||||||||||    
T  21070759 aatggtgggaccccttcccggaccctgcgtatgc 21070726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 26102586 - 26102623
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  26102586 accaaatggtgggaccccttcccggaccctgcttatgc 26102623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28407472 - 28407509
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  28407472 accaaatggtgggaccccttcccggaccctacgtatgc 28407509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 28817688 - 28817655
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||| |||||||||||||    
T  28817688 aatggtgggaccccttcccggaccctgcgtatgc 28817655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 30454163 - 30454126
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  30454163 accaaatggtgggaccccttcccggaccctgcatatgc 30454126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 35261748 - 35261785
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||| | |||||||||||||    
T  35261748 accaaatggtgggaccccttcctggaccctgcgtatgc 35261785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 44530218 - 44530255
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||| | |||||||||||||    
T  44530218 accaaatggtgggaccccttcctggaccctgcgtatgc 44530255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 5689700 - 5689736
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatg 37  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  5689700 accaaatggtggaaccccttcccgaaccatgcgtatg 5689736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 17250937 - 17250905
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatg 37  Q
    ||||||||||||| |||||||||||||||||||    
T  17250937 aatggtgggaccctttcccgaaccctgcgtatg 17250905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 49796866 - 49796912
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagcttc 47  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||    
T  49796866 accaaatggtgggaccccttcccgaaccctgcgtatgcgggagcttc 49796912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 7909347 - 7909310
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7909347 accaaatggtgggaccccttcccgaaccctgcgtatgc 7909310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 5648327 - 5648373
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagcttc 47  Q
    |||||||||||||||||||||||| ||||||||||||| | ||||||    
T  5648327 accaaatggtgggaccccttcccggaccctgcgtatgcgggagcttc 5648373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 20908699 - 20908665
Alignment:
Q  4 aaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||||||||||||||    
T  20908699 aaatggtgggaccccttcccgaaccctgcgtatgc 20908665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 21489160 - 21489194
Alignment:
Q  4 aaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||||||||||||||    
T  21489160 aaatggtgggaccccttcccgaaccctgcgtatgc 21489194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 32478857 - 32478803
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagcttcgtgcaccg 55  Q
    |||||||||||||||||||||||| |||| |||||||| | ||||| ||||||||    
T  32478857 accaaatggtgggaccccttcccggacccagcgtatgcgggagctttgtgcaccg 32478803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 35567239 - 35567301
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagc-ttcgtgcaccgagctgcc 62  Q
    |||||||||||||||||||||||||||||||||| ||| | ||| || |||||||| ||||||    
T  35567239 accaaatggtgggaccccttcccgaaccctgcgtctgcgggagctttagtgcaccgggctgcc 35567301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25463191 - 25463244
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagcttcgtgcacc 54  Q
    |||||||||||||||||||||||| ||||||| ||||| | ||||| |||||||    
T  25463191 accaaatggtgggaccccttcccggaccctgcatatgcgggagctttgtgcacc 25463244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 54967089 - 54967150
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagcttcgtgcaccgagctgcc 62  Q
    |||||||||||||||||||||||| ||||| | ||||| | ||||| |||||||| ||||||    
T  54967089 accaaatggtgggaccccttcccgtaccctacatatgcgggagctttgtgcaccgggctgcc 54967150  T

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Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 5306730 - 5306694
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatg 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  5306730 accaaatggtgggaccccttcccggaccctgcgtatg 5306694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 40915897 - 40915952
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagcttc-gtgcaccg 55  Q
    |||||||||||||| ||||||||| ||||||||||||| | |||||| ||||||||    
T  40915897 accaaatggtgggagcccttcccggaccctgcgtatgcgggagcttcagtgcaccg 40915952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 47482913 - 47482854
Alignment:
Q  4 aaatggtgggaccccttcccgaaccctgcgtatgccgaagc-ttcgtgcaccgagctgcc 62  Q
    ||||||||||||||||||||| ||||||||||||| | ||| || ||||| |||||||||    
T  47482913 aaatggtgggaccccttcccggaccctgcgtatgcgggagctttggtgcaacgagctgcc 47482854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 14983906 - 14983940
Alignment:
Q  4 aaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    ||||||||||||||||||||| |||||||||||||    
T  14983906 aaatggtgggaccccttcccggaccctgcgtatgc 14983940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 20639721 - 20639687
Alignment:
Q  4 aaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    ||||||||||||||||||||| |||||||||||||    
T  20639721 aaatggtgggaccccttcccggaccctgcgtatgc 20639687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 44363193 - 44363159
Alignment:
Q  4 aaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    ||||||||||||||||||||| |||||||||||||    
T  44363193 aaatggtgggaccccttcccggaccctgcgtatgc 44363159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 47444026 - 47444072
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagcttc 47  Q
    |||||||||||||||||||||||| ||||||| ||||| | ||||||    
T  47444026 accaaatggtgggaccccttcccggaccctgcatatgcaggagcttc 47444072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 6430692 - 6430655
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  6430692 accaaatggtgggaccacttcccggaccctgcgtatgc 6430655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 9832379 - 9832342
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  9832379 accaaatggtgggaccccttcccggaccctgcatatgc 9832342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 20225051 - 20225088
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  20225051 accaaatggtgggaccccttcccggaccctgcatatgc 20225088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 25388249 - 25388282
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||| |||||||||||||    
T  25388249 aatggtgggaccccttcccggaccctgcgtatgc 25388282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 29207964 - 29207927
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  29207964 accaaatggtgggaccccttcccggaccctgcatatgc 29207927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 30690242 - 30690205
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  30690242 accaattggtgggaccccttcccggaccctgcgtatgc 30690205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 33836549 - 33836516
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||| |||||||||||||    
T  33836549 aatggtgggaccccttcccggaccctgcgtatgc 33836516  T

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Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 38755970 - 38755937
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||| |||||||||||||    
T  38755970 aatggtgggaccccttcccggaccctgcgtatgc 38755937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 38786678 - 38786715
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  38786678 accaaatggtgggaccccttcccggaccctgcatatgc 38786715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 51865104 - 51865067
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  51865104 accaaatggtggggccccttcccggaccctgcgtatgc 51865067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 48598891 - 48598847
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagct 45  Q
    |||||||||||||||||||||||| ||| ||| ||||||| ||||    
T  48598891 accaaatggtgggaccccttcccggaccatgcatatgccggagct 48598847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 24838 - 24801
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24838 accaaatggtgggaccccttcccgaaccctgcgtatgc 24801  T

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Target: scaffold0057; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 46900 - 46937
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  46900 accaaatggtgggaccccttcccggaccctgcgtatgc 46937  T

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Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24097646 - 24097691
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagctt 46  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||    
T  24097646 accaaatggtgggaccccttcccggaccctgcgtatgcggaagctt 24097691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3815143 - 3815098
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagctt 46  Q
    ||||||||||||||||| |||||||||||| ||||||| |||||||    
T  3815143 accaaatggtgggaccctttcccgaaccctacgtatgcggaagctt 3815098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 13267794 - 13267849
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagcttc-gtgcaccg 55  Q
    |||||||||||||||||||||| | ||||||||||||| | |||||| ||||||||    
T  13267794 accaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccg 13267849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 1347031 - 1347068
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  1347031 accaaatggtgggaccccttcccggaccctgcatatgc 1347068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 1354823 - 1354786
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  1354823 accaaatggtgggaccccttcccggaccctgcatatgc 1354786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 9161197 - 9161238
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatgccgaagctt 46  Q
    ||||||||||||||||| || ||||||||||||| |||||||    
T  9161197 aatggtgggaccccttctcggaccctgcgtatgcggaagctt 9161238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 11849126 - 11849159
Alignment:
Q  4 aaatggtgggaccccttcccgaaccctgcgtatg 37  Q
    |||||||||||||||||||||||| |||||||||    
T  11849126 aaatggtgggaccccttcccgaactctgcgtatg 11849159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 12221977 - 12221944
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||| |||||||||||||    
T  12221977 aatggtgggaccccttcccggaccctgcgtatgc 12221944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13905045 - 13904985
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagcttcgtgcaccgagctgcc 62  Q
    |||||||||||| |||| ||||||||||||||||||  || ||||| |||||||| ||||||    
T  13905045 accaaatggtgg-accctttcccgaaccctgcgtatcacggagctttgtgcaccgggctgcc 13904985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 15866105 - 15866072
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  15866105 accaaatggtgggaccccttcccggaccctgcgt 15866072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 29355917 - 29355884
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||| |||||||||||||    
T  29355917 aatggtgggaccccttcccggaccctgcgtatgc 29355884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7879707 - 7879762
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagcttc-gtgcaccg 55  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||| ||||||||    
T  7879707 accaaatggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcaccg 7879762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40463945 - 40464007
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagcttc-gtgcaccgagctgcc 62  Q
    ||||||||||||||||||||| || ||||||||||||| | |||||| |||||||||| ||||    
T  40463945 accaaatggtgggaccccttctcggaccctgcgtatgcgggagcttcagtgcaccgagttgcc 40464007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 13792215 - 13792154
Alignment:
Q  2 ccaaatggtgggaccccttcccgaaccctgcgtatgccgaagc-ttcgtgcaccgagctgcc 62  Q
    |||||||| ||||||||||| |||||||||||||||| | ||| || |||||||||||||||    
T  13792215 ccaaatggcgggaccccttctcgaaccctgcgtatgctggagcttttgtgcaccgagctgcc 13792154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 14099072 - 14099035
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||||||||| |||||||    
T  14099072 accaaatggtgggaccccttcccgaaccctacgtatgc 14099035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 14409089 - 14409052
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||||||||| |||||||    
T  14409089 accaaatggtgggaccccttcccgaaccctacgtatgc 14409052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21139814 - 21139769
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagctt 46  Q
    ||||||||||||||||||||||||||| ||| |||||| |||||||    
T  21139814 accaaatggtgggaccccttcccgaactctgtgtatgcggaagctt 21139769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 27889382 - 27889345
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  27889382 accaaatggtgggaccccttcccggaccctgcgtatgc 27889345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 1408528 - 1408563
Alignment:
Q  3 caaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||| |||||||||||||    
T  1408528 caaatggtgggaccccttcccggaccctgcgtatgc 1408563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 18747556 - 18747618
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagc-ttcgtgcaccgagctgcc 62  Q
    ||||| |||||||||||||||| ||||||||||||||| | ||| || |||||||| ||||||    
T  18747556 accaattggtgggaccccttcctgaaccctgcgtatgcgggagctttagtgcaccgggctgcc 18747618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 33500587 - 33500621
Alignment:
Q  4 aaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    ||||||||||||||||||||| |||||||||||||    
T  33500587 aaatggtgggaccccttcccggaccctgcgtatgc 33500621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 2541085 - 2541048
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  2541085 accaaatggtgggaccccttcccggtccctgcgtatgc 2541048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 10693139 - 10693102
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  10693139 accaaatggtgggaccccttcccggaccctgcatatgc 10693102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 11617654 - 11617617
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||| | |||||||||||||    
T  11617654 accaaatggtgggaccccttcctggaccctgcgtatgc 11617617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 18512515 - 18512482
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||| |||||||||||||    
T  18512515 aatggtgggaccccttcccggaccctgcgtatgc 18512482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 21172075 - 21172038
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  21172075 accaaatggtgggaccccttcccggaccctgcatatgc 21172038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 23231630 - 23231663
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||| |||||||||||||||||||||||||||||    
T  23231630 aatgatgggaccccttcccgaaccctgcgtatgc 23231663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 28078198 - 28078161
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  28078198 accaaatggtgggaccccttcccgaatcctgcatatgc 28078161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 32758328 - 32758365
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  32758328 accaaatggtgggaccccttcccggaccctgcatatgc 32758365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 34626274 - 34626237
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  34626274 accaaatggtgggatcccttcccggaccctgcgtatgc 34626237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 35334878 - 35334845
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||| |||||||||||||    
T  35334878 aatggtgggaccccttcccggaccctgcgtatgc 35334845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 38262262 - 38262225
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  38262262 accaaatgatgggaccccttcccgaacactgcgtatgc 38262225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 39123967 - 39124000
Alignment:
Q  4 aaatggtgggaccccttcccgaaccctgcgtatg 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  39123967 aaatggtgggaccccttcccggaccctgcgtatg 39124000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 42391166 - 42391129
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  42391166 accaaatggtgggaccccttcccggaccctgcatatgc 42391129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 48735188 - 48735151
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  48735188 accaaatggtgggaccccttcccggaccctgcatatgc 48735151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13805170 - 13805222
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagcttcgtgcac 53  Q
    |||||||||||||||| ||||| | ||||||||||||| | ||||| ||||||    
T  13805170 accaaatggtgggaccacttcctggaccctgcgtatgcgggagctttgtgcac 13805222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 829505 - 829471
Alignment:
Q  4 aaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||||||||||||||    
T  829505 aaatggtgggaccccttcccgaaccctgcgtatgc 829471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 40272878 - 40272841
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  40272878 accaaatggtgggaccccttcccggaccctgcgtatgc 40272841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 54484782 - 54484819
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  54484782 accaaatggtgggaccccttcccggaccctgcgtatgc 54484819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 45416986 - 45416938
Alignment:
Q  14 accccttcccgaaccctgcgtatgccgaagcttcgtgcaccgagctgcc 62  Q
    ||||||||||| ||||||||||||| ||||||| |||||||| ||||||    
T  45416986 accccttcccggaccctgcgtatgcagaagctttgtgcaccgggctgcc 45416938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 22609856 - 22609911
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagcttc-gtgcaccg 55  Q
    |||||||||||||||||||||||| ||| ||||||||| | |||||| ||||||||    
T  22609856 accaaatggtgggaccccttcccggaccttgcgtatgcgggagcttcagtgcaccg 22609911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 44403618 - 44403559
Alignment:
Q  4 aaatggtgggaccccttcccgaaccctgcgtatgccgaagc-ttcgtgcaccgagctgcc 62  Q
    ||||||||||||||||||||| ||||| ||||||| ||||| || |||||||| ||||||    
T  44403618 aaatggtgggaccccttcccggaccctacgtatgctgaagctttagtgcaccgggctgcc 44403559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 16735531 - 16735577
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagcttc 47  Q
    |||||||||||||||||||||||| || |||||||||| | ||||||    
T  16735531 accaaatggtgggaccccttcccggacactgcgtatgcggtagcttc 16735577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34771430 - 34771368
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgccgaagct-tcgtgcaccgagctgcc 62  Q
    |||||||||||||||||||||||| ||||||| ||||| | |||| | |||||||| ||||||    
T  34771430 accaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggctgcc 34771368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 13628852 - 13628819
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||| |||||||||||||    
T  13628852 aatggtgggaccccttcccggaccctgcgtatgc 13628819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 22122983 - 22122946
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  22122983 accaaatggtgggaccccttcccggaccctgcatatgc 22122946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 46421097 - 46421064
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||| |||||||||||||    
T  46421097 aatggtgggaccccttcccggaccctgcgtatgc 46421064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 52926285 - 52926248
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  52926285 accaaatggtgggacaccttcccggaccctgcgtatgc 52926248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 15797311 - 15797347
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatg 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  15797311 accaaatggtgggaccccttcccggaccctgcatatg 15797347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 29366782 - 29366750
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatg 37  Q
    |||||||||||||||||||| ||||||||||||    
T  29366782 aatggtgggaccccttcccggaccctgcgtatg 29366750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 10879 - 10916
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  10879 accaaatggtgggaccccttcccggaccctgcgtatgc 10916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000006; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 7097826 - 7097789
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  7097826 accaaatggtgagaccccttcccgaaccctgcgtatgc 7097789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 16957383 - 16957420
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  16957383 accaaatggtgggaccccttcccggaccctgcgtatgc 16957420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 24448959 - 24448996
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  24448959 accaaatggtgggaccccttcccggaccctgcgtatgc 24448996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 27328827 - 27328860
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    ||||||||||||||||||||||||||||||||||    
T  27328827 aatggtgggaccccttcccgaaccctgcgtatgc 27328860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 43574675 - 43574712
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  43574675 accaaatggtgggaccccttcccggaccctgcgtatgc 43574712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 37226024 - 37225989
Alignment:
Q  4 aaatggtgggaccccttcccgaaccctgcgtatgcc 39  Q
    ||||||||||||||||||||||||| ||||||||||    
T  37226024 aaatggtgggaccccttcccgaaccatgcgtatgcc 37225989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 10306537 - 10306503
Alignment:
Q  4 aaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    ||||||||||||||||||||| |||||||||||||    
T  10306537 aaatggtgggaccccttcccggaccctgcgtatgc 10306503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8170050 - 8170013
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  8170050 accaaatggtgggaccccttcccggaccctgcatatgc 8170013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 19143009 - 19142972
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  19143009 accaaatggtgggaccccttcccggaccatgcgtatgc 19142972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 25622533 - 25622566
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||| |||||||||||||    
T  25622533 aatggtgggaccccttcccggaccctgcgtatgc 25622566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 32703491 - 32703528
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  32703491 accaaatggtgggaccccttcccggaccctgcatatgc 32703528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 34154880 - 34154843
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  34154880 accaaatggtgggaccccttcccggaccctgcatatgc 34154843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 38879656 - 38879689
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||| |||||||||||||    
T  38879656 aatggtgggaccccttcccggaccctgcgtatgc 38879689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 11657762 - 11657734
Alignment:
Q  4 aaatggtgggaccccttcccgaaccctgc 32  Q
    |||||||||||||||||||||||||||||    
T  11657762 aaatggtgggaccccttcccgaaccctgc 11657734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 21542532 - 21542496
Alignment:
Q  2 ccaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    ||||||||||||||||||||||| || ||||||||||    
T  21542532 ccaaatggtgggaccccttcccggactctgcgtatgc 21542496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 3617 - 3650
Alignment:
Q  5 aatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||| |||||||||||||||||||||||||||||    
T  3617 aatgatgggaccccttcccgaaccctgcgtatgc 3650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 24199 - 24162
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  24199 accaaatggtgggaccccttcccggaccctgcatatgc 24162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 30646 - 30683
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  30646 accaaatggtgggaccccttcccggaccctgcatatgc 30683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 48700 - 48663
Alignment:
Q  1 accaaatggtgggaccccttcccgaaccctgcgtatgc 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  48700 accaaatggtgggaccccttcccggaccctgcatatgc 48663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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