View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7437_high_2 (Length: 226)
Name: NF7437_high_2
Description: NF7437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7437_high_2 |
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Alignment Details
Target: chr6 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 32953422 - 32953318
Alignment:
| Q |
9 |
tcgaagaaaatgatggcagaaaaaacttacttttcaatcatacaataatccaaagccaatcccttagataaaggtgaatgaaagaatcaaaacaacacct |
108 |
Q |
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| T |
32953422 |
tcgaacaaagtgatgacagaaaaaacttacttttcaatcatacaataatccaaagccaaacccttagataaaggtgaatgaaagaatcaaaacaacacct |
32953323 |
T |
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| Q |
109 |
aattg |
113 |
Q |
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||||| |
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| T |
32953322 |
aattg |
32953318 |
T |
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Target: chr5 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 182
Target Start/End: Complemental strand, 21608551 - 21608516
Alignment:
| Q |
147 |
tctgcaaacgtcgttaagaacaaacgtcagcaatca |
182 |
Q |
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| T |
21608551 |
tctgcaaacgtcgttaaaaacaaacgtcagcaatca |
21608516 |
T |
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