View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7439_high_23 (Length: 229)

Name: NF7439_high_23
Description: NF7439
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7439_high_23
NF7439_high_23
[»] chr5 (41 HSPs)
chr5 (11-220)||(20515286-20515496)
chr5 (11-116)||(35040870-35040976)
chr5 (11-115)||(36197564-36197669)
chr5 (11-116)||(35041402-35041508)
chr5 (13-115)||(19134645-19134748)
chr5 (11-116)||(35041621-35041727)
chr5 (11-220)||(4727853-4728064)
chr5 (11-220)||(1349540-1349751)
chr5 (11-220)||(6429486-6429698)
chr5 (56-220)||(35040403-35040568)
chr5 (18-115)||(35040047-35040145)
chr5 (11-116)||(35781708-35781814)
chr5 (11-99)||(2211351-2211440)
chr5 (11-216)||(5246400-5246605)
chr5 (11-114)||(34383265-34383369)
chr5 (11-116)||(40591196-40591306)
chr5 (13-116)||(38184179-38184283)
chr5 (13-116)||(38214074-38214178)
chr5 (56-116)||(35781300-35781360)
chr5 (56-220)||(12545884-12546049)
chr5 (11-116)||(5249236-5249341)
chr5 (11-116)||(28793888-28793993)
chr5 (11-116)||(35041256-35041362)
chr5 (43-113)||(6538136-6538206)
chr5 (15-112)||(17367600-17367698)
chr5 (56-116)||(17342414-17342474)
chr5 (11-100)||(38494379-38494470)
chr5 (11-113)||(19950619-19950725)
chr5 (43-113)||(1349160-1349230)
chr5 (174-220)||(19135067-19135113)
chr5 (174-220)||(25458523-25458569)
chr5 (63-112)||(994264-994313)
chr5 (11-61)||(25458343-25458394)
chr5 (11-113)||(27124205-27124307)
chr5 (55-114)||(35781836-35781895)
chr5 (174-220)||(19134809-19134855)
chr5 (43-116)||(26790122-26790198)
chr5 (11-100)||(30054586-30054675)
chr5 (11-67)||(35041908-35041965)
chr5 (174-214)||(35781418-35781458)
chr5 (43-75)||(36852694-36852726)
[»] chr2 (38 HSPs)
chr2 (43-220)||(1826676-1826852)
chr2 (11-115)||(14787086-14787191)
chr2 (11-114)||(24545734-24545838)
chr2 (11-166)||(31667398-31667555)
chr2 (13-220)||(42676353-42676561)
chr2 (11-114)||(15458831-15458935)
chr2 (56-220)||(40662747-40662910)
chr2 (11-114)||(36950433-36950537)
chr2 (15-116)||(37201541-37201643)
chr2 (11-89)||(38722737-38722816)
chr2 (11-116)||(21479292-21479398)
chr2 (11-100)||(34454001-34454091)
chr2 (11-116)||(9420143-9420249)
chr2 (47-218)||(3256024-3256198)
chr2 (56-116)||(7074992-7075052)
chr2 (56-116)||(41347403-41347463)
chr2 (11-89)||(11667089-11667168)
chr2 (11-113)||(43004798-43004901)
chr2 (15-113)||(13222371-13222468)
chr2 (11-99)||(18297007-18297096)
chr2 (49-115)||(44822104-44822170)
chr2 (11-90)||(30620491-30620571)
chr2 (11-90)||(30623112-30623192)
chr2 (56-114)||(21479139-21479197)
chr2 (174-220)||(30668894-30668940)
chr2 (11-100)||(9977805-9977899)
chr2 (56-115)||(43968661-43968720)
chr2 (174-220)||(30620603-30620649)
chr2 (174-220)||(30623224-30623270)
chr2 (174-220)||(43004948-43004994)
chr2 (43-100)||(1951680-1951737)
chr2 (56-116)||(7495517-7495577)
chr2 (174-214)||(43968562-43968602)
chr2 (43-162)||(559431-559553)
chr2 (43-90)||(30632174-30632221)
chr2 (11-65)||(43968330-43968384)
chr2 (174-216)||(30666311-30666353)
chr2 (46-112)||(42679525-42679591)
[»] chr8 (46 HSPs)
chr8 (11-220)||(27882446-27882656)
chr8 (11-220)||(28022626-28022836)
chr8 (11-220)||(35308133-35308345)
chr8 (11-220)||(6007557-6007767)
chr8 (11-116)||(5764766-5764872)
chr8 (11-115)||(1153766-1153871)
chr8 (11-216)||(15199615-15199821)
chr8 (11-114)||(339738-339842)
chr8 (43-218)||(28828029-28828206)
chr8 (11-220)||(17072976-17073187)
chr8 (11-220)||(17575083-17575294)
chr8 (5-115)||(24981386-24981497)
chr8 (55-220)||(5424701-5424867)
chr8 (29-214)||(13916436-13916622)
chr8 (43-220)||(1030299-1030476)
chr8 (11-113)||(11464593-11464696)
chr8 (11-100)||(4443860-4443951)
chr8 (19-100)||(18947003-18947085)
chr8 (55-116)||(6007959-6008020)
chr8 (5-112)||(32795264-32795371)
chr8 (43-115)||(40737344-40737416)
chr8 (11-209)||(27964698-27964899)
chr8 (55-116)||(5765472-5765533)
chr8 (43-115)||(342782-342854)
chr8 (11-74)||(27965810-27965874)
chr8 (56-115)||(5424588-5424647)
chr8 (19-116)||(18969454-18969550)
chr8 (174-220)||(1153692-1153738)
chr8 (129-220)||(27965083-27965174)
chr8 (66-115)||(27965200-27965249)
chr8 (56-100)||(40796298-40796342)
chr8 (19-116)||(18969854-18969952)
chr8 (43-111)||(17073204-17073273)
chr8 (43-111)||(17574997-17575066)
chr8 (175-220)||(40796176-40796221)
chr8 (59-209)||(28022294-28022444)
chr8 (174-220)||(17073336-17073382)
chr8 (174-220)||(17574888-17574934)
chr8 (59-209)||(27882113-27882264)
chr8 (174-220)||(27964004-27964050)
chr8 (68-113)||(5765157-5765202)
chr8 (12-94)||(28152350-28152434)
chr8 (56-116)||(27881244-27881304)
chr8 (56-116)||(28021425-28021485)
chr8 (56-116)||(33489443-33489502)
chr8 (175-215)||(45183003-45183043)
[»] chr1 (54 HSPs)
chr1 (11-220)||(43114956-43115165)
chr1 (11-220)||(6844347-6844557)
chr1 (11-220)||(33674864-33675074)
chr1 (11-115)||(33240964-33241069)
chr1 (13-214)||(6318792-6318997)
chr1 (5-116)||(17054106-17054217)
chr1 (11-220)||(24686074-24686287)
chr1 (11-220)||(43325954-43326164)
chr1 (11-113)||(11981597-11981700)
chr1 (11-112)||(10065992-10066094)
chr1 (11-116)||(39842677-39842783)
chr1 (5-115)||(47795536-47795646)
chr1 (24-220)||(48738392-48738589)
chr1 (11-116)||(42429477-42429583)
chr1 (11-115)||(46675797-46675902)
chr1 (12-116)||(52404276-52404381)
chr1 (11-114)||(47795820-47795924)
chr1 (11-111)||(6614366-6614467)
chr1 (11-99)||(47794712-47794801)
chr1 (11-100)||(33813378-33813468)
chr1 (11-100)||(33872848-33872938)
chr1 (11-100)||(47793206-47793296)
chr1 (55-115)||(47796216-47796276)
chr1 (56-114)||(42834716-42834774)
chr1 (47-113)||(47795160-47795226)
chr1 (56-113)||(43114676-43114733)
chr1 (56-116)||(6941284-6941344)
chr1 (47-115)||(6941704-6941772)
chr1 (5-68)||(10338307-10338371)
chr1 (56-116)||(24705332-24705392)
chr1 (56-116)||(47796592-47796652)
chr1 (56-220)||(42834839-42835001)
chr1 (11-115)||(45807871-45807970)
chr1 (56-220)||(49480238-49480401)
chr1 (56-100)||(7561988-7562032)
chr1 (11-216)||(49243665-49243869)
chr1 (57-116)||(11982093-11982152)
chr1 (53-100)||(47882240-47882287)
chr1 (174-220)||(39842813-39842859)
chr1 (174-220)||(47793122-47793168)
chr1 (174-220)||(47795054-47795100)
chr1 (51-115)||(8795480-8795545)
chr1 (56-111)||(15597608-15597663)
chr1 (56-115)||(45296873-45296932)
chr1 (174-220)||(12016892-12016938)
chr1 (174-220)||(17054275-17054321)
chr1 (174-220)||(24705412-24705458)
chr1 (174-220)||(47795431-47795477)
chr1 (174-220)||(47795984-47796030)
chr1 (174-220)||(52404167-52404213)
chr1 (11-67)||(6319170-6319227)
chr1 (175-220)||(45296767-45296812)
chr1 (56-116)||(7561868-7561928)
chr1 (47-95)||(45378256-45378304)
[»] chr7 (59 HSPs)
chr7 (5-220)||(44434679-44434896)
chr7 (11-116)||(33858098-33858205)
chr7 (11-116)||(1644419-1644525)
chr7 (11-213)||(4399545-4399748)
chr7 (11-212)||(24689225-24689428)
chr7 (11-100)||(15640253-15640343)
chr7 (12-116)||(15641094-15641199)
chr7 (11-113)||(14312563-14312665)
chr7 (43-220)||(26246625-26246802)
chr7 (11-112)||(26970604-26970707)
chr7 (56-220)||(30121915-30122079)
chr7 (43-114)||(37986099-37986170)
chr7 (11-100)||(10282797-10282887)
chr7 (11-116)||(28974827-28974933)
chr7 (11-115)||(45447681-45447786)
chr7 (47-192)||(5801069-5801215)
chr7 (11-86)||(47222639-47222715)
chr7 (11-116)||(23809035-23809141)
chr7 (56-116)||(10282582-10282642)
chr7 (13-116)||(21696893-21696997)
chr7 (46-116)||(24689636-24689706)
chr7 (11-100)||(29102562-29102652)
chr7 (56-113)||(24162279-24162336)
chr7 (11-86)||(30122270-30122346)
chr7 (11-98)||(35526365-35526452)
chr7 (56-115)||(4594609-4594668)
chr7 (56-220)||(23640754-23640917)
chr7 (11-100)||(26127835-26127925)
chr7 (55-116)||(24688889-24688950)
chr7 (60-113)||(35527399-35527452)
chr7 (55-111)||(11749971-11750027)
chr7 (56-116)||(31277359-31277419)
chr7 (11-116)||(12216854-12216960)
chr7 (11-100)||(10282989-10283079)
chr7 (27-83)||(19611043-19611100)
chr7 (19-90)||(16174944-16175016)
chr7 (56-116)||(29854599-29854659)
chr7 (49-100)||(5373052-5373103)
chr7 (11-65)||(22644714-22644769)
chr7 (174-220)||(30121320-30121366)
chr7 (43-85)||(40261849-40261891)
chr7 (78-115)||(30122130-30122167)
chr7 (72-116)||(10282911-10282955)
chr7 (11-86)||(26178160-26178236)
chr7 (56-96)||(35223717-35223757)
chr7 (19-109)||(1304711-1304802)
chr7 (174-217)||(47222539-47222582)
chr7 (174-216)||(21696520-21696562)
chr7 (174-220)||(24688785-24688831)
chr7 (174-220)||(26970413-26970459)
chr7 (174-220)||(26970771-26970817)
chr7 (73-115)||(27756402-27756444)
chr7 (174-220)||(38319993-38320039)
chr7 (11-43)||(15641659-15641691)
chr7 (53-109)||(18989422-18989477)
chr7 (53-109)||(18999236-18999291)
chr7 (43-116)||(29834498-29834573)
chr7 (84-116)||(30121231-30121263)
chr7 (11-66)||(35526765-35526821)
[»] chr4 (50 HSPs)
chr4 (11-220)||(7238888-7239098)
chr4 (11-220)||(54175721-54175930)
chr4 (11-220)||(19298513-19298725)
chr4 (11-116)||(27839065-27839171)
chr4 (11-116)||(54806949-54807055)
chr4 (11-115)||(32500147-32500252)
chr4 (12-116)||(2494182-2494285)
chr4 (11-112)||(9518909-9519011)
chr4 (11-220)||(5028972-5029182)
chr4 (11-101)||(39136149-39136240)
chr4 (11-116)||(7070580-7070686)
chr4 (11-116)||(36889774-36889880)
chr4 (43-113)||(39476335-39476405)
chr4 (11-116)||(43495711-43495817)
chr4 (56-220)||(44886104-44886268)
chr4 (11-113)||(12928436-12928539)
chr4 (56-220)||(50715607-50715772)
chr4 (11-115)||(660054-660159)
chr4 (11-115)||(41692319-41692424)
chr4 (11-113)||(49866991-49867094)
chr4 (43-220)||(49897351-49897528)
chr4 (11-84)||(16877065-16877139)
chr4 (11-100)||(45032322-45032412)
chr4 (56-215)||(13222114-13222272)
chr4 (11-99)||(36638694-36638782)
chr4 (11-110)||(53140146-53140245)
chr4 (43-116)||(37243551-37243623)
chr4 (56-113)||(42816080-42816137)
chr4 (56-116)||(41103931-41103991)
chr4 (56-116)||(46255132-46255192)
chr4 (174-220)||(33802970-33803016)
chr4 (19-116)||(37813147-37813244)
chr4 (56-116)||(24739169-24739228)
chr4 (17-116)||(42314524-42314626)
chr4 (174-220)||(9519069-9519115)
chr4 (11-112)||(40796201-40796303)
chr4 (174-220)||(41104048-41104094)
chr4 (174-220)||(41692483-41692529)
chr4 (175-220)||(29100876-29100921)
chr4 (176-220)||(49867154-49867198)
chr4 (174-220)||(39136054-39136100)
chr4 (19-116)||(40956788-40956886)
chr4 (11-67)||(42746904-42746957)
chr4 (19-75)||(10117967-10118024)
chr4 (56-113)||(16435986-16436043)
chr4 (175-220)||(42815966-42816011)
chr4 (175-220)||(43495883-43495928)
chr4 (174-218)||(2494077-2494121)
chr4 (56-116)||(29100754-29100814)
chr4 (71-115)||(29993513-29993557)
[»] scaffold0016 (3 HSPs)
scaffold0016 (11-115)||(205132-205236)
scaffold0016 (56-220)||(106069-106233)
scaffold0016 (174-220)||(205294-205340)
[»] chr6 (17 HSPs)
chr6 (11-113)||(7204909-7205012)
chr6 (11-166)||(14094108-14094262)
chr6 (18-220)||(2258698-2258901)
chr6 (11-220)||(21980793-21981003)
chr6 (1-112)||(21091888-21091999)
chr6 (11-116)||(26001350-26001452)
chr6 (11-216)||(33438550-33438755)
chr6 (43-116)||(3307444-3307517)
chr6 (47-115)||(24006968-24007036)
chr6 (5-105)||(20609409-20609512)
chr6 (57-116)||(20469424-20469484)
chr6 (174-220)||(7204795-7204841)
chr6 (55-113)||(26209052-26209110)
chr6 (175-216)||(3306977-3307018)
chr6 (11-51)||(20469476-20469516)
chr6 (47-98)||(26277564-26277615)
chr6 (19-95)||(12203011-12203088)
[»] chr3 (51 HSPs)
chr3 (11-220)||(54356154-54356365)
chr3 (5-116)||(10332980-10333093)
chr3 (11-220)||(8707904-8708114)
chr3 (11-220)||(9059791-9060001)
chr3 (11-220)||(21388411-21388621)
chr3 (11-115)||(16106122-16106227)
chr3 (11-115)||(34795136-34795241)
chr3 (15-115)||(11632953-11633054)
chr3 (12-115)||(40285138-40285242)
chr3 (11-116)||(26863122-26863228)
chr3 (11-115)||(7433696-7433801)
chr3 (11-113)||(24485692-24485796)
chr3 (12-212)||(26167886-26168088)
chr3 (17-115)||(30917638-30917737)
chr3 (17-115)||(47567855-47567954)
chr3 (56-116)||(54981701-54981761)
chr3 (11-113)||(12100948-12101051)
chr3 (52-111)||(54981816-54981875)
chr3 (12-116)||(3942673-3942775)
chr3 (11-100)||(23027660-23027750)
chr3 (12-100)||(45585980-45586069)
chr3 (5-116)||(21459491-21459606)
chr3 (13-100)||(44869073-44869161)
chr3 (43-114)||(23027884-23027955)
chr3 (129-216)||(54585828-54585915)
chr3 (56-113)||(27245896-27245953)
chr3 (11-113)||(26760452-26760555)
chr3 (68-220)||(10297198-10297350)
chr3 (174-220)||(23027581-23027627)
chr3 (68-220)||(10332676-10332825)
chr3 (11-74)||(44077887-44077951)
chr3 (61-100)||(40459609-40459648)
chr3 (57-111)||(3901657-3901711)
chr3 (11-112)||(46514893-46514984)
chr3 (179-220)||(7335646-7335687)
chr3 (19-75)||(14900475-14900532)
chr3 (24-76)||(25250441-25250494)
chr3 (175-214)||(11633115-11633154)
chr3 (2-111)||(27943057-27943168)
chr3 (174-220)||(10297463-10297509)
chr3 (174-220)||(10317036-10317082)
chr3 (174-220)||(10317281-10317327)
chr3 (174-220)||(10333151-10333197)
chr3 (174-220)||(24842473-24842519)
chr3 (65-115)||(33832745-33832795)
chr3 (174-220)||(44077791-44077837)
chr3 (174-220)||(54981937-54981983)
chr3 (68-100)||(30498579-30498611)
chr3 (174-218)||(40285036-40285080)
chr3 (176-220)||(46515077-46515121)
chr3 (178-218)||(53877695-53877735)
[»] scaffold0376 (1 HSPs)
scaffold0376 (50-114)||(2046-2110)
[»] scaffold0224 (2 HSPs)
scaffold0224 (56-114)||(21797-21855)
scaffold0224 (56-220)||(21920-22082)
[»] scaffold0006 (1 HSPs)
scaffold0006 (11-100)||(71485-71575)
[»] scaffold0024 (1 HSPs)
scaffold0024 (177-220)||(150188-150231)
[»] scaffold0625 (1 HSPs)
scaffold0625 (53-109)||(7284-7339)


Alignment Details
Target: chr5 (Bit Score: 101; Significance: 3e-50; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 20515496 - 20515286
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||| |||    
T  20515496 attaaaataaaagtgattttgacataaaataatttagagattattttttagagattttataaaaaatcaaaatctattttgcgtttgtttagcgtagtaa 20515397  T
Q  110 aaatcacnnnnnnnaaaagataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatatttt 209  Q
    |||||||        ||| |||||||| ||||||||||  ||||| |||||||||||       |||||||||||||||||||||||| || ||||||||    
T  20515396 aaatcactttttattaaaaataatttagtttgtttggaaacagctatataaaagcgattttattgttacaaaattagttcaatctttagatccatatttt 20515297  T
Q  210 ctctctcctct 220  Q
    || ||||||||    
T  20515296 ctttctcctct 20515286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 35040870 - 35040976
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  35040870 attaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgcgtttgtttaccgtaataa 35040969  T
Q  110 aaatcac 116  Q
    |||||||    
T  35040970 aaatcac 35040976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 36197564 - 36197669
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||| ||||||||| |||||| ||||||||    
T  36197564 attaaaataaaaatgattttgacataaaataatttagagattattttttagagattttatgaaaaatcagaatcaattttgcgtctgtttaccgtaataa 36197663  T
Q  110 aaatca 115  Q
    ||||||    
T  36197664 aaatca 36197669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 35041508 - 35041402
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||  |||||||    
T  35041508 attaaaataaaaatgattttgccataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgcgtttgtttactgtaataa 35041409  T
Q  110 aaatcac 116  Q
    |||||||    
T  35041408 aaatcac 35041402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 115
Target Start/End: Original strand, 19134645 - 19134748
Alignment:
Q  13 taaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaa 111  Q
    |||||||||| ||||||| |||||| |||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  19134645 taaaataaaagtgattttcacataaaataatttagagattatattttagagattttatgaaaaatcaaaatctattttgcgtttgtttaacataataaaa 19134744  T
Q  112 atca 115  Q
    ||||    
T  19134745 atca 19134748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 35041727 - 35041621
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||| |||||||||| ||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||| ||| ||||    
T  35041727 attaaaataaaagtgattttgacgtaagataatttagagattatattttagagattttatgtaaaatcagaatctattttgcgtttgtttaccgtgataa 35041628  T
Q  110 aaatcac 116  Q
    |||||||    
T  35041627 aaatcac 35041621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 4728064 - 4727853
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| ||||||||| |||| |||||| |||| |||| ||||||||||| |||||||||||| |||||||||||||||||||||  |||||||    
T  4728064 attaaaataaaagtgattttgatataaaataatttagagtttatattttagagattatatgaaaaatcagaatctattttgcgtttgtttactgtaataa 4727965  T
Q  110 aaatcacnnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattt 208  Q
    |||||||       ||| | ||||| || |||||||| || || || |||||||| ||       ||||||||||||||||| ||||| || | ||||||    
T  4727964 aaatcaccttttttaaacaaataatctagtttgtttgaatacaactatataaaagggatttgtttgttacaaaattagttcattcttttaaattatattt 4727865  T
Q  209 tctctctcctct 220  Q
    ||||||||||||    
T  4727864 tctctctcctct 4727853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 1349540 - 1349751
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcg-tttgtttaacgtaata 108  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| ||||||||| ||||| |||| ||| ||||||||||||| ||||||||  ||||||    
T  1349540 attaaaataaaagtgattttgacataaaataatttagagattatattttagagactttataaaaactcagaatctattttgcgttttgtttactgtaata 1349639  T
Q  109 aaaatcacnnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatatt 207  Q
    |||||||        ||| | ||||| || ||||||||||| || || |||||||| ||       ||||||||||||||||||||||| || |||||||    
T  1349640 aaaatcatttttttaaaacaaataatctagtttgtttggatacaactatataaaaggga-ttttttgttacaaaattagttcaatcttttaaatcatatt 1349738  T
Q  208 ttctctctcctct 220  Q
    |||||||||||||    
T  1349739 ttctctctcctct 1349751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 6429698 - 6429486
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||| |   | ||    
T  6429698 attaaaataaaaatgattttcacataaaataatttagagattattttttaaagaatttatgaaaaattataatctattttgcgtttgtttacctggacaa 6429599  T
Q  110 aaatca--cnnnnnnnaaaagataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatatt 207  Q
    ||||||           ||| |||||||| |||||| |||| || || ||||||| |||       |||||||||||||||||||||||  || ||||||    
T  6429598 aaatcatttttttttttaaaaataatttagtttgttaggatacaactatataaaaacgatatttttgttacaaaattagttcaatcttttgatccatatt 6429499  T
Q  208 ttctctctcctct 220  Q
    |||||||||||||    
T  6429498 ttctctctcctct 6429486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 35040568 - 35040403
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcacnnnnnnnaaa-agataatttaatttgtttggatccagct 154  Q
    ||||| |||||||| |||||||| ||||||||||||||||||||| |||||||||||||||       ||| | |||||||| ||||||||||| || ||    
T  35040568 tttagcgattttataaaaaatcagaatctattttgcgtttgtttaccgtaataaaaatcacgttttttaaacaaataatttagtttgtttggatacaact 35040469  T
Q  155 gtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
     |||||||| ||       ||||||||||||||||||||||| || |||||||||||| |||||||    
T  35040468 atataaaagggaattttttgttacaaaattagttcaatcttttaaatcatattttctccctcctct 35040403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 35040047 - 35040145
Alignment:
Q  18 taaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatca 115  Q
    ||||| ||||||||| |||| |||||| ||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  35040047 taaaagtgattttgatataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgtgtttgtttaccgtaataaaaatca 35040145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 35781814 - 35781708
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| |||||||| |||| |||||||||| |||||||||| |||||||||| ||||| ||    
T  35781814 attaaaataaaagtgattttgacataaaataatttagagattatattttagaggttttgtgaaaaatcagaatctattttacgtttgtttaccgtaacaa 35781715  T
Q  110 aaatcac 116  Q
    |||||||    
T  35781714 aaatcac 35781708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 2211440 - 2211351
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgttt 99  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||||||||| |||||||||    
T  2211440 attaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttacgtttgttt 2211351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 216
Target Start/End: Original strand, 5246400 - 5246605
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||||| |||||||||||| |||||| ||||||| | ||||| |||||| ||||||||||| ||||||||||| ||||||||| ||||||||    
T  5246400 attaaaataaaaataattttgacataaaataatttagagattgtattttatagattt-atgaaaaatcagaatctattttgtgtttgtttatcgtaataa 5246498  T
Q  110 aaatcacnnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattt 208  Q
    |||||||       ||| | |||||||| ||||||||||| || || |||||||| ||        |||||||||||||||||||||| ||  | |||||    
T  5246499 aaatcacttattttaaacaaataatttagtttgtttggatacaactatataaaagagattttttt-ttacaaaattagttcaatcttttaaaccttattt 5246597  T
Q  209 tctctctc 216  Q
    ||||||||    
T  5246598 tctctctc 5246605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 34383265 - 34383369
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaa-tcataatctattttgcgtttgtttaacgtaata 108  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||  ||||||    
T  34383265 attaaaataaaagtgattttgacataaaataatttagagattattttt-agagattttatgaaaaaatcagaatctattttgcgtttgtttagtgtaata 34383363  T
Q  109 aaaatc 114  Q
    ||||||    
T  34383364 aaaatc 34383369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 40591196 - 40591306
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgc----gtttgtttaacgta 105  Q
    |||||||||||| ||||||||||||||  ||||| ||||||||| |||||||||||||||||||||||| ||| ||||||||    ||||||||||||||    
T  40591196 attaaaataaaagtgattttgacataaattaatttagagattatattttagagattttatgaaaaatcagaatttattttgcgtttgtttgtttaacgta 40591295  T
Q  106 ataaaaatcac 116  Q
    |||||||||||    
T  40591296 ataaaaatcac 40591306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 116
Target Start/End: Original strand, 38184179 - 38184283
Alignment:
Q  13 taaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaa 111  Q
    |||||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||| | ||| |||||| |||||||||| | ||| ||||    
T  38184179 taaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaattagaatttattttccgtttgtttaccataagaaaa 38184278  T
Q  112 atcac 116  Q
    |||||    
T  38184279 atcac 38184283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 38214178 - 38214074
Alignment:
Q  13 taaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaa 111  Q
    |||||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||| | ||| |||||| |||||||||| | ||| ||||    
T  38214178 taaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaattagaatttattttccgtttgtttaccataagaaaa 38214079  T
Q  112 atcac 116  Q
    |||||    
T  38214078 atcac 38214074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 35781300 - 35781360
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  35781300 tttagagattttatgaaaaatcaaaatctattttgcgtttgtttaccgtaataaaaatcac 35781360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 12546049 - 12545884
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcacnnnnnnnaaa-agataatttaatttgtttggatccagct 154  Q
    |||||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||||||        ||| | |||||||| ||||||||||| || |     
T  12546049 tttagagattgtatgaaaaatcagaatctattttgtgtttgtttaccgtaataaaaatcattttttttaaataaataatttagtttgtttggattcaacc 12545950  T
Q  155 gtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
     |||||||||||        ||||||| |||||||||| ||| || | ||||||||||||||||||    
T  12545949 atataaaagcgatttttttattacaaatttagttcaatattttaaattatattttctctctcctct 12545884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 5249236 - 5249341
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| ||||||| |||||| |||||| | |||  || ||||||||| |||||| |||||||||||||||||| |||||||||| |||| |||    
T  5249236 attaaaataaaattgatttttacataaaataatttaaagaa-atattttagagaatttatggaaaatcataatctattttacgtttgtttaccgtagtaa 5249334  T
Q  110 aaatcac 116  Q
    |||||||    
T  5249335 aaatcac 5249341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 28793888 - 28793993
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    ||||| |||||| |||||||||||| | |||||| ||||||||| ||||||| |||||||||||||||| ||||||||||| | ||||||| ||  ||||    
T  28793888 attaacataaaagtgattttgacatcaaataatttagagattatattttagaaattttatgaaaaatcaaaatctattttgtg-ttgtttaccgcgataa 28793986  T
Q  110 aaatcac 116  Q
    |||||||    
T  28793987 aaatcac 28793993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 35041362 - 35041256
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| | ||||||  |||| |||||| ||||||||  || |||||||||||||| |||||| |||||||||||| |||||||| ||| ||||    
T  35041362 attaaaataaaagtaattttgcaataaaataatttagagattaaattctagagattttatgagaaatcagaatctattttgcatttgtttaccgtgataa 35041263  T
Q  110 aaatcac 116  Q
    |||||||    
T  35041262 aaatcac 35041256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 6538206 - 6538136
Alignment:
Q  43 ttagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaat 113  Q
    ||||||||||| ||||| |||||||| ||||||||| ||||||||||| ||||||||| ||| ||||||||    
T  6538206 ttagagattatattttaaagattttaagaaaaatcagaatctattttgtgtttgtttaccgtgataaaaat 6538136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 17367698 - 17367600
Alignment:
Q  15 aaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaa 112  Q
    |||||||| | ||||| | |||| |||||| || |||||| ||||||||||||| |||||||||| ||||||||||| ||||||||| ||||| |||||    
T  17367698 aaataaaagtaattttaatataaaataatttagtgattatattttagagattttgtgaaaaatcaaaatctattttgtgtttgtttaccgtaacaaaaa 17367600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 17342414 - 17342474
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    |||||||||||||||| |||||| ||| ||||||| ||||||||| |||||||||||||||    
T  17342414 tttagagattttatgacaaatcagaatttattttgtgtttgtttaccgtaataaaaatcac 17342474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 38494379 - 38494470
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagatttt-atgaaaaatcataatctattttgcgtttgttta 100  Q
    |||| ||||||| |||||||||||| | | |||| | ||||||||||||||||||||| || |||||||| ||||||||||| |||||||||    
T  38494379 attagaataaaagtgattttgacattaaaaaatttaaagattattttttagagatttttataaaaaatcaaaatctattttgtgtttgttta 38494470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 113
Target Start/End: Original strand, 19950619 - 19950725
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaa---tcataatctattttgcgtttgtttaacgtaa 106  Q
    |||||||||||||| ||||||||||   ||  || ||||||||||||||||| ||||||| |||||   | ||||||||||||| ||||||||| |||||    
T  19950619 attaaaataaaaatcattttgacattgaatggtttagagattattttttagacattttataaaaaaaaattataatctattttgtgtttgtttatcgtaa 19950718  T
Q  107 taaaaat 113  Q
     ||||||    
T  19950719 caaaaat 19950725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 1349160 - 1349230
Alignment:
Q  43 ttagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaat 113  Q
    |||||||||||||||||  ||||||  ||||||||| ||| ||| ||| ||||||||| ||||||||||||    
T  1349160 ttagagattattttttaaggatttttcgaaaaatcagaatttatcttgtgtttgtttaccgtaataaaaat 1349230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 19135067 - 19135113
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||||    
T  19135067 gttacaaaattagttcaatcttttaaaccatattttctctctcctct 19135113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 25458569 - 25458523
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    |||||||||||||||||||||||  || |||||||||||||||||||    
T  25458569 gttacaaaattagttcaatcttttgatccatattttctctctcctct 25458523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 994313 - 994264
Alignment:
Q  63 attttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaa 112  Q
    ||||||| |||||||| ||||||||||| ||||||||| |||||||||||    
T  994313 attttataaaaaatcagaatctattttgtgtttgtttatcgtaataaaaa 994264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 25458343 - 25458394
Alignment:
Q  11 attaaaataaaaatgattttgacataagataa-ttagagattattttttaga 61  Q
    |||||||||||||| |||||||||||| |||| ||||||||||| |||||||    
T  25458343 attaaaataaaaataattttgacataaaataatttagagattatattttaga 25458394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 113
Target Start/End: Complemental strand, 27124307 - 27124205
Alignment:
Q  11 attaaaataaaaatgattttgacataagataa-ttagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| ||||||| ||||   |||| |||||||||| |||||||| ||||| | |||  |||||||||| |||| ||||||||| |||| |||    
T  27124307 attaaaataaaagtgattttaacatttaataatttagagattaatttttagatattttgt-aaacctcataatctactttgtgtttgtttatcgtagtaa 27124209  T
Q  110 aaat 113  Q
    ||||    
T  27124208 aaat 27124205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 35781836 - 35781895
Alignment:
Q  55 ttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatc 114  Q
    |||||||||||||||||||||| | || | |||||||||||||| |  ||||||||||||    
T  35781836 ttttagagattttatgaaaaattagaaccaattttgcgtttgttcacagtaataaaaatc 35781895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 19134809 - 19134855
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||||||| ||   ||||||||||||||||||    
T  19134809 gttacaaaattagttcaatcttttaaacaatattttctctctcctct 19134855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 26790122 - 26790198
Alignment:
Q  43 ttagagattattttttagagattttatgaaaaatc---ataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    |||||||||||||| |||||||||||||||||| |   |||||| | |||  ||||||||| |||||||| ||||||    
T  26790122 ttagagattattttctagagattttatgaaaaagcacaataatcaactttttgtttgtttatcgtaataacaatcac 26790198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 30054675 - 30054586
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgttta 100  Q
    |||||||||||| ||||||| | |||| |||||| |||||| |||||| ||||||| | | |||||||| ||||||||||  |||||||||    
T  30054675 attaaaataaaagtgattttaaaataaaataatttagagataattttt-agagattctttaaaaaatcagaatctattttatgtttgttta 30054586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 35041965 - 35041908
Alignment:
Q  11 attaaaataaaaatgattttgacataagataa-ttagagattattttttagagatttt 67  Q
    |||||||||||| |||||||||||||| |||| ||  |||||||||| ||||||||||    
T  35041965 attaaaataaaagtgattttgacataaaataatttttagattattttatagagatttt 35041908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 35781418 - 35781458
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctc 214  Q
    ||||||||||||||| ||||||| || ||||||||||||||    
T  35781418 gttacaaaattagtttaatcttttaaatcatattttctctc 35781458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 36852694 - 36852726
Alignment:
Q  43 ttagagattattttttagagattttatgaaaaa 75  Q
    |||||||||||||| ||||||||||||||||||    
T  36852694 ttagagattattttatagagattttatgaaaaa 36852726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 1e-49; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 43 - 220
Target Start/End: Original strand, 1826676 - 1826852
Alignment:
Q  43 ttagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcacnnnnnnnaaaagataatttaatttgt 142  Q
    ||||||||||||||||| | |||||||||||||||| ||| ||||||| |||||||||| ||||||||||||||       |||||||||||||||||||    
T  1826676 ttagagattattttttaaaaattttatgaaaaatcagaatttattttgtgtttgtttaaggtaataaaaatcactttttttaaaagataatttaatttgt 1826775  T
Q  143 ttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    |||||||||||| |||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||    
T  1826776 ttggatccagctatataaaagcgatttttta-ttacaaaattagttcaatctttaaattcatattttctctctcctct 1826852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 14787086 - 14787191
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||    
T  14787086 attaaaataaaagtgattttgacataaaataatttagagattatattttagagattttgtgaaaaatcagaatctattttgcgtttgtttaccgtaataa 14787185  T
Q  110 aaatca 115  Q
    ||||||    
T  14787186 aaatca 14787191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 24545838 - 24545734
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| | ||||||    
T  24545838 attaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgcgtttgtttaccataataa 24545739  T
Q  110 aaatc 114  Q
    |||||    
T  24545738 aaatc 24545734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 31667398 - 31667555
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||| ||||||| |||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||    
T  31667398 attaaaataaaagtgatttcgacataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgcgtttgtttaccgtgataa 31667497  T
Q  110 aaatcacnnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcga 166  Q
    |||||||       ||| | |||||||| ||||||| ||| ||||| |||||||||||    
T  31667498 aaatcactttttttaaacaaataatttagtttgttttgattcagctatataaaagcga 31667555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 220
Target Start/End: Original strand, 42676353 - 42676561
Alignment:
Q  13 taaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaa 111  Q
    |||||||||| |||||||||||||| | |||| ||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  42676353 taaaataaaagtgattttgacataaaagaatttagagattatatttttgagattttatgaaaaatcagaatctattttgcgtttgtttatcgtaataaaa 42676452  T
Q  112 atcacnnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattttc 210  Q
    |||||       ||| | | ||| || |||||||| || || || |||||||| ||       ||||||||||||||||||||||| || ||||||||||    
T  42676453 atcactttttttaaacaaaaaatctagtttgtttgcatacaactatataaaaggga-ttttttgttacaaaattagttcaatcttttaaatcatattttc 42676551  T
Q  211 tctctcctct 220  Q
    ||| ||||||    
T  42676552 tctatcctct 42676561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 15458831 - 15458935
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||| | |||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||  ||||| |    
T  15458831 attaaaataaaagtgattttgacattaaataatttagagattattttttagagattttatgaaaaatcagaatctattttgagtttgtttactgtaatga 15458930  T
Q  110 aaatc 114  Q
    |||||    
T  15458931 aaatc 15458935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 40662910 - 40662747
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcacnnnnnnnaaaagataatttaatttgtttggatccagctg 155  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||  ||||||||||||||       || | |||||||| ||||||||||| || ||     
T  40662910 tttagagattttatgaaaaatcagaatctattttgtgtttgtttacagtaataaaaatcacttttttaaataaataatttagtttgtttggatacaacta 40662811  T
Q  156 tataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    |||||||| ||       ||||||||||||||||||| ||| || ||||||||||||||||||||    
T  40662810 tataaaaggga-ttttttgttacaaaattagttcaattttttaaatcatattttctctctcctct 40662747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 36950537 - 36950433
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| ||||| |||||||||||||||| | ||| |||||||||||| |||| ||||||||    
T  36950537 attaaaataaaagtgattttgacataaaataatttagagattatattttaaagattttatgaaaaattagaatttattttgcgtttttttaccgtaataa 36950438  T
Q  110 aaatc 114  Q
    |||||    
T  36950437 aaatc 36950433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 37201541 - 37201643
Alignment:
Q  15 aaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaat 113  Q
    |||||||| |||||||||||||| |||||| |||||||||||||| |||||||| |||||||||| ||||||||||| ||||||||| | |||||| |||    
T  37201541 aaataaaagtgattttgacataaaataatttagagattattttttggagattttgtgaaaaatcacaatctattttgtgtttgtttaccttaataagaat 37201640  T
Q  114 cac 116  Q
    |||    
T  37201641 cac 37201643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 38722737 - 38722816
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctatttt 89  Q
    |||||||||||||||||||||| |||| |||||| ||||||||| |||||||||||||||||||||||| ||||||||||    
T  38722737 attaaaataaaaatgattttgatataaaataatttagagattatattttagagattttatgaaaaatcaaaatctatttt 38722816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 21479292 - 21479398
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| ||||| |||||||| |||||| ||||||||| |||||||||||||| |||||||   ||||||||||||||||||||| |||  |||    
T  21479292 attaaaataaaattgattctgacataaaataatttagagattatattttagagattttaagaaaaatgggaatctattttgcgtttgtttaccgtggtaa 21479391  T
Q  110 aaatcac 116  Q
    |||||||    
T  21479392 aaatcac 21479398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 34454091 - 34454001
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgttta 100  Q
    |||||||||||| ||||||| |||||| |||||| ||||||||| ||||||||||||||||||| |||| |||||||||||| ||||||||    
T  34454091 attaaaataaaagtgattttaacataaaataatttagagattatattttagagattttatgaaagatcagaatctattttgcatttgttta 34454001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 9420143 - 9420249
Alignment:
Q  11 attaaaataaaaatgattttgacataagataattaga-gattat-tttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaata 108  Q
    |||||||||||| |||||||||||| | |||||| || |||||| ||||||||||||||||||||||||| |||||||||| ||||| |||| || ||||    
T  9420143 attaaaataaaagtgattttgacattaaataatttgaagattatatttttagagattttatgaaaaatcagaatctatttttcgttt-tttaccgcaata 9420241  T
Q  109 aaaatcac 116  Q
    ||||||||    
T  9420242 aaaatcac 9420249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 218
Target Start/End: Original strand, 3256024 - 3256198
Alignment:
Q  47 agattattttttagagattttatg-aaaaatcataatctattttgcgtttgtttaacgtaataaaaatcacnnnnnnnaaa-agataatttaatttgttt 144  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||  ||||||||| |||||||||||||||       ||| | |||||||| |||||||    
T  3256024 agattattttttagagattttatgaaaaaatcagaatctcttttttgtttgtttaccgtaataaaaatcactttttttaaacaaataatttagtttgttt 3256123  T
Q  145 ggatccagctgtataaaagcga-nnnnnnngttacaaaattagttcaatctttaaattcatattttctctctcct 218  Q
    | || || || |||||||| ||        |||| |||||| ||||||||||| || ||||||||||||||||||    
T  3256124 gtatacaactatataaaagagattttttttgttaaaaaattggttcaatcttttaaatcatattttctctctcct 3256198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 7075052 - 7074992
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||| |||||||||||||||    
T  7075052 tttagagattttatgaaaaattataatttattttgagtttgtttaccgtaataaaaatcac 7074992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 41347463 - 41347403
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    |||||||||| |||||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  41347463 tttagagattatatgaaaaatcagaatctattttgcgtttgtttaccgtgataaaaatcac 41347403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 11667089 - 11667168
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctatttt 89  Q
    |||||||||||| |||||||| ||||| |||||| ||| |||||||| ||| ||||||||||||||||| ||||||||||    
T  11667089 attaaaataaaagtgattttgtcataaaataatttagatattattttgtagtgattttatgaaaaatcagaatctatttt 11667168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 113
Target Start/End: Original strand, 43004798 - 43004901
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| ||||||| ||||||| ||| | ||||   ||||||||||||||||| | |||||     
T  43004798 attaaaataaaagtgattttgacataaaataatttagagattatattttagatattttataaaacaacatagattattttgcgtttgtttatcataatac 43004897  T
Q  110 aaat 113  Q
    ||||    
T  43004898 aaat 43004901  T

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Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 13222468 - 13222371
Alignment:
Q  15 aaataaaaatgattttgacataagataattagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaat 113  Q
    ||||||||||||||||||||| |  |||| |||||||||||| || ||||||||| |||||| | |||||||||| | | |||||| ||||||||||||    
T  13222468 aaataaaaatgattttgacatcaactaat-agagattattttgtaaagattttataaaaaattagaatctattttccatctgtttagcgtaataaaaat 13222371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 18297096 - 18297007
Alignment:
Q  11 attaaaataaaaatgattttgaca-taagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgttt 99  Q
    |||||||||||||||||||| ||| ||| |||||| ||||||||| || |||||||||||||||||||||||| ||| |||| ||||||||    
T  18297096 attaaaataaaaatgatttt-acagtaaaataatttagagattatcttatagagattttatgaaaaatcataacctactttgagtttgttt 18297007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 44822104 - 44822170
Alignment:
Q  49 attattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatca 115  Q
    ||||||||||| | ||||||| |||||||| ||||||||||| ||||||||||||| ||||||||||    
T  44822104 attattttttaaaaattttattaaaaatcagaatctattttgtgtttgtttaacgtgataaaaatca 44822170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 30620491 - 30620571
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttg 90  Q
    |||||||||||  ||||||| |||||| |||||| ||||||||| ||||||||||||| |||||||||| |||||| ||||    
T  30620491 attaaaataaatgtgattttcacataaaataatttagagattatattttagagattttgtgaaaaatcagaatctagtttg 30620571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 30623112 - 30623192
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttg 90  Q
    |||||||||||  ||||||| |||||| |||||| ||||||||| ||||||||||||| |||||||||| |||||| ||||    
T  30623112 attaaaataaatgtgattttcacataaaataatttagagattatattttagagattttgtgaaaaatcagaatctagtttg 30623192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 21479139 - 21479197
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatc 114  Q
    ||||||||||||||||||||| | ||||||||||| ||||||||| ||| |||||||||    
T  21479139 tttagagattttatgaaaaattagaatctattttgtgtttgtttaccgtgataaaaatc 21479197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 30668894 - 30668940
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||    
T  30668894 gttacaaaattagttcaatcttttaaatcatattttctctctcctct 30668940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 9977805 - 9977899
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattatttt----ttagagattttatgaaaaatcataatctattttgcgtttgttta 100  Q
    |||||||||||| |||||||||| | | |||||| ||||||||||||    ||||||||||||  |||||||| ||||||||||||||| |||||    
T  9977805 attaaaataaaagtgattttgacgttaaataatttagagattattttttttttagagattttacaaaaaatcaaaatctattttgcgttagttta 9977899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 43968720 - 43968661
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatca 115  Q
    |||||||||||| | |||||||| ||||||||||||||||||||| ||  ||||||||||    
T  43968720 tttagagattttgtaaaaaatcagaatctattttgcgtttgtttaccgcgataaaaatca 43968661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 30620603 - 30620649
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||||||| |  ||||||||||||||||||||    
T  30620603 gttacaaaattagttcaatcttttatatcatattttctctctcctct 30620649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 30623224 - 30623270
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||||||| |  ||||||||||||||||||||    
T  30623224 gttacaaaattagttcaatcttttatatcatattttctctctcctct 30623270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 43004948 - 43004994
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||||||| || ||||||||||||| ||||||    
T  43004948 gttacaaaattagttcaatcttttaaatcatattttctctttcctct 43004994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 1951680 - 1951737
Alignment:
Q  43 ttagagattattttttagagattttatgaaaaatcataatctattttgcgtttgttta 100  Q
    |||||||||||||||||| |||| ||| |||||||||||| ||||||| | |||||||    
T  1951680 ttagagattattttttagtgattgtataaaaaatcataatatattttgtgattgttta 1951737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 7495517 - 7495577
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    |||||| ||||||| |||||||| |||||||||  |||||||| | |||||||||||||||    
T  7495517 tttagatattttataaaaaatcagaatctatttaacgtttgttaaccgtaataaaaatcac 7495577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 43968602 - 43968562
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctc 214  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  43968602 gttacaaaattagttcaatcttttaaatcatattttctctc 43968562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 162
Target Start/End: Original strand, 559431 - 559553
Alignment:
Q  43 ttagagattattttttagagattttatgaaaaatcataatctattttgcg---tttgtttaacgtaataaaaatcacnnnnnnnaaaagataatttaatt 139  Q
    ||||||||||||||||||||| |||||||||||  |||||| |||||  |   ||| |||| |||||||| ||||||       |||| ||||||||||     
T  559431 ttagagattattttttagagactttatgaaaaagaataatcaattttatgttttttttttatcgtaataacaatcacatctttgaaaaaataatttaata 559530  T
Q  140 tgtttggatccagctgtataaaa 162  Q
    ||||||||| || || |||||||    
T  559531 tgtttggatacaactatataaaa 559553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 30632174 - 30632221
Alignment:
Q  43 ttagagattattttttagagattttatgaaaaatcataatctattttg 90  Q
    ||||||||||| ||||||||||||| |||||||||| |||||| ||||    
T  30632174 ttagagattatattttagagattttgtgaaaaatcagaatctagtttg 30632221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 43968384 - 43968330
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagatt 65  Q
    |||||||||||| | |||||||||||| |||||| |||||||||||||||||||||    
T  43968384 attaaaataaaagt-attttgacataaaataatttagagattattttttagagatt 43968330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 30666311 - 30666353
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctc 216  Q
    ||||||||||| ||||||||||| || ||||||||||||||||    
T  30666311 gttacaaaatttgttcaatcttttaaatcatattttctctctc 30666353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 42679591 - 42679525
Alignment:
Q  46 gagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaa 112  Q
    |||||||| ||||||||||||| |||||||| | ||| ||||||  ||||||||| ||||| |||||    
T  42679591 gagattatattttagagattttgtgaaaaattaaaatttattttatgtttgtttaccgtaacaaaaa 42679525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 8e-48; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 27882656 - 27882446
Alignment:
Q  11 attaaaataaaaatgattttgacataagataat-tagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| ||||| ||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||| |||| |||    
T  27882656 attaaaataaaagtgattttgacataaaataatatagagattattttttggagatattatgaaaaatcaaaatctattttgcgtttgtttagcgtagtaa 27882557  T
Q  110 aaatcacnnnnnnnaaaagataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatatttt 209  Q
    ||||||        |||| |||||||| ||||||||||  ||||| |||||||||||       |||||||||||||||||||||||| || || |||||    
T  27882556 aaatcatttttttaaaaaaataatttagtttgtttggaaacagctatataaaagcgattttattgttacaaaattagttcaatctttagatccacatttt 27882457  T
Q  210 ctctctcctct 220  Q
    |||||||||||    
T  27882456 ctctctcctct 27882446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 28022836 - 28022626
Alignment:
Q  11 attaaaataaaaatgattttgacataagataat-tagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| ||||| ||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||| |||| |||    
T  28022836 attaaaataaaagtgattttgacataaaataatatagagattattttttggagatattatgaaaaatcaaaatctattttgcgtttgtttagcgtagtaa 28022737  T
Q  110 aaatcacnnnnnnnaaaagataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatatttt 209  Q
    ||||||        |||| |||||||| ||||||||||  ||||| |||||||||||       |||||||||||||||||||||||| || || |||||    
T  28022736 aaatcatttttttaaaaaaataatttagtttgtttggaaacagctatataaaagcgattttattgttacaaaattagttcaatctttagatccacatttt 28022637  T
Q  210 ctctctcctct 220  Q
    |||||||||||    
T  28022636 ctctctcctct 28022626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 35308345 - 35308133
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  35308345 attaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcataatctattttgcgtttgtttaccgtgataa 35308246  T
Q  110 aaatcacnnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcga-nnnnnnngttacaaaattagttcaatctttaaattcatatt 207  Q
    |||||||       ||| | |||||||| ||||||||||| || || |||||||| ||        ||||||||||||||||||||||| || |||||||    
T  35308245 aaatcactttttttaaacaaataatttagtttgtttggatacaactatataaaagggattttttttgttacaaaattagttcaatcttttaaatcatatt 35308146  T
Q  208 ttctctctcctct 220  Q
    |||||||||||||    
T  35308145 ttctctctcctct 35308133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 6007557 - 6007767
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| ||||||||||||| |||||||||| ||| ||||||||||||||||| ||||||||    
T  6007557 attaaaataaaagtgattttgacataaaataatttagagattatattttagagattttgtgaaaaatcagaatgtattttgcgtttgtttaccgtaataa 6007656  T
Q  110 aaatcacnnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattt 208  Q
    |||||||       ||| | ||||| || |||||||| || || || |||||||| ||       ||| ||||||||||||||||||| || ||||||||    
T  6007657 aaatcactttttttaaacaaataatctagtttgtttgaatacaactatataaaaggga-ttttttgttgcaaaattagttcaatcttttaaatcatattt 6007755  T
Q  209 tctctctcctct 220  Q
    ||||||||||||    
T  6007756 tctctctcctct 6007767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 5764766 - 5764872
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| || |||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  5764766 attaaaataaaagtgattttgacataaaataatttagcgattatattttagagattttatgaaaaatcagaatctattttgcgtttgtttaccgtaataa 5764865  T
Q  110 aaatcac 116  Q
    |||||||    
T  5764866 aaatcac 5764872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 1153871 - 1153766
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| ||||||||| |||| |||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  1153871 attaaaataaaagtgattttgatataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgcgtttgtttaccgtaataa 1153772  T
Q  110 aaatca 115  Q
    ||||||    
T  1153771 aaatca 1153766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 216
Target Start/End: Original strand, 15199615 - 15199821
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| || |||||||  |||||||||  |||||||    
T  15199615 attaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcagaaactattttatgtttgtttactgtaataa 15199714  T
Q  110 aaatcacnnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattt 208  Q
    |||||||       ||| | |||||||| |||||||| || || || |||||||| ||        |||||||||||||||||||||| || | ||||||    
T  15199715 aaatcactttttttaaacaaataatttagtttgtttgaatacaactatataaaag-gagttttttattacaaaattagttcaatcttttaaataatattt 15199813  T
Q  209 tctctctc 216  Q
    ||||||||    
T  15199814 tctctctc 15199821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 339738 - 339842
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| ||||||||||||   |||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| | ||||||    
T  339738 attaaaataaaagtgattttgacatcgaataatttagagattattttttagagattttacgaaaaatcaaaatctattttgcgtttgtttaccctaataa 339837  T
Q  110 aaatc 114  Q
    |||||    
T  339838 aaatc 339842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 43 - 218
Target Start/End: Complemental strand, 28828206 - 28828029
Alignment:
Q  43 ttagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcacnnnnnnnaaa-agataatttaatttg 141  Q
    |||||||||||  |||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||       ||| | |||||||||||||    
T  28828206 ttagagattatagtttagagattttataaaaaatcagaatctattttgcgtttgtttaccgtaataaaaatcactttttttaaacaaataatttaatttg 28828107  T
Q  142 tttggatccagctgtataaaagcga-nnnnnnngttacaaaattagttcaatctttaaattcatattttctctctcct 218  Q
    ||||||| || || |||||||| ||        |||||||| |||||||||||||| || |||||||||| |||||||    
T  28828106 tttggatacaactatataaaagggatttttttcgttacaaagttagttcaatcttttaaatcatattttcactctcct 28828029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 17073187 - 17072976
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| | ||| ||||||| |||||||||| ||||||||||  ||||||||| | | ||||    
T  17073187 attaaaataaaagtgattttgacataaaataatttagagattatatattatagattttgtgaaaaatcagaatctattttatgtttgtttagcatgataa 17073088  T
Q  110 aaatcacnnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattt 208  Q
    |||| ||       ||| | ||||| |||||||||||||| || || |||||||| ||        |||||||||||||||||||||| || ||||||||    
T  17073087 aaattactttttttaaacatataatataatttgtttggatacaactatataaaagagatttttttattacaaaattagttcaatcttttaaatcatattt 17072988  T
Q  209 tctctctcctct 220  Q
    ||||| ||||||    
T  17072987 tctctgtcctct 17072976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 17575083 - 17575294
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| | ||| ||||||| |||||||||| ||||||||||  ||||||||| | | ||||    
T  17575083 attaaaataaaagtgattttgacataaaataatttagagattatatattatagattttgtgaaaaatcagaatctattttatgtttgtttagcatgataa 17575182  T
Q  110 aaatcacnnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattt 208  Q
    |||| ||       ||| | ||||| |||||||||||||| || || |||||||| ||        |||||||||||||||||||||| || ||||||||    
T  17575183 aaattactttttttaaacatataatataatttgtttggatacaactatataaaagagatttttttattacaaaattagttcaatcttttaaatcatattt 17575282  T
Q  209 tctctctcctct 220  Q
    ||||| ||||||    
T  17575283 tctctgtcctct 17575294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 24981386 - 24981497
Alignment:
Q  5 ttacctattaaaataaaaatgattttgacataagataat-tagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacg 103  Q
    |||| ||||||||||||| |||||||| ||||| ||||| |||||||||| |||||||||||||||||||||||  ||||||||||  |||| |||| ||    
T  24981386 ttacgtattaaaataaaattgattttgtcataaaataatatagagattatattttagagattttatgaaaaatcgaaatctattttatgtttttttaccg 24981485  T
Q  104 taataaaaatca 115  Q
    ||||||||||||    
T  24981486 taataaaaatca 24981497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 55 - 220
Target Start/End: Original strand, 5424701 - 5424867
Alignment:
Q  55 ttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcacnnnnnnnaaa-agataatttaatttgtttggatccagc 153  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||  ||||||||||| ||       ||| | |||||||| ||||||||||| || |    
T  5424701 ttttagagattttatgaaaaatcagaatctattttgcctttgtttagtgtaataaaaataactttttttaaacaaataatttagtttgtttggatacaac 5424800  T
Q  154 tgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    | |||||||| ||       ||||||||||||||||||||||| ||  ||||||||| |||||||||    
T  5424801 tatataaaagggatttttttgttacaaaattagttcaatcttttaaagcatattttcactctcctct 5424867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 29 - 214
Target Start/End: Original strand, 13916436 - 13916622
Alignment:
Q  29 ttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcacnnnnnnnaaa- 126  Q
    ||||||||| |||||| |||| |||| |||||||||||||||||||| ||| ||||||||||||||||||||| | |||||||||||||       |||     
T  13916436 ttgacataaaataatttagagtttatattttagagattttatgaaaagtcaaaatctattttgcgtttgtttaccataataaaaatcacgttttttaaac 13916535  T
Q  127 agataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattttctctc 214  Q
    | |||||||| ||||||||||| || || |||||||| ||       ||||||||||||||||||||||| ||  |||||||| ||||    
T  13916536 aaataatttagtttgtttggatacaactatataaaaggga-ttttttgttacaaaattagttcaatcttttaaaacatattttttctc 13916622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 220
Target Start/End: Original strand, 1030299 - 1030476
Alignment:
Q  43 ttagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatc-acnnnnnnnaaaagataatttaatttg 141  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||| |||| |||||||| |        |||| || ||||  ||||    
T  1030299 ttagagattatattttagagattttatgaaaaatcaaaatctattttgcatttgtttaccgtagtaaaaatcaattttttaaaaaaaattatttggtttg 1030398  T
Q  142 tttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||| || || |||||||| ||       ||||||||||||||||||||||| || || |||||||||||||||||    
T  1030399 tttggatacaactatataaaagtga-ttttttgttacaaaattagttcaatcttttaactcttattttctctctcctct 1030476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 113
Target Start/End: Complemental strand, 11464696 - 11464593
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||||||||||||||  || |||||| ||||||||| ||||| |||||||||||| ||||  ||| |||||||||||||||||  |||||||    
T  11464696 attaaaataaaaatgattttgacgaaaaataatttagagattatattttaaagattttatgaataatctaaatttattttgcgtttgtttagggtaataa 11464597  T
Q  110 aaat 113  Q
    ||||    
T  11464596 aaat 11464593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 4443860 - 4443951
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagatttt-atgaaaaatcataatctattttgcgtttgttta 100  Q
    |||||||||||| |||||||||||||| |||||| | ||||||| ||||| ||||||| ||||||||||| ||||||||||| |||||||||    
T  4443860 attaaaataaaagtgattttgacataaaataatttatagattatattttaaagatttttatgaaaaatcaaaatctattttgggtttgttta 4443951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 18947085 - 18947003
Alignment:
Q  19 aaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgttta 100  Q
    |||||||||||||||||   |||||| |||| |||||||||||||||||||||||||| ||||||| |||||| |||||||||    
T  18947085 aaaaatgattttgacattcaataatttagaggttattttttagagattttatgaaaaagcataatcgattttgtgtttgttta 18947003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 6007959 - 6008020
Alignment:
Q  55 ttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    ||||||||||||| |||||||||| ||||||||||||||||| ||| |||||||||||||||    
T  6007959 ttttagagattttgtgaaaaatcagaatctattttgcgtttgcttatcgtaataaaaatcac 6008020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 32795264 - 32795371
Alignment:
Q  5 ttacctattaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacg 103  Q
    |||| ||||||| ||||||| |||||||||||| |||||| ||| ||||||||| | ||||||||| |||||| | ||||||||||| ||||||||| ||    
T  32795264 ttacatattaaattaaaaataattttgacataaaataatttagatattattttt-atagattttattaaaaattaaaatctattttgtgtttgtttaccg 32795362  T
Q  104 taataaaaa 112  Q
    || ||||||    
T  32795363 tagtaaaaa 32795371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 43 - 115
Target Start/End: Original strand, 40737344 - 40737416
Alignment:
Q  43 ttagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatca 115  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||| ||| |||| | | ||||||||||    
T  40737344 ttagagattatattttagagattttatgaaaaatcagaatctattttgcatttttttaccttgataaaaatca 40737416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 27964698 - 27964899
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt---agagattattttttagagattttatgaaaaatcataatcta-ttttgcgtttgtttaacgtaa 106  Q
    |||||||||||| ||||||||||| || ||||||   ||||||| | |||||||||||||||||| ||||| |||||| |||| ||||| |||| |||||    
T  27964698 attaaaataaaagtgattttgacagaaaataatttagagagattgtattttagagattttatgaataatcagaatctattttttcgttt-tttatcgtaa 27964796  T
Q  107 taaaaatcacnnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcata 205  Q
    | ||||||||       ||| | |||||| | ||||||||||| || || |||||||| ||       ||||||||| ||||||||||||| ||||||||    
T  27964797 tcaaaatcacttttttaaaacaaataattgagtttgtttggatacaactatataaaaggga-ttttttgttacaaaactagttcaatcttttaattcata 27964895  T
Q  206 tttt 209  Q
    ||||    
T  27964896 tttt 27964899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 5765533 - 5765472
Alignment:
Q  55 ttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    ||||||||||||| |||||||||| ||||||||||| |||||||||  ||||||||||||||    
T  5765533 ttttagagattttgtgaaaaatcaaaatctattttgtgtttgtttactgtaataaaaatcac 5765472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 342854 - 342782
Alignment:
Q  43 ttagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatca 115  Q
    ||||||||||| |||||||||||||||  | | ||| |||||||||||| |||||||| ||||||||||||||    
T  342854 ttagagattatattttagagattttattcatattcagaatctattttgcatttgtttaccgtaataaaaatca 342782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 27965874 - 27965810
Alignment:
Q  11 attaaaataaaaatgattttgacataagataat-tagagattattttttagagattttatgaaaa 74  Q
    |||||||||||| |||||||||||||| ||||| ||||||||||||||| ||||| |||||||||    
T  27965874 attaaaataaaagtgattttgacataaaataatatagagattattttttggagatattatgaaaa 27965810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 5424647 - 5424588
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatca 115  Q
    ||||||||||||| |||||| || ||||||||||||||||||||| | ||||||||||||    
T  5424647 tttagagattttaggaaaaagcagaatctattttgcgtttgtttaccttaataaaaatca 5424588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 18969454 - 18969550
Alignment:
Q  19 aaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    |||||||||||||||||   |||||| ||||||||||||||||||||||||||||| | ||||||| |  ||| |||||||||  ||||||| ||||||    
T  18969454 aaaaatgattttgacattcaataatttagagattattttttagagattttatgaaatagcataatcga--ttgtgtttgtttattgtaataacaatcac 18969550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 1153738 - 1153692
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||    
T  1153738 gttacaaaattagttcaatcttttaaatcatattttctctctcctct 1153692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 27965174 - 27965083
Alignment:
Q  129 ataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    |||||||| ||||||||||  ||||| |||||||||||       |||||||||||||||||||| ||| || |||||||||| ||||||||    
T  27965174 ataatttagtttgtttggaaacagctatataaaagcgattttattgttacaaaattagttcaatcgttagatccatattttctatctcctct 27965083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 27965249 - 27965200
Alignment:
Q  66 ttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatca 115  Q
    ||||||||||||| ||||||||||||||||||||| |||| |||||||||    
T  27965249 ttatgaaaaatcaaaatctattttgcgtttgtttagcgtagtaaaaatca 27965200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 40796342 - 40796298
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgttta 100  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||    
T  40796342 tttagagattttatgaaaaatcagaatctatttagcgtttgttta 40796298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 18969854 - 18969952
Alignment:
Q  19 aaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    |||||||||||||||||   |||||| |||| | ||| |||||||||||||| ||||| ||||||| |||| | |||||||||  ||||||| ||||||    
T  18969854 aaaaatgattttgacattcaataatttagaggtaattgtttagagattttattaaaaagcataatcgatttggtgtttgtttattgtaataacaatcac 18969952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 17073204 - 17073273
Alignment:
Q  43 ttagagattattttttagagatttt-atgaaaaatcataatctattttgcgtttgtttaacgtaataaaa 111  Q
    ||||||||||| ||||||| ||||| || |||||||| |||||||||||||||| |||| ||| ||||||    
T  17073204 ttagagattatattttagaaatttttattaaaaatcagaatctattttgcgtttttttaccgttataaaa 17073273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 17575066 - 17574997
Alignment:
Q  43 ttagagattattttttagagatttt-atgaaaaatcataatctattttgcgtttgtttaacgtaataaaa 111  Q
    ||||||||||| ||||||| ||||| || |||||||| |||||||||||||||| |||| ||| ||||||    
T  17575066 ttagagattatattttagaaatttttattaaaaatcagaatctattttgcgtttttttaccgttataaaa 17574997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 40796221 - 40796176
Alignment:
Q  175 ttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||    
T  40796221 ttacaaaattagttcaatcttttaaaccatattttctctctcctct 40796176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 209
Target Start/End: Original strand, 28022294 - 28022444
Alignment:
Q  59 agagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcacnnnnnnnaaa-agataatttaatttgtttggatccagctgta 157  Q
    ||||||||||||||||| || ||||||||||    ||||||| |||||||||||||||       ||| | |||||||| ||||||||||| || || ||    
T  28022294 agagattttatgaaaaaccagaatctattttttcgttgtttaccgtaataaaaatcactttttaaaaacaaataatttagtttgtttggatacaactata 28022393  T
Q  158 taaaagcgannnnnnngttacaaaattagttcaatctttaaattcatatttt 209  Q
    |||||| ||       ||||||||| || |||||||||| ||||||||||||    
T  28022394 taaaagaga-ttttttgttacaaaactaattcaatcttttaattcatatttt 28022444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 17073336 - 17073382
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||||||| ||   ||||||||||||||||||    
T  17073336 gttacaaaattagttcaatcttttaaacaatattttctctctcctct 17073382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 17574934 - 17574888
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||||||| ||   ||||||||||||||||||    
T  17574934 gttacaaaattagttcaatcttttaaacaatattttctctctcctct 17574888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 209
Target Start/End: Original strand, 27882113 - 27882264
Alignment:
Q  59 agagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcacnnnnnnnaa--aagataatttaatttgtttggatccagctgt 156  Q
    ||||||||||||||||| || ||||||||||    ||||||| |||||||||||||||       ||  || |||||||| ||||||||||| || || |    
T  27882113 agagattttatgaaaaaccagaatctattttttcgttgtttaccgtaataaaaatcactttttaaaaacaaaataatttagtttgtttggatacaactat 27882212  T
Q  157 ataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatatttt 209  Q
    ||||||| ||       ||||||||| || |||||||||| ||||||||||||    
T  27882213 ataaaagaga-ttttttgttacaaaactaattcaatcttttaattcatatttt 27882264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 27964004 - 27964050
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    |||||||||||||||||| |||| || | ||||||||||||||||||    
T  27964004 gttacaaaattagttcaaccttttaaattatattttctctctcctct 27964050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 5765202 - 5765157
Alignment:
Q  68 atgaaaaatcataatctattttgcgtttgtttaacgtaataaaaat 113  Q
    ||||||||||| |||| |||||||||||| ||| ||||||||||||    
T  5765202 atgaaaaatcagaatccattttgcgtttgcttaccgtaataaaaat 5765157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 28152350 - 28152434
Alignment:
Q  12 ttaaaataaaaatgattttgacataagataatt--agagattattttttagagattttatgaaaaatcataatctattttgcgtt 94  Q
    ||||||||||| |||||||||||| | ||||||  | |||||   |||| ||||||| || |||||||| |||||||||||||||    
T  28152350 ttaaaataaaagtgattttgacatcaaataattttatagattcaatttttgagatttgataaaaaatcagaatctattttgcgtt 28152434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 27881244 - 27881304
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    |||||||||| ||| |||||||| | | |||||||||||||||||  | ||||||||||||    
T  27881244 tttagagattatataaaaaatcacattatattttgcgtttgtttactgcaataaaaatcac 27881304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 28021425 - 28021485
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    |||||||||| ||| |||||||| | | |||||||||||||||||  | ||||||||||||    
T  28021425 tttagagattatataaaaaatcacattatattttgcgtttgtttactgcaataaaaatcac 28021485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 33489502 - 33489443
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    ||||||||||| ||||||  | ||||||||||||| |||||||||  ||||||||||||||    
T  33489502 tttagagatttcatgaaag-taataatctattttgtgtttgtttattgtaataaaaatcac 33489443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 45183003 - 45183043
Alignment:
Q  175 ttacaaaattagttcaatctttaaattcatattttctctct 215  Q
    ||||||||||||||||||||||  || ||||||||||||||    
T  45183003 ttacaaaattagttcaatcttttgatccatattttctctct 45183043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 8e-45; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 43115165 - 43114956
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| | |||||||||||| |||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||     
T  43115165 attaaaataaaagtaattttgacataaaataatttaaagattattttttagagattttatgaaaaatcagaatctattttgcgtttgtttaccgtaatag 43115066  T
Q  110 aaatcacnnnnnnnaaaagataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatatttt 209  Q
    |||||||        ||| |||||||| ||||||||||| ||||| ||||||| |||       ||||||||||||||| |||||||||||  |||||||    
T  43115065 aaatcacttttttttaaaaataatttagtttgtttggatacagctatataaaatcga-ttttttgttacaaaattagtttaatctttaaatctatatttt 43114967  T
Q  210 ctctctcctct 220  Q
    |||||||||||    
T  43114966 ctctctcctct 43114956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 6844347 - 6844557
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||    
T  6844347 attaaaataaaagtgattttgacataaaataatttagagattatattttagagattttataaaaaatcagaatctattttgcgtttgtttaccgtaataa 6844446  T
Q  110 aaatcacnnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattt 208  Q
    |||||||       ||| | ||||| || ||||||||||| || || |||||||| ||       ||||||||||||||| ||||||| || | ||||||    
T  6844447 aaatcactttttttaaacaaataatctagtttgtttggatgcaactatataaaagaga-ttttttgttacaaaattagtttaatcttttaaataatattt 6844545  T
Q  209 tctctctcctct 220  Q
    ||||||||||||    
T  6844546 tctctctcctct 6844557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 33674864 - 33675074
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||    
T  33674864 attaaaataaaaatgattttgacataaaataatttagagattatattttagatattttatgaaaaatcagaatctattttgcgtttgtttaccgtaataa 33674963  T
Q  110 aaatcacnnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattt 208  Q
    |||| ||       ||| | ||||||||||||| |||||| || || |||||||| ||       |||||||||||| |||||||||| ||   ||||||    
T  33674964 aaataactttttttaaacaaataatttaatttgattggatacaactatataaaagaga-ttttttgttacaaaattaattcaatcttttaaacaatattt 33675062  T
Q  209 tctctctcctct 220  Q
    ||||||||||||    
T  33675063 tctctctcctct 33675074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 33240964 - 33241069
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  33240964 attaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgtgtttgtttatcgtaataa 33241063  T
Q  110 aaatca 115  Q
    ||||||    
T  33241064 aaatca 33241069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 214
Target Start/End: Original strand, 6318792 - 6318997
Alignment:
Q  13 taaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaa 111  Q
    ||||||| || |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| ||||||||||| |||||| || ||||||||||    
T  6318792 taaaatagaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgtgtttgtgtaccgtaataaaa 6318891  T
Q  112 atcacnnnnnnnaaa-agataa---tttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatatt 207  Q
    || ||       ||| ||||||   |||||||||||||||| || || |||||||| ||       ||||||||||||||||||||||| ||| ||||||    
T  6318892 attacttttttaaaacagataattttttaatttgtttggatgcaactatataaaaggga-ttttttgttacaaaattagttcaatcttttaatccatatt 6318990  T
Q  208 ttctctc 214  Q
    |||||||    
T  6318991 ttctctc 6318997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 17054106 - 17054217
Alignment:
Q  5 ttacctattaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacg 103  Q
    |||| ||||||||||||| |||||||||| ||| |||||| ||||||||| |||||||||||  ||||||||||| ||||||||||||||||||||| ||    
T  17054106 ttacatattaaaataaaagtgattttgac-taaaataatttagagattatattttagagattaaatgaaaaatcagaatctattttgcgtttgtttaccg 17054204  T
Q  104 taataaaaatcac 116  Q
    |||||||||||||    
T  17054205 taataaaaatcac 17054217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 24686074 - 24686287
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattt--tttagagatttta-tgaaaaatcataatctattttgcgtttgtttaacgtaa 106  Q
    |||||||||||| | |||||||||||  |||||| ||||||||| |  ||||||||||||  |||||||||| |||||||||| |||||||||| |||||    
T  24686074 attaaaataaaagtaattttgacatacaataatttagagattatatattttagagatttttgtgaaaaatcagaatctattttacgtttgtttaccgtaa 24686173  T
Q  107 taaaaatcacnnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcata 205  Q
    ||||||| ||       ||| | ||||| || ||||||||||| ||||| |||||||||||       ||||||||||||||||||||||| ||| ||||    
T  24686174 taaaaataactttttttaaacaaataatctagtttgtttggatacagctatataaaagcga-ttttttgttacaaaattagttcaatcttttaatccata 24686272  T
Q  206 ttttctctctcctct 220  Q
    |||||||||||||||    
T  24686273 ttttctctctcctct 24686287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 43326164 - 43325954
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| ||||||| |||||| |||||| ||||||||| |||||||||||||||||||||||| |||||||||| |||||||||| |   ||||    
T  43326164 attaaaataaaagtgattttcacataaaataatttagagattatattttagagattttatgaaaaatcagaatctatttttcgtttgtttaccacgataa 43326065  T
Q  110 aaatcac-nnnnnnnaaaagataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattt 208  Q
    |||||||        || | |||||||||||||||||||| ||  | |||||||| ||       ||||||||||||||| ||||||| ||  |||||||    
T  43326064 aaatcactttttttcaacaaataatttaatttgtttggatacaattatataaaaggga-ttttttgttacaaaattagtttaatcttttaaaacatattt 43325966  T
Q  209 tctctctcctct 220  Q
    ||||||||||||    
T  43325965 tctctctcctct 43325954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 113
Target Start/End: Original strand, 11981597 - 11981700
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| ||||||||| |||||||||||||| |||||||||| |||||||||| |||| |||    
T  11981597 attaaaataaaagtgattttgacataaaataatttagagattatattttagagactttatgaaaaatcagaatctattttccgtttgtttatcgtattaa 11981696  T
Q  110 aaat 113  Q
    ||||    
T  11981697 aaat 11981700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 10065992 - 10066094
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| ||| ||||| ||||||| |||||||||||||||| ||||||||||||||||||||| |||| |||    
T  10065992 attaaaataaaagtgattttgacataaaataatttagaaattatattttagaaattttatgaaaaatcagaatctattttgcgtttgtttaccgtagtaa 10066091  T
Q  110 aaa 112  Q
    |||    
T  10066092 aaa 10066094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 39842677 - 39842783
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    ||||||||||||||||||||||||||| |||||| ||||||| | ||||||||||||||| |||||| | ||||||||||| |||||||||  |||||||    
T  39842677 attaaaataaaaatgattttgacataaaataatttagagattctattttagagattttataaaaaataagaatctattttgtgtttgtttacagtaataa 39842776  T
Q  110 aaatcac 116  Q
    |||||||    
T  39842777 aaatcac 39842783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 47795646 - 47795536
Alignment:
Q  5 ttacctattaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacg 103  Q
    |||| ||||||||| ||| |||||| ||||||| |||||| ||||| ||| |||||||||||||||||||||||| ||||||||||| ||||||||| ||    
T  47795646 ttacatattaaaattaaagtgattt-gacataaaataatttagagaatatattttagagattttatgaaaaatcagaatctattttgtgtttgtttaccg 47795548  T
Q  104 taataaaaatca 115  Q
    ||||||||||||    
T  47795547 taataaaaatca 47795536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 220
Target Start/End: Original strand, 48738392 - 48738589
Alignment:
Q  24 tgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac-nnnnn 121  Q
    |||||| ||||||| |||||| ||| ||||| ||||| |||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||          
T  48738392 tgatttagacataaaataatttagaaattatattttaaagattttatgaaaaatcataatctattttgtgttcgtttaccgtaataaaaatcactctttt 48738491  T
Q  122 nnaaaagataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
      || | |||||||| ||||||| ||| || ||||||||||| ||       ||||||||||||||||||||||| ||   ||||||||||||||||||    
T  48738492 tgaacaaataatttagtttgtttagatacaactgtataaaagtga-ttttttgttacaaaattagttcaatcttttaaacaatattttctctctcctct 48738589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 42429477 - 42429583
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||||||| ||||| ||| |||||||| ||| |||||||||||||||||  ||| |||    
T  42429477 attaaaataaaagtgattttgacataaaataatttagagattattttttatagattatataaaaaatcagaatttattttgcgtttgtttattgtagtaa 42429576  T
Q  110 aaatcac 116  Q
    |||||||    
T  42429577 aaatcac 42429583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 46675902 - 46675797
Alignment:
Q  11 attaaaataaaaatgattttgacataagataat-tagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||| ||| |||||||||| ||| ||||| || |||||||||||||||||||||||||||||||| ||||||||||| |||| |||| | ||||||    
T  46675902 attaaaattaaagtgattttgacgtaaaataatatatagattattttttagagattttatgaaaaatcagaatctattttgtgtttatttaccttaataa 46675803  T
Q  110 aaatca 115  Q
    ||||||    
T  46675802 aaatca 46675797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 52404381 - 52404276
Alignment:
Q  12 ttaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaa 110  Q
    |||||||||||||||||||||||||| |||||| ||||||||| | ||||||||||| |||| ||||| |||||||||| |||||||||| | | |||||    
T  52404381 ttaaaataaaaatgattttgacataaaataatttagagattatatattagagattttgtgaagaatcagaatctattttacgtttgtttagcatgataaa 52404282  T
Q  111 aatcac 116  Q
    ||||||    
T  52404281 aatcac 52404276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 47795820 - 47795924
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| ||||||||| |||| |||||| | ||||||| ||||||||||| |||||||||||| ||||||||||| |||||||||  |||||||    
T  47795820 attaaaataaaagtgattttgatataaaataatttatagattatattttagagattatatgaaaaatcagaatctattttgtgtttgtttactgtaataa 47795919  T
Q  110 aaatc 114  Q
    |||||    
T  47795920 aaatc 47795924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 6614467 - 6614366
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| | ||||||| ||||||| |||||||||||||||| |||||||||| |  ||||||| ||||||||    
T  6614467 attaaaataaaagtgattttgacataaaataatttaaagattatattttagaaattttatgaaaaatcagaatctattttacaattgtttaccgtaataa 6614368  T
Q  110 aa 111  Q
    ||    
T  6614367 aa 6614366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 47794801 - 47794712
Alignment:
Q  11 attaaaataaaaatgattttgacataagataa-ttagagattattttttagagattttatgaaaaatcataatctattttgcgtttgttt 99  Q
    |||||||||||| |||||||||||||| |||| ||||||||||| ||||| |||||||||||||||||| ||| ||||||| ||||||||    
T  47794801 attaaaataaaagtgattttgacataaaataaattagagattatattttaaagattttatgaaaaatcagaatttattttgtgtttgttt 47794712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 33813468 - 33813378
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgttta 100  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| ||||||||||| | | |||||||| ||||||||||  |||||||||    
T  33813468 attaaaataaaagtgattttgacataaaataatttagagattatgttttagagattctttaaaaaatcagaatctattttatgtttgttta 33813378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 33872938 - 33872848
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgttta 100  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| ||||||||||| | | |||||||| ||||||||||  |||||||||    
T  33872938 attaaaataaaagtgattttgacataaaataatttagagattatgttttagagattctttaaaaaatcagaatctattttatgtttgttta 33872848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 47793206 - 47793296
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgttta 100  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| ||||||||||| | | |||||||| ||||||||||  |||||||||    
T  47793206 attaaaataaaagtgattttgacataaaataatttagagattatgttttagagattctttaaaaaatcagaatctattttatgtttgttta 47793296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 47796216 - 47796276
Alignment:
Q  55 ttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatca 115  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||| ||||||||||||||    
T  47796216 ttttagagattttatgaaaaatcagaatatattttgcgtttgcttaccgtaataaaaatca 47796276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 42834774 - 42834716
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatc 114  Q
    |||||||||||| |||||||||| |||||||||||| |||||||| |||||||||||||    
T  42834774 tttagagattttttgaaaaatcagaatctattttgcatttgtttaccgtaataaaaatc 42834716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 47795226 - 47795160
Alignment:
Q  47 agattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaat 113  Q
    ||||||| ||| ||||||||||| |||||||| ||||||||||||| ||||||| ||||||||||||    
T  47795226 agattatatttgagagattttataaaaaatcagaatctattttgcgcttgtttaccgtaataaaaat 47795160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 43114676 - 43114733
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaat 113  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| | ||||||||||    
T  43114676 tttagagattttatgaaaaatcataatctattttgtgtttatttatcataataaaaat 43114733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 6941284 - 6941344
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    |||||| |||||||||||||||| ||||||||||| ||||||||| ||| |||||||||||    
T  6941284 tttagaaattttatgaaaaatcagaatctattttgtgtttgtttaccgtgataaaaatcac 6941344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 6941772 - 6941704
Alignment:
Q  47 agattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatca 115  Q
    ||||||| |||||||||||||||||||||||| |||| |||||  |||| |||| ||||||||||||||    
T  6941772 agattatattttagagattttatgaaaaatcagaatcaattttctgtttatttaccgtaataaaaatca 6941704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 10338371 - 10338307
Alignment:
Q  5 ttacctattaaaataaaaatgattttgacataagataa-ttagagattattttttagagatttta 68  Q
    |||| ||||||||||||| |||||||||||||| |||| ||||||||||| ||||||||||||||    
T  10338371 ttacatattaaaataaaagtgattttgacataaaataatttagagattatattttagagatttta 10338307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 24705392 - 24705332
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||  || |||||||||||    
T  24705392 tttagagattttatgaaaaatcagaatctattttgtgtttgtttactgtgataaaaatcac 24705332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 47796652 - 47796592
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||| || ||||||||||||    
T  47796652 tttagagattttataaaaagtcagaatctattttgcgtttgtttaccgcaataaaaatcac 47796592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 42834839 - 42835001
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcacnnnnnnnaaa-agataatttaatttgtttggatccagct 154  Q
    |||||||||| |||||||||||| | | ||||||| ||||||||| | |||||||||||||       ||| | |||||||| |||||||||||  | ||    
T  42834839 tttagagattgtatgaaaaatcaaattatattttgtgtttgtttatcataataaaaatcacttttttaaaacaaataatttagtttgtttggat--aact 42834936  T
Q  155 gtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
     |||||||| ||       ||||||||||||||||||||||| |||  ||||||||||||||||||    
T  42834937 atataaaagggatttttt-gttacaaaattagttcaatcttttaatctatattttctctctcctct 42835001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 45807871 - 45807970
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| | ||||||| |||| |||||| ||||||||| |||||||||||||||||||       || || |||||||||||||| ||||||||    
T  45807871 attaaaataaaagtaattttgatataaaataatttagagattatattttagagattttatgaaa------tatttactttgcgtttgtttaccgtaataa 45807964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 49480401 - 49480238
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcacnnnnnnnaaaagataatttaatttgtttggatccagctg 155  Q
    ||||||||||||| ||||||| | ||||||||||||| ||||||| |||||| ||||| ||       || | ||||| || ||||||| ||| || ||     
T  49480401 tttagagattttaagaaaaattagaatctattttgcgattgtttaccgtaatgaaaataacttttttaaacaaataatctagtttgttttgatacaacta 49480302  T
Q  156 tataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    | |||||| ||       |||||||||||||||||||||||||| | |||||||| |||||||||    
T  49480301 tgtaaaag-gaattttttgttacaaaattagttcaatctttaaaatgatattttcgctctcctct 49480238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 7562032 - 7561988
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgttta 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||    
T  7562032 tttagagattttatgaaaaatcataatctattttatgtttgttta 7561988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 216
Target Start/End: Original strand, 49243665 - 49243869
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||  ||| |||||| ||||||||| ||| | |||||| ||||||||||| |||||||||||  |||||||| ||| ||||    
T  49243665 attaaaataaaagtgattttgatgtaaaataatttagagattatattt-atagattt-atgaaaaatcagaatctattttgtatttgtttaccgtgataa 49243762  T
Q  110 aaatcacnnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattt 208  Q
    |||| ||       ||| | ||||| || ||||||||||| || || |||||||| ||       ||||||||||||||||||||||| ||   ||||||    
T  49243763 aaattactttttttaaacaaataatctagtttgtttggatacaactatataaaaggga-ttttttgttacaaaattagttcaatcttttaaaagatattt 49243861  T
Q  209 tctctctc 216  Q
    ||||||||    
T  49243862 tctctctc 49243869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 116
Target Start/End: Complemental strand, 11982152 - 11982093
Alignment:
Q  57 ttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    |||||||||||||||||||||| ||||||||||  ||||||||  | |||||||||||||    
T  11982152 ttagagattttatgaaaaatcagaatctattttatgtttgttttccctaataaaaatcac 11982093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 47882240 - 47882287
Alignment:
Q  53 ttttttagagattttatgaaaaatcataatctattttgcgtttgttta 100  Q
    |||||||||||||||||||||||| | |||||||||| ||||||||||    
T  47882240 ttttttagagattttatgaaaaattagaatctattttacgtttgttta 47882287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 39842813 - 39842859
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    |||| |||||||||||||||||| || ||||||||||||||||||||    
T  39842813 gttagaaaattagttcaatcttttaaatcatattttctctctcctct 39842859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 47793168 - 47793122
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||| ||| |||||| ||||||||||||||||||||    
T  47793168 gttacaaaattagtttaatttttaaaatcatattttctctctcctct 47793122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 47795100 - 47795054
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    |||||||||||||||||| |||| || ||||||||||||||||||||    
T  47795100 gttacaaaattagttcaaacttttaaatcatattttctctctcctct 47795054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 8795545 - 8795480
Alignment:
Q  51 tattttttagagattttatgaaaaa-tcataatctattttgcgtttgtttaacgtaataaaaatca 115  Q
    ||||||||||||||||||| ||||| | | ||| ||||||||||||||||| || |||||||||||    
T  8795545 tattttttagagattttataaaaaaattagaatatattttgcgtttgtttatcgcaataaaaatca 8795480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 15597663 - 15597608
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaa 111  Q
    |||||||||||||| |||||| | ||| ||||||| ||||||||| ||||||||||    
T  15597663 tttagagattttataaaaaattaaaatatattttgtgtttgtttatcgtaataaaa 15597608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 45296932 - 45296873
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatca 115  Q
    |||||||||||||||||||| || ||| ||||||| ||||||||| | ||| ||||||||    
T  45296932 tttagagattttatgaaaaaccagaatgtattttgtgtttgtttaccataacaaaaatca 45296873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 12016892 - 12016938
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    |||| |||||||||||||||||| ||| |||||||| ||||||||||    
T  12016892 gttataaaattagttcaatcttttaatccatattttttctctcctct 12016938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 17054275 - 17054321
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||||||| ||   ||||||||||||||||||    
T  17054275 gttacaaaattagttcaatcttttaaacaatattttctctctcctct 17054321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 24705412 - 24705458
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||||||| ||   ||||||||||||||||||    
T  24705412 gttacaaaattagttcaatcttttaaaatatattttctctctcctct 24705458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 47795477 - 47795431
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||| ||||||||| || | ||||||||||||||||||    
T  47795477 gttacaaaattagctcaatcttttaaattatattttctctctcctct 47795431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 47795984 - 47796030
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||| ||||||||| || | ||||||||||||||||||    
T  47795984 gttacaaaattagctcaatcttttaaattatattttctctctcctct 47796030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 52404213 - 52404167
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    |||| ||||||||||||| |||| || ||||||||||||||||||||    
T  52404213 gttataaaattagttcaaacttttaaatcatattttctctctcctct 52404167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 6319227 - 6319170
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagatttt 67  Q
    |||||||||||||| |||||||||  | |||||| |||||||||||| ||||||||||    
T  6319227 attaaaataaaaataattttgacacgaaataatttagagattattttctagagatttt 6319170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 45296812 - 45296767
Alignment:
Q  175 ttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    |||||||||||||||||||||| ||   ||||||||||||||||||    
T  45296812 ttacaaaattagttcaatcttttaaactatattttctctctcctct 45296767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 7561868 - 7561928
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    |||||||||| || ||||||||| | ||||| |||| ||||| || |||||||||||||||    
T  7561868 tttagagattgtacgaaaaatcagattctatcttgcatttgtgtaccgtaataaaaatcac 7561928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 45378256 - 45378304
Alignment:
Q  47 agattattttttagagattttatgaaaaatcataatctattttgcgttt 95  Q
    ||||||| ||||||||||||||| |||||||| ||| ||||||| ||||    
T  45378256 agattatattttagagattttataaaaaatcagaatttattttgtgttt 45378304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 5e-40; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 220
Target Start/End: Complemental strand, 44434896 - 44434679
Alignment:
Q  5 ttacctattaaaataaaaatgattttgacataagataat-tagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacg 103  Q
    |||| ||||||||||||| |||||||||||||| ||||| |||||||||| |||||||||||||||||||||| | ||||||||||| ||||||||| ||    
T  44434896 ttacatattaaaataaaagtgattttgacataaaataatatagagattatattttagagattttatgaaaaattagaatctattttgtgtttgtttaccg 44434797  T
Q  104 taataaaaatcacnnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattc 202  Q
    |||||||||||||       ||| | |||||||| ||||||||||| || || |||||||| ||       | ||||||| || |||||||||| |||||    
T  44434796 taataaaaatcacttttttaaaacaaataatttagtttgtttggatacaactatataaaagagatatttttgatacaaaactatttcaatcttttaattc 44434697  T
Q  203 atattttctctctcctct 220  Q
    ||| ||||||||||||||    
T  44434696 ataatttctctctcctct 44434679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 33858205 - 33858098
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattatttttt-agagattttatgaaaaatcataatctattttgcgtttgtttaacgtaata 108  Q
    |||||||||||| |||||||||||||| |||||| |||||||||||||| |||||||||||||||||||| ||| |||||||| |||||||| |||||||    
T  33858205 attaaaataaaagtgattttgacataaaataatttagagattatttttttagagattttatgaaaaatcagaatttattttgcctttgtttatcgtaata 33858106  T
Q  109 aaaatcac 116  Q
    ||||||||    
T  33858105 aaaatcac 33858098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 1644419 - 1644525
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||| | ||    
T  1644419 attaaaataaaagtgattttgacataaaataatttaaagattatattttagagattttatgaaaaatcataatctattttgcgtttgtttcccgtgaaaa 1644518  T
Q  110 aaatcac 116  Q
    |||||||    
T  1644519 aaatcac 1644525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 213
Target Start/End: Original strand, 4399545 - 4399748
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    ||||||| |||| ||||||||| |||| |||||| |||||||| ||||| ||||||||||||||||||| ||||||||||| | ||||||| | ||||||    
T  4399545 attaaaacaaaagtgattttgatataaaataatttagagattaattttttgagattttatgaaaaatcagaatctattttgtg-ttgtttatcttaataa 4399643  T
Q  110 aaatcac-nnnnnnnaaaagataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattt 208  Q
    |||||||        |||| |||||||| ||||||||||| || || ||||||||| |        |||||||||||||||||||||||||| |||||||    
T  4399644 aaatcactttttctaaaaaaataatttagtttgtttggatacaactatataaaagcaattttttttttacaaaattagttcaatctttaaatccatattt 4399743  T
Q  209 tctct 213  Q
    |||||    
T  4399744 tctct 4399748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 212
Target Start/End: Original strand, 24689225 - 24689428
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| ||||||||||||| |||||||||| ||| ||||||||||||| ||| | ||||||    
T  24689225 attaaaataaaagtgattttgacataaaataatttagagattatattttagagattttctgaaaaatcagaatttattttgcgtttgcttaccctaataa 24689324  T
Q  110 aaatcacnnnnnnnaaaagataatttaatttgtttggatccagctgtataaaagcga-nnnnnnngttacaaaattagttcaatctttaaattcatattt 208  Q
    |||||||       || | ||||| || ||||||||||| || || |||||||| ||        ||||||||||||||||||||||| || | ||||||    
T  24689325 aaatcacttttttaaacaaataatctagtttgtttggatacaactatataaaagagattttttttgttacaaaattagttcaatcttttaaataatattt 24689424  T
Q  209 tctc 212  Q
    ||||    
T  24689425 tctc 24689428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 15640253 - 15640343
Alignment:
Q  11 attaaaataaaaatgattttgacataagataa-ttagagattattttttagagattttatgaaaaatcataatctattttgcgtttgttta 100  Q
    |||||||||||| ||||||| || ||| |||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  15640253 attaaaataaaagtgattttcacgtaaaataaattagagattatattttagagattttatgaaaaatcagaatctattttgcgtttgttta 15640343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 15641199 - 15641094
Alignment:
Q  12 ttaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaa 110  Q
    ||||||||||| |||||||||||| | |||||| |||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||  ||||  |||    
T  15641199 ttaaaataaaagtgattttgacatcaaataatttagagattattttctagagattttatgaaaaatcagaatctattttgtgtttgttttgcgtagaaaa 15641100  T
Q  111 aatcac 116  Q
    ||||||    
T  15641099 aatcac 15641094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 113
Target Start/End: Complemental strand, 14312665 - 14312563
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| ||||||| | |||| |||||| ||||||||||||||||||||||||| |||||| | ||||||||||||||||||||| || |||||    
T  14312665 attaaaataaaagtgatttttatataa-ataatttagagattattttttagagattttattaaaaataagaatctattttgcgtttgtttaccgcaataa 14312567  T
Q  110 aaat 113  Q
    ||||    
T  14312566 aaat 14312563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 220
Target Start/End: Complemental strand, 26246802 - 26246625
Alignment:
Q  43 ttagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcacnnnnnnnaaa-agataatttaatttg 141  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||| | ||||||||| |||       ||| | ||||| |||||||    
T  26246802 ttagagattatattttagagattttataaaaaatcagaatctattttgcgtttgtttaccataataaaaaacactttttgtaaacaaataatctaatttg 26246703  T
Q  142 tttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||| || || |||||||| ||       ||||||||||||||| ||||||| ||  | |||||||||||||||||    
T  26246702 tttggatacaactttataaaagaga-ttttttgttacaaaattagtttaatcttttaaaccctattttctctctcctct 26246625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 26970604 - 26970707
Alignment:
Q  11 attaaaataaaaatgattt-tgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaata 108  Q
    |||||||||||| |||||| | |||||| |||||| ||||||||| ||||||||||||||||| |||||| ||||||||||| ||||||||| |||||||    
T  26970604 attaaaataaaagtgatttattacataaaataatttagagattatattttagagattttatgataaatcagaatctattttgtgtttgtttatcgtaata 26970703  T
Q  109 aaaa 112  Q
    ||||    
T  26970704 aaaa 26970707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 30122079 - 30121915
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcacnnnnnnnaaa-agataatttaatttgtttggatccagct 154  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| | |||||||||||||       ||| | |||||||| ||||||||||| || ||    
T  30122079 tttagagattttatgaaaaatcagaatctattttgtgtttgtttaccataataaaaatcactttgttaaaacaaataatttagtttgtttggatacaact 30121980  T
Q  155 gtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
     |||||||  ||       ||||||||||||||||||||||| ||| ||||||||||| |||||||    
T  30121979 atataaaa-agaattttttgttacaaaattagttcaatcttttaatccatattttctccctcctct 30121915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 114
Target Start/End: Complemental strand, 37986170 - 37986099
Alignment:
Q  43 ttagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatc 114  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||| |||||||||||||    
T  37986170 ttagagattattttttagagattttataaaaaatcagaatctattttgcgtttgcttaccgtaataaaaatc 37986099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 10282887 - 10282797
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgttta 100  Q
    |||||||||||| ||||||||||||   |||||| ||||||||||||||||||||||||  |||||||| |||||||||||||||||||||    
T  10282887 attaaaataaaagtgattttgacattgaataatttagagattattttttagagattttagaaaaaatcacaatctattttgcgtttgttta 10282797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 28974827 - 28974933
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| | |||||||||||| | |||| |||||||||||||||||||||||||||||||  | ||||||||||| ||||||||  | ||||||    
T  28974827 attaaaataaaattcattttgacataaaacaatttagagattattttttagagattttatgaaaaactagaatctattttgtgtttgttttccataataa 28974926  T
Q  110 aaatcac 116  Q
    |||||||    
T  28974927 aaatcac 28974933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 45447786 - 45447681
Alignment:
Q  11 attaaaataaaaatgattttgacataagataat-tagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| ||||||| |||||| ||||| |||||||||| |||||| ||||||||||||||||| |||| |||||| ||||||||| | | ||||    
T  45447786 attaaaataaaagtgattttaacataaaataatctagagattatattttagtgattttatgaaaaatcaaaatccattttgtgtttgtttaccattataa 45447687  T
Q  110 aaatca 115  Q
    ||||||    
T  45447686 aaatca 45447681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 192
Target Start/End: Complemental strand, 5801215 - 5801069
Alignment:
Q  47 agattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcacnnnnnnnaaa-agataatttaatttgtttg 145  Q
    ||||||| |||||||||||||||||||||| | ||||||||||| ||||||||| |||||||||||||||       ||| | |||||||| ||||||||    
T  5801215 agattatattttagagattttatgaaaaattagaatctattttgtgtttgtttaccgtaataaaaatcactttttttaaacaaataatttagtttgtttg 5801116  T
Q  146 gatccagctgtataaaagcgannnnnnngttacaaaattagttcaat 192  Q
    ||| || || |||||||| ||       |||||||||||||||||||    
T  5801115 gatacaactatataaaagagatttttttgttacaaaattagttcaat 5801069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 47222715 - 47222639
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctat 86  Q
    |||||||||||| ||||||| |||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  47222715 attaaaataaaagtgattttcacataaaataatttagagattatattttagagattttatgaaaaatcataatctat 47222639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 23809141 - 23809035
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| | |||||||||||| |||||| | ||||||| |||||||||||||||||| ||| ||||||||||  | ||||||||| || |||||    
T  23809141 attaaaataaaagttattttgacataaaataatttatagattatattttagagattttatgaataattataatctattcagtgtttgtttaccgcaataa 23809042  T
Q  110 aaatcac 116  Q
    |||||||    
T  23809041 aaatcac 23809035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 10282642 - 10282582
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    ||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||    
T  10282642 tttagagattttatgaaaaatcagaatctatttttcgtttgtttatcgtaataaaaatcac 10282582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 21696997 - 21696893
Alignment:
Q  13 taaaataaaaatgattttgacataagataatta-gagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaa 111  Q
    |||||||||| ||||||| |||||| || |||| |||||||| |||||||||||| || |||||||| |||||||||| |||||||||| |  |||||||    
T  21696997 taaaataaaattgattttcacataaaatcattaagagattatattttagagatttaataaaaaatcagaatctattttacgtttgtttaccacaataaaa 21696898  T
Q  112 atcac 116  Q
    |||||    
T  21696897 atcac 21696893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 24689706 - 24689636
Alignment:
Q  46 gagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    |||||||| |||||||||||||||||||||||| |||||||||| ||||| ||||  ||||||||||||||    
T  24689706 gagattatattttagagattttatgaaaaatcagaatctattttacgtttatttattgtaataaaaatcac 24689636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 29102562 - 29102652
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgttta 100  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||||| ||||||| | | |||||||| ||||||||||  |||||||||    
T  29102562 attaaaataaaattgattttgacataaaataatttagagattatttttcagagattctttaaaaaatcaaaatctattttttgtttgttta 29102652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 24162336 - 24162279
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaat 113  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||    
T  24162336 tttagagattttatgaaaaatcagaatctattttgcatttgtttaccgtaataaaaat 24162279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 30122270 - 30122346
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctat 86  Q
    |||||||||||| | |||||||||||| || ||| ||| |||||||||||| |||||||||||||||||||||||||    
T  30122270 attaaaataaaagtaattttgacataaaatcatttagaaattattttttagggattttatgaaaaatcataatctat 30122346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 35526365 - 35526452
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtt 98  Q
    |||||||||||| ||||||  |||||| |||||| ||||||||| |||||||||||||||||||||||| |||||| |||||| |||||    
T  35526365 attaaaataaaagtgattta-acataaaataatttagagattatattttagagattttatgaaaaatcagaatctaatttgcgattgtt 35526452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 4594668 - 4594609
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatca 115  Q
    |||| |||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  4594668 tttaaagatattatgaaaaatcagaatctattttgcgtttgtttaccgtaataaaaatca 4594609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 23640917 - 23640754
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcacnnnnnnnaaa-agataatttaatttgtttggatccagct 154  Q
    ||||||||||||||||||| ||| ||||||||||| | ||||||| | |||||||||||||       ||| | ||||||||||||| |||||| || ||    
T  23640917 tttagagattttatgaaaa-tcagaatctattttgtgcttgtttaccataataaaaatcacttttttaaaacaaataatttaatttggttggatacaact 23640819  T
Q  155 gtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
     |||||||| ||        |||||||||||||||||||||| |||  ||||||||||||||||||    
T  23640818 ctataaaagagattttttt-ttacaaaattagttcaatcttttaatctatattttctctctcctct 23640754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 26127925 - 26127835
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgttta 100  Q
    ||||||||||||||  |||| | |||| || ||| |||||||| |||||||||||||||| |||||||| ||||||||||| |||||||||    
T  26127925 attaaaataaaaatagttttcatataaaattatttagagattaatttttagagattttataaaaaatcagaatctattttgtgtttgttta 26127835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 24688950 - 24688889
Alignment:
Q  55 ttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    ||||||||||||||| |||||| | ||||||||||||||||||||| ||| |||||||||||    
T  24688950 ttttagagattttataaaaaattagaatctattttgcgtttgtttaccgtgataaaaatcac 24688889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 35527399 - 35527452
Alignment:
Q  60 gagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaat 113  Q
    ||||||||||||||||||| ||||||||||||||||||||| | ||||||||||    
T  35527399 gagattttatgaaaaatcagaatctattttgcgtttgtttaccctaataaaaat 35527452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 11749971 - 11750027
Alignment:
Q  55 ttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaa 111  Q
    |||||||||||||||| |||||||||||||||||||| |||||||| |||| |||||    
T  11749971 ttttagagattttatgtaaaatcataatctattttgcatttgtttatcgtactaaaa 11750027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 31277359 - 31277419
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||| || ||||||||||||    
T  31277359 tttagagattttatgaaaaatcagaatttattttgcatttgtttaccgcaataaaaatcac 31277419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 12216854 - 12216960
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttat-gaaaaatcataatctattttgcgtttgtttaacgtaata 108  Q
    |||||||||||| ||||||||| ||   |||||| ||||||||| |||||||||||||||  |||||||| ||| |||||||| |||||||| || ||||    
T  12216854 attaaaataaaagtgattttgatattgaataatttagagattatgttttagagattttataaaaaaatcagaatttattttgcatttgtttagcg-aata 12216952  T
Q  109 aaaatcac 116  Q
    ||||||||    
T  12216953 aaaatcac 12216960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 10282989 - 10283079
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgttta 100  Q
    |||||||||||| ||||||| ||||   |||||| | | ||||||||||||||||| ||| |||||||| |||||||||||||||| ||||    
T  10282989 attaaaataaaagtgattttcacattgaataatttataaattattttttagagattatataaaaaatcacaatctattttgcgttttttta 10283079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 19611043 - 19611100
Alignment:
Q  27 ttttgacataagataatt-agagattattttttagagattttatgaaaaatcataatc 83  Q
    ||||||||||| |||||| |||||||||||| ||||||||||||||||||||| ||||    
T  19611043 ttttgacataaaataatttagagattattttatagagattttatgaaaaatcaaaatc 19611100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 16174944 - 16175016
Alignment:
Q  19 aaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttg 90  Q
    |||||||||||||||||   |||||| ||||||||||||||||||| |||||| |||| ||||||| ||||||    
T  16174944 aaaaatgattttgacatttaataatttagagattattttttagagactttatgcaaaagcataatcaattttg 16175016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 29854599 - 29854659
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    |||| ||||| |||||||||||| ||||||||||| ||||||||| | |||||||||||||    
T  29854599 tttaaagattatatgaaaaatcagaatctattttgtgtttgtttaccataataaaaatcac 29854659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 5373103 - 5373052
Alignment:
Q  49 attattttttagagattttatgaaaaatcataatctattttgcgtttgttta 100  Q
    |||||||| ||||||||||||||||||||| |||  ||||||||||||||||    
T  5373103 attattttatagagattttatgaaaaatcagaattcattttgcgtttgttta 5373052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 22644714 - 22644769
Alignment:
Q  11 attaaaataaaaatgattttgacataagataa-ttagagattattttttagagatt 65  Q
    |||||||||||| |||||||||||||| |||| ||||||||||| |||||||||||    
T  22644714 attaaaataaaagtgattttgacataaaataatttagagattatgttttagagatt 22644769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 30121320 - 30121366
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  30121320 gttacaaaattagttcaatcttttaaattatattttctctctcctct 30121366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 40261849 - 40261891
Alignment:
Q  43 ttagagattattttttagagattttatgaaaaatcataatcta 85  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  40261849 ttagagattatattttagagattttatgaaaaatcagaatcta 40261891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 30122130 - 30122167
Alignment:
Q  78 ataatctattttgcgtttgtttaacgtaataaaaatca 115  Q
    |||||||||||||| |||||||||||||||||||||||    
T  30122130 ataatctattttgcatttgtttaacgtaataaaaatca 30122167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 10282911 - 10282955
Alignment:
Q  72 aaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    |||||||||||||||||||| ||| |||| |||||||||||||||    
T  10282911 aaaatcataatctattttgcatttctttaccgtaataaaaatcac 10282955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 26178236 - 26178160
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctat 86  Q
    |||||||||||| | ||||| || ||| || ||| | |||||||||||||||||||||||||||||| | |||||||    
T  26178236 attaaaataaaagtcattttcacgtaaaattatttatagattattttttagagattttatgaaaaatgagaatctat 26178160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 35223717 - 35223757
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttg 96  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  35223717 tttagagattttatgaaaaattagaatctattttgcgtttg 35223757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 1304711 - 1304802
Alignment:
Q  19 aaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| ||||   |||||| ||| | ||||||||||||| ||||||||||| ||||||| |||||| | || |||| ||||||||    
T  1304711 aaaaatgatttttacattcaataatttagatactattttttagagactttatgaaaaagcataatcaattttgtgattatttatcgtaataa 1304802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 47222582 - 47222539
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcc 217  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||    
T  47222582 gttacaaaattagttcaatcttttaaaccatattttctctctcc 47222539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 21696520 - 21696562
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctc 216  Q
    |||||||||||||||||||||||  | ||||||||||||||||    
T  21696520 gttacaaaattagttcaatcttttgaatcatattttctctctc 21696562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 24688831 - 24688785
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||| ||||||||||||||||| ||  |||||||||||||||||||    
T  24688831 gttaccaaattagttcaatcttttaaaccatattttctctctcctct 24688785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 26970459 - 26970413
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||| ||| || ||||||||| ||||||||||    
T  26970459 gttacaaaattagttcaatgttttaaatcatattttatctctcctct 26970413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 26970771 - 26970817
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||||||| ||   ||||||||||||||||||    
T  26970771 gttacaaaattagttcaatcttttaaacaatattttctctctcctct 26970817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 115
Target Start/End: Complemental strand, 27756444 - 27756402
Alignment:
Q  73 aaatcataatctattttgcgtttgtttaacgtaataaaaatca 115  Q
    |||||| ||||||||| ||||||||||| ||||||||||||||    
T  27756444 aaatcagaatctatttagcgtttgtttaccgtaataaaaatca 27756402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 38319993 - 38320039
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||||||| ||  |||||||||| ||||||||    
T  38319993 gttacaaaattagttcaatcttttaaaccatattttctatctcctct 38320039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 15641691 - 15641659
Alignment:
Q  11 attaaaataaaaatgattttgacataagataat 43  Q
    ||||||||||||||||||||||||||| |||||    
T  15641691 attaaaataaaaatgattttgacataaaataat 15641659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 18989477 - 18989422
Alignment:
Q  53 ttttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    ||||||||||||||||| ||||| || ||||||||||| | ||||||| ||||||||    
T  18989477 ttttttagagattttataaaaaaacagaatctattttgtg-ttgtttatcgtaataa 18989422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 18999291 - 18999236
Alignment:
Q  53 ttttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    ||||||||||||||||| ||||| || ||||||||||| | ||||||| ||||||||    
T  18999291 ttttttagagattttataaaaaaacagaatctattttgtg-ttgtttatcgtaataa 18999236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 29834498 - 29834573
Alignment:
Q  43 ttagagattattt--tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    |||||||||||||  |||||||||||||| |||||| | ||||||||||   ||| ||||  ||||||||||||||    
T  29834498 ttagagattatttcttttagagattttattaaaaattagaatctattttatatttatttattgtaataaaaatcac 29834573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 116
Target Start/End: Original strand, 30121231 - 30121263
Alignment:
Q  84 tattttgcgtttgtttaacgtaataaaaatcac 116  Q
    ||||||||||||||||| |||||||||||||||    
T  30121231 tattttgcgtttgtttaccgtaataaaaatcac 30121263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 35526821 - 35526765
Alignment:
Q  11 attaaaataaaaatgattttgacataagataa-ttagagattattttttagagattt 66  Q
    |||||||||| | |||||||||||||| |||| ||| |||||||||| |||||||||    
T  35526821 attaaaataatactgattttgacataaaataatttatagattattttatagagattt 35526765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 7239098 - 7238888
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  7239098 attaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcataatctattttgcatttgtttaccgtaataa 7238999  T
Q  110 aaatcacnnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattt 208  Q
    ||||||        ||| | ||||| || ||||||||||| || || |||||||| ||       ||||||||||||||||||||||| ||   ||||||    
T  7238998 aaatcattttttttaaacaaataatctagtttgtttggatacaactatataaaaggga-atttttgttacaaaattagttcaatcttttaaacaatattt 7238900  T
Q  209 tctctctcctct 220  Q
    ||||||||||||    
T  7238899 tctctctcctct 7238888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 54175721 - 54175930
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| |||||||||  |||| |||||||||||||||||| |||||||||||||||| |||| |||| |||    
T  54175721 attaaaataaaagtgattttgacataaaataatttagagattataatttacagattttatgaaaaatcagaatctattttgcgtttttttaccgtactaa 54175820  T
Q  110 aaatcacnnnnnnnaaaagataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatatttt 209  Q
    |||||||       || | ||||| || ||||||||||| || || |||||||| ||       ||||||||||||||||||||||| ||  ||||||||    
T  54175821 aaatcactttttaaaataaataatctagtttgtttggatacaactatataaaaggga-ttttttgttacaaaattagttcaatcttttaaaccatatttt 54175919  T
Q  210 ctctctcctct 220  Q
    |||||||||||    
T  54175920 ctctctcctct 54175930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 19298725 - 19298513
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||  ||||| | |||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |   ||||    
T  19298725 attaaaataaaagtgatttttgcataaaagaatttagagattatattttagagattttatgaaaaatcagaatctattttgcgtttgtttaccacgataa 19298626  T
Q  110 aaatcacnnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcga-nnnnnnngttacaaaattagttcaatctttaaattcatatt 207  Q
    |||||||       ||| | |||||||| |||||||| || || || |||||||| ||        ||||||||||||||||||||||| || |||||||    
T  19298625 aaatcactttttttaaacaaataatttagtttgtttgaatacaactatataaaagggattttttttgttacaaaattagttcaatcttttaaatcatatt 19298526  T
Q  208 ttctctctcctct 220  Q
    |||||||||||||    
T  19298525 ttctctctcctct 19298513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 27839171 - 27839065
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    ||||||||||||  ||||||||||||| |||||| ||||||| | |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||    
T  27839171 attaaaataaaagagattttgacataaaataatttagagattgtattttagagattttatgaaaaatcagaatttattttgcgtttgtttaccgtaataa 27839072  T
Q  110 aaatcac 116  Q
    |||||||    
T  27839071 aaatcac 27839065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 54807055 - 54806949
Alignment:
Q  11 attaaaataaaaatgattttgacataagataa-ttagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||| ||||||||||| ||||||||||||| |||||||||| |||||||||||  |||||||| ||||||||    
T  54807055 attaaaataaaagtgattttgacataaaataagttagagattatattttagagattttgtgaaaaatcagaatctattttgtatttgtttaccgtaataa 54806956  T
Q  110 aaatcac 116  Q
    |||||||    
T  54806955 aaatcac 54806949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 32500147 - 32500252
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| ||||||| | |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| || |    
T  32500147 attaaaataaaagtgattttaatataaaataatttagagattattttttagagattttatgaaaaatcataatctattttacgtttgtttaccgtgatta 32500246  T
Q  110 aaatca 115  Q
    ||||||    
T  32500247 aaatca 32500252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 2494285 - 2494182
Alignment:
Q  12 ttaaaataaaaatgattttgacataagataattagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaa 111  Q
    ||||||||||| |||||||||||||| ||||| ||| ||||| |||||||||||||||||||||| | ||||||||||||||||||||| |||| |||||    
T  2494285 ttaaaataaaattgattttgacataaaataat-agatattatattttagagattttatgaaaaataagaatctattttgcgtttgtttaccgtagtaaaa 2494187  T
Q  112 atcac 116  Q
    |||||    
T  2494186 atcac 2494182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 9518909 - 9519011
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||| ||||||| |||||| ||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||| ||| ||||    
T  9518909 attaaaataaaagtgatttagacataaaataatttagagattatattttagagattttgtgaaaaatcagaatctattttgcgtttgtttaccgtgataa 9519008  T
Q  110 aaa 112  Q
    |||    
T  9519009 aaa 9519011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 5029182 - 5028972
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||| ||| |||||| ||||||||| ||||||||||||| |||||||||| |||||||||| | ||||| || ||| ||||    
T  5029182 attaaaataaaagtgattttgacgtaaaataatttagagattatattttagagattttttgaaaaatcaaaatctattttacatttgtataccgtgataa 5029083  T
Q  110 aaatcacnnnnnnnaaaa-gataatttaatttgtttggatccagctgtataaaagcga-nnnnnnngttacaaaattagttcaatctttaaattcatatt 207  Q
    |||||||       ||||  || ||||||||||||||||| || || |||| ||| ||        ||| ||||||||||||||||||  || |||||||    
T  5029082 aaatcactttttttaaaacaattatttaatttgtttggatacaactatatacaagggattttatttgttccaaaattagttcaatctt--aaatcatatt 5028985  T
Q  208 ttctctctcctct 220  Q
    |||||||||||||    
T  5028984 ttctctctcctct 5028972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 39136240 - 39136149
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaa 101  Q
    |||||||||||| ||||||||| |||| |||||| ||||||||| ||||||||||||| | |||||||| ||||||||||||||||||||||    
T  39136240 attaaaataaaagtgattttgagataaaataatttagagattatattttagagattttttaaaaaatcagaatctattttgcgtttgtttaa 39136149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 7070686 - 7070580
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| | ||||| ||||||| |||||||||||||||| | |||||||||||||||| ||| | || ||||    
T  7070686 attaaaataaaagtgattttgacataaaataatttaaagattcttttttaaagattttatgaaaaattaaaatctattttgcgtttctttcatgtgataa 7070587  T
Q  110 aaatcac 116  Q
    |||||||    
T  7070586 aaatcac 7070580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 36889880 - 36889774
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    ||||||||||||  |||||||| || | || ||| ||||||||||||||| | ||||||||||||||||||||||||| || ||||||||| ||||||||    
T  36889880 attaaaataaaagcgattttgatattaaattatttagagattattttttaaaaattttatgaaaaatcataatctattgtgtgtttgtttaccgtaataa 36889781  T
Q  110 aaatcac 116  Q
    |||||||    
T  36889780 aaatcac 36889774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 39476335 - 39476405
Alignment:
Q  43 ttagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaat 113  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||| ||||||||||||    
T  39476335 ttagagattattttttagagattttataaaaaatcagaatctattttgcgtttgcttaccgtaataaaaat 39476405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 43495711 - 43495817
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| ||||||| |||||| |||||| ||| ||||| ||||||||||| |||||||||||| | ||||||||||||||||||| |  |||||    
T  43495711 attaaaataaaagtgattttcacataaaataatttagatattatattttagagattgtatgaaaaatcagattctattttgcgtttgtttaccacaataa 43495810  T
Q  110 aaatcac 116  Q
    |||||||    
T  43495811 aaatcac 43495817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 44886104 - 44886268
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcacnnnnnnnaaaagataatttaatttgtttggatccagctg 155  Q
    |||||| ||| |||||||||||| ||| ||||||||||||||||| ||| |||||||| ||       || | |||||||| ||| ||||||| || ||     
T  44886104 tttagaaattatatgaaaaatcagaatttattttgcgtttgtttaccgtgataaaaattacttttttaaacaaataatttagtttttttggatacaacta 44886203  T
Q  156 tataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    |||||||| ||       ||||||||||||||||||||||| || ||||||||||||||||||||    
T  44886204 tataaaagggatttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 44886268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 113
Target Start/End: Original strand, 12928436 - 12928539
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||| ||| |||||| |||||||||||| ||||||||| || |||||||| ||| ||||||| ||||||||| |||| |||    
T  12928436 attaaaataaaagtgattttgacgtaaaataatttagagattattttgtagagatttaataaaaaatcagaatttattttgtgtttgtttatcgtagtaa 12928535  T
Q  110 aaat 113  Q
    ||||    
T  12928536 aaat 12928539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 50715607 - 50715772
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcacnnnnnnnaaa-agataatttaatttgtttggatccagct 154  Q
    |||||||||||| |||||||||| ||||||||||||||||| ||| | ||| |||||||||       ||| | |||||||||||||||||||| || ||    
T  50715607 tttagagattttgtgaaaaatcagaatctattttgcgtttgcttaccataagaaaaatcactttttctaaacaaataatttaatttgtttggatacacct 50715706  T
Q  155 gtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
     |||||||| ||       |||||||||||||||||||||||  |   ||||||||||||||||||    
T  50715707 atataaaagggatttttttgttacaaaattagttcaatctttttaaatatattttctctctcctct 50715772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 660054 - 660159
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| ||||||| || ||| |||||| | | ||||| |||||||||||||||||||||| | |||||||||||||||||||||   ||||||    
T  660054 attaaaataaaagtgattttcacgtaaaataatttaaaaattatattttagagattttatgaaaaattagaatctattttgcgtttgtttacgttaataa 660153  T
Q  110 aaatca 115  Q
    ||||||    
T  660154 aaatca 660159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 41692319 - 41692424
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| ||| || | ||||||| ||||||  |||||||||||||| | ||| |||||||||||| |||| ||||||||    
T  41692319 attaaaataaaagtgattttgacataaaatactttaaagattatattttagtaattttatgaaaaattaaaatttattttgcgtttttttaccgtaataa 41692418  T
Q  110 aaatca 115  Q
    ||||||    
T  41692419 aaatca 41692424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 113
Target Start/End: Original strand, 49866991 - 49867094
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||| ||||||| |||||||||||||| |||||| ||| ||||  ||||||||||||||| |||| ||| ||| ||||||||||||||||| ||| ||||    
T  49866991 attagaataaaagtgattttgacataaaataatttagatattacattttagagattttataaaaagtcagaatttattttgcgtttgtttaccgttataa 49867090  T
Q  110 aaat 113  Q
    ||||    
T  49867091 aaat 49867094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 220
Target Start/End: Complemental strand, 49897528 - 49897351
Alignment:
Q  43 ttagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcacnnnnnnnaaa-agataatttaatttg 141  Q
    ||||||||||| |||| ||||||||||||||||||| ||| |||||||  |||||||| |||||||||||||||       ||| | ||||| || ||||    
T  49897528 ttagagattatattttcgagattttatgaaaaatcagaatttattttgtatttgtttaccgtaataaaaatcactttttaaaaataaataatctagtttg 49897429  T
Q  142 tttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||| || || |||||||| ||       ||||||||||||||||||||||| ||   |||||||||| |||||||    
T  49897428 tttggatacaactatataaaaggga-ttatttgttacaaaattagttcaatcttttaaacaatattttctccctcctct 49897351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 16877065 - 16877139
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatct 84  Q
    |||||||||||| ||||| | |||||| |||||| |||||||||||||||||||||||||||||||||| |||||    
T  16877065 attaaaataaaagtgattataacataaaataatttagagattattttttagagattttatgaaaaatcaaaatct 16877139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 45032412 - 45032322
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgttta 100  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| ||||||||||| | | |||||||| ||||||||||  |||||||||    
T  45032412 attaaaataaaagtgattttgacataaaataatttagagattatgttttagagattctttaaaaaatcagaatctattttatgtttgttta 45032322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 215
Target Start/End: Original strand, 13222114 - 13222272
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcacnnnnnnnaaaagataatttaatttgtttggatccagctg 155  Q
    |||||||||||||| |||||| | || |||||||||||||||||| | |||||||| ||||       |||| |||||||| ||||||| ||| ||| |     
T  13222114 tttagagattttataaaaaattagaacctattttgcgtttgtttaccttaataaaa-tcactttttttaaaaaataatttagtttgtttagatacagtta 13222212  T
Q  156 tataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattttctctct 215  Q
    |||||||| ||       |||||||||||||||||||||||  || ||||||||||||||    
T  13222213 tataaaagtgatttttttgttacaaaattagttcaatcttttgatccatattttctctct 13222272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 36638782 - 36638694
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgttt 99  Q
    |||||||||||||||||||| |||||| |||||| ||||||||| ||||||||||||||||||| ||||  ||||| ||| |||||||||    
T  36638782 attaaaataaaaatgattttcacataaaataatttagagattatattttagagattttatgaaatatca-gatctaatttacgtttgttt 36638694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 53140146 - 53140245
Alignment:
Q  11 attaaaataaaaatgattttgacataagataattagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaa 110  Q
    |||||||||||| |||||||||||||| |||||| |||||||| || || |||||||||||||||  |  || ||||||| |||||||||  ||||||||    
T  53140146 attaaaataaaactgattttgacataaaataatttgagattatattataaagattttatgaaaaaataggatatattttgtgtttgtttacggtaataaa 53140245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 37243623 - 37243551
Alignment:
Q  43 ttagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    ||||||||||||||| ||||||||||| |||||||| |||||||||||||||| |||| |  ||||||||||||    
T  37243623 ttagagattattttt-agagattttataaaaaatcagaatctattttgcgtttatttaccaaaataaaaatcac 37243551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 42816137 - 42816080
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaat 113  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| ||| ||||||||    
T  42816137 tttagagattttatgaaaaatcagaatctattttgtgtttgtttaccgtgataaaaat 42816080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 41103931 - 41103991
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||  |||| |||||||||    
T  41103931 tttagagattttatgaaaaatcaaaatctattttgtgtttgtttacggtaacaaaaatcac 41103991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 46255132 - 46255192
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    |||||||||| |||||||||||| ||||||||||| |||||||||  ||||||||||||||    
T  46255132 tttagagattatatgaaaaatcagaatctattttgtgtttgtttacggtaataaaaatcac 46255192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 33803016 - 33802970
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  33803016 gttacaaaattagttcaatcttttaatacatattttctctctcctct 33802970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 37813244 - 37813147
Alignment:
Q  19 aaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    |||||||||||||||||   |||||| ||||||||||||| ||| ||||||||||||| ||||||| | |||| ||||||| | |||||||| ||||||    
T  37813244 aaaaatgattttgacattcaataatttagagattattttt-agatattttatgaaaaaacataatcaactttgtgtttgttaatcgtaataacaatcac 37813147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 24739228 - 24739169
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    |||||||||||||| |||||||| |||| |||||||||||||||| | |||||||||||||    
T  24739228 tttagagattttat-aaaaatcagaatccattttgcgtttgtttaccataataaaaatcac 24739169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 42314626 - 42314524
Alignment:
Q  17 ataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaa--tcataatctattttgcgtttgtttaacgtaataaaaat 113  Q
    |||||| |||||||||||| | |||||| ||| |||||||| |||||||| ||  |||||  ||||||||||||||| ||||||||| | | ||||||||    
T  42314626 ataaaagtgattttgacattaaataatttagaaattattttgtagagattctaaaaaaaaattcataatctattttgtgtttgtttaccttgataaaaat 42314527  T
Q  114 cac 116  Q
    |||    
T  42314526 cac 42314524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 9519069 - 9519115
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||||||| || |||||||||| |||||||||    
T  9519069 gttacaaaattagttcaatcttttaaatcatattttccctctcctct 9519115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 40796303 - 40796201
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| | |||||||||  | ||| || | ||| |||||| ||||||||||||||||||||| ||| |||||||| ||||| ||  |||||||    
T  40796303 attaaaataaaagtaattttgacaacaaatattttaaagactattttatagagattttatgaaaaatcagaatttattttgcatttgtctattgtaataa 40796204  T
Q  110 aaa 112  Q
    |||    
T  40796203 aaa 40796201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 41104048 - 41104094
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||||||| || ||||||||||||| ||||||    
T  41104048 gttacaaaattagttcaatcttttaaatcatattttctctttcctct 41104094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 41692483 - 41692529
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    |||||||||||| |||||||||| || ||||||||||||||||||||    
T  41692483 gttacaaaattaattcaatcttttaaatcatattttctctctcctct 41692529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 29100876 - 29100921
Alignment:
Q  175 ttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    |||||||||||||||||||||| || | ||||||||||||||||||    
T  29100876 ttacaaaattagttcaatcttttaaattatattttctctctcctct 29100921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 49867154 - 49867198
Alignment:
Q  176 tacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    |||||||||||||||||||||| || ||||||||||| |||||||    
T  49867154 tacaaaattagttcaatctttagatccatattttctcactcctct 49867198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 39136100 - 39136054
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||| |||||||||||| || || ||||||||||||||||||||    
T  39136100 gttacaatattagttcaatcgtttaaatcatattttctctctcctct 39136054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 40956788 - 40956886
Alignment:
Q  19 aaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    |||||||||||||||||   ||| || | |||||||||||||||||  |||| |||||| |||||| |||||| |||| |||| | |||||| ||||||    
T  40956788 aaaaatgattttgacattctatagttcaaagattattttttagagacattattaaaaattataatcaattttgtgtttttttatcataataacaatcac 40956886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 42746957 - 42746904
Alignment:
Q  11 attaaaataaaaatgattttgacataagataattagagattattttttagagatttt 67  Q
    |||||||||||| |||||||||||| |   | |||||||||||||||||||||||||    
T  42746957 attaaaataaaagtgattttgacatta---atttagagattattttttagagatttt 42746904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 10117967 - 10118024
Alignment:
Q  19 aaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaa 75  Q
    |||||||||||||||||   |||||| |||||||||||||||||||||| || |||||    
T  10117967 aaaaatgattttgacattcaataattcagagattattttttagagatttaatcaaaaa 10118024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 16435986 - 16436043
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaat 113  Q
    ||||||||||||||||||||| | |||||||| |||| || |||| | ||||||||||    
T  16435986 tttagagattttatgaaaaattaaaatctattatgcgattatttaccataataaaaat 16436043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 42816011 - 42815966
Alignment:
Q  175 ttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||| |||||| |  ||||||||||||||||||||    
T  42816011 ttacaaaattagttcgatcttttagatcatattttctctctcctct 42815966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 43495883 - 43495928
Alignment:
Q  175 ttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    |||||||||||||| ||||||| ||  |||||||||||||||||||    
T  43495883 ttacaaaattagtttaatcttttaaaacatattttctctctcctct 43495928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 2494121 - 2494077
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcct 218  Q
    |||||||||||| |||||| ||| || ||||||||||||||||||    
T  2494121 gttacaaaattaattcaatattttaaatcatattttctctctcct 2494077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 29100754 - 29100814
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    |||| ||||| |||||||||||| ||||  |||||||||||||||  ||||||||| ||||    
T  29100754 tttaaagattatatgaaaaatcagaatcatttttgcgtttgtttactgtaataaaactcac 29100814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 29993557 - 29993513
Alignment:
Q  71 aaaaatcataatctattttgcgtttgtttaacgtaataaaaatca 115  Q
    |||||||| ||| ||||||| ||||||||| ||||||||||||||    
T  29993557 aaaaatcagaatttattttgagtttgtttagcgtaataaaaatca 29993513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 205132 - 205236
Alignment:
Q  11 attaaaataaaaatgattttgacataagataattagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaa 110  Q
    |||||||| | | |||||||||||||| ||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||| |||||||||    
T  205132 attaaaatgatagtgattttgacataaaataattagagattatattttagagattttatgaaaaattagaatctattttgcgtttgtttaccgtaataaa 205231  T
Q  111 aatca 115  Q
    |||||    
T  205232 aatca 205236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 106233 - 106069
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcacnnnnnnnaaa-agataatttaatttgtttggatccagct 154  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||       ||| | ||||| |  ||||||||||| || ||    
T  106233 tttagagattttatgaaaaatcagaatctattttgcgtttgtttaccgtaataaaaatcactttttttaaacaaataatcttgtttgtttggatacaact 106134  T
Q  155 gtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
     |||||||  ||       ||||||||||||||||||||||| || ||||||||||||||||||||    
T  106133 atataaaaagga-ttttttgttacaaaattagttcaatcttttaaatcatattttctctctcctct 106069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 205294 - 205340
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||||||| ||   ||||||||||||||||||    
T  205294 gttacaaaattagttcaatcttttaaacaatattttctctctcctct 205340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 7e-33; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 113
Target Start/End: Complemental strand, 7205012 - 7204909
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||||||||| |||||||||| ||||||||    
T  7205012 attaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttacgtttgtttaccgtaataa 7204913  T
Q  110 aaat 113  Q
    ||||    
T  7204912 aaat 7204909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 166
Target Start/End: Complemental strand, 14094262 - 14094108
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||||| |||||||||| ||||||||| ||||||||||| ||||||||| ||||||||    
T  14094262 attaaaataaaagtgattttgacataaaataatttagagattattttt-agagattttaagaaaaatcagaatctattttgtgtttgtttatcgtaataa 14094164  T
Q  110 aaatcacnnnnnnnaaaagataatttaatttgtttggatccagctgtataaaagcga 166  Q
    |||||||       |||| |||||||| ||||||||||| || || |||||||||||    
T  14094163 aaatcacctttttaaaaa-ataatttagtttgtttggatacaactatataaaagcga 14094108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 220
Target Start/End: Complemental strand, 2258901 - 2258698
Alignment:
Q  18 taaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    ||||| |||||||||||||| |||||| ||||||||| ||||||||||||| ||||||||   ||||||||||||||||||||| ||||||||||||||     
T  2258901 taaaagtgattttgacataaaataatttagagattatattttagagattttgtgaaaaatttgaatctattttgcgtttgtttaccgtaataaaaatcat 2258802  T
Q  117 nnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattttctctct 215  Q
           ||| | ||||| || ||||||| ||| || || |||||||| ||       ||||||||||||||||||||||| || |||||||||||||||    
T  2258801 ttgttttaaacaaataatctagtttgttttgatacaactatataaaagaga-ttttttgttacaaaattagttcaatcttttaaatcatattttctctct 2258703  T
Q  216 cctct 220  Q
    |||||    
T  2258702 cctct 2258698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 21980793 - 21981003
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    ||||||||| || | |||||||||||| |||||| |||||||||  |||||||||||||||||||||||  |||||||||| ||||||||| ||||||||    
T  21980793 attaaaatataagttattttgacataaaataatttagagattatagtttagagattttatgaaaaatcaagatctattttgtgtttgtttaccgtaataa 21980892  T
Q  110 aaatcacnnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattt 208  Q
    |||||||       ||| | ||||| || ||||||||||| || || |||||||| ||       ||||||||||||||||||||||| ||   ||||||    
T  21980893 aaatcactttttttaaacaaataatgtagtttgtttggatacaactatataaaag-gaattttttgttacaaaattagttcaatcttttaaaaaatattt 21980991  T
Q  209 tctctctcctct 220  Q
    ||||||||||||    
T  21980992 tctctctcctct 21981003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 21091888 - 21091999
Alignment:
Q  1 ttttttacctattaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgttt 99  Q
    |||||||| ||||||||||||  |||||||| | ||| |||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  21091888 ttttttacatattaaaataaatgtgattttggcttaa-ataatttagagattattttatagagattttatgaaaaatcagaatctattttgcgtttgttt 21091986  T
Q  100 aacgtaataaaaa 112  Q
    | | |||||||||    
T  21091987 atcttaataaaaa 21091999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 26001452 - 26001350
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| |||||||    ||||||||||||||||||||| | ||| ||||||||||||||||| ||||||||    
T  26001452 attaaaataaaagtgattttgacataaaataatttagagatt----tttagagattttatgaaaaattagaatttattttgcgtttgtttatcgtaataa 26001357  T
Q  110 aaatcac 116  Q
    |||||||    
T  26001356 aaatcac 26001350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 216
Target Start/End: Original strand, 33438550 - 33438755
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatta-gagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| ||||||||||| || ||||||  |||||||| ||||| |||||||||||||||| | ||| ||||||||||||||||| | ||||||    
T  33438550 attaaaataaaagtgattttgacacaaaataattttgagattatattttaaagattttatgaaaaattagaatttattttgcgtttgtttaccataataa 33438649  T
Q  110 aaatcacnnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattt 208  Q
    |||||||       ||| | |||||||| |||||||| || || || |||||||| ||       |||| |||||||||||||||||| ||  |||||||    
T  33438650 aaatcactttttttaaacaaataatttagtttgtttgaatacaactatataaaagaga--tttttgttaaaaaattagttcaatcttttaaaccatattt 33438747  T
Q  209 tctctctc 216  Q
    ||||||||    
T  33438748 tctctctc 33438755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 3307517 - 3307444
Alignment:
Q  43 ttagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    ||||||||||  |||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  3307517 ttagagattacattttagagattttatgaaaaatcagaatctattttgtgtttgtttatcgtaataaaaatcac 3307444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 24007036 - 24006968
Alignment:
Q  47 agattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatca 115  Q
    ||||||||||||||||||||||| |||||||| ||||||||| || ||||||||  |||||||||||||    
T  24007036 agattattttttagagattttataaaaaatcagaatctatttagcatttgtttactgtaataaaaatca 24006968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 20609512 - 20609409
Alignment:
Q  5 ttacctattaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaa--tcataatctattttgcgtttgtttaa 101  Q
    |||| ||||||||||||||| ||||||||||   |||||| ||  ||||||||||| ||||||||| |||||  ||| |||||||||||||||||||||     
T  20609512 ttacatattaaaataaaaataattttgacattgaataatttagttattattttttaaagattttataaaaaaaatcacaatctattttgcgtttgtttac 20609413  T
Q  102 cgta 105  Q
    ||||    
T  20609412 cgta 20609409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 116
Target Start/End: Complemental strand, 20469484 - 20469424
Alignment:
Q  57 ttagagattttatgaaaaatcataat-ctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    |||||||||||||||||||||  ||| |||||||||||||||||| ||| |||||||||||    
T  20469484 ttagagattttatgaaaaatctgaattctattttgcgtttgtttaccgtgataaaaatcac 20469424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 7204841 - 7204795
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||||    
T  7204841 gttacaaaattagttcaatcttttaaatcatattttttctctcctct 7204795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 26209052 - 26209110
Alignment:
Q  55 ttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaat 113  Q
    |||||||||||||||||||||| | |||||||||||| |||||||| | | ||||||||    
T  26209052 ttttagagattttatgaaaaattaaaatctattttgcatttgtttaccatgataaaaat 26209110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 3307018 - 3306977
Alignment:
Q  175 ttacaaaattagttcaatctttaaattcatattttctctctc 216  Q
    |||||||| ||||||||||||| |||||||||||||||||||    
T  3307018 ttacaaaactagttcaatcttttaattcatattttctctctc 3306977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 20469516 - 20469476
Alignment:
Q  11 attaaaataaaaatgattttgacataagataattagagatt 51  Q
    |||||||||||| |||||||||||||| |||||||||||||    
T  20469516 attaaaataaaagtgattttgacataaaataattagagatt 20469476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 26277615 - 26277564
Alignment:
Q  47 agattattttttagagattttatgaaaaatcataatctattttgcgtttgtt 98  Q
    |||||||||||||||||||||||||||||  |||||| ||| || |||||||    
T  26277615 agattattttttagagattttatgaaaaaatataatcaattatgggtttgtt 26277564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 12203011 - 12203088
Alignment:
Q  19 aaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgttt 95  Q
    |||||||||||||||||   |||||| ||||||||||||||| ||| ||||| |||||  |||||| |||||| ||||    
T  12203011 aaaaatgattttgacattctataatttagagattattttttaaagactttattaaaaagtataatcaattttgtgttt 12203088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 54356154 - 54356365
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||| ||||| |||||||||||| | |||||| ||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||| | ||||||    
T  54356154 attaaagtaaaagtgattttgacattaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgtgtttgtttaccataataa 54356253  T
Q  110 aaatcac--nnnnnnnaaaagataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatatt 207  Q
    |||||||         || | |||||||| |||||||||||  | || |||||||| ||       ||||||||||||||||||||||| || |||||||    
T  54356254 aaatcacttttttttaaacaaataatttagtttgtttggatataactatataaaaggga-ttttttgttacaaaattagttcaatcttttaaatcatatt 54356352  T
Q  208 ttctctctcctct 220  Q
    |||||||||||||    
T  54356353 ttctctctcctct 54356365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 10332980 - 10333093
Alignment:
Q  5 ttacctattaaaataaaaat-gattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaac 102  Q
    |||| ||||||||||||| | ||||||||||||| |||||| ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||| |    
T  10332980 ttacatattaaaataaaagttgattttgacataaaataatttagagattatattttagagattttataaaaaatcagaatctattttgcgtttgtttagc 10333079  T
Q  103 gtaataaaaatcac 116  Q
    ||||||||||||||    
T  10333080 gtaataaaaatcac 10333093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 8707904 - 8708114
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    ||||||| |||| ||||||| |||||| |||||| ||||||||| ||||| ||||||| |||||||||| ||||||||||||||||||||| ||||||||    
T  8707904 attaaaaaaaaagtgattttcacataaaataatttagagattatattttatagattttgtgaaaaatcagaatctattttgcgtttgtttaccgtaataa 8708003  T
Q  110 aaatcacnnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattt 208  Q
    |||||||       ||| | ||||| |  ||||||| ||| || || ||||||||  |       ||||||||||||||||||||||| || ||||||||    
T  8708004 aaatcaccttttttaaacaaataatcttgtttgttttgatacaactatataaaag-aaattttttgttacaaaattagttcaatcttttaaatcatattt 8708102  T
Q  209 tctctctcctct 220  Q
    ||||||||||||    
T  8708103 tctctctcctct 8708114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 9059791 - 9060001
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    ||||||| |||| ||||||| |||||| |||||| ||||||||| ||||| ||||||| |||||||||| ||||||||||||||||||||| ||||||||    
T  9059791 attaaaaaaaaagtgattttcacataaaataatttagagattatattttatagattttgtgaaaaatcagaatctattttgcgtttgtttaccgtaataa 9059890  T
Q  110 aaatcacnnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattt 208  Q
    |||||||       ||| | ||||| |  ||||||| ||| || || ||||||||  |       ||||||||||||||||||||||| || ||||||||    
T  9059891 aaatcaccttttttaaacaaataatcttgtttgttttgatacaactatataaaag-aaattttttgttacaaaattagttcaatcttttaaatcatattt 9059989  T
Q  209 tctctctcctct 220  Q
    ||||||||||||    
T  9059990 tctctctcctct 9060001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 21388621 - 21388411
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||| ||| |||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||| | |||||||| | ||||||    
T  21388621 attaaaatcaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcataatctattttacatttgtttaccataataa 21388522  T
Q  110 aaatcacnnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattt 208  Q
     ||||||       ||| | ||||| || ||||||||||| || || |||||||| ||       |||| |||||||||||||||||| ||   ||||||    
T  21388521 taatcactttttttaaacaaataatctagtttgtttggatacaactatataaaaggga-ttttttgttataaaattagttcaatcttttaaacaatattt 21388423  T
Q  209 tctctctcctct 220  Q
    ||||||||||||    
T  21388422 tctctctcctct 21388411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 16106227 - 16106122
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||  ||||| |||||| ||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||| | ||||||    
T  16106227 attaaaataaaagtgatttttccataaaataatttagatattattttatagagattttatgaaaaatcagaatctattttgcgtttgtttaccctaataa 16106128  T
Q  110 aaatca 115  Q
    ||||||    
T  16106127 aaatca 16106122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 34795241 - 34795136
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| | |||||||| ||| |||||| ||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||  |||||||    
T  34795241 attaaaataaaagtaattttgacgtaaaataatttagagattatattttagagattttatgaaaaatcagaatctattttacgtttgtttacggtaataa 34795142  T
Q  110 aaatca 115  Q
    ||||||    
T  34795141 aaatca 34795136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 11632953 - 11633054
Alignment:
Q  15 aaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaat 113  Q
    |||||||| |||||||||||||| |||||| ||||||||| |||||   ||||| |||||||||| ||||||||||||||||||||| ||||||||||||    
T  11632953 aaataaaagtgattttgacataaaataatttagagattatattttaagaattttgtgaaaaatcaaaatctattttgcgtttgtttaccgtaataaaaat 11633052  T
Q  114 ca 115  Q
    ||    
T  11633053 ca 11633054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 40285242 - 40285138
Alignment:
Q  12 ttaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaa 110  Q
    ||||||||||| ||||||||| |||| |||||| ||||||||| || |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||    
T  40285242 ttaaaataaaagtgattttgatataaaataatttagagattatattctagagattttgtgaaaaatcagaatctgttttacgtttgtttaccgtaataaa 40285143  T
Q  111 aatca 115  Q
    |||||    
T  40285142 aatca 40285138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 26863228 - 26863122
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||| | |||||| ||||||||| ||||||||||||| || ||||| | |||||| ||||||||||||||  |||||||    
T  26863228 attaaaataaaagtgattttgacatcaaataatttagagattatattttagagattttgtgtaaaattagaatctactttgcgtttgtttactgtaataa 26863129  T
Q  110 aaatcac 116  Q
    |||||||    
T  26863128 aaatcac 26863122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 7433801 - 7433696
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| | |||||||||||| |||||| ||||||||| |  |||||||||| |||||||||| |||||||||| ||||||||||  |||||||    
T  7433801 attaaaataaaagtaattttgacataaaataatttagagattatatcgtagagattttgtgaaaaatcagaatctattttacgtttgtttactgtaataa 7433702  T
Q  110 aaatca 115  Q
    ||||||    
T  7433701 aaatca 7433696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 113
Target Start/End: Complemental strand, 24485796 - 24485692
Alignment:
Q  11 attaaaataaaaatgattttgacataagataattag-agattattttttagagattttatgaaaaa-tcataatctattttgcgtttgtttaacgtaata 108  Q
    ||||| |||||| |||||||||||||| ||||||   ||||||| ||||||||||||||||||||| ||| ||||||||||| ||||||||| |||||||    
T  24485796 attaatataaaagtgattttgacataaaataatttttagattatattttagagattttatgaaaaaatcagaatctattttgtgtttgtttaccgtaata 24485697  T
Q  109 aaaat 113  Q
    |||||    
T  24485696 aaaat 24485692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 212
Target Start/End: Complemental strand, 26168088 - 26167886
Alignment:
Q  12 ttaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaa 110  Q
    ||||||||||| |||||||||||||| |||||| ||||||||| ||||||||||||| |||||||||| |  || |||||||||||||||  |||| |||    
T  26168088 ttaaaataaaagtgattttgacataaaataatttagagattatattttagagattttgtgaaaaatcaga--ctcttttgcgtttgtttacagtaacaaa 26167991  T
Q  111 aatcacnnnnnnnaaa-agataatttaatttgtttggatccagctgtataaaagcga--nnnnnnngttacaaaattagttcaatctttaaattcatatt 207  Q
    ||||||       ||| | |||||||| ||||||||||| || || |||||||| ||         ||||||||||||||||||||||| || |||||||    
T  26167990 aatcactttttttaaataaataatttagtttgtttggatacaactatataaaagagatttttttttgttacaaaattagttcaatcttttaaatcatatt 26167891  T
Q  208 ttctc 212  Q
     ||||    
T  26167890 ctctc 26167886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 30917638 - 30917737
Alignment:
Q  17 ataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatca 115  Q
    |||||| |||||||| ||||| |||||| | |||||||||| ||||||||||||||||||| | |||||||||| |||||||||| | ||||||||||||    
T  30917638 ataaaagtgattttgtcataaaataatttatagattattttatagagattttatgaaaaattaaaatctattttccgtttgtttatcctaataaaaatca 30917737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 47567954 - 47567855
Alignment:
Q  17 ataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatca 115  Q
    |||||| ||| |||||||| | |||||| ||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||  |||||||| |||||    
T  47567954 ataaaagtgagtttgacatcaaataatttagaaattatattttagagattttatgaaaaatcagaatctattttgcgtttgtttgccgtaataataatca 47567855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 54981761 - 54981701
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcac 116  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  54981761 tttagagactttatgaaaaatcagaatctattttgcgtttgtttaccgtaataaaaatcac 54981701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 113
Target Start/End: Original strand, 12100948 - 12101051
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||||||||| |||||||||||||| |||||| | | ||||| ||||||  |||||||||||||||| ||| |||||| |||||||| | ||||||||    
T  12100948 attaaaataaaagtgattttgacataaaataatttaaaaattatattttagtaattttatgaaaaatcagaatttattttacgtttgttaatcgtaataa 12101047  T
Q  110 aaat 113  Q
    ||||    
T  12101048 aaat 12101051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 54981816 - 54981875
Alignment:
Q  52 attttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaa 111  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||    
T  54981816 attttttagagattttatgaaaaatcagaatctattttgcgtttgtttacagtaataaaa 54981875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 3942775 - 3942673
Alignment:
Q  12 ttaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaa 110  Q
    ||||||| ||| |||||||||| ||| |||||| ||||||||| |||||||||||| ||||||||||| ||||||||||| ||||||||| ||  |||||    
T  3942775 ttaaaatgaaagtgattttgacttaaaataatttagagattatattttagagattt-atgaaaaatcagaatctattttgtgtttgtttaccg--ataaa 3942679  T
Q  111 aatcac 116  Q
    ||||||    
T  3942678 aatcac 3942673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 23027660 - 23027750
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgttta 100  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| ||||||||||| | | |||||||| ||||||||||  |||||||||    
T  23027660 attaaaataaaagtgattttgacataaaataatttagagattatgttttagagattctttaaaaaatcagaatctattttatgtttgttta 23027750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 45585980 - 45586069
Alignment:
Q  12 ttaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgttta 100  Q
    ||||||||||| ||||||| |||||| |||||| |||||||| ||| ||||||||||||||||||| | ||| ||||||| |||||||||    
T  45585980 ttaaaataaaagtgatttttacataaaataatttagagattactttatagagattttatgaaaaattagaatttattttgtgtttgttta 45586069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 21459491 - 21459606
Alignment:
Q  5 ttacctattaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatga--aaaat-cataatctattttgcgtttgttta 100  Q
    |||| ||||||||||||| ||||||| |||| | |||||| ||||||||| |||||||||||||||||  |  || ||||||||||||||| ||||||||    
T  21459491 ttacatattaaaataaaagtgatttttacatcaaataatttagagattatattttagagattttatgattatgatgcataatctattttgcatttgttta 21459590  T
Q  101 acgtaataaaaatcac 116  Q
     ||| |||||||||||    
T  21459591 ccgtgataaaaatcac 21459606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 44869161 - 44869073
Alignment:
Q  13 taaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgttta 100  Q
    |||||||||| |||||||||||||| |||||| ||||||||| ||||||||||| | | |||||||| ||||||||||  |||||||||    
T  44869161 taaaataaaagtgattttgacataaaataatttagagattatgttttagagattctttaaaaaatcagaatctattttatgtttgttta 44869073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 114
Target Start/End: Complemental strand, 23027955 - 23027884
Alignment:
Q  43 ttagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatc 114  Q
    ||||||||||| ||||| ||||||| |||||||||| ||||||||||  ||||||||| |||||||||||||    
T  23027955 ttagagattatattttaaagattttgtgaaaaatcaaaatctattttatgtttgtttaccgtaataaaaatc 23027884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 54585915 - 54585828
Alignment:
Q  129 ataatttaatttgtttggatccagctgtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattttctctctc 216  Q
    |||||||| ||||||||||| ||||| |||||||||||       |||||||||||||||||||| ||| || |||||||||||||||    
T  54585915 ataatttagtttgtttggatacagctatataaaagcgatttttttgttacaaaattagttcaatccttatatccatattttctctctc 54585828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 27245953 - 27245896
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaat 113  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| |||| |||||||    
T  27245953 tttagagattttatgaaaaatcaaaatctattttgtgtttgtttaccgtattaaaaat 27245896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 113
Target Start/End: Original strand, 26760452 - 26760555
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    |||||| ||||| | |||||||  ||| |||||| ||||||||| |||||||||||||||  ||||| | ||||||||||||||||||||| |||  |||    
T  26760452 attaaattaaaagttattttgatgtaaaataatttagagattatattttagagattttatataaaattagaatctattttgcgtttgtttaccgtggtaa 26760551  T
Q  110 aaat 113  Q
    ||||    
T  26760552 aaat 26760555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 220
Target Start/End: Complemental strand, 10297350 - 10297198
Alignment:
Q  68 atgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcacnnnnnnnaaaagataatttaatttgtttggatccagctgtataaaagcgan 167  Q
    ||||||||||| |||||||||||||||||| || | ||||||||||||        || | |||||||| ||||||||||| || || |||| ||  |      
T  10297350 atgaaaaatcagaatctattttgcgtttgtataccataataaaaatcatttttttaaacaaataatttagtttgtttggatacaactatatataaaaggg 10297251  T
Q  168 nnnnnngttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
          ||||||||||||||||||||||| || | ||||||||||||||||||    
T  10297250 atttctgttacaaaattagttcaatcttttaaataatattttctctctcctct 10297198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 23027627 - 23027581
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||    
T  23027627 gttacaaaattagttcaatcttttaaatcatattttctctctcctct 23027581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 220
Target Start/End: Complemental strand, 10332825 - 10332676
Alignment:
Q  68 atgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcacnnnnnnnaaaagataatttaatttgtttggatccagctgtataaaagcgan 167  Q
    ||||||||||| ||||||||||| ||||||||| | ||||||||||||        | || |||||| | ||||||||||| || || |||||||| ||     
T  10332825 atgaaaaatcagaatctattttgtgtttgtttaccataataaaaatcattttttaaacaa-ataattcagtttgtttggatacaactatataaaagggat 10332727  T
Q  168 nnnnnngttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
          ||||||||||||||||||| |||||| | ||||||||||||||||||    
T  10332726 tttt--gttacaaaattagttcaatgtttaaaataatattttctctctcctct 10332676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 44077951 - 44077887
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaa 74  Q
    ||||||||||||||||||| ||||||| ||| || ||||||||||| ||||||||||| ||||||    
T  44077951 attaaaataaaaatgatttagacataaaatattttagagattatttattagagattttgtgaaaa 44077887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 100
Target Start/End: Original strand, 40459609 - 40459648
Alignment:
Q  61 agattttatgaaaaatcataatctattttgcgtttgttta 100  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  40459609 agattttatgaaaaatcaaaatctattttgcgtttgttta 40459648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 3901657 - 3901711
Alignment:
Q  57 ttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaa 111  Q
    ||||||||||||| |||||||| ||| |||||||| |||||||| ||||||||||    
T  3901657 ttagagattttataaaaaatcaaaatttattttgcatttgtttatcgtaataaaa 3901711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 46514893 - 46514984
Alignment:
Q  11 attaaaataaaaatgattttgacataagataattagagattattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaa 110  Q
    ||||||||||||||||||||||||||| ||||| |          |||| ||||||||| |||||||| ||| |||| |||||||||||| |||||||||    
T  46514893 attaaaataaaaatgattttgacataaaataataa----------tttaaagattttataaaaaatcagaatttattctgcgtttgtttaccgtaataaa 46514982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 7335646 - 7335687
Alignment:
Q  179 aaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  7335646 aaaattagttcaatcttttaaatcatattttctctctcctct 7335687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 14900532 - 14900475
Alignment:
Q  19 aaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaa 75  Q
    |||||||||||||||||   |||||| ||||||||||||||||||| |||||||||||    
T  14900532 aaaaatgattttgacattctataatttagagattattttttagagactttatgaaaaa 14900475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 25250494 - 25250441
Alignment:
Q  24 tgattttgacataagataatt-agagattattttttagagattttatgaaaaat 76  Q
    ||||||||| |||| |||||| ||||||||||||||||||||| ||||||||||    
T  25250494 tgattttgatataaaataatttagagattattttttagagattatatgaaaaat 25250441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 214
Target Start/End: Original strand, 11633115 - 11633154
Alignment:
Q  175 ttacaaaattagttcaatctttaaattcatattttctctc 214  Q
    |||||||||||||||||||||| || ||||||||||||||    
T  11633115 ttacaaaattagttcaatcttttaaatcatattttctctc 11633154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 27943168 - 27943057
Alignment:
Q  2 tttttacctattaaaataaaaatgattttgacataagataatt-agagattattttt-tagagattttatgaaaaatcataatctattttgcgtttgttt 99  Q
    |||||||  |||||||||||||| ||||||||||   |||||| | | ||||||||| |||||||||||| |  ||||| ||||||||||| |||| | |    
T  27943168 tttttacaaattaaaataaaaataattttgacattcaataatttataaattatttttgtagagattttataattaatcaaaatctattttgtgtttttgt 27943069  T
Q  100 aacgtaataaaa 111  Q
    | ||||||||||    
T  27943068 atcgtaataaaa 27943057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 10297463 - 10297509
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||| ||||||  ||||||||||||| |||||    
T  10297463 gttacaaaattagttcaatttttaaaaccatattttctctcacctct 10297509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 10317082 - 10317036
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||| ||||||| || | ||||||||||||||||||    
T  10317082 gttacaaaattagtttaatcttttaaataatattttctctctcctct 10317036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 10317281 - 10317327
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||| ||||||  ||||||||||||| |||||    
T  10317281 gttacaaaattagttcaatttttaaaaccatattttctctcacctct 10317327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 10333151 - 10333197
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||||||| ||   ||||||||||||||||||    
T  10333151 gttacaaaattagttcaatcttttaaacaatattttctctctcctct 10333197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 24842519 - 24842473
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||| ||| || |||||||||||| |||||||    
T  24842519 gttacaaaattagttcaatattttaaatcatattttctccctcctct 24842473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 33832745 - 33832795
Alignment:
Q  65 tttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatca 115  Q
    |||||| ||||||| ||||||||||||||||||||| | |||| |||||||    
T  33832745 tttatggaaaatcaaaatctattttgcgtttgtttaccataattaaaatca 33832795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 44077837 - 44077791
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||||||| || | ||||||||||||| ||||    
T  44077837 gttacaaaattagttcaatcttttaaattatattttctctcttctct 44077791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 54981937 - 54981983
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||||||||| ||   ||||||||||||||||||    
T  54981937 gttacaaaattagttcaatcttttaaaatatattttctctctcctct 54981983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 100
Target Start/End: Complemental strand, 30498611 - 30498579
Alignment:
Q  68 atgaaaaatcataatctattttgcgtttgttta 100  Q
    ||||||||||| |||||||||||||||||||||    
T  30498611 atgaaaaatcagaatctattttgcgtttgttta 30498579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 40285080 - 40285036
Alignment:
Q  174 gttacaaaattagttcaatctttaaattcatattttctctctcct 218  Q
    |||||||||||| |||||| ||| || ||||||||||||||||||    
T  40285080 gttacaaaattaattcaatattttaaatcatattttctctctcct 40285036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 46515077 - 46515121
Alignment:
Q  176 tacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    ||||||||||||||||| ||| ||  |||||||||||||||||||    
T  46515077 tacaaaattagttcaatattttaaaccatattttctctctcctct 46515121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 53877695 - 53877735
Alignment:
Q  178 caaaattagttcaatctttaaattcatattttctctctcct 218  Q
    |||||| |||||||||||| || ||||||||||||||||||    
T  53877695 caaaatcagttcaatcttttaaatcatattttctctctcct 53877735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 2110 - 2046
Alignment:
Q  50 ttattttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatc 114  Q
    |||| |||||||||||||||||||||||| |||||||||| |||||||||| | |||||||||||    
T  2110 ttatattttagagattttatgaaaaatcagaatctattttacgtttgtttaccttaataaaaatc 2046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 21855 - 21797
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatc 114  Q
    |||||||||||| |||||||||| |||||||||||| |||||||| |||||||||||||    
T  21855 tttagagattttttgaaaaatcagaatctattttgcatttgtttaccgtaataaaaatc 21797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 21920 - 22082
Alignment:
Q  56 tttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataaaaatcacnnnnnnnaaa-agataatttaatttgtttggatccagct 154  Q
    |||||||||| |||||||||||| | | ||||||| ||||||||| | |||||||||||||       ||| | |||||||| |||||||||||  | ||    
T  21920 tttagagattgtatgaaaaatcaaattatattttgtgtttgtttatcataataaaaatcacttttttaaaacaaataatttagtttgtttggat--aact 22017  T
Q  155 gtataaaagcgannnnnnngttacaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
     |||||||| ||       ||||||||||||||||||||||| |||  ||||||||||||||||||    
T  22018 atataaaagggatttttt-gttacaaaattagttcaatcttttaatctatattttctctctcctct 22082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 71575 - 71485
Alignment:
Q  11 attaaaataaaaatgattttgacataagataatt-agagattattttttagagattttatgaaaaatcataatctattttgcgtttgttta 100  Q
    |||||||||||| |||||||||||||| |||||| ||||||||| ||||||||||| | |  ||||||| ||||||||||  |||||||||    
T  71575 attaaaataaaagtgattttgacataaaataatttagagattatgttttagagattctttacaaaatcagaatctattttatgtttgttta 71485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 150231 - 150188
Alignment:
Q  177 acaaaattagttcaatctttaaattcatattttctctctcctct 220  Q
    |||||||||||||||||||| ||  |||||||||||||||||||    
T  150231 acaaaattagttcaatcttttaaaccatattttctctctcctct 150188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 7284 - 7339
Alignment:
Q  53 ttttttagagattttatgaaaaatcataatctattttgcgtttgtttaacgtaataa 109  Q
    ||||||||||||||||| ||||| || ||||||||||| | ||||||| ||||||||    
T  7284 ttttttagagattttataaaaaaacagaatctattttgtg-ttgtttatcgtaataa 7339  T

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