View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7441_high_12 (Length: 227)
Name: NF7441_high_12
Description: NF7441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7441_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 11 - 211
Target Start/End: Original strand, 32815559 - 32815759
Alignment:
| Q |
11 |
agcagagagaagaataaagaaacgtaaaaaagagttagttaataataataccaatctctaagtcatgccatggatgagcagcagcatctttcttatcagc |
110 |
Q |
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| T |
32815559 |
agcagaaagaagaataaagaaacgtaaaaaagagttagttaataataataccaatctctaagtcatgccatggatgagcagcagcatctttcttatcagc |
32815658 |
T |
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| Q |
111 |
catggaagaaagtattctttcattcaacgcaacaactggaggcaactcaattttagcagtagaagaagaatgagttgcnnnnnnngattcttgttcattg |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
32815659 |
catggaagaaagtattctttcattcaacgcaacaactggaggcaactcaattttagcagtagaagaagaatgagttgctttttttgattcttgttcattg |
32815758 |
T |
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| Q |
211 |
t |
211 |
Q |
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| T |
32815759 |
t |
32815759 |
T |
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