View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7441_low_9 (Length: 246)
Name: NF7441_low_9
Description: NF7441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7441_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 31097661 - 31097897
Alignment:
| Q |
1 |
ccacttgccttgctgtctccatgatgtggatttactttgtaaaggcatcaactggagaaagcttaacaacgtaacattctcattatcgctgctatagcca |
100 |
Q |
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| T |
31097661 |
ccacttgccttgctgtctccatgatgtggatttactttgtaaaggcatcaactggagaaagcttaacaacgtaacattctcattatcgctgctatagcca |
31097760 |
T |
|
| Q |
101 |
ccactacctctaccccaaccaatccgtctcgcattctcaatgcttccattacctttaaactatcttgtagcaattactgtgcttggaaacaccaatcacc |
200 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31097761 |
ccactacctctaccccgaccaatccgtctcgcattctcaatgcttccattacctttaaactatcttgtagcaattactgtgcttggaaacaccaatcacc |
31097860 |
T |
|
| Q |
201 |
tacttttttctctgcgatccaaataatgggccatatt |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
31097861 |
tacttttttctctgcgatccaaataatgggccatatt |
31097897 |
T |
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