View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7446_low_1 (Length: 534)
Name: NF7446_low_1
Description: NF7446
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7446_low_1 |
 | |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 300; Significance: 1e-168; HSPs: 42)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 30 - 523
Target Start/End: Original strand, 10034790 - 10035278
Alignment:
| Q |
30 |
attggaaagggtgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagt |
129 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || || ||||||||||| |
|
|
| T |
10034790 |
attgaaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtatctatatatcagggatttcgatgaaatgaagt |
10034889 |
T |
|
| Q |
130 |
cctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttc |
229 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10034890 |
cctttgatggaaatgggcttcgacacctctcctctctccaaactctctgtttttggaattgtcatcaacttgagacattgccagaaaactgcctcccttc |
10034989 |
T |
|
| Q |
230 |
ctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctcttaagcaactagtcatttttagatgt |
329 |
Q |
| |
|
||||||||||| |||| ||||| ||||||||||| |||||||||||||||||||||||| |||||||||||| | |||| ||||| | || |
|
|
| T |
10034990 |
ctcgctgaaatcacttagattgtgggattgtaaaaagcttgagtcattaccagaagacagcctcactgactctcttagggaactctgcatttggaattgc |
10035089 |
T |
|
| Q |
330 |
ccattgttagtagaaaggtataaaaggaaggaacagtggtccaaaattgctcacatccctgtcatatatataaatgacgaagtcacaatatcatgagaac |
429 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| | ||||||||||||| || || || |
|
|
| T |
10035090 |
ccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctttcatagatataaatcatgaagtcacaatatgat-ag-ac |
10035187 |
T |
|
| Q |
430 |
aagttgtgttccagtttcaggtatgttccacagttcctaccagaaaactgccaataatcaatcatctgtacgacacacctcttaatattttcat |
523 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10035188 |
aagttgtgttcccatttcaggtatgttccacagttcctaccagaaa---gccaataatcaatcatctgtacgacacacctcttaatattttcat |
10035278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 30 - 523
Target Start/End: Original strand, 9980253 - 9980741
Alignment:
| Q |
30 |
attggaaagggtgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagt |
129 |
Q |
| |
|
|||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||| |||| | |||||||||||||||||| |
|
|
| T |
9980253 |
attgtaaagggtgatgatatatttaacaccttgatgaaggagtcattgctacccatctcccttgtgcatctacgtatctgtgatctctctgaaatgaagt |
9980352 |
T |
|
| Q |
130 |
cctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttc |
229 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| |||||||||| | |||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
9980353 |
cctttgatggaaatgggctgcgacacctctcctctctccaaagtctctgttttttgttttgtcaacaacttgagacattgccagaaaactgcctcccttc |
9980452 |
T |
|
| Q |
230 |
ctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctcttaagcaactagtcatttttagatgt |
329 |
Q |
| |
|
||||||||||| |||| |||| | | ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||| | | || |
|
|
| T |
9980453 |
ctcgctgaaatcacttgaattttatgattgtaaaaagctagagtcattaccagaagacagcctccctgaatctcttaaggaactgtacatcgatggttgc |
9980552 |
T |
|
| Q |
330 |
ccattgttagtagaaaggtataaaaggaaggaacagtggtccaaaattgctcacatccctgtcatatatataaatgacgaagtcacaatatcatgagaac |
429 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||||||| || || || |
|
|
| T |
9980553 |
ccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctgtcatatcaataaattacaaagtcacaatatgat-ag-ac |
9980650 |
T |
|
| Q |
430 |
aagttgtgttccagtttcaggtatgttccacagttcctaccagaaaactgccaataatcaatcatctgtacgacacacctcttaatattttcat |
523 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9980651 |
aagttgtgttcccatttcaggtatgttccacagttcctaccagaaa---gccaataatcaatcatctgtacgacacacctcttaatattttcat |
9980741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 35 - 523
Target Start/End: Original strand, 10263493 - 10263976
Alignment:
| Q |
35 |
aaagggtgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagtccttt |
134 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||| | || | ||||||||||||||||||||||| |
|
|
| T |
10263493 |
aaagggtgatgatatatttaacaccttgatgaaggagtcattgctacccatctcccttttgtatctacgtgtctttgatctctctgaaatgaagtccttt |
10263592 |
T |
|
| Q |
135 |
gatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttcctcgc |
234 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10263593 |
gatggaaatgggcttcaacacctctcctctctccaatatctctgttttttcttttgtcatcaacttgagacattgccagaaaactgcctcccttcctcgc |
10263692 |
T |
|
| Q |
235 |
tgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctcttaagcaactagtcatttttagatgtccatt |
334 |
Q |
| |
|
|||||| ||||| |||| || ||||| ||||||||||||||||||||||||||||||||||| ||||||||| | ||| | || || ||||| |
|
|
| T |
10263693 |
tgaaatcacttctattgcttggatgtgaaaagctagagtcattaccagaagacagcctcccttcctctcttaaactactcgctatcgagttttgcccatt |
10263792 |
T |
|
| Q |
335 |
gttagtagaaaggtataaaaggaaggaacagtggtccaaaattgctcacatccctgtcatatatataaatgacgaagtcacaatatcatgagaacaagtt |
434 |
Q |
| |
|
||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||||| |||||||| ||||||||||||| || || ||||||| |
|
|
| T |
10263793 |
gttagaagaaaggtataaaaggaaggaacattagtccaaaattgctcacatccctttcataagaataaatgatgaagtcacaatatgat-ag-acaagtt |
10263890 |
T |
|
| Q |
435 |
gtgttccagtttcaggtatgttccacagttcctaccagaaaactgccaataatcaatcatctgtacgacacacctcttaatattttcat |
523 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10263891 |
gtgttcccatttcaggtatgttccacagttcctaccagaaa---gccaataatcaatcatctgtacgacacacctcttaatattttcat |
10263976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 35 - 456
Target Start/End: Complemental strand, 10431318 - 10430898
Alignment:
| Q |
35 |
aaagggtgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagtccttt |
134 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
10431318 |
aaagggtgatgatatatttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcactgatctctctgaaatgaagtccttt |
10431219 |
T |
|
| Q |
135 |
gatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttcctcgc |
234 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| |||||||||| || |||| || ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10431218 |
gatggaaatgggctgcgacacctctcctctctccaaactctctgtttttggttttgtgatcaacttgagacattgccagaaaactgcctcccttcctcgc |
10431119 |
T |
|
| Q |
235 |
tgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctcttaagcaactagtcatttttagatgtccatt |
334 |
Q |
| |
|
|||||| |||| | |||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
10431118 |
tgaaatcacttgatttgtggaaatgtgaaaagcttgagtcattaccagaagacagcctccctgactctcttaagcaactgagaattagggaatgtccatt |
10431019 |
T |
|
| Q |
335 |
gttagtagaaaggtataaaaggaaggaacagtggtccaaaattgctcacatccctgtcatatatataaatgacgaagtcacaatatcatgagaacaagtt |
434 |
Q |
| |
|
||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||| || || ||||||| |
|
|
| T |
10431018 |
gttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctgtcatagatataaatgatgaagtcacaatatgat-ag-acaagtt |
10430921 |
T |
|
| Q |
435 |
gtgttccag-tttcaggtatgtt |
456 |
Q |
| |
|
||||||||| ||||||||||||| |
|
|
| T |
10430920 |
gtgttccagttttcaggtatgtt |
10430898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 36 - 499
Target Start/End: Original strand, 9841651 - 9842109
Alignment:
| Q |
36 |
aagggtgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagtcctttg |
135 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||| |
|
|
| T |
9841651 |
aagggtgatgatatatttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtctctaaatatcagggatctctctgaaatgaagtcctttg |
9841750 |
T |
|
| Q |
136 |
atggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttcctcgct |
235 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||| |||| | ||||| | |||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
9841751 |
atggaaatgggcttcgacacctctcctctctccaatatctcgatttttcgttttgtccacagcttgagtcattgccagaaaactgcctcccttcctcgct |
9841850 |
T |
|
| Q |
236 |
gaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctcttaagcaactagtcatttttagatgtccattg |
335 |
Q |
| |
|
||||| |||| |||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||| ||| || ||||| ||||||||||| |
|
|
| T |
9841851 |
gaaatcacttatattgtttcaatgtgaaaagcttgagtcattaccagaagacagcctccctgactctcttgagcgtctgaacatttggggatgtccattg |
9841950 |
T |
|
| Q |
336 |
ttagtagaaaggtataaaaggaaggaacagtggtccaaaattgctcacatccctgtcatatatataaatgacgaagtcacaatatcatgagaacaagttg |
435 |
Q |
| |
|
|||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| || |||||| ||||| || || |||||||| |
|
|
| T |
9841951 |
ttagaagaaaggtataaaaggaaggaacattgctccaaaattgctcacatccctgtcatatggataaaccaccaagtcagaatatgat-ag-acaagttg |
9842048 |
T |
|
| Q |
436 |
tgttccagtttcaggtatgttccacagttcctaccagaaaactgccaataatcaatcatctgta |
499 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
9842049 |
tgttcccgtttcaggtatgttccacagttcctaccagaaa---gccaataatcaatcctctgta |
9842109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 30 - 523
Target Start/End: Original strand, 10129709 - 10130190
Alignment:
| Q |
30 |
attggaaagggtgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagt |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || || ||||||||||| |
|
|
| T |
10129709 |
attggaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtatctatatatcagggatttcgatgaaatgaagt |
10129808 |
T |
|
| Q |
130 |
cctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttc |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10129809 |
cctttgatggaaatgggcttcgacacctcttctctctccaacatctcttcttttggaattgtcatcaacttgagacattgccagaaaactgcctcccttc |
10129908 |
T |
|
| Q |
230 |
ctcgctgaaattacttcaattgtttcga-tgtaaaaagctagagtcattaccagaagacagcctccctgactctcttaagcaactagtcatttttagatg |
328 |
Q |
| |
|
||||||||||| |||| | || || || ||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||| |||| |
|
|
| T |
10129909 |
ctcgctgaaatcacttgactt-ttgggattgtgaaaagctagagtcattaccagaagacagcctccctgattctcttatgcaactgtgcattcaaggatg |
10130007 |
T |
|
| Q |
329 |
tccattgttagtagaaaggtataaaaggaaggaacagtggtccaaaattgctcacatccctgtcatatatataaatgacgaagtcacaatatcatgagaa |
428 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||| ||| | |||| | ||| |||||||| || || | |
|
|
| T |
10130008 |
tccattgttagaagaaaggtataaaaggaaggaacattgctccaaaattgctcacatccctttcaaaaatat------caaaggcacaatatgat-ag-a |
10130099 |
T |
|
| Q |
429 |
caagttgtgttccagtttcaggtatgttccacagttcctaccagaaaactgccaataatcaatcatctgtacgacacacctcttaatattttcat |
523 |
Q |
| |
|
||||||||||||| ||||||||||| ||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
10130100 |
caagttgtgttcccatttcaggtatgctcc-tagttcctaccagaaa---gccaataatcaatcctctgtacgacacacctcttaatattttcat |
10130190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 30 - 499
Target Start/End: Original strand, 10520272 - 10520736
Alignment:
| Q |
30 |
attggaaagggtgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagt |
129 |
Q |
| |
|
|||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||| ||||| |||||||||||||||||| |
|
|
| T |
10520272 |
attgtaaagggtgatgatatatttaacaccttgatgaaggagtcattgctacccatctcccttgtgactctaactatcagggatctctctgaaatgaagt |
10520371 |
T |
|
| Q |
130 |
cctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttc |
229 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||||||||||| |||| ||||| || ||||| | |||||||||||||||||||||||||||||||||| |
|
|
| T |
10520372 |
cctttgatggaaaagggcttcgtcacctctcctctctccaacgtctccgtttttgggattgtgaacaacttgagacattgccagaaaactgcctcccttc |
10520471 |
T |
|
| Q |
230 |
ctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctcttaagcaactagtcatttttagatgt |
329 |
Q |
| |
|
|||||||||||||||| | |||| |||| ||||||| | |||||||||||||||||||||||||||||||| ||| ||| |||||| |||| |
|
|
| T |
10520472 |
ctcgctgaaattacttgatttgtggaaatgtgaaaagcttaaatcattaccagaagacagcctccctgactctctgaagagactgctcatttgggaatgt |
10520571 |
T |
|
| Q |
330 |
ccattgttagtagaaaggtataaaaggaaggaacagtggtccaaaattgctcacatccctgtcatatatataaatgacgaagtcacaatatcatgagaac |
429 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| || |||||||||||| || || || |
|
|
| T |
10520572 |
ccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatcccagtcatatcaataaattaccaagtcacaatatgat-ag-ac |
10520669 |
T |
|
| Q |
430 |
aagttgtgttccagtttcaggtatgttccacagttcctaccagaaaactgccaataatcaatcatctgta |
499 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
10520670 |
aagttgtgttcccatttcaggtatgttccacagttcctaccagaaa---gccaataatcaatcctctgta |
10520736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 30 - 456
Target Start/End: Complemental strand, 10361083 - 10360658
Alignment:
| Q |
30 |
attggaaagggtgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagt |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| | ||| || |||||||||||||||||| |
|
|
| T |
10361083 |
attggaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccgtctcccttgtgtctctggaaatccatcatctctctgaaatgaagt |
10360984 |
T |
|
| Q |
130 |
cctttgatggaaatgggcttcgacacctctcctctctccaacatctc-tgttttaggaattgtcataaacttgagacattgccagaaaactgcctccctt |
228 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||| |||| | |||||| |||| ||||||||||||||||||| |
|
|
| T |
10360983 |
cctttgatggaaatgggcttcgacacctctcctctctccaacatctcgtattttttgaa-tgtcgacagcttgagtcattaccagaaaactgcctccctt |
10360885 |
T |
|
| Q |
229 |
cctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctcttaagcaactagtcatttttagatg |
328 |
Q |
| |
|
|||||||||||| |||| ||| | | | ||| ||||||| | |||||||||||||||||||||||||||||||||||| |||| | ||| | | || |
|
|
| T |
10360884 |
cctcgctgaaatcacttacattttatggttgtgaaaagcttaaatcattaccagaagacagcctccctgactctcttaaggaactggacatctatgattg |
10360785 |
T |
|
| Q |
329 |
tccattgttagtagaaaggtataaaaggaaggaacagtggtccaaaattgctcacatccctgtcatatatataaatgacgaagtcacaatatcatgagaa |
428 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| || |||||||||||||||||||| |||||| | ||||| ||| |||||||||||| || || | |
|
|
| T |
10360784 |
cccattgttagaagaaaggtataaaaggaaggaacattgctccaaaattgctcacatccccgtcataaaaataaacgaccaagtcacaatatgat-ag-a |
10360687 |
T |
|
| Q |
429 |
caagttgtgttccag-tttcaggtatgtt |
456 |
Q |
| |
|
||||||||||||| | ||||||||||||| |
|
|
| T |
10360686 |
caagttgtgttcccgttttcaggtatgtt |
10360658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 30 - 441
Target Start/End: Original strand, 11772021 - 11772429
Alignment:
| Q |
30 |
attggaaagggtgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagt |
129 |
Q |
| |
|
|||||||| | |||| ||||||| | |||||||||||| |||| |||||| || |||||||||||| | || | ||||| | |||||| ||||||||||| |
|
|
| T |
11772021 |
attggaaatgatgataatatagtcaccaccttgatgaaagagttgttgctgcctatctcccttgtggacctgtctatcattgatctctatgaaatgaagt |
11772120 |
T |
|
| Q |
130 |
cctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttc |
229 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||| | || ||| ||||||||||||||||||||||||| |
|
|
| T |
11772121 |
cttttgatggaaatgggcttcgacacctctcctctctccaatatctctatttttggaattgtcaacagctcgagtcattgccagaaaactgcctcccttc |
11772220 |
T |
|
| Q |
230 |
ctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctcttaagcaactagtcatttttagatgt |
329 |
Q |
| |
|
|||| |||||| |||| ||| ||| | |||| ||||||||||| |||||||||||||| ||||||||||||||||| ||||| |||| |
|
|
| T |
11772221 |
ctcgttgaaatcactttcatttcaaatgtgtgaggagcttgagtcattaccggaagacagcctccccgactctcttaagcaactgaccatttggggatgc |
11772320 |
T |
|
| Q |
330 |
ccattgttagtagaaaggtataaaaggaaggaacagtggtccaaaattgctcacatccctgtcatatatataaatgacgaagtcacaatatcatgagaac |
429 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||| ||||||||||| |||||||||||||||||| |||||||||| |||||||||| |||||||| |
|
|
| T |
11772321 |
ccattgttagaagaaaggtataaaaggaaagaacattggtccaaaatcgctcacatccctgtcatagatataaatgaaaaagtcacaat---atgagaac |
11772417 |
T |
|
| Q |
430 |
aagttgtgttcc |
441 |
Q |
| |
|
||| |||||||| |
|
|
| T |
11772418 |
aagctgtgttcc |
11772429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 30 - 441
Target Start/End: Complemental strand, 11779264 - 11778856
Alignment:
| Q |
30 |
attggaaagggtgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagt |
129 |
Q |
| |
|
|||||||| | |||| ||||||| | ||||||||||||||| | ||||||||| |||||||||||| | || | ||||| | |||||| ||||||||||| |
|
|
| T |
11779264 |
attggaaatgatgataatatagtcaccaccttgatgaaggatttgttgctacctatctcccttgtggacctgtctatcattgatctctatgaaatgaagt |
11779165 |
T |
|
| Q |
130 |
cctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttc |
229 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||| || |||||| |||| |||||||||| | || ||| ||||||||||||||||||||||||| |
|
|
| T |
11779164 |
ccttcgatggaaatgggcttcgacacctctcctctctcgaatatctctatttttggaattgtcaacagctcgagtcattgccagaaaactgcctcccttc |
11779065 |
T |
|
| Q |
230 |
ctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctcttaagcaactagtcatttttagatgt |
329 |
Q |
| |
|
|||| |||||| |||| ||| ||| | |||| ||||||||||| |||||||||||||| ||||||||||||||||| ||||| |||| |
|
|
| T |
11779064 |
ctcgttgaaatcactttcatttcaaatgtgtgaggagcttgagtcattaccggaagacagcctccccgactctcttaagcaactgaccatttggggatgc |
11778965 |
T |
|
| Q |
330 |
ccattgttagtagaaaggtataaaaggaaggaacagtggtccaaaattgctcacatccctgtcatatatataaatgacgaagtcacaatatcatgagaac |
429 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||| ||||||||||| |||||||||||||||||| | |||||||| |||||||||| |||||||| |
|
|
| T |
11778964 |
ccattgttagaagaaaggtataaaaggaaagaacattggtccaaaatcgctcacatccctgtcatagaaataaatgaaaaagtcacaat---atgagaac |
11778868 |
T |
|
| Q |
430 |
aagttgtgttcc |
441 |
Q |
| |
|
||| |||||||| |
|
|
| T |
11778867 |
aagctgtgttcc |
11778856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 30 - 296
Target Start/End: Original strand, 10583300 - 10583566
Alignment:
| Q |
30 |
attggaaagggtgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagt |
129 |
Q |
| |
|
|||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
10583300 |
attggaaaggatgatgatatatttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatctggaatctctctgaaatgaagt |
10583399 |
T |
|
| Q |
130 |
cctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttc |
229 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| ||||||||||| | ||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10583400 |
cctttgatggaaatgggctgcgacacctctcctctctccaatatctctgttttttcatttgtcatcaacttgagacattgccagaaaactgcctcccttc |
10583499 |
T |
|
| Q |
230 |
ctcgctgaaattacttcaattgtttcga-tgtaaaaagctagagtcattaccagaagacagcctccct |
296 |
Q |
| |
|
||| ||||||| |||| ||| | | || ||| ||||||| | ||||||||||||||||||||||||| |
|
|
| T |
10583500 |
ctcactgaaatcactttcatt-tatggattgtgaaaagcttgggtcattaccagaagacagcctccct |
10583566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 198 - 499
Target Start/End: Original strand, 9852832 - 9853128
Alignment:
| Q |
198 |
cttgagacattgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctg |
297 |
Q |
| |
|
|||||| |||| ||||||||||||||||| || |||||||||| |||| |||||| |||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
9852832 |
cttgagtcattaccagaaaactgcctcccatcatcgctgaaatcacttgaattgtggaaatgtgaaaagctagagtcattaccagaagacagcctccctg |
9852931 |
T |
|
| Q |
298 |
actctcttaagcaactagtcatttttagatgtccattgttagtagaaaggtataaaaggaaggaacagtggtccaaaattgctcacatccctgtcatata |
397 |
Q |
| |
|
|||| || ||| ||| | ||||| | ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |
|
|
| T |
9852932 |
actcactgaagagactggacatttatggatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctgtcataga |
9853031 |
T |
|
| Q |
398 |
tataaatgacgaagtcacaatatcatgagaacaagttgtgttccagtttcaggtatgttccacagttcctaccagaaaactgccaataatcaatcatctg |
497 |
Q |
| |
|
||||||||| | || ||||||| || || |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
9853032 |
aataaatgaccaggttacaatatgat-ag-acaagttgtgttcccatttcaggtatgttccacagttcctaccagaaa---gccaataatcaatcctctg |
9853126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 9852511 - 9852746
Alignment:
| Q |
15 |
ctttcatcattgtggattggaaagggtgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatc |
114 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||| |||||| || |
|
|
| T |
9852511 |
ctttcatcattgtggattgtaaagggtgatgatatatttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctaaatatcatggttc |
9852610 |
T |
|
| Q |
115 |
tctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccaga |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||| | |||||| | |||| | |||||||||| |
|
|
| T |
9852611 |
tctctgaaatgaagtcctttgatggaaatgggcttcgacacctcttctctctccaatatctctattttgcgggttgtcaacagcttgggtcattgccaga |
9852710 |
T |
|
| Q |
215 |
aaactgcctcccttcctcgctgaaattacttcaatt |
250 |
Q |
| |
|
||||||| |||||||||| ||||||| |||| |||| |
|
|
| T |
9852711 |
aaactgcttcccttcctcactgaaatcacttaaatt |
9852746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 34 - 238
Target Start/End: Complemental strand, 10373120 - 10372916
Alignment:
| Q |
34 |
gaaagggtgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagtcctt |
133 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
10373120 |
gaaaggatgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgcatctacgtatcaattatctctctgaaatgaagtcctt |
10373021 |
T |
|
| Q |
134 |
tgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttcctcg |
233 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || |||||| |||| |||||| | || |||||| |||| |||||| || ||||||||||||| |
|
|
| T |
10373020 |
tgatggaaatgggcttcgacacctctcctctctcaaaaatctctatttttttaattgtgaaaagcttgagtcattaccagaagacagcctcccttcctct |
10372921 |
T |
|
| Q |
234 |
ctgaa |
238 |
Q |
| |
|
||||| |
|
|
| T |
10372920 |
ctgaa |
10372916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 205 - 452
Target Start/End: Original strand, 10666497 - 10666742
Alignment:
| Q |
205 |
cattgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctct |
304 |
Q |
| |
|
|||| |||||| || ||||||||||||||||||||| |||| |||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
10666497 |
cattaccagaagacagcctcccttcctcgctgaaatcacttgaattgtttgaatgtgaaaagcttgagtcattaccagaagacagcctccctgactctct |
10666596 |
T |
|
| Q |
305 |
taagcaactagtcatttttagatgtccattgttagtagaaaggtataaaaggaaggaacagtggtccaaaattgctcacatccctgtcatatatataaat |
404 |
Q |
| |
|
|||| |||| |||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10666597 |
taaggaactgcacattgaggaatgtccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctgtcatatcaataaat |
10666696 |
T |
|
| Q |
405 |
gacgaagtcacaatatcatgagaacaagttgtgttccagtttcaggta |
452 |
Q |
| |
|
|| |||||||||||| || || || ||||||||||| |||||||||| |
|
|
| T |
10666697 |
tacaaagtcacaatatgat-ag-acgagttgtgttcctgtttcaggta |
10666742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 205 - 491
Target Start/End: Original strand, 10583544 - 10583829
Alignment:
| Q |
205 |
cattgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctct |
304 |
Q |
| |
|
|||| |||||| || ||||||||||||||||||||| ||||||||| | | ||| || || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
10583544 |
cattaccagaagacagcctcccttcctcgctgaaatcacttcaatttgtgggttgtgtaagactcgagtcattaccagaagacagcctccctgactctct |
10583643 |
T |
|
| Q |
305 |
taagcaactagtcatttttagatgtccattgttagtagaaaggtataaaaggaaggaacagtggtccaaaattgctcacatccctgtcatatatataaat |
404 |
Q |
| |
|
| ||| ||| ||| || |||||||||| |||||||||||||||||| ||| | |||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
10583644 |
tgagcgactgaccatccaattttgcccattgttagaagaaaggtataaaaggaatgaatattggtccaaaattgctcacatccctgtcatacaaataaat |
10583743 |
T |
|
| Q |
405 |
gacgaagtcacaatatcatgagaacaagttgtgttccag-tttcaggtatgttccacagttcctaccagaaaactgccaataatcaat |
491 |
Q |
| |
|
|| |||||||||||| || || |||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
10583744 |
cacaaagtcacaatatgat-ag-acaagttgtgttcccgttttcaggtatgttccacatttcctaccagaaaactgccaataatcaat |
10583829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 39 - 245
Target Start/End: Original strand, 10503378 - 10503584
Alignment:
| Q |
39 |
ggtgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagtcctttgatg |
138 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||| ||||||||||||| | ||||||||||| | |||||| |||||||||||||||||||| |
|
|
| T |
10503378 |
ggtgatgatatatttaacaccttgatgaaggagtcgttgcttcccatctcccttgcatctctatatatcagtgatctctatgaaatgaagtcctttgatg |
10503477 |
T |
|
| Q |
139 |
gaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttcctcgctgaa |
238 |
Q |
| |
|
|||||||||||||||| ||||||||||| || |||| ||| ||||||| | |||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10503478 |
gaaatgggcttcgacaaatctcctctctcgaaaatcttgaatttcttaattgtctacagcttgagtcattgccagaaaactgcctcccttcctcgctgaa |
10503577 |
T |
|
| Q |
239 |
attactt |
245 |
Q |
| |
|
||||||| |
|
|
| T |
10503578 |
attactt |
10503584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 31 - 454
Target Start/End: Original strand, 10531569 - 10531989
Alignment:
| Q |
31 |
ttggaaagggtgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagtc |
130 |
Q |
| |
|
|||||| || ||||||||||||||||||| || |||| ||||| ||||| |||||||||||||||| ||||| ||| | ||||||||||||| ||||| |
|
|
| T |
10531569 |
ttggaacggttgatgatatagttaacaccgtgctgaacgagtcattgcttcccatctcccttgtgtctctatctattggtcatctctctgaaataaagtc |
10531668 |
T |
|
| Q |
131 |
ctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttcc |
230 |
Q |
| |
|
||||| |||||||| ||||||||||||||||||||| || |||| ||| ||||| | |||||| ||||||||||||| |||||||||||| |
|
|
| T |
10531669 |
atttgaaggaaatggacttcgacacctctcctctctcaaaaatcttcactttcttaattgcttggagcttgagtcattgccagaaaattgcctcccttcc |
10531768 |
T |
|
| Q |
231 |
tcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctcttaagcaactagtca-tttttag--at |
327 |
Q |
| |
|
|||||||| | ||||||||| | | ||| || || ||||||||||||||||||||||||||| |||||||| ||||| ||| | | || | |
|
|
| T |
10531769 |
tcgctgaagtcacttcaattttcgagttgtgtaagacttgagtcattaccagaagacagcctcccttcctctctta---aactactcactatcgagtttt |
10531865 |
T |
|
| Q |
328 |
gtccattgttagtagaaaggtataaaaggaaggaacagtggtccaaaattgctcacatccctgtcatatatataaatgacgaagtcacaatatcatgaga |
427 |
Q |
| |
|
| |||||||||| |||||||||||||||||||||| | |||||||||||| ||||||||||||||||| ||||| | |||| ||||| |||| |
|
|
| T |
10531866 |
gcccattgttagaagaaaggtataaaaggaaggaaaattggtccaaaatttctcacatccctgtcataataataaacaagcaagttacaat---atgaag |
10531962 |
T |
|
| Q |
428 |
acaagttgtgttccagtttcaggtatg |
454 |
Q |
| |
|
|||||||||||||| |||||||||||| |
|
|
| T |
10531963 |
acaagttgtgttcccgtttcaggtatg |
10531989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 31 - 395
Target Start/End: Original strand, 10680367 - 10680731
Alignment:
| Q |
31 |
ttggaaagggtgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagtc |
130 |
Q |
| |
|
|||||| || ||||||||||||||||||| || |||| ||||| ||||| |||||||||||||||| ||||| ||| | ||||||||||||| ||||| |
|
|
| T |
10680367 |
ttggaacggttgatgatatagttaacaccgtgctgaacgagtcattgcttcccatctcccttgtgtctctatctattggtcatctctctgaaataaagtc |
10680466 |
T |
|
| Q |
131 |
ctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttcc |
230 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||| || |||| ||| ||||| | |||||| |||| |||||||| |||||||||||| |
|
|
| T |
10680467 |
acttgaaggaaatggacttcgacacctctcctctctcaaaaatcttaactttcttaattgctcggagcttgagtcatttccagaaaattgcctcccttcc |
10680566 |
T |
|
| Q |
231 |
tcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctcttaagcaactagtcattttta---gat |
327 |
Q |
| |
|
|||||||||| ||||||||| || | ||| || || |||| ||||||||||||||||||||| |||||||| ||||| ||| | | | | |
|
|
| T |
10680567 |
tcgctgaaatcacttcaatttttgagttgtgtaagacttgagttgttaccagaagacagcctcccttcctctctta---aactactcactatcaagtttt |
10680663 |
T |
|
| Q |
328 |
gtccattgttagtagaaaggtataaaaggaaggaacagtggtccaaaattgctcacatccctgtcata |
395 |
Q |
| |
|
| |||||||||| |||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
10680664 |
gcccattgttagaagaaaggtataaaaggaatgaacatcggtccaaaatttctcacatccctgtcata |
10680731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 262 - 456
Target Start/End: Complemental strand, 10372961 - 10372768
Alignment:
| Q |
262 |
aaaagctagagtcattaccagaagacagcctccctgactctcttaagcaactagtcatttttagatgtccattgttagtagaaaggtataaaaggaagga |
361 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||||| ||| ||| |||||| | |||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
10372961 |
aaaagcttgagtcattaccagaagacagcctcccttcctctctgaagagactggtcattatgggatgcccattgttagaagaaaggtataaaaggaagga |
10372862 |
T |
|
| Q |
362 |
acagtggtccaaaattgctcacatccctgtcatatatataaatgacgaagtcacaatatcatgagaacaagttgtgttccag-tttcaggtatgtt |
456 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||| | ||||| ||| || ||||||||| || || |||||||||||||| | ||||||||||||| |
|
|
| T |
10372861 |
acattggtccaaaattgctcacatccccgtcataaaaataaacgaccaaatcacaatatgat-ag-acaagttgtgttcccgttttcaggtatgtt |
10372768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 30 - 420
Target Start/End: Original strand, 10192883 - 10193272
Alignment:
| Q |
30 |
attggaaagggtgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagt |
129 |
Q |
| |
|
|||| ||||| || ||||||||||||||||||| | || ||| |||||||||||||||||||||||| ||| |||| | |||||| | | ||||||| |
|
|
| T |
10192883 |
attgaaaaggatggtgatatagttaacaccttggtaaaagagccgttgctacccatctcccttgtgtctctgaatattggtgatctctataacatgaagt |
10192982 |
T |
|
| Q |
130 |
cctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttc |
229 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |||| || |||| ||| | |||||||| |||||||| |||| || ||||| ||| | ||||| |
|
|
| T |
10192983 |
cctttgatggaaatgggcttcaacacctctcctttctcgaa-atcttcactttcgtaattgtcaacaacttgagccatttcctgaaaattgcgttccttc |
10193081 |
T |
|
| Q |
230 |
ctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctcttaagcaactagtcatttttagatgt |
329 |
Q |
| |
|
||||||||||| |||| || | | | ||| ||| || || |||||||| |||||| |||||||||| ||||| |||| ||| ||| | | |
|
|
| T |
10193082 |
ctcgctgaaatcacttgaaatttggagttgtgaaagacttgaatcattaccggaagactgcctccctgattctctgaagcgtctaagcatcgtatttttc |
10193181 |
T |
|
| Q |
330 |
ccattgttagtagaaaggtataaaaggaaggaacagtggtccaaaattgctcacatccctgtcatatatataaatgacgaagtcacaatat |
420 |
Q |
| |
|
|| |||||| |||||||||||||||||||||||| |||||||||||| ||| ||| ||||||||| | ||||||| |||| ||||||||| |
|
|
| T |
10193182 |
cctttgttaaaagaaaggtataaaaggaaggaacattggtccaaaatttctctcattcctgtcataaaaataaatggcgaaatcacaatat |
10193272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 30 - 420
Target Start/End: Original strand, 10085963 - 10086352
Alignment:
| Q |
30 |
attggaaagggtgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagt |
129 |
Q |
| |
|
|||| ||||| || ||||||||||||||||||| | || ||| |||||||| ||||||||||||||| ||| |||| | |||||| | | ||||||| |
|
|
| T |
10085963 |
attgaaaaggatggtgatatagttaacaccttggtaaaagagccgttgctaaccatctcccttgtgtctctgaatattggtgatctctataacatgaagt |
10086062 |
T |
|
| Q |
130 |
cctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttc |
229 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |||| || |||| ||| | |||||||| |||||||| |||| || ||||| ||| | ||||| |
|
|
| T |
10086063 |
cctttgatggaaatgggcttcaacacctctcctttctcgaa-atcttcactttcgtaattgtcaacaacttgagccatttcctgaaaattgcgttccttc |
10086161 |
T |
|
| Q |
230 |
ctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctcttaagcaactagtcatttttagatgt |
329 |
Q |
| |
|
||||||||||| |||| || | | | ||| ||| || || |||||||| |||||| |||||||||| ||||| |||| || ||| | | |
|
|
| T |
10086162 |
ctcgctgaaatcacttgaaatttggagttgtgaaagacttgaatcattaccggaagactgcctccctgattctctgaagcgtctgagcatcgtatttttc |
10086261 |
T |
|
| Q |
330 |
ccattgttagtagaaaggtataaaaggaaggaacagtggtccaaaattgctcacatccctgtcatatatataaatgacgaagtcacaatat |
420 |
Q |
| |
|
|| |||||| |||||||||||||||||||||||| |||||||||||| ||| ||| ||||||||| | ||||||| |||| ||||||||| |
|
|
| T |
10086262 |
cctttgttaaaagaaaggtataaaaggaaggaacattggtccaaaatttctctcattcctgtcataaaaataaatggcgaaatcacaatat |
10086352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 44 - 239
Target Start/End: Original strand, 10091598 - 10091784
Alignment:
| Q |
44 |
tgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagtcctttgatggaaat |
143 |
Q |
| |
|
|||||||||||||| |||| ||| ||||||||||||||||||||||||||||| ||| || |||| | | ||||||||||||||||||||| |
|
|
| T |
10091598 |
tgatatagttaacaacttggtgacggagtcgttgctacccatctcccttgtgtctctggat---------ctctataagatgaagtcctttgatggaaat |
10091688 |
T |
|
| Q |
144 |
gggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttcctcgctgaaa |
239 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| ||| | | |||| | ||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
10091689 |
gggcttcgacacctctcctctctccaacgtctcgatttctgtcaatgtcgacagcttcagtcattgccagaaaactgcctcccttcctcgctgaaa |
10091784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 44 - 239
Target Start/End: Original strand, 10198480 - 10198666
Alignment:
| Q |
44 |
tgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagtcctttgatggaaat |
143 |
Q |
| |
|
|||||||||||||| |||| ||| ||||||||||||||||||||||||||||| ||| || |||| | | ||||||||||||||||||||| |
|
|
| T |
10198480 |
tgatatagttaacaacttggtgacggagtcgttgctacccatctcccttgtgtctctggat---------ctctataagatgaagtcctttgatggaaat |
10198570 |
T |
|
| Q |
144 |
gggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttcctcgctgaaa |
239 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| ||| | | |||| | ||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
10198571 |
gggcttcgacacctctcctctctccaacgtctcgatttctgtcaatgtcgacagcttcagtcattgccagaaaactgcctcccttcctcgctgaaa |
10198666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 185 - 394
Target Start/End: Original strand, 10091937 - 10092146
Alignment:
| Q |
185 |
gaattgtcataaacttgagacattgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaa |
284 |
Q |
| |
|
||||||| | || |||||| |||| ||||| ||||||||||| ||||||||||||| |||| |||| | ||||||| ||| || |||||||||||| |
|
|
| T |
10091937 |
gaattgtgaaaagcttgagtcatttccagacaactgcctcccgtcctcgctgaaatcacttagattgagtgattgtaaaatgcttgattcattaccagaa |
10092036 |
T |
|
| Q |
285 |
gacagcctccctgactctcttaagcaactagtcatttttagatgtccattgttagtagaaaggtataaaaggaaggaacagtggtccaaaattgctcaca |
384 |
Q |
| |
|
|||||||||||| ||||||| || |||| | |||| |||||||||| |||||||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
10092037 |
gacagcctcccttcatctcttatcactctgtacattatgggatgcccattgttagaagaaaggtataaaaggaaggaacattggtccaaaatttctcaca |
10092136 |
T |
|
| Q |
385 |
tccctgtcat |
394 |
Q |
| |
|
|||||||||| |
|
|
| T |
10092137 |
tccctgtcat |
10092146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 185 - 394
Target Start/End: Original strand, 10198819 - 10199028
Alignment:
| Q |
185 |
gaattgtcataaacttgagacattgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaa |
284 |
Q |
| |
|
||||||| | || |||||| |||| ||||| ||||||||||| ||||||||||||| |||| |||| | ||||||| ||| || |||||||||||| |
|
|
| T |
10198819 |
gaattgtgaaaagcttgagtcatttccagacaactgcctcccgtcctcgctgaaatcacttagattgagtgattgtaaaatgcttgattcattaccagaa |
10198918 |
T |
|
| Q |
285 |
gacagcctccctgactctcttaagcaactagtcatttttagatgtccattgttagtagaaaggtataaaaggaaggaacagtggtccaaaattgctcaca |
384 |
Q |
| |
|
|||||||||||| ||||||| || |||| | |||| |||||||||| |||||||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
10198919 |
gacagcctcccttcatctcttatcactctgtacattatgggatgcccattgttagaagaaaggtataaaaggaaggaacattggtccaaaatttctcaca |
10199018 |
T |
|
| Q |
385 |
tccctgtcat |
394 |
Q |
| |
|
|||||||||| |
|
|
| T |
10199019 |
tccctgtcat |
10199028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 273 - 452
Target Start/End: Original strand, 10503681 - 10503857
Alignment:
| Q |
273 |
tcattaccagaagacagcctccctgactctcttaagcaactagtcatttttagatgtccattgttagtagaaaggtataaaaggaaggaacagtggtcca |
372 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||| ||| ||||| ||||| ||| |||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
10503681 |
tcattaccagaagacagccttcctgattctcttaagctactgatcattcaaagatgcccaacattagaagaaaggtataaaaggaaggaacattggtcca |
10503780 |
T |
|
| Q |
373 |
aaattgctcacatccctgtcatatatataaatgacgaagtcacaatatcatgagaacaagttgtgttccagtttcaggta |
452 |
Q |
| |
|
||||| ||||||||||||||||| | ||| ||| |||||||||| ||||| ||| | |||||||| |||||||||| |
|
|
| T |
10503781 |
aaatttctcacatccctgtcatagaaatagatggacaagtcacaat---atgaggacaggctgtgttcccgtttcaggta |
10503857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 30 - 167
Target Start/End: Original strand, 10666253 - 10666390
Alignment:
| Q |
30 |
attggaaagggtgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaa--tgaa |
127 |
Q |
| |
|
|||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||| ||| | ||||||| || |||| |
|
|
| T |
10666253 |
attgaaaagggtgatgatatatttaacaccttgatgaaggagtcgttgctacccatatcccttgtgtctctaacgttca--gagctctctgcaatttgaa |
10666350 |
T |
|
| Q |
128 |
gtcctttgatggaaatgggcttcgacacctctcctctctc |
167 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
10666351 |
gtcctttaatggaaatgggcttctacacctctcctctctc |
10666390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 56 - 192
Target Start/End: Complemental strand, 13852699 - 13852563
Alignment:
| Q |
56 |
caccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagtcctttgatggaaatgggcttcgacac |
155 |
Q |
| |
|
|||||||||||||||| |||| |||||||||||||| ||| ||| | |||| |||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
13852699 |
caccttgatgaaggagctgttgatacccatctcccttttgtctctgtttatcggcagtctctctgaaatgaagtctttcgatggaaatgggcttcgacat |
13852600 |
T |
|
| Q |
156 |
ctctcctctctccaacatctctgttttaggaattgtc |
192 |
Q |
| |
|
|||||||||||| | ||||| | ||| ||||||||| |
|
|
| T |
13852599 |
ctctcctctctcaacaatctcggattttggaattgtc |
13852563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 479 - 523
Target Start/End: Complemental strand, 10430786 - 10430742
Alignment:
| Q |
479 |
gccaataatcaatcatctgtacgacacacctcttaatattttcat |
523 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10430786 |
gccaataatcaatcatctgtacgacacacctcttaatattttcat |
10430742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 13163782 - 13163906
Alignment:
| Q |
42 |
gatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagtcctttgatggaa |
141 |
Q |
| |
|
|||||||| |||||||||||| |||||||| |||||| || || || ||||||| | | ||||| | |||||| |||||| || ||||||||||||| |
|
|
| T |
13163782 |
gatgatattgttaacaccttgctgaaggagcggttgctgccaatttcacttgtgtctttgtatatttctaatctctgtgaaataaaatcctttgatggaa |
13163881 |
T |
|
| Q |
142 |
atgggcttcgacacctctcctctct |
166 |
Q |
| |
|
|||| || |||||||| |||||||| |
|
|
| T |
13163882 |
atggactccgacacctatcctctct |
13163906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 10892187 - 10892241
Alignment:
| Q |
112 |
atctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctct |
166 |
Q |
| |
|
|||||||||||||||| | ||| | |||||||||||||||||||||||||||||| |
|
|
| T |
10892187 |
atctctctgaaatgaaatgcttaggtggaaatgggcttcgacacctctcctctct |
10892241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 12131049 - 12131167
Alignment:
| Q |
42 |
gatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagtcctttgatggaa |
141 |
Q |
| |
|
|||||||| |||||||||||| |||||||| |||||| ||||||||||| || | ||| || |||||||||||||||||| || ||||| ||| |
|
|
| T |
12131049 |
gatgatattgttaacaccttgttgaaggagcagttgctgcccatctccctagtctctctcacaatttgttatctctctgaaatgaaatcatttgaaagaa |
12131148 |
T |
|
| Q |
142 |
atgggcttcgacacctctc |
160 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
12131149 |
atgggcttcgaaacctctc |
12131167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 13173830 - 13173954
Alignment:
| Q |
42 |
gatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagtcctttgatggaa |
141 |
Q |
| |
|
|||||||| |||||||||||| |||||||| |||||| || || || ||||||| | | ||||| | |||||| |||||| || ||| ||||||||| |
|
|
| T |
13173830 |
gatgatattgttaacaccttgctgaaggagcggttgctgccaatttcacttgtgtctttgtatatttctaatctctgtgaaataaaatccattgatggaa |
13173929 |
T |
|
| Q |
142 |
atgggcttcgacacctctcctctct |
166 |
Q |
| |
|
|||| || |||||||| |||||||| |
|
|
| T |
13173930 |
atggactccgacacctatcctctct |
13173954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 11128217 - 11128163
Alignment:
| Q |
112 |
atctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctct |
166 |
Q |
| |
|
||||||||||| |||| | ||| | |||||||||||||||||||||||||||||| |
|
|
| T |
11128217 |
atctctctgaagtgaaatgcttaggtggaaatgggcttcgacacctctcctctct |
11128163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 41 - 166
Target Start/End: Original strand, 8864096 - 8864221
Alignment:
| Q |
41 |
tgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagtcctttgatgga |
140 |
Q |
| |
|
||||||| | ||| |||||||| |||||||| ||||||||||| ||| | |||| ||| | || | | ||||||||||| ||| | ||| |||||| |
|
|
| T |
8864096 |
tgatgatgttgttcacaccttgttgaaggagcaattgctacccatttccttggtgtttctgtcaataagtaatctctctgaagcgaaatgcttagatgga |
8864195 |
T |
|
| Q |
141 |
aatgggcttcgacacctctcctctct |
166 |
Q |
| |
|
|||||||||||| ||||||||||||| |
|
|
| T |
8864196 |
aatgggcttcgatacctctcctctct |
8864221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 41 - 166
Target Start/End: Complemental strand, 11146110 - 11145985
Alignment:
| Q |
41 |
tgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagtcctttgatgga |
140 |
Q |
| |
|
||||||||| ||| |||||||| |||||||| ||||||||||| ||| | |||| ||| | || | | ||||||||||| |||| | ||| | |||| |
|
|
| T |
11146110 |
tgatgatattgttcacaccttgttgaaggagcaattgctacccatttccttggtgtttctgtcaataagtaatctctctgaagtgaaatgcttaggtgga |
11146011 |
T |
|
| Q |
141 |
aatgggcttcgacacctctcctctct |
166 |
Q |
| |
|
|||||||||||||| |||||| |||| |
|
|
| T |
11146010 |
aatgggcttcgacaactctccgctct |
11145985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 11157206 - 11157154
Alignment:
| Q |
114 |
ctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctct |
166 |
Q |
| |
|
||||||||| |||| | ||| | |||||||||||||||||||||||||||||| |
|
|
| T |
11157206 |
ctctctgaagtgaaatgcttaggtggaaatgggcttcgacacctctcctctct |
11157154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 405
Target Start/End: Complemental strand, 8585578 - 8585531
Alignment:
| Q |
358 |
aggaacagtggtccaaaattgctcacatccctgtcatatatataaatg |
405 |
Q |
| |
|
||||||| |||||||| ||||||||||| ||||||||| ||||||||| |
|
|
| T |
8585578 |
aggaacattggtccaacattgctcacatacctgtcataaatataaatg |
8585531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 10091812 - 10091850
Alignment:
| Q |
198 |
cttgagacattgccagaaaactgcctcccttcctcgctg |
236 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
10091812 |
cttgagtcattgccagaaaactgtctcccttcctcgctg |
10091850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 10198694 - 10198732
Alignment:
| Q |
198 |
cttgagacattgccagaaaactgcctcccttcctcgctg |
236 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
10198694 |
cttgagtcattgccagaaaactgtctcccttcctcgctg |
10198732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 295
Target Start/End: Original strand, 9852775 - 9852860
Alignment:
| Q |
210 |
ccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccc |
295 |
Q |
| |
|
|||| |||||||||||| || |||||||||| |||| |||| || ||||| ||||| ||||||||||||||| || ||||||| |
|
|
| T |
9852775 |
ccagtaaactgcctcccatcatcgctgaaatcacttaaatttgttgattgtaagaagcttgagtcattaccagaaaactgcctccc |
9852860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 24 - 523
Target Start/End: Complemental strand, 54890 - 54396
Alignment:
| Q |
24 |
ttgtggattggaaagggtgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaa |
123 |
Q |
| |
|
||||| |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||| |||| | |||||||||||| |
|
|
| T |
54890 |
ttgtgtattgtaaagggtgatgatatatttaacaccttgatgaaggagtcattgctacccatctcccttgtgcatctacgtatctgtgatctctctgaaa |
54791 |
T |
|
| Q |
124 |
tgaagtcctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcct |
223 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| | |||||| |||||||||||||||||||||||||||| |
|
|
| T |
54790 |
tgaagtcctttgatggaaatgggctgcgacacctctcctctctccaaagtctctgttttttgttttgtcaacaacttgagacattgccagaaaactgcct |
54691 |
T |
|
| Q |
224 |
cccttcctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctcttaagcaactagtcattttt |
323 |
Q |
| |
|
||||||||||||||||| |||| |||| | | ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||| | |
|
|
| T |
54690 |
cccttcctcgctgaaatcacttgaattttatgattgtaaaaagctagagtcattaccagaagacagcctccctgaatctcttaaggaactgtacatcgat |
54591 |
T |
|
| Q |
324 |
agatgtccattgttagtagaaaggtataaaaggaaggaacagtggtccaaaattgctcacatccctgtcatatatataaatgacgaagtcacaatatcat |
423 |
Q |
| |
|
| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||||||| || |
|
|
| T |
54590 |
ggttgcccattgttagaagaaaggtataaaaggaaggaacattggtccaaaattgctcacatccctgtcatatcaataaattacaaagtcacaatatgat |
54491 |
T |
|
| Q |
424 |
gagaacaagttgtgttccagtttcaggtatgttccacagttcctaccagaaaactgccaataatcaatcatctgtacgacacacctcttaatattttcat |
523 |
Q |
| |
|
|| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54490 |
-ag-acaagttgtgttcccatttcaggtatgttccacagttcctaccagaaa---gccaataatcaatcatctgtacgacacacctcttaatattttcat |
54396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 140; Significance: 4e-73; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 37 - 404
Target Start/End: Original strand, 26909682 - 26910049
Alignment:
| Q |
37 |
agggtgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagtcctttga |
136 |
Q |
| |
|
||||| |||||| | ||||||||||||||||||||| ||||||||||||||||||||| | |||| | |||| |||||| |||||||||||||||||| |
|
|
| T |
26909682 |
agggtcatgatacatttaacaccttgatgaaggagttgttgctacccatctcccttgtttctctacaaatcatggatctctatgaaatgaagtcctttga |
26909781 |
T |
|
| Q |
137 |
tggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttcctcgctg |
236 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| |||| |||| |||||| | |||| || |||| ||||||||||||||||||||||||||| |
|
|
| T |
26909782 |
tggaaatgggcttcgacgcctctcctctctccaaaatcttcactttattaattgtgaacaactcaagtcatttccagaaaactgcctcccttcctcgctg |
26909881 |
T |
|
| Q |
237 |
aaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctcttaagcaactagtcatttttagatgtccattgt |
336 |
Q |
| |
|
|||| |||||||| | | | ||| | || || |||||||||||||||||||||||||| ||||||||| || || | || | || ||||||| |
|
|
| T |
26909882 |
aaatatcttcaattttatggctgtgagaaacttgagtcattaccagaagacagcctccccgactctcttgagatgctggaaatgtcatcttgcccattgt |
26909981 |
T |
|
| Q |
337 |
tagtagaaaggtataaaaggaaggaacagtggtccaaaattgctcacatccctgtcatatatataaat |
404 |
Q |
| |
|
||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
26909982 |
tagaagaaaggtacaaaaggaaggaacattggtccaaaattgctcacatccctgtcatacaaataaat |
26910049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 15 - 420
Target Start/End: Complemental strand, 17850220 - 17849815
Alignment:
| Q |
15 |
ctttcatcattgtggattggaaagggtgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatc |
114 |
Q |
| |
|
|||||||||||| | ||||||||| |||||||||||| |||||||||||||||||||||||||| || || ||||| |||| ||| |||| | ||| |
|
|
| T |
17850220 |
ctttcatcattgagtcttggaaaggatgatgatatagtgaacaccttgatgaaggagtcgttgctcccaatatccctcgtgtctctgactatctgtcatc |
17850121 |
T |
|
| Q |
115 |
tctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccaga |
214 |
Q |
| |
|
||| | | |||| ||||||||||||||||| |||||||| || |||||||| || ||| ||| || ||||| |||||||| |||||||| | |
|
|
| T |
17850120 |
tctataatctgaactcctttgatggaaatggacttcgacatctttcctctcttgaaagtcttgactttcttaactgtcaacaacttgagtcattgccaca |
17850021 |
T |
|
| Q |
215 |
aaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctcttaagcaacta |
314 |
Q |
| |
|
|||||||||||||||||| ||||||| ||| |||| | | ||||||| || ||||| ||||||||||||||||||||| ||||||||||| ||| |
|
|
| T |
17850020 |
aaactgcctcccttcctcactgaaatcgcttgaattttgttattgtaaaagacttgagtcgttaccagaagacagcctcccttcctctcttaagcgactg |
17849921 |
T |
|
| Q |
315 |
gtcatttttagatgtccattgttagtagaaaggtataaaaggaaggaacagtggtccaaaattgctcacatccctgtcatatatataaatgacgaagtca |
414 |
Q |
| |
|
||||||| |||| || | |||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||| | || | ||| |||||| |
|
|
| T |
17849920 |
gtcatttggcgatgccctatattagaagaaaggtataaaaggcaggaacattggtccaaaattgctcacatccctgtcatagaaattgaggaccaagtca |
17849821 |
T |
|
| Q |
415 |
caatat |
420 |
Q |
| |
|
|||||| |
|
|
| T |
17849820 |
caatat |
17849815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 86; Significance: 7e-41; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 40 - 420
Target Start/End: Complemental strand, 44954932 - 44954552
Alignment:
| Q |
40 |
gtgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagtcctttgatgg |
139 |
Q |
| |
|
||||||||| ||||| |||||| | | |||| || ||||||||||||||||||||| ||| ||||| |||||| |||||||||||||||| | || |
|
|
| T |
44954932 |
gtgatgatactgttaagaccttggttatggagccgctgctacccatctcccttgtgtctctgactatcagttatctggatgaaatgaagtcctttcaagg |
44954833 |
T |
|
| Q |
140 |
aaatgggcttcgacacct-ctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttcctcgctgaa |
238 |
Q |
| |
|
||||||||||| |||||| |||||||||| || ||||| ||| | || ||||| | |||||| |||| ||||||||||| || |||||||||||||| |
|
|
| T |
44954832 |
aaatgggcttcaacacctactcctctctcgaaaatctccactttcgtaactgtcaacagcttgagtcatttccagaaaactgtcttccttcctcgctgaa |
44954733 |
T |
|
| Q |
239 |
attacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctcttaagcaactagtcatttttagatgtccattgtta |
338 |
Q |
| |
|
|| ||||||||| || ||| || | || ||||| ||||||||||| |||||||| |||||||||| | ||| ||||||| |||| || | | | |
|
|
| T |
44954732 |
atcacttcaatttttgttttgtgaaga-cttgagtcgttaccagaagaaagcctccccaactctcttaatcgactggtcatttggcgatgccctgtatca |
44954634 |
T |
|
| Q |
339 |
gtagaaaggtataaaaggaaggaacagtggtccaaaattgctcacatccctgtcatatatataaatgacgaagtcacaatat |
420 |
Q |
| |
|
| ||||||||||| |||||||||||| ||||||||||||||| | || | ||||||| | ||| ||| | |||||||||||| |
|
|
| T |
44954633 |
gaagaaaggtatagaaggaaggaacattggtccaaaattgctaaaattcatgtcatagaaatagatggccaagtcacaatat |
44954552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 38 - 167
Target Start/End: Original strand, 11487824 - 11487953
Alignment:
| Q |
38 |
gggtgatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagtcctttgat |
137 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||| |||| ||| || || |||||||| ||| |||| |
|
|
| T |
11487824 |
gggtgatgatatacttaacaccttgatgaagcagtcgttgctacccatctcccttgtgtctctgactatcgattgtcgctacaaaatgaagccctatgat |
11487923 |
T |
|
| Q |
138 |
ggaaatgggcttcgacacctctcctctctc |
167 |
Q |
| |
|
|||| |||||||||| |||||||||||||| |
|
|
| T |
11487924 |
ggaagtgggcttcgatacctctcctctctc |
11487953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 143206 - 143082
Alignment:
| Q |
42 |
gatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagtcctttgatggaa |
141 |
Q |
| |
|
|||||||| |||||||||||| |||||||| |||||| || || || ||||||| | | ||||| | |||||| |||||| || ||||||||||||| |
|
|
| T |
143206 |
gatgatattgttaacaccttgctgaaggagcggttgctgccaatttcacttgtgtctttgtatatttctaatctctgtgaaataaaatcctttgatggaa |
143107 |
T |
|
| Q |
142 |
atgggcttcgacacctctcctctct |
166 |
Q |
| |
|
|||| || |||||||| |||||||| |
|
|
| T |
143106 |
atggactccgacacctatcctctct |
143082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 133158 - 133034
Alignment:
| Q |
42 |
gatgatatagttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatctatatatcaattatctctctgaaatgaagtcctttgatggaa |
141 |
Q |
| |
|
|||||||| |||||||||||| |||||||| |||||| || || || ||||||| | | ||||| | |||||| |||||| || ||| ||||||||| |
|
|
| T |
133158 |
gatgatattgttaacaccttgctgaaggagcggttgctgccaatttcacttgtgtctttgtatatttctaatctctgtgaaataaaatccattgatggaa |
133059 |
T |
|
| Q |
142 |
atgggcttcgacacctctcctctct |
166 |
Q |
| |
|
|||| || |||||||| |||||||| |
|
|
| T |
133058 |
atggactccgacacctatcctctct |
133034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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