View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7446_low_7 (Length: 246)
Name: NF7446_low_7
Description: NF7446
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7446_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 4 - 225
Target Start/End: Complemental strand, 34976231 - 34976010
Alignment:
| Q |
4 |
atgtcgaagaatatgaaagcatgtgtcgaaaaaggcaaacacagcccaaatttcagaatttattgagacagtaagcaataagtgttgcttctagtcctca |
103 |
Q |
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| T |
34976231 |
atgtcaaataatttgaaagcatgtgtcgaaaaaggcaaacacagcccaaatttcagaatttattgagacagtaagcaataagtgttgcttctagtcctca |
34976132 |
T |
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| Q |
104 |
ctctatgaagccaatcctatagcacagtactatgaaatggttcaacaaaactgaatacagcacctatttccaaccaatgaagacacaaacaaaagatgta |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34976131 |
ctctatgaagccaatcctatagcacagtactatgaaatggttcaacaaaactgaatacagcacctatttccaaccaatgaagacacaaacaaaagatgta |
34976032 |
T |
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| Q |
204 |
gcatgtgattgtgctctactaa |
225 |
Q |
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| T |
34976031 |
gcatgtgattgtgctctactaa |
34976010 |
T |
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