View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7447_low_2 (Length: 655)

Name: NF7447_low_2
Description: NF7447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7447_low_2
NF7447_low_2
[»] chr4 (62 HSPs)
chr4 (19-648)||(26187577-26188206)
chr4 (439-563)||(55073787-55073912)
chr4 (392-648)||(43477301-43477549)
chr4 (489-564)||(15225805-15225880)
chr4 (146-281)||(13520868-13521005)
chr4 (582-648)||(15805093-15805159)
chr4 (489-553)||(26034839-26034903)
chr4 (580-627)||(6943378-6943425)
chr4 (489-564)||(14898995-14899070)
chr4 (489-560)||(34561068-34561139)
chr4 (490-564)||(12488438-12488512)
chr4 (505-571)||(47575295-47575361)
chr4 (489-566)||(13521364-13521441)
chr4 (147-326)||(3992653-3992836)
chr4 (489-553)||(3997441-3997505)
chr4 (489-553)||(7902490-7902554)
chr4 (489-553)||(9185063-9185127)
chr4 (489-553)||(9190928-9190992)
chr4 (489-564)||(14868447-14868522)
chr4 (489-564)||(14877412-14877487)
chr4 (506-564)||(14953451-14953509)
chr4 (505-571)||(31297890-31297956)
chr4 (508-558)||(32545529-32545579)
chr4 (401-481)||(13521301-13521382)
chr4 (490-563)||(15011196-15011269)
chr4 (401-481)||(41817492-41817573)
chr4 (433-481)||(7902460-7902508)
chr4 (147-282)||(7899838-7899971)
chr4 (580-627)||(13065254-13065301)
chr4 (580-643)||(30054513-30054576)
chr4 (580-627)||(39216536-39216583)
chr4 (507-566)||(52742621-52742680)
chr4 (490-564)||(10713580-10713654)
chr4 (490-564)||(10927350-10927424)
chr4 (506-564)||(25690634-25690692)
chr4 (581-615)||(33462814-33462848)
chr4 (147-330)||(39320591-39320768)
chr4 (221-326)||(41817816-41817922)
chr4 (401-481)||(34561121-34561202)
chr4 (397-449)||(9185006-9185058)
chr4 (511-551)||(15539572-15539612)
chr4 (396-471)||(52742535-52742611)
chr4 (481-547)||(1150729-1150796)
chr4 (580-619)||(12875024-12875063)
chr4 (580-615)||(42758305-42758340)
chr4 (581-615)||(8029792-8029826)
chr4 (581-615)||(31269636-31269670)
chr4 (401-470)||(31297810-31297880)
chr4 (581-615)||(33468453-33468487)
chr4 (581-615)||(37259314-37259348)
chr4 (507-553)||(39320213-39320259)
chr4 (580-648)||(42316078-42316145)
chr4 (221-294)||(34561471-34561544)
chr4 (401-476)||(47575363-47575440)
chr4 (580-624)||(2820407-2820451)
chr4 (481-532)||(3309918-3309970)
chr4 (489-553)||(8660782-8660846)
chr4 (397-449)||(9190871-9190923)
chr4 (401-449)||(15225885-15225933)
chr4 (587-643)||(23093696-23093752)
chr4 (148-231)||(31297409-31297493)
chr4 (489-537)||(41817462-41817510)
[»] chr7 (75 HSPs)
chr7 (402-629)||(10532128-10532354)
chr7 (402-631)||(13343724-13343955)
chr7 (481-643)||(9008716-9008881)
chr7 (505-648)||(10499499-10499644)
chr7 (505-648)||(10504528-10504673)
chr7 (580-648)||(10392545-10392613)
chr7 (580-648)||(26286594-26286662)
chr7 (146-281)||(9649843-9649980)
chr7 (146-326)||(27257246-27257430)
chr7 (489-553)||(8954646-8954710)
chr7 (580-627)||(3285098-3285145)
chr7 (580-627)||(10387807-10387854)
chr7 (148-231)||(10531748-10531831)
chr7 (489-560)||(27256881-27256952)
chr7 (489-547)||(845987-846045)
chr7 (489-547)||(853364-853422)
chr7 (489-547)||(1211368-1211426)
chr7 (489-571)||(8076683-8076765)
chr7 (481-546)||(15566033-15566099)
chr7 (490-564)||(18426567-18426641)
chr7 (489-566)||(9650339-9650416)
chr7 (489-553)||(838811-838875)
chr7 (489-553)||(1203991-1204055)
chr7 (481-544)||(11297413-11297477)
chr7 (147-231)||(13343311-13343395)
chr7 (489-553)||(19096906-19096970)
chr7 (156-294)||(23866787-23866924)
chr7 (507-566)||(2629294-2629353)
chr7 (433-499)||(7838761-7838828)
chr7 (147-294)||(10499011-10499158)
chr7 (147-294)||(10504040-10504187)
chr7 (490-553)||(45169311-45169374)
chr7 (433-492)||(47552628-47552687)
chr7 (489-543)||(1043880-1043934)
chr7 (401-467)||(11017399-11017465)
chr7 (490-564)||(14259646-14259720)
chr7 (490-564)||(20488588-20488662)
chr7 (401-481)||(9650276-9650357)
chr7 (454-538)||(13337388-13337470)
chr7 (489-546)||(19640957-19641014)
chr7 (401-481)||(27256934-27257015)
chr7 (580-648)||(3046147-3046215)
chr7 (505-553)||(36477621-36477669)
chr7 (489-553)||(40864742-40864806)
chr7 (505-564)||(20485227-20485286)
chr7 (580-627)||(21671792-21671839)
chr7 (581-615)||(8268907-8268941)
chr7 (401-470)||(10488613-10488683)
chr7 (505-547)||(11017476-11017518)
chr7 (490-564)||(16459761-16459835)
chr7 (489-547)||(18385145-18385203)
chr7 (454-538)||(13345293-13345375)
chr7 (586-631)||(15973347-15973392)
chr7 (517-553)||(29727211-29727247)
chr7 (407-481)||(15565611-15565686)
chr7 (432-470)||(1043927-1043965)
chr7 (581-615)||(4930833-4930867)
chr7 (401-481)||(8076747-8076829)
chr7 (402-468)||(10499415-10499481)
chr7 (402-468)||(10504444-10504510)
chr7 (436-470)||(11297461-11297495)
chr7 (153-231)||(13346253-13346331)
chr7 (490-564)||(14928016-14928090)
chr7 (490-564)||(15351482-15351556)
chr7 (581-615)||(27238762-27238796)
chr7 (404-481)||(40864682-40864760)
chr7 (581-615)||(42626038-42626072)
chr7 (149-263)||(1044346-1044462)
chr7 (577-610)||(6590469-6590502)
chr7 (505-538)||(13337984-13338017)
chr7 (401-470)||(14927953-14928022)
chr7 (401-470)||(15351419-15351488)
chr7 (401-470)||(29727117-29727186)
chr7 (583-615)||(4580113-4580145)
chr7 (603-643)||(13343994-13344034)
[»] chr3 (74 HSPs)
chr3 (401-631)||(35456234-35456462)
chr3 (433-545)||(47540841-47540954)
chr3 (401-564)||(11997301-11997460)
chr3 (147-294)||(8888978-8889128)
chr3 (433-531)||(47541257-47541356)
chr3 (147-294)||(8070741-8070888)
chr3 (147-294)||(3673628-3673777)
chr3 (147-294)||(3693682-3693831)
chr3 (489-571)||(8070312-8070394)
chr3 (147-294)||(3034706-3034855)
chr3 (481-563)||(6595763-6595846)
chr3 (147-294)||(8884232-8884382)
chr3 (584-647)||(11399940-11400003)
chr3 (489-571)||(3034276-3034358)
chr3 (489-571)||(3673219-3673301)
chr3 (489-571)||(3693251-3693333)
chr3 (489-571)||(8888563-8888645)
chr3 (481-545)||(16023191-16023256)
chr3 (587-631)||(28125701-28125745)
chr3 (490-564)||(9706971-9707045)
chr3 (481-570)||(12899113-12899203)
chr3 (490-564)||(16749300-16749374)
chr3 (490-564)||(19776525-19776599)
chr3 (445-543)||(47540466-47540562)
chr3 (489-546)||(8197110-8197167)
chr3 (489-546)||(8223593-8223650)
chr3 (489-553)||(10585569-10585633)
chr3 (580-648)||(10708153-10708221)
chr3 (391-481)||(3673283-3673374)
chr3 (391-481)||(3693315-3693406)
chr3 (490-553)||(37438940-37439003)
chr3 (489-571)||(8883803-8883885)
chr3 (489-546)||(29886-29943)
chr3 (401-481)||(3034340-3034421)
chr3 (401-470)||(6595710-6595779)
chr3 (401-481)||(8070376-8070457)
chr3 (401-481)||(8883867-8883948)
chr3 (401-481)||(8888627-8888708)
chr3 (436-543)||(18012001-18012110)
chr3 (489-546)||(18350154-18350211)
chr3 (490-551)||(49020106-49020167)
chr3 (489-553)||(14425222-14425286)
chr3 (490-553)||(8488771-8488834)
chr3 (580-631)||(17025554-17025605)
chr3 (495-546)||(51922992-51923043)
chr3 (506-552)||(4106722-4106768)
chr3 (506-552)||(4110574-4110620)
chr3 (184-294)||(10585102-10585211)
chr3 (506-552)||(15965707-15965753)
chr3 (506-552)||(15969631-15969677)
chr3 (506-552)||(15973555-15973601)
chr3 (490-564)||(22758560-22758634)
chr3 (433-481)||(10585539-10585587)
chr3 (489-553)||(45903924-45903988)
chr3 (580-615)||(12965336-12965371)
chr3 (401-452)||(14425169-14425220)
chr3 (396-466)||(53502447-53502518)
chr3 (581-615)||(7570666-7570700)
chr3 (581-615)||(23660914-23660948)
chr3 (581-615)||(23665573-23665607)
chr3 (581-615)||(24037821-24037855)
chr3 (585-631)||(25726231-25726277)
chr3 (581-615)||(46964623-46964657)
chr3 (581-615)||(55326389-55326423)
chr3 (433-470)||(12899092-12899129)
chr3 (433-470)||(16023240-16023277)
chr3 (505-558)||(19340119-19340172)
chr3 (576-629)||(32746243-32746296)
chr3 (401-481)||(45903861-45903942)
chr3 (515-571)||(429062-429118)
chr3 (583-615)||(3419600-3419632)
chr3 (582-610)||(12112118-12112146)
chr3 (147-179)||(28126365-28126397)
chr3 (505-553)||(53358757-53358805)
[»] scaffold0008 (2 HSPs)
scaffold0008 (401-623)||(256391-256612)
scaffold0008 (150-292)||(257703-257844)
[»] chr6 (45 HSPs)
chr6 (402-638)||(15990990-15991225)
chr6 (402-553)||(2759671-2759819)
chr6 (433-551)||(9751106-9751225)
chr6 (489-564)||(16625056-16625131)
chr6 (577-627)||(19994844-19994894)
chr6 (481-571)||(2862842-2862933)
chr6 (490-564)||(31477084-31477158)
chr6 (402-470)||(2759484-2759552)
chr6 (580-648)||(17914163-17914231)
chr6 (489-553)||(27073636-27073700)
chr6 (580-643)||(17599950-17600013)
chr6 (508-571)||(24588576-24588639)
chr6 (490-564)||(15704291-15704365)
chr6 (488-564)||(6112137-6112213)
chr6 (493-553)||(26981246-26981306)
chr6 (392-467)||(28964130-28964206)
chr6 (584-631)||(2759865-2759912)
chr6 (435-470)||(2882126-2882161)
chr6 (490-564)||(16761022-16761097)
chr6 (505-564)||(19772407-19772466)
chr6 (490-553)||(27324441-27324504)
chr6 (436-470)||(2862824-2862858)
chr6 (506-564)||(22949872-22949930)
chr6 (506-564)||(22953828-22953886)
chr6 (506-564)||(23872316-23872374)
chr6 (506-564)||(23876272-23876330)
chr6 (581-648)||(12405812-12405876)
chr6 (147-231)||(2862426-2862510)
chr6 (489-553)||(18387583-18387647)
chr6 (481-571)||(2882145-2882236)
chr6 (505-552)||(14073787-14073834)
chr6 (490-545)||(14322790-14322845)
chr6 (581-616)||(16835608-16835643)
chr6 (581-615)||(11428571-11428605)
chr6 (581-615)||(14509584-14509618)
chr6 (490-564)||(22806991-22807065)
chr6 (147-193)||(24588522-24588568)
chr6 (147-193)||(28963740-28963786)
chr6 (576-613)||(13657511-13657548)
chr6 (257-326)||(15645702-15645771)
chr6 (147-231)||(2881729-2881813)
chr6 (147-179)||(2886402-2886434)
chr6 (433-481)||(6112108-6112156)
chr6 (505-553)||(15640961-15641009)
chr6 (401-449)||(16625136-16625184)
[»] scaffold0009 (2 HSPs)
scaffold0009 (413-564)||(71772-71920)
scaffold0009 (580-648)||(147841-147909)
[»] chr2 (47 HSPs)
chr2 (489-615)||(17452965-17453098)
chr2 (481-561)||(22845045-22845126)
chr2 (147-294)||(10159601-10159749)
chr2 (481-564)||(25375529-25375613)
chr2 (407-543)||(30635457-30635590)
chr2 (401-470)||(22845110-22845179)
chr2 (489-553)||(6856848-6856912)
chr2 (490-564)||(1284154-1284228)
chr2 (489-546)||(26897285-26897342)
chr2 (489-546)||(34070077-34070134)
chr2 (580-648)||(19578029-19578097)
chr2 (481-544)||(30641481-30641545)
chr2 (147-294)||(6296796-6296942)
chr2 (577-648)||(40847037-40847108)
chr2 (489-563)||(377669-377743)
chr2 (505-571)||(10160115-10160181)
chr2 (491-553)||(17327711-17327773)
chr2 (506-564)||(30344312-30344370)
chr2 (401-470)||(7559667-7559736)
chr2 (489-546)||(24292841-24292898)
chr2 (221-294)||(28856150-28856223)
chr2 (505-566)||(30658815-30658876)
chr2 (402-470)||(17452904-17452972)
chr2 (433-481)||(30641460-30641508)
chr2 (392-470)||(28855838-28855917)
chr2 (489-532)||(30629531-30629574)
chr2 (490-564)||(23068133-23068207)
chr2 (516-553)||(7559757-7559794)
chr2 (402-481)||(10160036-10160117)
chr2 (489-546)||(24286273-24286330)
chr2 (401-470)||(25375597-25375666)
chr2 (434-501)||(19589052-19589120)
chr2 (514-545)||(3238840-3238871)
chr2 (490-553)||(9785799-9785862)
chr2 (489-571)||(13290942-13291025)
chr2 (580-615)||(30651525-30651560)
chr2 (581-615)||(1934443-1934477)
chr2 (392-481)||(6297200-6297290)
chr2 (581-615)||(9184867-9184901)
chr2 (264-326)||(17452512-17452573)
chr2 (581-615)||(31327364-31327398)
chr2 (147-196)||(35602754-35602804)
chr2 (147-231)||(30659283-30659368)
chr2 (489-546)||(42248885-42248942)
chr2 (477-532)||(30619543-30619599)
chr2 (516-552)||(38426927-38426962)
chr2 (576-616)||(38591822-38591862)
[»] chr5 (60 HSPs)
chr5 (147-294)||(562530-562677)
chr5 (147-294)||(557758-557907)
chr5 (147-282)||(12044014-12044152)
chr5 (481-564)||(3666553-3666637)
chr5 (576-648)||(16115678-16115750)
chr5 (147-291)||(42002498-42002645)
chr5 (529-638)||(1429584-1429697)
chr5 (147-294)||(36941147-36941296)
chr5 (489-571)||(36936890-36936972)
chr5 (489-571)||(36941644-36941726)
chr5 (489-571)||(41997297-41997379)
chr5 (489-571)||(42002066-42002148)
chr5 (147-326)||(21322921-21323104)
chr5 (146-294)||(32460426-32460577)
chr5 (481-564)||(36949425-36949509)
chr5 (147-279)||(41997719-41997854)
chr5 (184-326)||(13300406-13300553)
chr5 (505-571)||(557329-557395)
chr5 (146-326)||(3666905-3667084)
chr5 (490-564)||(10754090-10754164)
chr5 (489-571)||(13300869-13300951)
chr5 (489-571)||(23976966-23977048)
chr5 (489-571)||(32460923-32461005)
chr5 (577-630)||(2859941-2859994)
chr5 (489-553)||(21826874-21826938)
chr5 (580-648)||(23757264-23757332)
chr5 (580-648)||(23822720-23822788)
chr5 (489-553)||(26869693-26869757)
chr5 (489-553)||(31732188-31732252)
chr5 (505-571)||(562101-562167)
chr5 (401-481)||(36936827-36936908)
chr5 (401-481)||(36941581-36941662)
chr5 (401-470)||(36949493-36949562)
chr5 (505-553)||(15395235-15395283)
chr5 (505-553)||(21323371-21323419)
chr5 (583-630)||(2848104-2848151)
chr5 (580-630)||(15414346-15414394)
chr5 (147-229)||(36936393-36936476)
chr5 (404-481)||(32460863-32460941)
chr5 (516-553)||(8770894-8770931)
chr5 (489-546)||(41099188-41099245)
chr5 (401-481)||(41997361-41997442)
chr5 (401-481)||(42002130-42002211)
chr5 (489-553)||(12044509-12044573)
chr5 (433-481)||(31732234-31732282)
chr5 (401-452)||(21826940-21826991)
chr5 (434-481)||(23976937-23976984)
chr5 (401-452)||(26869640-26869691)
chr5 (523-558)||(27425136-27425171)
chr5 (147-294)||(31732615-31732760)
chr5 (580-615)||(39519006-39519041)
chr5 (436-470)||(3666621-3666655)
chr5 (581-615)||(4872512-4872546)
chr5 (404-470)||(24435503-24435569)
chr5 (401-465)||(557408-557473)
chr5 (401-465)||(562180-562245)
chr5 (405-470)||(1429496-1429561)
chr5 (401-470)||(8770952-8771021)
chr5 (491-564)||(24435564-24435637)
chr5 (250-294)||(23976422-23976466)
[»] scaffold0182 (3 HSPs)
scaffold0182 (147-294)||(8764-8914)
scaffold0182 (489-571)||(9259-9341)
scaffold0182 (433-481)||(9229-9277)
[»] chr8 (56 HSPs)
chr8 (147-294)||(31448747-31448897)
chr8 (412-611)||(42972707-42972905)
chr8 (147-294)||(4237224-4237373)
chr8 (147-294)||(4241963-4242112)
chr8 (580-638)||(7002238-7002296)
chr8 (489-571)||(31449244-31449326)
chr8 (489-566)||(4237720-4237797)
chr8 (489-566)||(4242459-4242536)
chr8 (481-544)||(17153198-17153262)
chr8 (489-553)||(19393110-19393174)
chr8 (489-571)||(8330742-8330824)
chr8 (489-546)||(4582675-4582732)
chr8 (489-566)||(43302063-43302140)
chr8 (489-553)||(16066596-16066660)
chr8 (489-553)||(22104326-22104390)
chr8 (489-544)||(17157431-17157486)
chr8 (401-470)||(10933948-10934018)
chr8 (506-564)||(18861966-18862024)
chr8 (490-564)||(21411663-21411737)
chr8 (490-564)||(21806155-21806229)
chr8 (401-481)||(4237657-4237738)
chr8 (401-481)||(4242396-4242477)
chr8 (221-294)||(8330335-8330408)
chr8 (490-563)||(21384385-21384458)
chr8 (490-563)||(21387805-21387878)
chr8 (584-629)||(24672779-24672824)
chr8 (587-627)||(2966228-2966268)
chr8 (489-553)||(14036106-14036170)
chr8 (505-553)||(37772358-37772406)
chr8 (580-615)||(17953422-17953457)
chr8 (580-643)||(23548066-23548129)
chr8 (581-648)||(26779693-26779760)
chr8 (146-217)||(42973235-42973306)
chr8 (506-564)||(21827335-21827393)
chr8 (489-547)||(25367365-25367423)
chr8 (598-648)||(28863959-28864009)
chr8 (489-547)||(34818085-34818143)
chr8 (401-481)||(31449181-31449262)
chr8 (580-648)||(22714444-22714511)
chr8 (401-452)||(22104392-22104443)
chr8 (392-470)||(25367293-25367372)
chr8 (159-294)||(43301638-43301776)
chr8 (581-615)||(15951002-15951036)
chr8 (581-615)||(33417142-33417176)
chr8 (581-615)||(38181692-38181726)
chr8 (581-615)||(40125345-40125379)
chr8 (401-481)||(43302002-43302081)
chr8 (401-481)||(8330679-8330760)
chr8 (433-470)||(17153246-17153283)
chr8 (401-481)||(34818022-34818103)
chr8 (481-540)||(10933904-10933964)
chr8 (511-547)||(15197295-15197331)
chr8 (580-612)||(17794090-17794122)
chr8 (401-449)||(19393057-19393105)
chr8 (221-293)||(25361679-25361750)
chr8 (250-294)||(37772780-37772824)
[»] chr1 (53 HSPs)
chr1 (481-553)||(1067132-1067205)
chr1 (489-569)||(14804139-14804219)
chr1 (481-547)||(13893973-13894040)
chr1 (580-643)||(16036202-16036265)
chr1 (489-571)||(40232767-40232849)
chr1 (481-553)||(17213814-17213887)
chr1 (489-553)||(14819623-14819687)
chr1 (489-553)||(22428575-22428639)
chr1 (580-631)||(12260586-12260637)
chr1 (489-571)||(3094722-3094804)
chr1 (490-564)||(39243403-39243477)
chr1 (490-564)||(39246958-39247032)
chr1 (489-571)||(41097337-41097419)
chr1 (490-564)||(41387355-41387429)
chr1 (489-546)||(52100601-52100658)
chr1 (481-545)||(23285210-23285274)
chr1 (579-638)||(8138215-8138274)
chr1 (580-623)||(20107953-20107996)
chr1 (506-564)||(1924450-1924508)
chr1 (147-293)||(3095152-3095300)
chr1 (506-564)||(20923464-20923522)
chr1 (401-481)||(3094786-3094867)
chr1 (489-546)||(21498309-21498366)
chr1 (401-481)||(19725223-19725303)
chr1 (580-615)||(7882597-7882632)
chr1 (507-542)||(39037047-39037082)
chr1 (491-573)||(23254568-23254650)
chr1 (147-208)||(8273059-8273120)
chr1 (401-470)||(19727073-19727142)
chr1 (489-553)||(2367694-2367758)
chr1 (402-470)||(16836612-16836680)
chr1 (489-553)||(26199009-26199073)
chr1 (481-564)||(27308258-27308342)
chr1 (433-481)||(40232737-40232785)
chr1 (433-481)||(41097307-41097355)
chr1 (413-468)||(1067191-1067246)
chr1 (401-452)||(26199075-26199126)
chr1 (505-547)||(8267247-8267289)
chr1 (581-615)||(16834086-16834120)
chr1 (522-564)||(16836698-16836740)
chr1 (581-615)||(23192276-23192310)
chr1 (581-615)||(25844366-25844400)
chr1 (221-322)||(33055812-33055918)
chr1 (581-615)||(38621319-38621353)
chr1 (433-470)||(13894024-13894061)
chr1 (146-244)||(14204446-14204546)
chr1 (407-467)||(27308210-27308271)
chr1 (221-293)||(40232345-40232418)
chr1 (489-553)||(2384625-2384689)
chr1 (434-470)||(8267202-8267238)
chr1 (580-648)||(11806838-11806906)
chr1 (581-613)||(19798450-19798482)
chr1 (581-613)||(40166577-40166609)
[»] scaffold0357 (1 HSPs)
scaffold0357 (489-553)||(3726-3790)
[»] scaffold0327 (1 HSPs)
scaffold0327 (489-553)||(19601-19665)
[»] scaffold0628 (2 HSPs)
scaffold0628 (147-264)||(5760-5877)
scaffold0628 (490-564)||(7028-7102)
[»] scaffold0132 (2 HSPs)
scaffold0132 (489-553)||(24675-24739)
scaffold0132 (401-449)||(24622-24670)
[»] scaffold0061 (3 HSPs)
scaffold0061 (489-553)||(49363-49427)
scaffold0061 (201-276)||(48895-48970)
scaffold0061 (433-481)||(49333-49381)
[»] scaffold0019 (1 HSPs)
scaffold0019 (489-553)||(30335-30399)
[»] scaffold0017 (3 HSPs)
scaffold0017 (489-553)||(149207-149271)
scaffold0017 (201-276)||(149664-149739)
scaffold0017 (433-481)||(149253-149301)
[»] scaffold0572 (1 HSPs)
scaffold0572 (490-564)||(10356-10430)
[»] scaffold0229 (1 HSPs)
scaffold0229 (490-564)||(10806-10880)
[»] scaffold0205 (1 HSPs)
scaffold0205 (489-571)||(30900-30982)
[»] scaffold0157 (1 HSPs)
scaffold0157 (490-564)||(31965-32039)
[»] scaffold0144 (1 HSPs)
scaffold0144 (490-564)||(7517-7591)
[»] scaffold0141 (1 HSPs)
scaffold0141 (490-564)||(13392-13466)
[»] scaffold0124 (1 HSPs)
scaffold0124 (490-564)||(21366-21440)
[»] scaffold0070 (6 HSPs)
scaffold0070 (489-571)||(59059-59141)
scaffold0070 (489-547)||(63285-63343)
scaffold0070 (392-470)||(59134-59213)
scaffold0070 (147-294)||(59472-59617)
scaffold0070 (392-470)||(63336-63415)
scaffold0070 (147-294)||(63674-63819)
[»] scaffold0034 (1 HSPs)
scaffold0034 (490-564)||(121206-121280)
[»] scaffold0015 (2 HSPs)
scaffold0015 (489-546)||(193646-193703)
scaffold0015 (489-543)||(187961-188014)
[»] scaffold1910 (1 HSPs)
scaffold1910 (489-553)||(517-581)
[»] scaffold0932 (1 HSPs)
scaffold0932 (491-571)||(1020-1100)
[»] scaffold0720 (2 HSPs)
scaffold0720 (481-544)||(5921-5985)
scaffold0720 (433-470)||(5900-5937)
[»] scaffold0478 (3 HSPs)
scaffold0478 (481-544)||(8247-8311)
scaffold0478 (433-470)||(8295-8332)
scaffold0478 (436-470)||(2917-2951)
[»] scaffold0060 (5 HSPs)
scaffold0060 (489-553)||(47352-47416)
scaffold0060 (489-553)||(52296-52360)
scaffold0060 (433-481)||(47322-47370)
scaffold0060 (147-326)||(51796-51979)
scaffold0060 (433-481)||(52266-52314)
[»] scaffold0240 (1 HSPs)
scaffold0240 (577-648)||(4550-4620)
[»] scaffold0452 (1 HSPs)
scaffold0452 (490-564)||(12348-12422)
[»] scaffold0431 (1 HSPs)
scaffold0431 (490-564)||(14857-14931)
[»] scaffold0415 (1 HSPs)
scaffold0415 (506-564)||(1128-1186)
[»] scaffold0020 (1 HSPs)
scaffold0020 (392-481)||(547-637)
[»] scaffold0044 (2 HSPs)
scaffold0044 (490-546)||(64818-64874)
scaffold0044 (490-546)||(81216-81272)
[»] scaffold0041 (3 HSPs)
scaffold0041 (147-326)||(34605-34788)
scaffold0041 (401-480)||(35020-35100)
scaffold0041 (489-553)||(35083-35147)
[»] scaffold0690 (1 HSPs)
scaffold0690 (580-643)||(5811-5874)
[»] scaffold0011 (3 HSPs)
scaffold0011 (505-564)||(127043-127102)
scaffold0011 (580-615)||(145871-145906)
scaffold0011 (401-470)||(127111-127180)
[»] scaffold0031 (1 HSPs)
scaffold0031 (490-564)||(35391-35465)
[»] scaffold0018 (1 HSPs)
scaffold0018 (490-564)||(21947-22021)
[»] scaffold0484 (1 HSPs)
scaffold0484 (221-293)||(7980-8051)
[»] scaffold0004 (1 HSPs)
scaffold0004 (489-553)||(199841-199905)
[»] scaffold0292 (1 HSPs)
scaffold0292 (505-564)||(7807-7866)
[»] scaffold0002 (1 HSPs)
scaffold0002 (581-615)||(4675-4709)
[»] scaffold0575 (1 HSPs)
scaffold0575 (505-562)||(5276-5333)
[»] scaffold0131 (1 HSPs)
scaffold0131 (147-192)||(8718-8763)


Alignment Details
Target: chr4 (Bit Score: 569; Significance: 0; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 569; E-Value: 0
Query Start/End: Original strand, 19 - 648
Target Start/End: Original strand, 26187577 - 26188206
Alignment:
Q  19 tttacaatcttcatgagcagtccacctattttgaaatttgatagatgaggggnnnnnnntgacctcagtaaatttgcatgttcaacatggttggatgata 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||    
T  26187577 tttacaatcttcatgagcagtccacctattttgaaatttgatagatgaggggaaaaaaatgacctcagtaaatttgcatgttcaacatggttggatgata 26187676  T
Q  119 gtcatgaatgagatttaggaagagtggatgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26187677 gtcatgaatgagatttaggaagagtggatgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgt 26187776  T
Q  219 ccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaatgggatgcataattaagtgaa 318  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||    
T  26187777 cagaattgaaaaatgtgaaattcccacatgagatggatcacacactagtagtatttatatagtggggttgtacctcaaatgggatgcataattaagtgaa 26187876  T
Q  319 cgaagtaaacacgaaaatgttaaattaagtaattaattgaatcatattatttgaaagtgtcatcttagtctctatatctttcgtactcaatatgatatat 418  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26187877 cgaagtaagcacgaaaatgttaaattaagtaattaattgaatcatattatttgaaagtgtcatcttagtctctatatctttcgtactcaatatgatatat 26187976  T
Q  419 cttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaattacttgttcctagagtttctcacatat 518  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26187977 cttggcactcgatcgagatatttttatactagatctaatatgtgaattatttactccaaaagtaatatgtaattacttgttcctaaagtttctcacatat 26188076  T
Q  519 tagttgtgaattttctctataaatagagaactcacgtagtgcattccagacacaagggttatattgagttgtcgagaactctttctctcttctccctcca 618  Q
    ||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26188077 tagttgtgaattaactatataaatagagaactcacgtagtgcattccagacacaagggttatattgagttgtcgagaactctttctctcttctccctcca 26188176  T
Q  619 gcttgtgttaacgtgctatttttcttctca 648  Q
    ||||||||||||||||||||||||||||||    
T  26188177 gcttgtgttaacgtgctatttttcttctca 26188206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 439 - 563
Target Start/End: Complemental strand, 55073912 - 55073787
Alignment:
Q  439 tttttatactagatctaatatgtgaattacttactccaaaagtaatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctcta 537  Q
    |||||| |||||||||||||||| ||||  ||| ||| ||| |||||||| |||| |||||| ||| |||||| || |||||||||||||||||||||||    
T  55073912 tttttaaactagatctaatatgttaattgattattcccaaactaatatgtgaattgcttgtttctaaagtttcacatatattagttgtgaattttctcta 55073813  T
Q  538 taaatagagaactcacgtagtgcatt 563  Q
    |||||||||| |||||||||| ||||    
T  55073812 taaatagagatctcacgtagttcatt 55073787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 392 - 648
Target Start/End: Original strand, 43477301 - 43477549
Alignment:
Q  392 atatctttcgtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagtaat-atgtaa 490  Q
    |||| ||| |||||||||||  ||||| |||| | || || ||||||||||| ||||||||||||| |  |||||||||| | | |||||||| |||||     
T  43477301 atatattttgtactcaatatagtatattttggtattcaattgagatatttttgtactagatctaatgttagaattacttaattctaaagtaatgatgta- 43477399  T
Q  491 ttacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac--aagggttatattgagtt 588  Q
    ||||  ||| | | ||||| |||| ||||| |||||||||||||||||||||||| ||||||  ||||||||| || ||||  ||| ||| |||||||||    
T  43477400 ttac--gtttccaaagtttatcacttattaattgtgaattttctctataaatagataactca--tagtgcatttcacacaccaaagagttctattgagtt 43477495  T
Q  589 gtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttcttctca 648  Q
    ||| || ||||||||||||||| ||      |||||||||||| |||||| |||||||||    
T  43477496 gtcaagtactctttctctcttcccc------cttgtgttaacgagctattattcttctca 43477549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 489 - 564
Target Start/End: Complemental strand, 15225880 - 15225805
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  |||||||||    
T  15225880 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacagagtgcattc 15225805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 146 - 281
Target Start/End: Original strand, 13520868 - 13521005
Alignment:
Q  146 atgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 245  Q
    |||||| |||||||||||||||||||||||||||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || | ||||    
T  13520868 atgttggaacatgtgtggaaattgagttaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagttccac 13520967  T
Q  246 atgagatgga--tcacacactagtggtgtttatatagt 281  Q
    ||  |||| |   |||||| |||| |||||||||||||    
T  13520968 atcggatgaaatacacacattagtagtgtttatatagt 13521005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 582 - 648
Target Start/End: Original strand, 15805093 - 15805159
Alignment:
Q  582 ttgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttcttctca 648  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| | |||| |||| ||||    
T  15805093 ttgagttgtcgagaactctttctctcttctccttccagcttgtgttaacgagatattcttctcctca 15805159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 489 - 553
Target Start/End: Complemental strand, 26034903 - 26034839
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  26034903 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcac 26034839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 580 - 627
Target Start/End: Complemental strand, 6943425 - 6943378
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgtt 627  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  6943425 tattgagttgtcgagaactctttcgctcttctccctccagcttgtgtt 6943378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 489 - 564
Target Start/End: Original strand, 14898995 - 14899070
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    ||||||||||||| | |||||||||  ||||||||||||| |||||||||||||||||| |||||  |||||||||    
T  14898995 aattacttgttcccaaagtttctcatttattagttgtgaagtttctctataaatagagagctcacacagtgcattc 14899070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 489 - 560
Target Start/End: Complemental strand, 34561139 - 34561068
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgc 560  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| ||||| ||||||    
T  34561139 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacatagtgc 34561068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 12488512 - 12488438
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  12488512 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 12488438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 47575361 - 47575295
Alignment:
Q  505 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    |||||||||| |||||||||||||||||||||||||| ||||| |||||  ||||||||||| ||||    
T  47575361 agtttctcacttattagttgtgaattttctctataaaaagagagctcacacagtgcattccacacac 47575295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 489 - 566
Target Start/End: Original strand, 13521364 - 13521441
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattcca 566  Q
    ||||||||| ||| | |||||||||| ||||||||||||| ||| |||||||||||||| |||||  |||||||||||    
T  13521364 aattacttgctcccaaagtttctcacttattagttgtgaactttatctataaatagagagctcacacagtgcattcca 13521441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 147 - 326
Target Start/End: Original strand, 3992653 - 3992836
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 246  Q
    ||||| ||||| || ||||||||||| ||  ||||  |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || |||||||    
T  3992653 tgttggaacatatgcggaaattgagt-aattgactaaacacaaattcccacaatgggtagaactagtgtggtgtgaattgaaaaaggtggaagtcccaca 3992751  T
Q  247 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-----gggatgcataattaagtgaacgaagtaa 326  Q
    |  ||||||||||||| |||| |||||||||||||| || |||||||| |||     ||| | |||||||| |||||||||||||    
T  3992752 tcggatggatcacacattagtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaa 3992836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 3997441 - 3997505
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  3997441 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcac 3997505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 7902490 - 7902554
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  7902490 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcac 7902554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 9185063 - 9185127
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||| ||||||||| |||||    
T  9185063 aattacttgttcccaaagtttctcacttattagttgtgaaatttctctacaaatagagagctcac 9185127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 9190928 - 9190992
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||| ||||||||| |||||    
T  9190928 aattacttgttcccaaagtttctcacttattagttgtgaaatttctctacaaatagagagctcac 9190992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 489 - 564
Target Start/End: Original strand, 14868447 - 14868522
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||| |||| | |||||||||  ||||||||||||| |||||||||||||||||| |||||  |||||||||    
T  14868447 aattacttcttcccaaagtttctcatttattagttgtgaagtttctctataaatagagagctcacacagtgcattc 14868522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 489 - 564
Target Start/End: Complemental strand, 14877487 - 14877412
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||| |||| | |||||||||  ||||||||||||| |||||||||||||||||| |||||  |||||||||    
T  14877487 aattacttcttcccaaagtttctcatttattagttgtgaagtttctctataaatagagagctcacacagtgcattc 14877412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 506 - 564
Target Start/End: Original strand, 14953451 - 14953509
Alignment:
Q  506 gtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  14953451 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 14953509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 31297890 - 31297956
Alignment:
Q  505 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    |||||||||| ||||||||||||| | |||||||||||||||| |||||  ||||||||||| ||||    
T  31297890 agtttctcacttattagttgtgaactctctctataaatagagagctcacacagtgcattccatacac 31297956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 508 - 558
Target Start/End: Complemental strand, 32545579 - 32545529
Alignment:
Q  508 ttctcacatattagttgtgaattttctctataaatagagaactcacgtagt 558  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| ||||    
T  32545579 ttctcacatattagttgcgaattttctctataaatagagagctcacatagt 32545529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 481
Target Start/End: Original strand, 13521301 - 13521382
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  13521301 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 13521382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 490 - 563
Target Start/End: Original strand, 15011196 - 15011269
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcatt 563  Q
    |||||||||| | | |||||||||| |||||||||| || | ||||||||||||||||||||||  ||||||||    
T  15011196 attacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcatt 15011269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 481
Target Start/End: Complemental strand, 41817573 - 41817492
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||||||||||| |||  |||||||  ||||| ||||| |||||||||||||||| ||||||||| |||| |||||    
T  41817573 gtactcaatatgatatattttgagactcgatttgagatgtttttgtactagatctaatatgagaattacttgctcccaaagt 41817492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 433 - 481
Target Start/End: Original strand, 7902460 - 7902508
Alignment:
Q  433 gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||||||||||||||||||||| ||||||||| |||| |||||    
T  7902460 gagatatttttatactagatctaatatgagaattacttgctcccaaagt 7902508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 147 - 282
Target Start/End: Original strand, 7899838 - 7899971
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 246  Q
    ||||| ||||| |||||||||||||| ||  ||||  |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || |||||||    
T  7899838 tgttggaacatatgtggaaattgagt-aattgactaaacacaaattcccacaatgggtagaactagtgtggtgtgaattgaaaaaagtggaagtcccaca 7899936  T
Q  247 tgagatggatcacacactagtggtgtttatatagtg 282  Q
    | | |||||||||||| |||| ||||||||||||||    
T  7899937 tca-atggatcacacattagtagtgtttatatagtg 7899971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 580 - 627
Target Start/End: Original strand, 13065254 - 13065301
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgtt 627  Q
    |||||||||||||| || ||||| ||||||||||||||||||||||||    
T  13065254 tattgagttgtcgaaaaatctttatctcttctccctccagcttgtgtt 13065301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 580 - 643
Target Start/End: Original strand, 30054513 - 30054576
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttct 643  Q
    |||| |||||| |||||| ||||||||||||||||| ||| ||||||||||| |||||| ||||    
T  30054513 tattaagttgttgagaacactttctctcttctcccttcagtttgtgttaacgagctattcttct 30054576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 580 - 627
Target Start/End: Original strand, 39216536 - 39216583
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgtt 627  Q
    ||||||| | || |||||||||||||||||||||||||||||||||||    
T  39216536 tattgaggtttctagaactctttctctcttctccctccagcttgtgtt 39216583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 507 - 566
Target Start/End: Original strand, 52742621 - 52742680
Alignment:
Q  507 tttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattcca 566  Q
    |||||| | |||||||||| ||||||||||||||||||||| ||||| |||| |||||||    
T  52742621 tttctcgcgtattagttgtcaattttctctataaatagagagctcacatagttcattcca 52742680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 10713654 - 10713580
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | ||||||||||  ||||||||| |||  ||||||||||||||||||||||  |||||||||    
T  10713654 attacttgtttccaaagtttctcactcattagttgtaaatcatctctataaatagagaactcacacagtgcattc 10713580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 10927424 - 10927350
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | ||||||||||  ||||||||| |||  ||||||||||||||||||||||  |||||||||    
T  10927424 attacttgtttccaaagtttctcactcattagttgtaaatcatctctataaatagagaactcacacagtgcattc 10927350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 564
Target Start/End: Complemental strand, 25690692 - 25690634
Alignment:
Q  506 gtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    ||||||||| |||||||| | |||| ||||||||||||||||||||||  |||||||||    
T  25690692 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattc 25690634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 581 - 615
Target Start/End: Original strand, 33462814 - 33462848
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||||||||||||||||||||||||||    
T  33462814 attgagttgtcgagaactctttctctcttctccct 33462848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 330
Target Start/End: Complemental strand, 39320768 - 39320591
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 246  Q
    ||||| ||||||||||||||||||||||||||| |  | |||||||| || || ||| |||| ||||       ||||||||||| ||| || | | |||    
T  39320768 tgttggaacatgtgtggaaattgagttaaaagattaaatacaaattcgcatgttgggtagaactagt-------gaattgaaaaaagtggaagttctaca 39320676  T
Q  247 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-gggatgcataattaagtgaacgaagtaaacac 330  Q
    |  ||| ||||||||| ||||  ||||||||||||| || |||||||| |||  ||   |||||||| |||||||||||||||||    
T  39320675 ttggatagatcacacattagtaatgtttatatagtgggggtgtacctctaatatgggcacataattatgtgaacgaagtaaacac 39320591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 326
Target Start/End: Complemental strand, 41817922 - 41817816
Alignment:
Q  221 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-gggatgcataattaagtgaac 319  Q
    ||||||||||| ||| || | ||||||  ||||||||||| | |||| |||||||||||||| || |||| ||| ||| ||| | |||||||| ||||||    
T  41817922 gaattgaaaaaagtggaagttccacatcggatggatcacatattagtagtgtttatatagtgggggtgtatctctaataggggtacataattatgtgaac 41817823  T
Q  320 gaagtaa 326  Q
    |||||||    
T  41817822 gaagtaa 41817816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 401 - 481
Target Start/End: Complemental strand, 34561202 - 34561121
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||| ||||||| ||||||||| |||| |||||    
T  34561202 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatttaatatgagaattacttgctcccaaagt 34561121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 449
Target Start/End: Original strand, 9185006 - 9185058
Alignment:
Q  397 tttcgtactcaatatgatatatcttggcactcgatcgagatatttttatacta 449  Q
    |||||||||||||||||||||| |||| |||| || ||||||||||| |||||    
T  9185006 tttcgtactcaatatgatatattttggtactcaattgagatatttttgtacta 9185058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 511 - 551
Target Start/End: Complemental strand, 15539612 - 15539572
Alignment:
Q  511 tcacatattagttgtgaattttctctataaatagagaactc 551  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  15539612 tcacatattggttgtgaattttctctgtaaatagagaactc 15539572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 471
Target Start/End: Original strand, 52742535 - 52742611
Alignment:
Q  396 ctttcgtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattactta 471  Q
    |||| ||||||||||||| |||| |||| |||| ||  || |||||||| |||||||||||||| ||||||||||||    
T  52742535 cttttgtactcaatatgacatattttggtactcaatttgatatatttttctactagatctaatacgtgaattactta 52742611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 547
Target Start/End: Original strand, 1150729 - 1150796
Alignment:
Q  481 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagaga 547  Q
    |||||||| ||| ||||||||| | ||| ||||||| | || ||||||||||||||||||||||||||    
T  1150729 taatatgtgaatcacttgttcccaaagtgtctcacaaagtacttgtgaattttctctataaatagaga 1150796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 580 - 619
Target Start/End: Complemental strand, 12875063 - 12875024
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccag 619  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  12875063 tattgagttgtcgagaaccctttctctcttctccatccag 12875024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 580 - 615
Target Start/End: Original strand, 42758305 - 42758340
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccct 615  Q
    ||||||||||||||||||||||||||||| ||||||    
T  42758305 tattgagttgtcgagaactctttctctctgctccct 42758340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Original strand, 8029792 - 8029826
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  8029792 attgagttgtcgggaactctttctctcttctccct 8029826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Complemental strand, 31269670 - 31269636
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  31269670 attgagttgtcgggaactctttctctcttctccct 31269636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 401 - 470
Target Start/End: Original strand, 31297810 - 31297880
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattactt 470  Q
    ||||||||| |||||||| |||  |||| ||  ||||||||||| |||||||||||||||| |||||||||    
T  31297810 gtactcaatgtgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattactt 31297880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Original strand, 33468453 - 33468487
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  33468453 attgagttgtcgggaactctttctctcttctccct 33468487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Original strand, 37259314 - 37259348
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  37259314 attgagttgtcgggaactctttctctcttctccct 37259348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 507 - 553
Target Start/End: Complemental strand, 39320259 - 39320213
Alignment:
Q  507 tttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    |||||||| ||||||||||||| |||| ||||||||||||| |||||    
T  39320259 tttctcacttattagttgtgaactttcactataaatagagagctcac 39320213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 580 - 648
Target Start/End: Original strand, 42316078 - 42316145
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagc-ttgtgttaacgtgctatttttcttctca 648  Q
    |||||||||||||||||  |||| ||||||||||||| ||| ||||||||||| |||||| |||| ||||    
T  42316078 tattgagttgtcgagaa--ctttttctcttctccctcaagctttgtgttaacgagctattcttctcctca 42316145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 294
Target Start/End: Complemental strand, 34561544 - 34561471
Alignment:
Q  221 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 294  Q
    ||||||||||| ||| || |||||| |  ||||||||||||| |||| || ||||||||||| || ||||||||    
T  34561544 gaattgaaaaaagtggaagtcccacgtcggatggatcacacattagtagtatttatatagtgggggtgtacctc 34561471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 476
Target Start/End: Complemental strand, 47575440 - 47575363
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatattttta-tactagatctaatatgtgaattacttactcca 476  Q
    |||||||||||||||||| |||  |||| ||  |||||||||||  ||||||||||||||| |||||||||| |||||    
T  47575440 gtactcaatatgatatattttgagactcaatttgagatattttttgtactagatctaatatatgaattacttgctcca 47575363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 580 - 624
Target Start/End: Complemental strand, 2820451 - 2820407
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgt 624  Q
    |||||||| |||||||||||||| |||||||||| |||| |||||    
T  2820451 tattgagtcgtcgagaactctttttctcttctccatccaacttgt 2820407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 481 - 532
Target Start/End: Complemental strand, 3309970 - 3309918
Alignment:
Q  481 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaatttt 532  Q
    |||||||| ||||||| |||||||  || ||||||||||||||||||||||||    
T  3309970 taatatgtgaattactagttcctaacgtctctcacatattagttgtgaatttt 3309918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 8660782 - 8660846
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||| ||||||| | ||||  |||| ||||||| ||||||||||||| |||||||||| |||||    
T  8660782 aattatttgttcccaaagttcttcacttattagtagtgaattttctctgtaaatagagagctcac 8660846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 449
Target Start/End: Original strand, 9190871 - 9190923
Alignment:
Q  397 tttcgtactcaatatgatatatcttggcactcgatcgagatatttttatacta 449  Q
    ||||||||||||||||||| || |||| |||| || ||||||||||| |||||    
T  9190871 tttcgtactcaatatgatacattttggtactcaattgagatatttttgtacta 9190923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 401 - 449
Target Start/End: Complemental strand, 15225933 - 15225885
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatacta 449  Q
    |||||||||||||||||| |||| |||| || ||||||||||| |||||    
T  15225933 gtactcaatatgatatattttggtactcaattgagatatttttgtacta 15225885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 587 - 643
Target Start/End: Complemental strand, 23093752 - 23093696
Alignment:
Q  587 ttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttct 643  Q
    |||||||||| ||||||||||||||| ||||||  |||||| ||| |||||| ||||    
T  23093752 ttgtcgagaattctttctctcttctctctccagtctgtgttgacgagctattcttct 23093696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 31297409 - 31297493
Alignment:
Q  148 gttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaa 231  Q
    |||| |||||| ||||||||||||| |||| | ||  ||||||||||||| || ||| |||| |||||||||  |||||||||||    
T  31297409 gttggaacatgcgtggaaattgagtaaaaaaggctaaacacaaattctcatgttgggtagaactagtgttgtgtgaattgaaaaa 31297493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 489 - 537
Target Start/End: Complemental strand, 41817510 - 41817462
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctcta 537  Q
    ||||||||| ||| | |||||||||| ||||||||||||| ||||||||    
T  41817510 aattacttgctcccaaagtttctcacttattagttgtgaactttctcta 41817462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 4e-52; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 402 - 629
Target Start/End: Original strand, 10532128 - 10532354
Alignment:
Q  402 tactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaattacttgttcc 501  Q
    ||||||| || |||||| |||| |||  || ||||||||||| ||||||||||||||||||||||||||| ||| |||||||| |   ||||  ||||||    
T  10532128 tactcaacataatatattttggtacttaattgagatatttttgtactagatctaatatgtgaattacttaatcccaaagtaatgt---attaagtgttcc 10532224  T
Q  502 tagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac--aagggttatattgagttgtcgagaactc 599  Q
     | |||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||  ||| |||  |||||||| | ||||||||    
T  10532225 caaagtttctcacttattagttgtgaattttctctataagtagagaattcacgtagtgcattccacacaccaaagagttcaattgagtttttgagaactc 10532324  T
Q  600 tttctctcttctccctccagcttgtgttaa 629  Q
    |||||||||||||||||| |||||||||||    
T  10532325 tttctctcttctccctccggcttgtgttaa 10532354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 402 - 631
Target Start/End: Original strand, 13343724 - 13343955
Alignment:
Q  402 tactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaattacttgttcc 501  Q
    ||||||| || |||||| |||| |||  || ||||||||||| ||||||||||||||||||||||||||| ||| |||||||| |   |||| |||||||    
T  13343724 tactcaacataatatattttggtacttaattgagatatttttgtactagatctaatatgtgaattacttattcccaaagtaatgt---attaattgttcc 13343820  T
Q  502 tagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac--aagggttatattgagttgtcgagaactc 599  Q
     | |||||||| | ||||||||||||||||||||||||||||| ||||||| ||| ||||||||| ||||  ||| |||  ||||||| |||||||| ||    
T  13343821 caaagtttctctcttattagttgtgaattttctctataaatagtgaactcaggtaatgcattccacacaccaaagagttcaattgagtggtcgagaattc 13343920  T
Q  600 tttc---tctcttctccctccagcttgtgttaacg 631  Q
    || |   |||||||||||||| || ||||||||||    
T  13343921 ttactgatctcttctccctccggcctgtgttaacg 13343955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 481 - 643
Target Start/End: Complemental strand, 9008881 - 9008716
Alignment:
Q  481 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac--aagggt 577  Q
    |||||||| ||||| ||||||| | |||||||||| |||||||||||||||||||||||||||||||| ||| | ||| |||||||| ||||  ||| ||    
T  9008881 taatatgtgaattatttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagctctcatagcgcattccacacaccaaagagt 9008782  T
Q  578 tatattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttct 643  Q
    | |||| |||||||||||||||||||  ||||||||||||||| |||||||||| |||||| ||||    
T  9008781 tctatttagttgtcgagaactctttccttcttctccctccagcctgtgttaacgagctattcttct 9008716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 505 - 648
Target Start/End: Original strand, 10499499 - 10499644
Alignment:
Q  505 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac--aagggttatattgagttgtcgagaactcttt 602  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||  ||| |||  |||||||||| || ||||||||    
T  10499499 agtttctcacttattagttgtgaattttctctataaatagagaactctggtagtgcattccacacaccaaagagttcaattgagttgttgataactcttt 10499598  T
Q  603 ctctcttctccctccagcttgtgttaacgtgctatttttcttctca 648  Q
     |||||||||| ||||||||||||||||| | |||| |||| ||||    
T  10499599 atctcttctccttccagcttgtgttaacgagttattcttctcctca 10499644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 505 - 648
Target Start/End: Original strand, 10504528 - 10504673
Alignment:
Q  505 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac--aagggttatattgagttgtcgagaactcttt 602  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||  ||| |||  |||||||||| || ||||||||    
T  10504528 agtttctcacttattagttgtgaattttctctataaatagagaactctggtagtgcattccacacaccaaagagttcaattgagttgttgataactcttt 10504627  T
Q  603 ctctcttctccctccagcttgtgttaacgtgctatttttcttctca 648  Q
     |||||||||| ||||||||||||||||| | |||| |||| ||||    
T  10504628 atctcttctccttccagcttgtgttaacgagttattcttctcctca 10504673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 580 - 648
Target Start/End: Original strand, 10392545 - 10392613
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttcttctca 648  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||| ||||    
T  10392545 tattgagttgtctagaactctttctctcttctccctccagcttgtgttgacgagctattcttctcctca 10392613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 580 - 648
Target Start/End: Original strand, 26286594 - 26286662
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttcttctca 648  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||| |||| ||||    
T  26286594 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttgacgagttattcttctcctca 26286662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 146 - 281
Target Start/End: Original strand, 9649843 - 9649980
Alignment:
Q  146 atgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 245  Q
    |||||| |||||||||||||||||||||||||||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || | ||||    
T  9649843 atgttggaacatgtgtggaaattgagttaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagttccac 9649942  T
Q  246 atgagatgga--tcacacactagtggtgtttatatagt 281  Q
    ||  |||| |   |||||| |||| |||||||||||||    
T  9649943 atcggatgaaatacacacattagtagtgtttatatagt 9649980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 146 - 326
Target Start/End: Complemental strand, 27257430 - 27257246
Alignment:
Q  146 atgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 245  Q
    |||||| ||||| |||||||||||||| ||  ||||  |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || ||||||    
T  27257430 atgttggaacatatgtggaaattgagt-aattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 27257332  T
Q  246 atgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-----gggatgcataattaagtgaacgaagtaa 326  Q
    || |||||||||||||| |||| |||||||||||||| || |||| ||| |||     ||| | |||||||| |||||||||||||    
T  27257331 atcagatggatcacacattagtagtgtttatatagtgggggtgtatctctaattaatgggggtacataattatgtgaacgaagtaa 27257246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 8954646 - 8954710
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  8954646 aattacttgttcccaaagtttctcacttattagttgtgaagtttctctataaatagagagctcac 8954710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 580 - 627
Target Start/End: Complemental strand, 3285145 - 3285098
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgtt 627  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3285145 tattgagttgtggagaactctttctctcttctccctccagcttgtgtt 3285098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 580 - 627
Target Start/End: Original strand, 10387807 - 10387854
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgtt 627  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  10387807 tattgagttgtcgataactctttctctcttctccctccagcttgtgtt 10387854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 10531748 - 10531831
Alignment:
Q  148 gttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaa 231  Q
    |||||||| |||||| ||||||| ||||||||||  ||||||||| |||||||||| |||| |||| |||| ||||||||||||    
T  10531748 gttgaaacttgtgtgaaaattgaattaaaagactaaacacaaattttcacgtagggtagaactagttttgtgcgaattgaaaaa 10531831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 489 - 560
Target Start/End: Complemental strand, 27256952 - 27256881
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgc 560  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| ||||| ||||||    
T  27256952 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacatagtgc 27256881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 547
Target Start/End: Original strand, 845987 - 846045
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagaga 547  Q
    ||||||||||||| | |||||||||| ||||||||||||| ||||||||||||||||||    
T  845987 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagaga 846045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 547
Target Start/End: Original strand, 853364 - 853422
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagaga 547  Q
    ||||||||||||| | |||||||||| ||||||||||||| ||||||||||||||||||    
T  853364 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagaga 853422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 547
Target Start/End: Original strand, 1211368 - 1211426
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagaga 547  Q
    ||||||||||||| | |||||||||| ||||||||||||| ||||||||||||||||||    
T  1211368 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagaga 1211426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 571
Target Start/End: Complemental strand, 8076765 - 8076683
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||||| ||| | |||||||||| |||||| |||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  8076765 aattacttgctcccaaagtttctcacttattagatgtgaactttctctataaatagagagctcacacagtgcattccacacac 8076683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 481 - 546
Target Start/End: Complemental strand, 15566099 - 15566033
Alignment:
Q  481 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 546  Q
    |||||||| ||||||||||||| | ||||||||||||||||||||||| |||||| |||||||||||    
T  15566099 taatatgtgaattacttgttccaaaagtttctcacatattagttgtgagttttctatataaatagag 15566033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 18426641 - 18426567
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  18426641 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 18426567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 489 - 566
Target Start/End: Original strand, 9650339 - 9650416
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattcca 566  Q
    ||||||||| ||| | |||||||||| ||||||||||||| ||| |||||||||||||| |||||  |||||||||||    
T  9650339 aattacttgctcccaaagtttctcacttattagttgtgaactttatctataaatagagagctcacacagtgcattcca 9650416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 838811 - 838875
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||||| | |||||||||| ||||||||| ||| |||||||||||||||||| |||||    
T  838811 aattacttgttcccaaagtttctcacctattagttgcgaaatttctctataaatagagagctcac 838875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 1203991 - 1204055
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||||| | |||||||||| ||||||||| ||| |||||||||||||||||| |||||    
T  1203991 aattacttgttcccaaagtttctcacctattagttgcgaaatttctctataaatagagagctcac 1204055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 544
Target Start/End: Complemental strand, 11297477 - 11297413
Alignment:
Q  481 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatag 544  Q
    |||||||| ||||||||||||  | ||||||||||||||||||||||| ||||||||||||||||    
T  11297477 taatatgtgaattacttgttcacaaagtttctcacatattagttgtgatttttctctataaatag 11297413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 13343311 - 13343395
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaa 231  Q
    ||||| |||||||||||||||||| |||||||||   ||||||||| |||||| ||| |||| |||||||||  |||||||||||    
T  13343311 tgttggaacatgtgtggaaattgaattaaaagacaaaacacaaattttcacgttgggtagaactagtgttgtgtgaattgaaaaa 13343395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 553
Target Start/End: Complemental strand, 19096970 - 19096906
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||||  | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  19096970 aattacttgttcgcaaagtttctcacctattagttgtgaaatttctctataaatagagagctcac 19096906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 156 - 294
Target Start/End: Complemental strand, 23866924 - 23866787
Alignment:
Q  156 atgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattga-aaaatgtgaaattcccacatgagatgg 254  Q
    ||||||| ||||||||||||||||||  |||||||||| || || ||| |||| |||||||||  ||||||| |||| ||| || ||||||||  |||||    
T  23866924 atgtgtgaaaattgagttaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaaagtggaagtcccacattggatgg 23866825  T
Q  255 atcacacactagtggtgtttatatagtgaggttgtacctc 294  Q
    |  ||||| |||| ||||||||||| || || ||||||||    
T  23866824 a--acacattagtagtgtttatataatgggggtgtacctc 23866787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 507 - 566
Target Start/End: Complemental strand, 2629353 - 2629294
Alignment:
Q  507 tttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattcca 566  Q
    ||||||||||||||||||| ||||||||||||||||| ||| ||||| |||| |||||||    
T  2629353 tttctcacatattagttgtaaattttctctataaatatagagctcacatagttcattcca 2629294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 433 - 499
Target Start/End: Complemental strand, 7838828 - 7838761
Alignment:
Q  433 gagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgt-aattacttgtt 499  Q
    ||||||||||| ||||||||||||||| ||||||||||  ||| |||||||||||| |||||||||||    
T  7838828 gagatatttttgtactagatctaatatttgaattacttgttcccaaagtaatatgtgaattacttgtt 7838761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 294
Target Start/End: Original strand, 10499011 - 10499158
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 246  Q
    ||||| |||||||||||||||||| ||||||||||  ||| |||||   ||||| || |||| |||||||||  ||||||||||| ||| || ||||  |    
T  10499011 tgttggaacatgtgtggaaattgaattaaaagactaaacataaatttcaacgtaaggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccgaa 10499110  T
Q  247 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 294  Q
    |  |||||| |||||| ||||  |||||||||| | ||| ||||||||    
T  10499111 ttggatggaacacacattagtattgtttatataattagggtgtacctc 10499158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 294
Target Start/End: Original strand, 10504040 - 10504187
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 246  Q
    ||||| |||||||||||||||||| ||||||||||  ||| |||||   ||||| || |||| |||||||||  ||||||||||| ||| || ||||  |    
T  10504040 tgttggaacatgtgtggaaattgaattaaaagactaaacataaatttcaacgtaaggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccgaa 10504139  T
Q  247 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 294  Q
    |  |||||| |||||| ||||  |||||||||| | ||| ||||||||    
T  10504140 ttggatggaacacacattagtattgtttatataattagggtgtacctc 10504187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 490 - 553
Target Start/End: Original strand, 45169311 - 45169374
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||    
T  45169311 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcac 45169374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 433 - 492
Target Start/End: Original strand, 47552628 - 47552687
Alignment:
Q  433 gagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaatt 492  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| ||||||| || |||||    
T  47552628 gagatatttttgtactaaatctaatatgtgaattacttactcccaaagtaacatataatt 47552687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 543
Target Start/End: Complemental strand, 1043934 - 1043880
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaata 543  Q
    ||||||||||| | | |||||||||||||||| ||||||||||||||||||||||    
T  1043934 aattacttgtttccaaagtttctcacatattaattgtgaattttctctataaata 1043880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 401 - 467
Target Start/End: Original strand, 11017399 - 11017465
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaatta 467  Q
    ||||||||||| |||||| || | |||| || |||||||||||| ||||||||||||||||||||||    
T  11017399 gtactcaatataatatattttagtactcaattgagatatttttacactagatctaatatgtgaatta 11017465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 14259720 - 14259646
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| || | ||||||||||||||||||||||  |||||||||    
T  14259720 attacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattc 14259646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 20488662 - 20488588
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| || | ||||||||||||||||||||||  |||||||||    
T  20488662 attacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattc 20488588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 481
Target Start/End: Original strand, 9650276 - 9650357
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  9650276 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 9650357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 454 - 538
Target Start/End: Complemental strand, 13337470 - 13337388
Alignment:
Q  454 taatatgtgaattacttactccaaaagtaatatgtaattacttgttcctagagtttctcacatattagttgtgaattttctctat 538  Q
    |||||||||||||||||  ||| ||| ||||||  ||||||| ||||  | ||||||||||||||||||||| ||||||||||||    
T  13337470 taatatgtgaattacttgttcccaaattaatat--aattactagttctaaaagtttctcacatattagttgtaaattttctctat 13337388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 546
Target Start/End: Complemental strand, 19641014 - 19640957
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 546  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||    
T  19641014 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 19640957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 481
Target Start/End: Complemental strand, 27257015 - 27256934
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  27257015 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 27256934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 648
Target Start/End: Complemental strand, 3046215 - 3046147
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttcttctca 648  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||| | |  ||||| |||||||||    
T  3046215 tattgagttggcgataactctttctctcttctcccttcagcttgtgttgatgaactattcttcttctca 3046147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 36477669 - 36477621
Alignment:
Q  505 agtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  36477669 agtttctcacctattagttgtgaaatttctctataaatagagagctcac 36477621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 40864742 - 40864806
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||| ||| | |||| ||||| ||||||||||||| |||||||||||||||||| |||||    
T  40864742 aattacttgctcccaaagttactcacttattagttgtgaactttctctataaatagagagctcac 40864806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 505 - 564
Target Start/End: Complemental strand, 20485286 - 20485227
Alignment:
Q  505 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| |||||||||| || | ||||||||||||||||||||||  |||||||||    
T  20485286 agtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattc 20485227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 580 - 627
Target Start/End: Complemental strand, 21671839 - 21671792
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgtt 627  Q
    ||||||||||  ||||||| ||||||||||||||||||||||||||||    
T  21671839 tattgagttgctgagaactttttctctcttctccctccagcttgtgtt 21671792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 581 - 615
Target Start/End: Complemental strand, 8268941 - 8268907
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||||||||||||||||||||||||||    
T  8268941 attgagttgtcgagaactctttctctcttctccct 8268907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 470
Target Start/End: Original strand, 10488613 - 10488683
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattactt 470  Q
    |||||||||||||||||| |||| |||| ||  ||||||||||| ||||| |||||||||||| |||||||    
T  10488613 gtactcaatatgatatattttggtactcaatttgagatatttttctactaaatctaatatgtgcattactt 10488683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 505 - 547
Target Start/End: Original strand, 11017476 - 11017518
Alignment:
Q  505 agtttctcacatattagttgtgaattttctctataaatagaga 547  Q
    |||||||||| ||||||||||||||||||| ||||||||||||    
T  11017476 agtttctcacttattagttgtgaattttctatataaatagaga 11017518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 490 - 564
Target Start/End: Original strand, 16459761 - 16459835
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| || | || |||||||||||||||||||  |||||||||    
T  16459761 attacttgtttccaaagtttctcacttattagttgtaaactatccctataaatagagaactcacacagtgcattc 16459835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 489 - 547
Target Start/End: Complemental strand, 18385203 - 18385145
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagaga 547  Q
    ||||||||||||| | |||||||||| ||| | ||||||| ||||||||||||||||||    
T  18385203 aattacttgttccaaaagtttctcacgtatcaattgtgaactttctctataaatagaga 18385145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 538
Target Start/End: Complemental strand, 13345375 - 13345293
Alignment:
Q  454 taatatgtgaattacttactccaaaagtaatatgtaattacttgttcctagagtttctcacatattagttgtgaattttctctat 538  Q
    |||||||||||||||||  ||| ||| ||||||  ||||||| |||   | ||||||||||||||||||||| ||||||||||||    
T  13345375 taatatgtgaattacttgttcccaaattaatat--aattactagttgtcaaagtttctcacatattagttgtaaattttctctat 13345293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 586 - 631
Target Start/End: Complemental strand, 15973392 - 15973347
Alignment:
Q  586 gttgtcgagaactctttctctcttctccctccagcttgtgttaacg 631  Q
    ||||||||||||||||||| |||||||||| || ||||||||||||    
T  15973392 gttgtcgagaactctttctatcttctcccttcaacttgtgttaacg 15973347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 517 - 553
Target Start/End: Original strand, 29727211 - 29727247
Alignment:
Q  517 attagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||||||||||||||||||||||| |||||    
T  29727211 attagttgtgaattttctctataaatagagagctcac 29727247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 481
Target Start/End: Complemental strand, 15565686 - 15565611
Alignment:
Q  407 aatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||||| |||| |||| ||  ||||||||||| |||||||| | ||||||||||| |||| |||||||||    
T  15565686 aatatgatatattttggtactcaatttgagatatttttgtactagatttcatatgtgaatttcttattccaaaagt 15565611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 432 - 470
Target Start/End: Complemental strand, 1043965 - 1043927
Alignment:
Q  432 cgagatatttttatactagatctaatatgtgaattactt 470  Q
    |||||||||||| |||||||||||||| |||||||||||    
T  1043965 cgagatatttttgtactagatctaatacgtgaattactt 1043927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Complemental strand, 4930867 - 4930833
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  4930867 attgagttgtcgggaactctttctctcttctccct 4930833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 401 - 481
Target Start/End: Complemental strand, 8076829 - 8076747
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatattttta-tactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||||||||||| |||  |||| ||  |||||||||||  ||||||||||||||| |||||||||| |||| |||||    
T  8076829 gtactcaatatgatatattttgaaactcaatttgagatattttttgtactagatctaatatatgaattacttgctcccaaagt 8076747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 402 - 468
Target Start/End: Original strand, 10499415 - 10499481
Alignment:
Q  402 tactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattac 468  Q
    ||||||| || |||||| |||| |||  || ||||||||||| ||||| ||||||||||||||||||    
T  10499415 tactcaacataatatattttggtacttaattgagatatttttgtactaaatctaatatgtgaattac 10499481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 402 - 468
Target Start/End: Original strand, 10504444 - 10504510
Alignment:
Q  402 tactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattac 468  Q
    ||||||| || |||||| |||| |||  || ||||||||||| ||||| ||||||||||||||||||    
T  10504444 tactcaacataatatattttggtacttaattgagatatttttgtactaaatctaatatgtgaattac 10504510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 436 - 470
Target Start/End: Complemental strand, 11297495 - 11297461
Alignment:
Q  436 atatttttatactagatctaatatgtgaattactt 470  Q
    |||||||| ||||||||||||||||||||||||||    
T  11297495 atatttttgtactagatctaatatgtgaattactt 11297461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 13346253 - 13346331
Alignment:
Q  153 aacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaa 231  Q
    |||||||||||||||||| |||||||||   ||| ||||| ||||||  || |||| |||||||||  |||||||||||    
T  13346253 aacatgtgtggaaattgaattaaaagacaaaacataaattttcacgtttggtagaactagtgttgtgtgaattgaaaaa 13346331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 490 - 564
Target Start/End: Original strand, 14928016 - 14928090
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| ||   ||||||||||||||| ||||||  |||||||||    
T  14928016 attacttgtttccaaagtttctcacttattagttgtaaaccatctctataaatagaggactcacacagtgcattc 14928090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 490 - 564
Target Start/End: Original strand, 15351482 - 15351556
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| ||   ||||||||||||||| ||||||  |||||||||    
T  15351482 attacttgtttccaaagtttctcacttattagttgtaaaccatctctataaatagaggactcacacagtgcattc 15351556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Complemental strand, 27238796 - 27238762
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  27238796 attgagttgtcgggaactctttctctcttctccct 27238762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 404 - 481
Target Start/End: Original strand, 40864682 - 40864760
Alignment:
Q  404 ctcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    ||||||||||||||| |||  |||| ||  ||||||||||| ||||| |||||||||| ||||||||| |||| |||||    
T  40864682 ctcaatatgatatattttgagactcaatttgagatatttttgtactaaatctaatatgagaattacttgctcccaaagt 40864760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Original strand, 42626038 - 42626072
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  42626038 attgagttgtcgggaactctttctctcttctccct 42626072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 263
Target Start/End: Complemental strand, 1044462 - 1044346
Alignment:
Q  149 ttgaaacatgtgtggaaatt--gagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 246  Q
    ||||||||||||||||||||  |||||||||||||  ||||||  |||||| | |   |||| |||||| ||  ||||||||||| |||||| ||| |||    
T  1044462 ttgaaacatgtgtggaaattgagagttaaaagactaaacacaatgtctcacattgtctagaactagtgtggtgtgaattgaaaaaagtgaaagtcctaca 1044363  T
Q  247 tgagatggatcacacac 263  Q
    |  ||| ||||||||||    
T  1044362 ttggatagatcacacac 1044346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 577 - 610
Target Start/End: Original strand, 6590469 - 6590502
Alignment:
Q  577 ttatattgagttgtcgagaactctttctctcttc 610  Q
    |||||||||||||||||||||||||| |||||||    
T  6590469 ttatattgagttgtcgagaactctttgtctcttc 6590502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 13338017 - 13337984
Alignment:
Q  505 agtttctcacatattagttgtgaattttctctat 538  Q
    ||||||||||||||||||||| ||||||||||||    
T  13338017 agtttctcacatattagttgtaaattttctctat 13337984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 470
Target Start/End: Original strand, 14927953 - 14928022
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 470  Q
    ||||| ||||| |||||| |||| |||| || ||||||||||  |||||||||||||| ||| |||||||    
T  14927953 gtacttaatataatatattttggtactcaattgagatattttagtactagatctaataggtgcattactt 14928022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 470
Target Start/End: Original strand, 15351419 - 15351488
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 470  Q
    ||||| ||||| |||||| |||| |||| || ||||||||||  |||||||||||||| ||| |||||||    
T  15351419 gtacttaatataatatattttggtactcaattgagatattttagtactagatctaataggtgcattactt 15351488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 470
Target Start/End: Original strand, 29727117 - 29727186
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 470  Q
    ||||||||||| |||||| |||| |||| || || |||||||| ||||| | ||||||||||| ||||||    
T  29727117 gtactcaatataatatattttggtactcaattgaaatatttttgtactatacctaatatgtgagttactt 29727186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 583 - 615
Target Start/End: Complemental strand, 4580145 - 4580113
Alignment:
Q  583 tgagttgtcgagaactctttctctcttctccct 615  Q
    ||||||||| |||||||||||||||||||||||    
T  4580145 tgagttgtcaagaactctttctctcttctccct 4580113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 603 - 643
Target Start/End: Original strand, 13343994 - 13344034
Alignment:
Q  603 ctctcttctccctccagcttgtgttaacgtgctatttttct 643  Q
    ||||||||||||||||||||||||||| | |||||| ||||    
T  13343994 ctctcttctccctccagcttgtgttaaagagctattcttct 13344034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 4e-49; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 401 - 631
Target Start/End: Original strand, 35456234 - 35456462
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaattacttgttc 500  Q
    |||||||| || |||||| |||| ||||  | ||||  ||||| ||| ||||||||||||||||||||||| ||  |||||||| |   |||||||||||    
T  35456234 gtactcaacataatatattttggtactcagttgagaagtttttgtacaagatctaatatgtgaattacttaatctcaaagtaatgt---attacttgttc 35456330  T
Q  501 ctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac--aagggttatattgagttgtcgagaact 598  Q
    | | |||||||| | ||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||  ||  ||| |||||||||||||| ||||    
T  35456331 ccaaagtttctc-cttattagttgtgaattttctctataaatagagaattcacatagtgcattccacacaccaaatagttttattgagttgtcgataact 35456429  T
Q  599 ctttctctcttctccctccagcttgtgttaacg 631  Q
    |||||||||||||||||||||||||||||||||    
T  35456430 ctttctctcttctccctccagcttgtgttaacg 35456462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 433 - 545
Target Start/End: Original strand, 47540841 - 47540954
Alignment:
Q  433 gagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgt-aattacttgttcctagagtttctcacatattagttgtgaattt 531  Q
    ||||||||||| ||||||||||||||||| ||||||||| ||  |||||||||| | ||||||||||||| | |||||||||||||||||||||||||||    
T  47540841 gagatatttttgtactagatctaatatgtaaattacttagtctcaaagtaatattttaattacttgttcccaaagtttctcacatattagttgtgaattt 47540940  T
Q  532 tctctataaataga 545  Q
    ||||||||||||||    
T  47540941 tctctataaataga 47540954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 401 - 564
Target Start/End: Original strand, 11997301 - 11997460
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaattacttgttc 500  Q
    |||||||||||||||||| || | || | || ||||||||||| ||| |||||||| |||||||||| ||| ||  ||| |||  |   |||||||||||    
T  11997301 gtactcaatatgatatattttcgtacacaattgagatatttttgtacaagatctaacatgtgaattaattaatctcaaaataaagt---attacttgttc 11997397  T
Q  501 ctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    | | ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  11997398 ccaaagtttctca-atattagttgtgaattttctctataaatagagagctcacgtagtacattc 11997460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 147 - 294
Target Start/End: Complemental strand, 8889128 - 8888978
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 245  Q
    ||||| |||||||||||||| |||||||||| ||||  |||||||||| || || ||| ||||||||||||||  ||||||||||| ||| || ||||||    
T  8889128 tgttggaacatgtgtggaaactgagttaaaaagactaaacacaaattcccatgttgggtagaattagtgttgtgtgaattgaaaaaagtggaagtcccac 8889029  T
Q  246 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 294  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  8889028 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 8888978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 433 - 531
Target Start/End: Original strand, 47541257 - 47541356
Alignment:
Q  433 gagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgt-aattacttgttcctagagtttctcacatattagttgtgaattt 531  Q
    ||||||||||| |||||||| |||| ||||||||||||| ||| |||||||||| | ||||||||||||| | ||||| |||||||||||||||||||||    
T  47541257 gagatatttttgtactagatataatttgtgaattacttaatcctaaagtaatatttaaattacttgttcccaaagtttttcacatattagttgtgaattt 47541356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 147 - 294
Target Start/End: Complemental strand, 8070888 - 8070741
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 245  Q
    ||||| ||||||||||||||||||||||||| ||||  |||||||||| || || ||| |||| |||||||||  |||||||||||  || || ||||||    
T  8070888 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaa-tggaagtcccac 8070790  T
Q  246 atgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 294  Q
    ||  |||||| |||||| |||| |||||||||||||| || ||||||||    
T  8070789 atcggatggaacacacattagtagtgtttatatagtgggggtgtacctc 8070741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 147 - 294
Target Start/End: Complemental strand, 3673777 - 3673628
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaa-agactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 245  Q
    ||||| |||||||||||||||||||||||| |||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  3673777 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccac 3673679  T
Q  246 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 294  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  3673678 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 3673628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 147 - 294
Target Start/End: Complemental strand, 3693831 - 3693682
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaa-agactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 245  Q
    ||||| |||||||||||||||||||||||| |||||  ||||||||||||| || ||| |||| || ||||||  ||||||||||| ||| || ||||||    
T  3693831 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattctcatgttgggtagaactaatgttgtgtgaattgaaaaa-gtggaagtcccac 3693733  T
Q  246 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 294  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  3693732 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 3693682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 489 - 571
Target Start/End: Complemental strand, 8070394 - 8070312
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||||||||    
T  8070394 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccagacac 8070312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 147 - 294
Target Start/End: Complemental strand, 3034855 - 3034706
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaa-agactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 245  Q
    ||||| |||||||||||||||||||||||| |||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  3034855 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccac 3034757  T
Q  246 atgagatgga--tcacacactagtggtgtttatatagtgaggttgtacctc 294  Q
    ||  ||||||   |||||| |||| |||||||||||||| || ||||||||    
T  3034756 atcggatggaatacacacattagtagtgtttatatagtgggggtgtacctc 3034706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 481 - 563
Target Start/End: Original strand, 6595763 - 6595846
Alignment:
Q  481 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcatt 563  Q
    |||||||| ||||||||||||| | ||||| |||| |||||||||||||||||||||||||||||||| |||||  ||||||||    
T  6595763 taatatgtgaattacttgttcccaaagtttttcacttattagttgtgaattttctctataaatagagagctcacagagtgcatt 6595846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 147 - 294
Target Start/End: Complemental strand, 8884382 - 8884232
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 245  Q
    ||||| |||||||||||||| |||||||||| ||||  |||||||||| || || ||| |||| |||||||||  |||||||||||  || || ||||||    
T  8884382 tgttggaacatgtgtggaaactgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaaatggaagtcccac 8884283  T
Q  246 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 294  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  8884282 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 8884232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 584 - 647
Target Start/End: Complemental strand, 11400003 - 11399940
Alignment:
Q  584 gagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttcttctc 647  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| ||||||||    
T  11400003 gagttgtcgagaactctttctctcttctccctccagcttgagttgacgagctattcttcttctc 11399940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 489 - 571
Target Start/End: Complemental strand, 3034358 - 3034276
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  3034358 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacac 3034276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 489 - 571
Target Start/End: Complemental strand, 3673301 - 3673219
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  3673301 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacac 3673219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 489 - 571
Target Start/End: Complemental strand, 3693333 - 3693251
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  3693333 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacac 3693251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 489 - 571
Target Start/End: Complemental strand, 8888645 - 8888563
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  8888645 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacac 8888563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 481 - 545
Target Start/End: Complemental strand, 16023256 - 16023191
Alignment:
Q  481 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaataga 545  Q
    |||||||| ||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||    
T  16023256 taatatgtgaattacttgttcccaaagtttgtcacatattagttgtgaattttctctataaataga 16023191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 587 - 631
Target Start/End: Complemental strand, 28125745 - 28125701
Alignment:
Q  587 ttgtcgagaactctttctctcttctccctccagcttgtgttaacg 631  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  28125745 ttgtcgagaactctttctctcttctccctccagcttgtgttaacg 28125701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 564
Target Start/End: Original strand, 9706971 - 9707045
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  9706971 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 9707045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 12899113 - 12899203
Alignment:
Q  481 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagaca 570  Q
    |||||||| ||||||||||||| | |||||||||| |||||| |||||||||||||||||||||  ||  |||| |||||||||| |||||    
T  12899113 taatatgtgaattacttgttcccaaagtttctcacttattagctgtgaattttctctataaataatgagatcacatagtgcattctagaca 12899203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 564
Target Start/End: Original strand, 16749300 - 16749374
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  16749300 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 16749374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 19776599 - 19776525
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  19776599 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 19776525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 445 - 543
Target Start/End: Original strand, 47540466 - 47540562
Alignment:
Q  445 tactagatctaatatgtgaattacttactccaaaagtaatatgtaattacttgttcctagagtttctcacatattagttgtgaattttctctataaata 543  Q
    ||||||||| ||||||| ||||||||| ||| |||||| | || | |||| |||| ||| ||||||||||||||||||||||||||||||||| |||||    
T  47540466 tactagatcaaatatgtaaattacttaatcccaaagtatt-tg-atttacctgtttctaaagtttctcacatattagttgtgaattttctctaaaaata 47540562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 489 - 546
Target Start/End: Complemental strand, 8197167 - 8197110
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 546  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||    
T  8197167 aattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagag 8197110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 489 - 546
Target Start/End: Complemental strand, 8223650 - 8223593
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 546  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||    
T  8223650 aattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagag 8223593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 10585569 - 10585633
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  10585569 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcac 10585633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 580 - 648
Target Start/End: Original strand, 10708153 - 10708221
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttcttctca 648  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||| || |||  ||||| |||||||||    
T  10708153 tattgagttgtagagaactctttctctcttctccctccatcttgtcttgacgaactattcttcttctca 10708221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 391 - 481
Target Start/End: Complemental strand, 3673374 - 3673283
Alignment:
Q  391 tatatctttcgtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    ||||| ||| |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  3673374 tatattttttgtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 3673283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 391 - 481
Target Start/End: Complemental strand, 3693406 - 3693315
Alignment:
Q  391 tatatctttcgtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    ||||| ||| |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  3693406 tatattttttgtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 3693315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 490 - 553
Target Start/End: Original strand, 37438940 - 37439003
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||    
T  37438940 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcac 37439003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 571
Target Start/End: Complemental strand, 8883885 - 8883803
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||| ||| || ||  ||||||||||| ||||    
T  8883885 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaataaagagcttacacagtgcattccacacac 8883803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 546
Target Start/End: Complemental strand, 29943 - 29886
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 546  Q
    ||||||||||||| | |||||||||| ||||||||||||| ||| |||||||||||||    
T  29943 aattacttgttcccaaagtttctcacctattagttgtgaaatttttctataaatagag 29886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 481
Target Start/End: Complemental strand, 3034421 - 3034340
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  3034421 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 3034340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 470
Target Start/End: Original strand, 6595710 - 6595779
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 470  Q
    ||||||||||| |||||| || | |||| ||  |||||||||| ||||||||||||||||||||||||||    
T  6595710 gtactcaatataatatatttttgtactcaattaagatatttttgtactagatctaatatgtgaattactt 6595779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 481
Target Start/End: Complemental strand, 8070457 - 8070376
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  8070457 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 8070376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 481
Target Start/End: Complemental strand, 8883948 - 8883867
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  8883948 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 8883867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 481
Target Start/End: Complemental strand, 8888708 - 8888627
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  8888708 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 8888627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 436 - 543
Target Start/End: Complemental strand, 18012110 - 18012001
Alignment:
Q  436 atatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaatt-actt-gttcctagagtttctcacatattagttgtgaattttc 533  Q
    |||||||| ||||| ||||||||||||||||||||  ||  |||||||||  | ||| |||| ||  | | ||||| |||||||||||||||||||||||    
T  18012110 atatttttctactaaatctaatatgtgaattacttgttcgcaaagtaatacttgatttactttgtatccaaagtttatcacatattagttgtgaattttc 18012011  T
Q  534 tctataaata 543  Q
    ||||||||||    
T  18012010 tctataaata 18012001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 546
Target Start/End: Original strand, 18350154 - 18350211
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 546  Q
    ||||||||||||| | |||||||||| ||||||||| ||| |||||||||||||||||    
T  18350154 aattacttgttcccaaagtttctcacctattagttgcgaagtttctctataaatagag 18350211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 490 - 551
Target Start/End: Complemental strand, 49020167 - 49020106
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactc 551  Q
    |||||||||||| | | ||| |||| |||||||||||||||||||||||||||| |||||||    
T  49020167 attacttgttcccaaaatttatcacttattagttgtgaattttctctataaatatagaactc 49020106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 14425222 - 14425286
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||||| | |||||||||| |||||| |||||| |||||||| ||||||||| |||||    
T  14425222 aattacttgttcccaaagtttctcacctattagctgtgaagtttctctagaaatagagagctcac 14425286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 490 - 553
Target Start/End: Original strand, 8488771 - 8488834
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    |||||||||| | | |||||||||| |||||||||| || | ||||||||||||||||||||||    
T  8488771 attacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcac 8488834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 580 - 631
Target Start/End: Original strand, 17025554 - 17025605
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacg 631  Q
    |||||| ||||||||||||||||| ||||| ||||||| |||||||||||||    
T  17025554 tattgaattgtcgagaactctttccctcttatccctccggcttgtgttaacg 17025605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 495 - 546
Target Start/End: Complemental strand, 51923043 - 51922992
Alignment:
Q  495 ttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 546  Q
    ||||||| | |||||||||| ||||||||||||| |||||||||||||||||    
T  51923043 ttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagag 51922992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 552
Target Start/End: Original strand, 4106722 - 4106768
Alignment:
Q  506 gtttctcacatattagttgtgaattttctctataaatagagaactca 552  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||||    
T  4106722 gtttctcacttattagttgtaaattctctctataaatagagaactca 4106768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 552
Target Start/End: Original strand, 4110574 - 4110620
Alignment:
Q  506 gtttctcacatattagttgtgaattttctctataaatagagaactca 552  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||||    
T  4110574 gtttctcacttattagttgtaaattctctctataaatagagaactca 4110620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 294
Target Start/End: Original strand, 10585102 - 10585211
Alignment:
Q  184 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtga 283  Q
    |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || ||||||||  ||||||||||||| |||| ||||||||||||||     
T  10585102 acacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaa-gtggaagtcccacatcggatggatcacacattagtagtgtttatatagtgg 10585200  T
Q  284 ggttgtacctc 294  Q
    || ||||||||    
T  10585201 gggtgtacctc 10585211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 552
Target Start/End: Complemental strand, 15965753 - 15965707
Alignment:
Q  506 gtttctcacatattagttgtgaattttctctataaatagagaactca 552  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||||    
T  15965753 gtttctcacttattagttgtaaattctctctataaatagagaactca 15965707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 552
Target Start/End: Complemental strand, 15969677 - 15969631
Alignment:
Q  506 gtttctcacatattagttgtgaattttctctataaatagagaactca 552  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||||    
T  15969677 gtttctcacttattagttgtaaattctctctataaatagagaactca 15969631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 552
Target Start/End: Complemental strand, 15973601 - 15973555
Alignment:
Q  506 gtttctcacatattagttgtgaattttctctataaatagagaactca 552  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||||    
T  15973601 gtttctcacttattagttgtaaattctctctataaatagagaactca 15973555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 490 - 564
Target Start/End: Original strand, 22758560 - 22758634
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | | |||||||| |||||||||| || | ||||||||||||||||||||||  |||||||||    
T  22758560 attacttgtttccaaaatttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattc 22758634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 433 - 481
Target Start/End: Original strand, 10585539 - 10585587
Alignment:
Q  433 gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  10585539 gagatatttttgtactagatctaatatgagaattacttgctcccaaagt 10585587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 45903924 - 45903988
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||| ||||| |||||||||| ||||| ||  ||| |||||||||||||||||| |||||    
T  45903924 aattacttgctcctaaagtttctcacttattactttggaactttctctataaatagagagctcac 45903988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 580 - 615
Target Start/End: Original strand, 12965336 - 12965371
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccct 615  Q
    ||||||||||||| ||||||||||||||||||||||    
T  12965336 tattgagttgtcgggaactctttctctcttctccct 12965371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 452
Target Start/End: Original strand, 14425169 - 14425220
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagat 452  Q
    |||||||||||||||||| |||| |||| || ||||||||||| ||||||||    
T  14425169 gtactcaatatgatatattttggtactcaattgagatatttttgtactagat 14425220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 466
Target Start/End: Original strand, 53502447 - 53502518
Alignment:
Q  396 ctttcgtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaatt 466  Q
    |||| |||||| ||| ||||||| ||||||||| ||  ||||||||||| ||||| ||||||||||||||||    
T  53502447 cttttgtactcgataggatatattttggcactcaatttgagatatttttgtactatatctaatatgtgaatt 53502518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Original strand, 7570666 - 7570700
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  7570666 attgagttgtcgggaactctttctctcttctccct 7570700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Original strand, 23660914 - 23660948
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  23660914 attgagttgtcgggaactctttctctcttctccct 23660948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Original strand, 23665573 - 23665607
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  23665573 attgagttgtcgggaactctttctctcttctccct 23665607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Original strand, 24037821 - 24037855
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  24037821 attgagttgtcgggaactctttctctcttctccct 24037855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 585 - 631
Target Start/End: Original strand, 25726231 - 25726277
Alignment:
Q  585 agttgtcgagaactctttctctcttctccctccagcttgtgttaacg 631  Q
    ||||||||||||||||||||||||||||  | | |||||||||||||    
T  25726231 agttgtcgagaactctttctctcttctcatttcggcttgtgttaacg 25726277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Complemental strand, 46964657 - 46964623
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  46964657 attgagttgtcgggaactctttctctcttctccct 46964623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Complemental strand, 55326423 - 55326389
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  55326423 attgagttgtcgggaactctttctctcttctccct 55326389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 470
Target Start/End: Original strand, 12899092 - 12899129
Alignment:
Q  433 gagatatttttatactagatctaatatgtgaattactt 470  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  12899092 gagatatttttgtactaaatctaatatgtgaattactt 12899129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 470
Target Start/End: Complemental strand, 16023277 - 16023240
Alignment:
Q  433 gagatatttttatactagatctaatatgtgaattactt 470  Q
    |||||||| || ||||||||||||||||||||||||||    
T  16023277 gagatattgttgtactagatctaatatgtgaattactt 16023240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 558
Target Start/End: Complemental strand, 19340172 - 19340119
Alignment:
Q  505 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagt 558  Q
    ||||||| |||||||| ||||||||||||| |||||||||| | ||||| ||||    
T  19340172 agtttctaacatattatttgtgaattttctttataaatagatagctcacatagt 19340119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 576 - 629
Target Start/End: Original strand, 32746243 - 32746296
Alignment:
Q  576 gttatattgagttgtcgagaactctttctctcttctccctccagcttgtgttaa 629  Q
    ||||| |||||||||||| || ||||||||||||||| || ||| |||||||||    
T  32746243 gttatgttgagttgtcgataattctttctctcttctctcttcagtttgtgttaa 32746296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 481
Target Start/End: Original strand, 45903861 - 45903942
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||| ||||||| |||  |||| ||  ||||||||||| || ||||||||||||| ||||||||| |||| |||||    
T  45903861 gtactcaataagatatattttgagactcaatttgagatatttttgtattagatctaatatgagaattacttgctcctaaagt 45903942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 429118 - 429062
Alignment:
Q  515 atattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    |||||| |||||||||||||||||||||| ||| |||||  ||| ||||||| ||||    
T  429118 atattacttgtgaattttctctataaataaagagctcacaaagttcattccacacac 429062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 583 - 615
Target Start/End: Complemental strand, 3419632 - 3419600
Alignment:
Q  583 tgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||| ||||||||||||||||||||||    
T  3419632 tgagttgtcgggaactctttctctcttctccct 3419600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 582 - 610
Target Start/End: Original strand, 12112118 - 12112146
Alignment:
Q  582 ttgagttgtcgagaactctttctctcttc 610  Q
    |||||||||||||||||||||||||||||    
T  12112118 ttgagttgtcgagaactctttctctcttc 12112146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 147 - 179
Target Start/End: Complemental strand, 28126397 - 28126365
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaaga 179  Q
    |||||||||||||||| ||||||||||||||||    
T  28126397 tgttgaaacatgtgtgaaaattgagttaaaaga 28126365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 53358805 - 53358757
Alignment:
Q  505 agtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||| |||| ||||||||||||| ||||| |||||||||||| |||||    
T  53358805 agtttttcacttattagttgtgaactttctttataaatagagagctcac 53358757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 96; Significance: 1e-46; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 401 - 623
Target Start/End: Complemental strand, 256612 - 256391
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaattacttgttc 500  Q
    ||||||||||| |||||| || |||||| || || |||||||| || ||||||||||||||||||||| || ||  |||||||| |   |||||||||||    
T  256612 gtactcaatataatatattttcgcactcaattgaaatatttttgtattagatctaatatgtgaattacctaatctcaaagtaatgt---attacttgttc 256516  T
Q  501 ctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac--aagggttatattgagttgtcgagaact 598  Q
    | | |||||||||| |||||||||||||| |||||||||||||||||| |||| ||||||||| || ||||  ||| ||| |||||||||||||| ||||    
T  256515 ccaaagtttctcacttattagttgtgaatattctctataaatagagaaatcacatagtgcatttcacacaccaaagagttctattgagttgtcgataact 256416  T
Q  599 ctttctctcttctccctccagcttg 623  Q
    ||||||||||||| |||||| ||||    
T  256415 ctttctctcttcttcctccaacttg 256391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 150 - 292
Target Start/End: Complemental strand, 257844 - 257703
Alignment:
Q  150 tgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatga 249  Q
    ||||| ||||||||||||||||||||||||||  ||||||||||| | || | | |||| || ||||||  ||||||||||| |||||| || |||| ||    
T  257844 tgaaatatgtgtggaaattgagttaaaagactaaacacaaattcttatgttgagtagaactaatgttgtgtgaattgaaaaaagtgaaagtctcacacga 257745  T
Q  250 gatggatcacacactagtggtgtttatatagtgaggttgtacc 292  Q
     ||| | |||||| ||||  ||||||||||||| |||||||||    
T  257744 -atgaaacacacattagtattgtttatatagtggggttgtacc 257703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 2e-38; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 638
Target Start/End: Original strand, 15990990 - 15991225
Alignment:
Q  402 tactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaattacttgttcc 501  Q
    |||||||||| |||||| ||   |||| || |||||||||||||||||| |||||| ||||||||||||| | | ||| |||| |   |||||||||| |    
T  15990990 tactcaatataatatattttattactcaattgagatatttttatactaggtctaatttgtgaattacttaataccaaaataatgt---attacttgtttc 15991086  T
Q  502 tagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac--aagggttatattgagttgtcgagaactc 599  Q
     | |||||||||| |||||||||||||||||||||| ||||||||||| |   |||||||||||| ||||  |||  || ||||||||| |||| |||||    
T  15991087 caaagtttctcacttattagttgtgaattttctctacaaatagagaacacgtatagtgcattccacacaccaaagatttctattgagttatcgacaactc 15991186  T
Q  600 tttctctcttctccctccagcttgtgttaacgtgctatt 638  Q
    |||||||||||||||||||  ||||||||| | ||||||    
T  15991187 tttctctcttctccctccaagttgtgttaatgagctatt 15991225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 402 - 553
Target Start/End: Original strand, 2759671 - 2759819
Alignment:
Q  402 tactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaattacttgttcc 501  Q
    |||||||||  |||||| |||| | || || ||||||||||| || |||||||||||||||||||||||| | | |||||||| |   |||||||||||     
T  2759671 tactcaataaaatatattttggtattcaattgagatatttttttattagatctaatatgtgaattacttaatgccaaagtaatgt---attacttgttca 2759767  T
Q  502 tagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
     | ||||||| || ||||||||||||||||||||| |||| ||||| |||||    
T  2759768 aaaagtttcttacttattagttgtgaattttctctgtaaacagagagctcac 2759819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 433 - 551
Target Start/End: Original strand, 9751106 - 9751225
Alignment:
Q  433 gagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgt-aattacttgttcctagagtttctcacatattagttgtgaattt 531  Q
    ||||||||||| || | ||||||||  |||||||||||  ||| |||||||||||| ||||| ||||  | | |||||| || |||||||||||||||||    
T  9751106 gagatatttttgtattggatctaatgagtgaattacttcatcccaaagtaatatgtgaattatttgtgtccaaagtttcacatatattagttgtgaattt 9751205  T
Q  532 tctctataaatagagaactc 551  Q
    ||| ||||||||||||||||    
T  9751206 tctatataaatagagaactc 9751225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 489 - 564
Target Start/End: Complemental strand, 16625131 - 16625056
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    ||||||||||||| | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  16625131 aattacttgttcccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 16625056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 577 - 627
Target Start/End: Original strand, 19994844 - 19994894
Alignment:
Q  577 ttatattgagttgtcgagaactctttctctcttctccctccagcttgtgtt 627  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19994844 ttatattgagttgtagagaactctttctctcttctccctccagcttgtgtt 19994894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 481 - 571
Target Start/End: Original strand, 2862842 - 2862933
Alignment:
Q  481 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    |||||||| ||||||||||||| | |||| | |||||| || |||||||||||||||||||||||||| ||||| |||| ||||||| ||||    
T  2862842 taatatgtgaattacttgttcccaaagttgcacacatactatttgtgaattttctctataaatagagagctcacatagttcattccatacac 2862933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 564
Target Start/End: Original strand, 31477084 - 31477158
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  31477084 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 31477158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 2759484 - 2759552
Alignment:
Q  402 tactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 470  Q
    |||||||||| |||||| |||| |||| || ||||||||||| || |||||||||||||||||||||||    
T  2759484 tactcaatataatatattttggtactcaattgagatatttttttattagatctaatatgtgaattactt 2759552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 580 - 648
Target Start/End: Complemental strand, 17914231 - 17914163
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttcttctca 648  Q
    ||||| ||| |||||||||||||||| ||||||||||||||||||||| ||| |||||| |||| ||||    
T  17914231 tattgtgttttcgagaactctttctcacttctccctccagcttgtgttgacgagctattcttctcctca 17914163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 553
Target Start/End: Complemental strand, 27073700 - 27073636
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||||| | |||||||||| ||||||||||||| ||||| |||||||||||| |||||    
T  27073700 aattacttgttcccaaagtttctcacctattagttgtgaaatttctttataaatagagagctcac 27073636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 643
Target Start/End: Complemental strand, 17600013 - 17599950
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttct 643  Q
    |||||||||||||| ||||||||||||||||||| |||| |||||||| ||| |||||| ||||    
T  17600013 tattgagttgtcgaaaactctttctctcttctccatccaacttgtgttgacgagctattcttct 17599950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 508 - 571
Target Start/End: Original strand, 24588576 - 24588639
Alignment:
Q  508 ttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||| |||||||| ||||||||||||||||||||||| |||||  ||||||||||| ||||    
T  24588576 ttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacac 24588639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 490 - 564
Target Start/End: Original strand, 15704291 - 15704365
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| || | ||||||||||||||||||||||  |||||||||    
T  15704291 attacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattc 15704365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 488 - 564
Target Start/End: Original strand, 6112137 - 6112213
Alignment:
Q  488 taattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| ||| | |||||||||| ||||||||| ||| ||||| |||||||||||| |||||  |||||||||    
T  6112137 taattacttgctcccaaagtttctcacttattagttgggaactttctatataaatagagagctcacacagtgcattc 6112213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 493 - 553
Target Start/End: Complemental strand, 26981306 - 26981246
Alignment:
Q  493 acttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||| | |||||||||| ||||||||||||| ||||| |||||||||||| |||||    
T  26981306 acttgttcccaaagtttctcacctattagttgtgaaatttctttataaatagagagctcac 26981246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 392 - 467
Target Start/End: Original strand, 28964130 - 28964206
Alignment:
Q  392 atatctttcgtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaatta 467  Q
    |||| ||| |||||||||||||||||| |||| |||| ||  ||||||||||| ||||||||||||||| |||||||    
T  28964130 atatattttgtactcaatatgatatattttggtactcaatttgagatatttttgtactagatctaatatttgaatta 28964206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 584 - 631
Target Start/End: Original strand, 2759865 - 2759912
Alignment:
Q  584 gagttgtcgagaactctttctctcttctccctccagcttgtgttaacg 631  Q
    |||||||||| ||||||||||||||||||||| | |||||||||||||    
T  2759865 gagttgtcgataactctttctctcttctcccttcggcttgtgttaacg 2759912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 435 - 470
Target Start/End: Original strand, 2882126 - 2882161
Alignment:
Q  435 gatatttttatactagatctaatatgtgaattactt 470  Q
    ||||||||||||||||||||||||||||||||||||    
T  2882126 gatatttttatactagatctaatatgtgaattactt 2882161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 16761097 - 16761022
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctc-tataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| |||| |||| ||||||||||||||||||  |||||||||    
T  16761097 attacttgtttccaaagtttctcacttattagttgtaaattatctcctataaatagagaactcacacagtgcattc 16761022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 505 - 564
Target Start/End: Original strand, 19772407 - 19772466
Alignment:
Q  505 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| |||||||||| || | ||||||||||||||||||||||  |||||||||    
T  19772407 agtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattc 19772466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 490 - 553
Target Start/End: Original strand, 27324441 - 27324504
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    |||||||||| | | |||||||||| |||||||||| || | ||||||||||||||||||||||    
T  27324441 attacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcac 27324504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 470
Target Start/End: Original strand, 2862824 - 2862858
Alignment:
Q  436 atatttttatactagatctaatatgtgaattactt 470  Q
    |||||||||||||||||||||||||||||||||||    
T  2862824 atatttttatactagatctaatatgtgaattactt 2862858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 564
Target Start/End: Complemental strand, 22949930 - 22949872
Alignment:
Q  506 gtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    ||||||||| |||||||| | |||| ||||||||||||||||||||||  |||||||||    
T  22949930 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattc 22949872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 564
Target Start/End: Complemental strand, 22953886 - 22953828
Alignment:
Q  506 gtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    ||||||||| |||||||| | |||| ||||||||||||||||||||||  |||||||||    
T  22953886 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattc 22953828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 564
Target Start/End: Complemental strand, 23872374 - 23872316
Alignment:
Q  506 gtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    ||||||||| |||||||| | |||| ||||||||||||||||||||||  |||||||||    
T  23872374 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattc 23872316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 564
Target Start/End: Complemental strand, 23876330 - 23876272
Alignment:
Q  506 gtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    ||||||||| |||||||| | |||| ||||||||||||||||||||||  |||||||||    
T  23876330 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattc 23876272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 581 - 648
Target Start/End: Original strand, 12405812 - 12405876
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttcttctca 648  Q
    |||||||||||||||||||||||||||||   |||||||||||||||  || |||||| |||| ||||    
T  12405812 attgagttgtcgagaactctttctctctt---cctccagcttgtgttggcgagctattcttctcctca 12405876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 2862426 - 2862510
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaa 231  Q
    ||||| |||||||||  |||||||||||||| |||  |||||||||||||| |  || ||||||||||||||  ||||| |||||    
T  2862426 tgttggaacatgtgtaaaaattgagttaaaaaactagacacaaattctcacatttggtagaattagtgttgtgtgaattaaaaaa 2862510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 553
Target Start/End: Complemental strand, 18387647 - 18387583
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    |||||||||| || | |||||||||| ||||| ||||||| ||||| |||||||||||| |||||    
T  18387647 aattacttgtccccaaagtttctcacctattaattgtgaagtttctgtataaatagagagctcac 18387583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 571
Target Start/End: Original strand, 2882145 - 2882236
Alignment:
Q  481 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    |||||||| ||||||||||||| | | || | |||||| || |||||||||||||||||||||  ||| ||||| |||| ||||||| ||||    
T  2882145 taatatgtgaattacttgttcccaaatttgcacacatactatttgtgaattttctctataaattcagagctcacatagttcattccatacac 2882236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 552
Target Start/End: Complemental strand, 14073834 - 14073787
Alignment:
Q  505 agtttctcacatattagttgtgaattttctctataaatagagaactca 552  Q
    |||||||||  ||||||||||||| |||||||||||||||||| ||||    
T  14073834 agtttctcatctattagttgtgaaatttctctataaatagagagctca 14073787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 545
Target Start/End: Original strand, 14322790 - 14322845
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaataga 545  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||    
T  14322790 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaataga 14322845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 581 - 616
Target Start/End: Original strand, 16835608 - 16835643
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccctc 616  Q
    |||||||||||| |||||||||||||||||||||||    
T  16835608 attgagttgtcgggaactctttctctcttctccctc 16835643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Complemental strand, 11428605 - 11428571
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  11428605 attgagttgtcgggaactctttctctcttctccct 11428571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Complemental strand, 14509618 - 14509584
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  14509618 attgagttgtcgggaactctttctctcttctccct 14509584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 22807065 - 22806991
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||  |||||||||| || | ||||||||||||| ||||||||  |||||||||    
T  22807065 attacttgtttccaaagtttctcatttattagttgtaaactatctctataaatagggaactcacacagtgcattc 22806991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 24588522 - 24588568
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattc 193  Q
    ||||| |||||||||||||||||||| ||||||||  ||||||||||    
T  24588522 tgttggaacatgtgtggaaattgagtaaaaagactaaacacaaattc 24588568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 28963740 - 28963786
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattc 193  Q
    ||||| ||||||||||||||||||||||||||||   ||||||||||    
T  28963740 tgttggaacatgtgtggaaattgagttaaaagaccaaacacaaattc 28963786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 576 - 613
Target Start/End: Original strand, 13657511 - 13657548
Alignment:
Q  576 gttatattgagttgtcgagaactctttctctcttctcc 613  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  13657511 gttatattgagttatcgataactctttctctcttctcc 13657548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 326
Target Start/End: Complemental strand, 15645771 - 15645702
Alignment:
Q  257 cacacactagtggtgtttatatagtgaggttgtacctcaaatgggatgcataattaagtgaacgaagtaa 326  Q
    |||||| ||||||| |||||||||||||| || ||||| ||  || | |||||||| |||||||||||||    
T  15645771 cacacattagtggtatttatatagtgagggtgcacctctaagcggctacataattatgtgaacgaagtaa 15645702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 2881729 - 2881813
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaa 231  Q
    ||||| |||||||||  |||||||||||||| |||  |||||||||||||| |  || |||| |||||||||  ||||| |||||    
T  2881729 tgttggaacatgtgtaaaaattgagttaaaaaactagacacaaattctcacatttggtagaactagtgttgtgtgaattaaaaaa 2881813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 147 - 179
Target Start/End: Original strand, 2886402 - 2886434
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaaga 179  Q
    |||||||||||||||| ||||||||||||||||    
T  2886402 tgttgaaacatgtgtgaaaattgagttaaaaga 2886434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 433 - 481
Target Start/End: Original strand, 6112108 - 6112156
Alignment:
Q  433 gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    ||||||||||| ||||||||||||||||  |||||||| |||| |||||    
T  6112108 gagatatttttgtactagatctaatatgataattacttgctcccaaagt 6112156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 15641009 - 15640961
Alignment:
Q  505 agtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||| |||| ||||||||||||||| ||||||||||||| || |||||    
T  15641009 agtttatcacgtattagttgtgaattctctctataaatagtgagctcac 15640961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 401 - 449
Target Start/End: Complemental strand, 16625184 - 16625136
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatacta 449  Q
    |||||||||||||||||| |||| |||| || ||||||||||| |||||    
T  16625184 gtactcaatatgatatattttggtactcaattgagatatttttgtacta 16625136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 66; Significance: 8e-29; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 413 - 564
Target Start/End: Complemental strand, 71920 - 71772
Alignment:
Q  413 atatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaattacttgttcctagagtttctc 512  Q
    |||||| |||| |||| || ||||||||||| ||||||| ||||||||| ||||||||| |   |||||||| |   |||||||||||| | ||||||||    
T  71920 atatattttggtactcaattgagatatttttgtactagagctaatatgtaaattacttaatgttaaagtaatgt---attacttgttcccaaagtttctc 71824  T
Q  513 acatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    || |||||||||||||||||||||||||||||||| |||||  |||||||||    
T  71823 acttattagttgtgaattttctctataaatagagagctcacacagtgcattc 71772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 648
Target Start/End: Original strand, 147841 - 147909
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttcttctca 648  Q
    |||||| |||||||||||||||| ||||||| ||||| |||||||||| ||| | |||| |||| ||||    
T  147841 tattgaattgtcgagaactctttatctcttccccctctagcttgtgttgacgagatattcttctcctca 147909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 5e-27; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 489 - 615
Target Start/End: Original strand, 17452965 - 17453098
Alignment:
Q  489 aattacttgttcctagagtttctcac-----atattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac--aagggttata 581  Q
    ||||||||||||| | ||||||||||     | ||||||||| ||||||||||||||||||||| ||||| |||| ||||||| ||||  ||| ||| ||    
T  17452965 aattacttgttcccaaagtttctcacttattagattagttgtaaattttctctataaatagagatctcacatagtacattccacacaccaaagagtttta 17453064  T
Q  582 ttgagttgtcgagaactctttctctcttctccct 615  Q
    ||||||||||||||||||||||||||||||||||    
T  17453065 ttgagttgtcgagaactctttctctcttctccct 17453098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 481 - 561
Target Start/End: Complemental strand, 22845126 - 22845045
Alignment:
Q  481 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgca 561  Q
    |||||||| ||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||    
T  22845126 taatatgtgaattacttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagctcacatagtgca 22845045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 147 - 294
Target Start/End: Original strand, 10159601 - 10159749
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 245  Q
    ||||| ||||| ||||||||||||||||||| ||||  |||||||||| || ||  || |||| |||||||||  ||||||||||| ||| || ||||||    
T  10159601 tgttggaacatctgtggaaattgagttaaaaagactaaacacaaattcccatgttaggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccac 10159700  T
Q  246 atgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 294  Q
    ||  |||||| |||| | |||| |||||||||||||| || ||||||||    
T  10159701 atcggatggaacacatattagtagtgtttatatagtgggggtgtacctc 10159749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 481 - 564
Target Start/End: Complemental strand, 25375613 - 25375529
Alignment:
Q  481 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||| ||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||| || ||  |||||||||    
T  25375613 taatatgtgaattacttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagcttacacagtgcattc 25375529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 407 - 543
Target Start/End: Complemental strand, 30635590 - 30635457
Alignment:
Q  407 aatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaattacttgttcctagag 506  Q
    ||||| |||||| |||| |||| || ||||||||||| ||||||| ||||||||||||||| ||| |   || ||||| |   ||||||||||||   ||    
T  30635590 aatataatatattttggtactcaattgagatatttttttactagagctaatatgtgaattatttaatgtcaatgtaatgt---attacttgttccccaag 30635494  T
Q  507 tttctcacatattagttgtgaattttctctataaata 543  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  30635493 tttctcacttattagttgtgaattttctttataaata 30635457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 401 - 470
Target Start/End: Complemental strand, 22845179 - 22845110
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 470  Q
    ||||||||||| |||||| |||| |||| || ||||||||||| ||||||||||||||||||||||||||    
T  22845179 gtactcaatataatatattttggtactcaattgagatatttttgtactagatctaatatgtgaattactt 22845110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 489 - 553
Target Start/End: Complemental strand, 6856912 - 6856848
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  6856912 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcac 6856848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 1284228 - 1284154
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  1284228 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 1284154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 489 - 546
Target Start/End: Complemental strand, 26897342 - 26897285
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 546  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||    
T  26897342 aattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagag 26897285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 489 - 546
Target Start/End: Complemental strand, 34070134 - 34070077
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 546  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||    
T  34070134 aattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagag 34070077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 580 - 648
Target Start/End: Original strand, 19578029 - 19578097
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttcttctca 648  Q
    |||||||||||||| |||||||||||||||||||||||||  | |||||||| | ||||||||| ||||    
T  19578029 tattgagttgtcgaaaactctttctctcttctccctccagggtttgttaacgagttatttttctcctca 19578097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 544
Target Start/End: Original strand, 30641481 - 30641545
Alignment:
Q  481 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatag 544  Q
    |||||||| ||||||||||||| | |||||||||||||||||||| || ||||||||||||||||    
T  30641481 taatatgtgaattacttgttccaaaagtttctcacatattagttgagatttttctctataaatag 30641545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 294
Target Start/End: Original strand, 6296796 - 6296942
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 246  Q
    ||||| ||||| |||||||||||||| ||  ||||  |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| ||  ||||||    
T  6296796 tgttggaacatatgtggaaattgagt-aattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagacccaca 6296894  T
Q  247 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 294  Q
    |  ||||||||||||| |||| |||||||||||||| || ||||||||    
T  6296895 tcggatggatcacacattagtagtgtttatatagtgggggtgtacctc 6296942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 577 - 648
Target Start/End: Original strand, 40847037 - 40847108
Alignment:
Q  577 ttatattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttcttctca 648  Q
    |||||||||||||||||||| |||||||||||||||| |||||||| || | ||| |||||| |||| ||||    
T  40847037 ttatattgagttgtcgagaattctttctctcttctccatccagcttctgctgacgagctattcttctcctca 40847108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 563
Target Start/End: Original strand, 377669 - 377743
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcatt 563  Q
    |||||||||| |||| |||||||||| | ||||||||||| ||| |||||||||||||| ||||| || ||||||    
T  377669 aattacttgtccctaaagtttctcaccttttagttgtgaagtttttctataaatagagagctcacataatgcatt 377743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 10160115 - 10160181
Alignment:
Q  505 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    |||||||||| ||||||||||||| |||||||| ||||||||| |||||  ||||||||||| ||||    
T  10160115 agtttctcacttattagttgtgaactttctctacaaatagagagctcacacagtgcattccacacac 10160181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 491 - 553
Target Start/End: Complemental strand, 17327773 - 17327711
Alignment:
Q  491 ttacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||| | | |||||||| |||||||||| ||||||||||||||||||||| |||||    
T  17327773 ttacttgttcccaaaatttctcacttattagttgtaaattttctctataaatagagagctcac 17327711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 506 - 564
Target Start/End: Original strand, 30344312 - 30344370
Alignment:
Q  506 gtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  30344312 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 30344370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 470
Target Start/End: Original strand, 7559667 - 7559736
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 470  Q
    |||||||||||||||||| |||| || | || || |||||||| |||||||||| |||||||||||||||    
T  7559667 gtactcaatatgatatattttggtacacaattgaaatatttttgtactagatctgatatgtgaattactt 7559736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 546
Target Start/End: Original strand, 24292841 - 24292898
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 546  Q
    ||||||||||||| | |||||||||| | ||||||||||| |||||||||||||||||    
T  24292841 aattacttgttcccaaagtttctcaccttttagttgtgaagtttctctataaatagag 24292898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 221 - 294
Target Start/End: Complemental strand, 28856223 - 28856150
Alignment:
Q  221 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 294  Q
    ||||||||||| ||| || |||||||| |||||||||||||| |||| |||||||||| ||| || ||||||||    
T  28856223 gaattgaaaaaagtggaagtcccacatcagatggatcacacattagtagtgtttatatggtggggatgtacctc 28856150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 505 - 566
Target Start/End: Complemental strand, 30658876 - 30658815
Alignment:
Q  505 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattcca 566  Q
    |||||||||| ||||||||||||| |||||| ||||||||||| |||||  |||||||||||    
T  30658876 agtttctcacttattagttgtgaactttctccataaatagagagctcacacagtgcattcca 30658815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 17452904 - 17452972
Alignment:
Q  402 tactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 470  Q
    |||||||||| |||||| |||| |||| || ||||||||||| |||||||| ||| |||||||||||||    
T  17452904 tactcaatataatatattttggtactcaattgagatatttttgtactagatataacatgtgaattactt 17452972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 433 - 481
Target Start/End: Original strand, 30641460 - 30641508
Alignment:
Q  433 gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    ||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  30641460 gagatatttttgtactagatctaatatgtgaattacttgttccaaaagt 30641508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 392 - 470
Target Start/End: Complemental strand, 28855917 - 28855838
Alignment:
Q  392 atatctttcgtactcaatatgatatatcttggcactcga-tcgagatatttttatactagatctaatatgtgaattactt 470  Q
    |||| ||| |||||||||||||||||| |||  |||| | | ||||||||||| |||||||||||||||| |||||||||    
T  28855917 atatattttgtactcaatatgatatattttgatactcaagttgagatatttttgtactagatctaatatgagaattactt 28855838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 489 - 532
Target Start/End: Complemental strand, 30629574 - 30629531
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaatttt 532  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||    
T  30629574 aattacttgttcctaaagtttttcacatattagttgtgaatttt 30629531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 490 - 564
Target Start/End: Original strand, 23068133 - 23068207
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||| | |||||||||| || | ||||||||||||||||||||||  |||||||||    
T  23068133 attacttgtttccaaagtttctcgcttattagttgtaaactatctctataaatagagaactcacacagtgcattc 23068207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 553
Target Start/End: Original strand, 7559757 - 7559794
Alignment:
Q  516 tattagttgtgaattttctctataaatagagaactcac 553  Q
    |||||||||||||||||||||||||||||||| |||||    
T  7559757 tattagttgtgaattttctctataaatagagagctcac 7559794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 402 - 481
Target Start/End: Original strand, 10160036 - 10160117
Alignment:
Q  402 tactcaatatgatatatcttggcactcgatc-gagatattttta-tactagatctaatatgtgaattacttactccaaaagt 481  Q
    ||||||||||||||||| |||  |||| ||  |||||||||||  |||||||||||||||| |||||||||||||| |||||    
T  10160036 tactcaatatgatatattttgagactcaatttgagatattttttgtactagatctaatatgagaattacttactcccaaagt 10160117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 489 - 546
Target Start/End: Original strand, 24286273 - 24286330
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 546  Q
    ||||||||||||| | || ||||||| | ||||||||||| |||||||||||||||||    
T  24286273 aattacttgttcccaaagcttctcaccttttagttgtgaagtttctctataaatagag 24286330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 401 - 470
Target Start/End: Complemental strand, 25375666 - 25375597
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 470  Q
    ||||||||||| ||| || |||| |||| |  ||||||| ||| ||||||||||||||||||||||||||    
T  25375666 gtactcaatataatagattttggtactcaactgagatatatttgtactagatctaatatgtgaattactt 25375597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 434 - 501
Target Start/End: Original strand, 19589052 - 19589120
Alignment:
Q  434 agatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgt-aattacttgttcc 501  Q
    ||||||||||||| |||||||| ||||||||||||||  | | |||||||||| | |||||||||||||    
T  19589052 agatatttttatattagatctagtatgtgaattacttctttcgaaagtaatatttgaattacttgttcc 19589120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 545
Target Start/End: Original strand, 3238840 - 3238871
Alignment:
Q  514 catattagttgtgaattttctctataaataga 545  Q
    ||||||||||||||||||||||||||||||||    
T  3238840 catattagttgtgaattttctctataaataga 3238871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 553
Target Start/End: Complemental strand, 9785862 - 9785799
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    |||||||||| | | |||||||||| |||||||||| || | || |||||||||||||||||||    
T  9785862 attacttgtttccaaagtttctcacttattagttgtaaactatccctataaatagagaactcac 9785799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 571
Target Start/End: Original strand, 13290942 - 13291025
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctcta-taaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||||||||| | |  ||||||||||||||||||||||| |||||| | |||| ||| ||||| |||| ||||||| ||||    
T  13290942 aattacttgttcccaaaaattctcacatattagttgtgaattatctctatttaatatagagctcacatagttcattccatacac 13291025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 580 - 615
Target Start/End: Complemental strand, 30651560 - 30651525
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccct 615  Q
    ||||||||||||| ||||||||||||||||||||||    
T  30651560 tattgagttgtcgggaactctttctctcttctccct 30651525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Original strand, 1934443 - 1934477
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  1934443 attgagttgtcgggaactctttctctcttctccct 1934477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 392 - 481
Target Start/End: Original strand, 6297200 - 6297290
Alignment:
Q  392 atatctttcgtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||| ||| |||||||||||||||||| |||  |||| ||  |||||| |||| |||||||||||||||| ||||| ||| |||| |||||    
T  6297200 atatattttgtactcaatatgatatattttgagactcaatttgagatacttttgtactagatctaatatgagaattgcttgctcccaaagt 6297290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Original strand, 9184867 - 9184901
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  9184867 attgagttgtcgggaactctttctctcttctccct 9184901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 326
Target Start/End: Original strand, 17452512 - 17452573
Alignment:
Q  264 tagtggtgtttatatagtgaggttgtacctcaaatgggatgcataattaagtgaacgaagtaa 326  Q
    |||| |||||||||||||| ||||||||||  || ||||| |||||||| |||||||||||||    
T  17452512 tagtagtgtttatatagtg-ggttgtacctttaaagggatacataattatgtgaacgaagtaa 17452573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Complemental strand, 31327398 - 31327364
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  31327398 attgagttgtcgggaactctttctctcttctccct 31327364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 35602804 - 35602754
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagtt-aaaagactttacacaaattctca 196  Q
    ||||| ||||||||||||||||||||| ||||||||  |||||||||||||    
T  35602804 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattctca 35602754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 30659368 - 30659283
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagtt-aaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaa 231  Q
    ||||| ||||||||||||||||||||| ||||||||  ||| ||| || || || ||| |||| |||||||||  |||||||||||    
T  30659368 tgttggaacatgtgtggaaattgagttaaaaagactaaacaaaaactcccatgttgggtagaactagtgttgtgtgaattgaaaaa 30659283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 546
Target Start/End: Complemental strand, 42248942 - 42248885
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 546  Q
    ||||||||||| | | |||||||||| ||||||||  ||| |||||||||||||||||    
T  42248942 aattacttgtttccaaagtttctcacctattagttcggaagtttctctataaatagag 42248885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 477 - 532
Target Start/End: Complemental strand, 30619599 - 30619543
Alignment:
Q  477 aaagtaatatgt-aattacttgttcctagagtttctcacatattagttgtgaatttt 532  Q
    |||||||||| | ||||||||||||||| |  || ||||||||||||||||||||||    
T  30619599 aaagtaatatttgaattacttgttcctaaaaattttcacatattagttgtgaatttt 30619543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 516 - 552
Target Start/End: Original strand, 38426927 - 38426962
Alignment:
Q  516 tattagttgtgaattttctctataaatagagaactca 552  Q
    ||||||||||||||||||| |||||||||||||||||    
T  38426927 tattagttgtgaattttct-tataaatagagaactca 38426962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 576 - 616
Target Start/End: Complemental strand, 38591862 - 38591822
Alignment:
Q  576 gttatattgagttgtcgagaactctttctctcttctccctc 616  Q
    ||||||||||||| |||| | ||||||||||||||||||||    
T  38591862 gttatattgagttatcgatatctctttctctcttctccctc 38591822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 2e-23; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 147 - 294
Target Start/End: Complemental strand, 562677 - 562530
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 245  Q
    ||||| ||||||||||||||||||||||||| ||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  562677 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccac 562579  T
Q  246 atgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 294  Q
    ||  |||||| |||||| |||| |||||||||||||| || ||||||||    
T  562578 atcggatggaacacacattagtagtgtttatatagtgggggtgtacctc 562530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 147 - 294
Target Start/End: Complemental strand, 557907 - 557758
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagtt-aaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 245  Q
    ||||| ||||||||||||||||||||| ||||||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  557907 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccac 557809  T
Q  246 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 294  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  557808 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 557758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 147 - 282
Target Start/End: Original strand, 12044014 - 12044152
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 245  Q
    ||||| ||||||||||||||||||||||||| ||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| |||||| |||| |    
T  12044014 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtgaaagtccctc 12044113  T
Q  246 atgagatggatcacacac--tagtggtgtttatatagtg 282  Q
    ||  |||||| |||||||  |||| ||||||||||||||    
T  12044114 atcggatggaacacacacattagtagtgtttatatagtg 12044152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 481 - 564
Target Start/End: Complemental strand, 3666637 - 3666553
Alignment:
Q  481 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||| ||||||||||||  | |||||||||| |||||||||||||||||||||||||||||||| |||||| || ||||||    
T  3666637 taatatgtgaattacttgttctcaaagtttctcacttattagttgtgaattttctctataaatagagagctcacgcagggcattc 3666553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 576 - 648
Target Start/End: Original strand, 16115678 - 16115750
Alignment:
Q  576 gttatattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttcttctca 648  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||||||||||||| | ||||||||| ||||    
T  16115678 gttatattgagttgttaagaactctttctctcatctccctccagcttgtgttaacgagttatttttctcctca 16115750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 147 - 291
Target Start/End: Complemental strand, 42002645 - 42002498
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagtt-aaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 245  Q
    ||||| ||||||||||||||||||||| ||||||||  ||||||||||  | || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  42002645 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcatatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccac 42002546  T
Q  246 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtac 291  Q
    ||  |||||| |||||||  |||| ||||||||||| ||||| |||||    
T  42002545 atcggatggaacacacacattagtagtgtttatatattgagggtgtac 42002498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 529 - 638
Target Start/End: Original strand, 1429584 - 1429697
Alignment:
Q  529 ttttctctataaatagagaactcacgtagtgcattccagacac--aagggttatattgagttgtcgagaactctttctc--tcttctccctccagcttgt 624  Q
    |||| |||||||||||||| ||||| |||||||||| | || |  ||| ||| ||| |||||||||| |||||||||||  |||||||||||||||||||    
T  1429584 ttttttctataaatagagagctcacatagtgcattctacacgccaaagagttctatcgagttgtcgataactctttctctctcttctccctccagcttgt 1429683  T
Q  625 gttaacgtgctatt 638  Q
    ||||||| ||||||    
T  1429684 gttaacgagctatt 1429697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 147 - 294
Target Start/End: Original strand, 36941147 - 36941296
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaa-agactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 245  Q
    ||||| |||||||||||||||||||||||| |||||  |||||||||| || || ||| |||| ||||||| |  ||||||||||| ||| || ||||||    
T  36941147 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattcccatgttgggtagaactagtgttctgtgaattgaaaaa-gtggaagtcccac 36941245  T
Q  246 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 294  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  36941246 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 36941296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 489 - 571
Target Start/End: Original strand, 36936890 - 36936972
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  36936890 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacac 36936972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 489 - 571
Target Start/End: Original strand, 36941644 - 36941726
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  36941644 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccatacac 36941726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 489 - 571
Target Start/End: Complemental strand, 41997379 - 41997297
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  41997379 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacac 41997297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 489 - 571
Target Start/End: Complemental strand, 42002148 - 42002066
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  42002148 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacac 42002066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 147 - 326
Target Start/End: Original strand, 21322921 - 21323104
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 246  Q
    ||||| ||||| |||||||||||||| ||  ||||  |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || |||||||    
T  21322921 tgttggaacatatgtggaaattgagt-aattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccaca 21323019  T
Q  247 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-----gggatgcataattaagtgaacgaagtaa 326  Q
    |  ||||||||||||| |||| |||||||||||||| || |||||||| |||     ||| | |||||||| |||||||||||||    
T  21323020 tcggatggatcacacattagtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaa 21323104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 146 - 294
Target Start/End: Original strand, 32460426 - 32460577
Alignment:
Q  146 atgttgaaacatgtgtggaaattgagtt-aaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattccca 244  Q
    |||||| ||||||||| ||||||||||| ||||||||   ||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || | |||    
T  32460426 atgttggaacatgtgttgaaattgagttaaaaagactaatcacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagtacca 32460525  T
Q  245 catgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 294  Q
    |||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  32460526 catcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 32460577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 481 - 564
Target Start/End: Complemental strand, 36949509 - 36949425
Alignment:
Q  481 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||| ||||||||||||| | |||||||||| |||||||| |||||||| |||||||||||||| |||||  |||||||||    
T  36949509 taatatgtgaattacttgttcccaaagtttctcacttattagttatgaattttttctataaatagagagctcacacagtgcattc 36949425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 147 - 279
Target Start/End: Complemental strand, 41997854 - 41997719
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 245  Q
    ||||| |||||||||| |||||||||||||| ||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  41997854 tgttggaacatgtgtgaaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccac 41997755  T
Q  246 atgagatggatcacacac--tagtggtgtttatata 279  Q
    ||  |||||| |||||||  |||| |||||||||||    
T  41997754 atcggatggaacacacacattagtagtgtttatata 41997719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 184 - 326
Target Start/End: Original strand, 13300406 - 13300553
Alignment:
Q  184 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtga 283  Q
    |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || |||||||| |||||||||||||| |||| ||||||||||||||     
T  13300406 acacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacatcagatggatcacacattagtagtgtttatatagtgg 13300505  T
Q  284 ggttgtacctcaaat-----gggatgcataattaagtgaacgaagtaa 326  Q
    || |||||||| |||     ||| | |||||||| |||||||||||||    
T  13300506 gggtgtacctctaattaatgggggtacataattatgtgaacgaagtaa 13300553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 557395 - 557329
Alignment:
Q  505 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  557395 agtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacac 557329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 146 - 326
Target Start/End: Complemental strand, 3667084 - 3666905
Alignment:
Q  146 atgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 245  Q
    |||||| |||||||||||||||||||| ||||||||  ||||||||| ||| || | | |||| |||||||||   |||||||||| ||| || ||||||    
T  3667084 atgttggaacatgtgtggaaattgagtaaaaagactaaacacaaattttcatgttgtgtagaaatagtgttgtgtaaattgaaaaaggtggaagtcccac 3666985  T
Q  246 atgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-gggatgcataattaagtgaacgaagtaa 326  Q
    ||  |||||| ||  || |||| |||||  ||||||| || |||||||| ||| ||| | |||||||| |||||||| ||||    
T  3666984 atcggatggaacaagcattagtagtgtt--tatagtgggggtgtacctctaataggggtacataattatgtgaacgatgtaa 3666905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 10754164 - 10754090
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  10754164 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 10754090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 571
Target Start/End: Original strand, 13300869 - 13300951
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||| ||||| ||||    
T  13300869 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttccacacac 13300951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 571
Target Start/End: Original strand, 23976966 - 23977048
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||||| ||| | |||||||||| ||||||| ||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  23976966 aattacttgctcccaaagtttctcacttattagtagtgaactttctctataaatagagagctcacacagtgcattccatacac 23977048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 571
Target Start/End: Original strand, 32460923 - 32461005
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||||| ||||| |||||||||| ||||||||||||| ||| |||||||||||||| |||||  | ||||||||| ||||    
T  32460923 aattacttgctcctaaagtttctcacttattagttgtgaactttatctataaatagagagctcacacaatgcattccatacac 32461005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 577 - 630
Target Start/End: Original strand, 2859941 - 2859994
Alignment:
Q  577 ttatattgagttgtcgagaactctttctctcttctccctccagcttgtgttaac 630  Q
    ||||||||||||||||| |||| ||||||||||||||||||| |||||||||||    
T  2859941 ttatattgagttgtcgaaaactttttctctcttctccctccaacttgtgttaac 2859994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 553
Target Start/End: Complemental strand, 21826938 - 21826874
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||||| | |||||||||| |||||| |||||| |||||||||||||||||| |||||    
T  21826938 aattacttgttcccaaagtttctcacctattagctgtgaagtttctctataaatagagagctcac 21826874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 580 - 648
Target Start/End: Original strand, 23757264 - 23757332
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttcttctca 648  Q
    ||||||||||||||||||||||| ||||||||||||| ||||| |||| ||| |||||| |||| ||||    
T  23757264 tattgagttgtcgagaactctttttctcttctccctctagcttatgttgacgagctattcttctcctca 23757332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 580 - 648
Target Start/End: Original strand, 23822720 - 23822788
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttcttctca 648  Q
    ||||||||||||||||||||||| ||||||||||||| ||||| |||| ||| |||||| |||| ||||    
T  23822720 tattgagttgtcgagaactctttttctcttctccctctagcttatgttgacgagctattcttctcctca 23822788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 26869693 - 26869757
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||||| | |||||||||| |||||| |||||| |||||||||||||||||| |||||    
T  26869693 aattacttgttcccaaagtttctcacctattagctgtgaagtttctctataaatagagagctcac 26869757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 553
Target Start/End: Complemental strand, 31732252 - 31732188
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  31732252 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcac 31732188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 562167 - 562101
Alignment:
Q  505 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||| || ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  562167 agtttcttacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacac 562101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 481
Target Start/End: Original strand, 36936827 - 36936908
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  36936827 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 36936908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 481
Target Start/End: Original strand, 36941581 - 36941662
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  36941581 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 36941662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 470
Target Start/End: Complemental strand, 36949562 - 36949493
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 470  Q
    ||||||||||  |||||| |||| |||| ||  |||||||||| ||||||||||||||||||||||||||    
T  36949562 gtactcaataaaatatattttggtactcaattaagatatttttgtactagatctaatatgtgaattactt 36949493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 15395235 - 15395283
Alignment:
Q  505 agtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    |||| ||||| |||||||||||||||||||||||||||||||| |||||    
T  15395235 agttactcacttattagttgtgaattttctctataaatagagagctcac 15395283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 21323371 - 21323419
Alignment:
Q  505 agtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  21323371 agtttctcacttattagttgtgaactttctctataaatagagagctcac 21323419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 583 - 630
Target Start/End: Original strand, 2848104 - 2848151
Alignment:
Q  583 tgagttgtcgagaactctttctctcttctccctccagcttgtgttaac 630  Q
    ||||||||||| |||| ||||||||||||||||||| |||||||||||    
T  2848104 tgagttgtcgaaaactttttctctcttctccctccaacttgtgttaac 2848151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 580 - 630
Target Start/End: Original strand, 15414346 - 15414394
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaac 630  Q
    |||| ||||||||||||||||  ||||||||||||||||||||||||||||    
T  15414346 tattcagttgtcgagaactct--ctctcttctccctccagcttgtgttaac 15414394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 36936393 - 36936476
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaa-agactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaa 229  Q
    ||||| |||||||||||||||||||||||| |||||  |||||||||| || || ||| |||| |||||||||  |||||||||    
T  36936393 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaa 36936476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 481
Target Start/End: Original strand, 32460863 - 32460941
Alignment:
Q  404 ctcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    ||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  32460863 ctcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcctaaagt 32460941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 553
Target Start/End: Complemental strand, 8770931 - 8770894
Alignment:
Q  516 tattagttgtgaattttctctataaatagagaactcac 553  Q
    |||||||||||||||||||||||||||||||| |||||    
T  8770931 tattagttgtgaattttctctataaatagagagctcac 8770894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 489 - 546
Target Start/End: Complemental strand, 41099245 - 41099188
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 546  Q
    ||||||||||||| | ||||| |||| ||||||||| ||| |||||||||||||||||    
T  41099245 aattacttgttcccaaagtttatcacctattagttgggaagtttctctataaatagag 41099188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 401 - 481
Target Start/End: Complemental strand, 41997442 - 41997361
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| || ||||||||||||| ||||||||| |||| |||||    
T  41997442 gtactcaatatgatatattttgagactcaatttgagatatttttgtattagatctaatatgagaattacttgctcccaaagt 41997361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 401 - 481
Target Start/End: Complemental strand, 42002211 - 42002130
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| || ||||||||||||| ||||||||| |||| |||||    
T  42002211 gtactcaatatgatatattttgagactcaatttgagatatttttgtattagatctaatatgagaattacttgctcccaaagt 42002130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 12044509 - 12044573
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||| ||| | ||||| |||| |||||||||||||||||||||| ||| ||||| |||||    
T  12044509 aattacttgctcccaaagtttttcacttattagttgtgaattttctctagaaaaagagagctcac 12044573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 433 - 481
Target Start/End: Complemental strand, 31732282 - 31732234
Alignment:
Q  433 gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  31732282 gagatatttttgtactagatctaatatgagaattacttgctcccaaagt 31732234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 452
Target Start/End: Complemental strand, 21826991 - 21826940
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagat 452  Q
    |||||||||||||||||| |||| |||| || ||||||||||| ||||||||    
T  21826991 gtactcaatatgatatattttggtactcaattgagatatttttgtactagat 21826940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 481
Target Start/End: Original strand, 23976937 - 23976984
Alignment:
Q  434 agatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  23976937 agatatttttgtactagatctaatatgagaattacttgctcccaaagt 23976984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 452
Target Start/End: Original strand, 26869640 - 26869691
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagat 452  Q
    |||||||||||||||||| |||| |||| || ||||||||||| ||||||||    
T  26869640 gtactcaatatgatatattttggtactcaattgagatatttttgtactagat 26869691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 523 - 558
Target Start/End: Complemental strand, 27425171 - 27425136
Alignment:
Q  523 tgtgaattttctctataaatagagaactcacgtagt 558  Q
    |||||||||||||| |||||||||||||||||||||    
T  27425171 tgtgaattttctctttaaatagagaactcacgtagt 27425136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 294
Target Start/End: Complemental strand, 31732760 - 31732615
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 246  Q
    ||||| ||||| |||||||||||||| ||  ||||  |||||||||| |||   ||  |||| |||||| ||  |||||||||||  || || |||||||    
T  31732760 tgttggaacatatgtggaaattgagt-aattgactaaacacaaattcccacaatggatagaactagtgtagtgtgaattgaaaaaaatggaagtcccaca 31732662  T
Q  247 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 294  Q
    |  ||||||||||||| |||| |||||||||||||| || ||||||||    
T  31732661 tc-gatggatcacacattagtagtgtttatatagtgggggtgtacctc 31732615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 580 - 615
Target Start/End: Complemental strand, 39519041 - 39519006
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccct 615  Q
    ||||||||||||| ||||||||||||||||||||||    
T  39519041 tattgagttgtcgggaactctttctctcttctccct 39519006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 436 - 470
Target Start/End: Complemental strand, 3666655 - 3666621
Alignment:
Q  436 atatttttatactagatctaatatgtgaattactt 470  Q
    |||||||| ||||||||||||||||||||||||||    
T  3666655 atatttttgtactagatctaatatgtgaattactt 3666621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Complemental strand, 4872546 - 4872512
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  4872546 attgagttgtcgggaactctttctctcttctccct 4872512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 24435503 - 24435569
Alignment:
Q  404 ctcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 470  Q
    |||||||| | |||| |||| |||| || ||||||||||| ||||||||||||||| ||| ||||||    
T  24435503 ctcaatataacatattttggtactcaattgagatatttttgtactagatctaatatatgagttactt 24435569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 465
Target Start/End: Complemental strand, 557473 - 557408
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaat 465  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||    
T  557473 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaat 557408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 465
Target Start/End: Complemental strand, 562245 - 562180
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaat 465  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||    
T  562245 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaat 562180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 470
Target Start/End: Original strand, 1429496 - 1429561
Alignment:
Q  405 tcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 470  Q
    ||||||| |||||| |||| |||| || ||||||||||| ||| |||||||| ||||| |||||||    
T  1429496 tcaatataatatattttggtactcaattgagatatttttgtaccagatctaacatgtgtattactt 1429561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 470
Target Start/End: Complemental strand, 8771021 - 8770952
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 470  Q
    ||||| |||||||||||| || | || | || || |||||||| |||||||||| |||||||||||||||    
T  8771021 gtacttaatatgatatatttttgtacacaattgaaatatttttgtactagatctgatatgtgaattactt 8770952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 564
Target Start/End: Original strand, 24435564 - 24435637
Alignment:
Q  491 ttacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    ||||||||||||| ||| | |||| ||||||| | ||| |||||||||||||||||| ||| |  |||||||||    
T  24435564 ttacttgttcctaaagtctttcacttattagtagagaactttctctataaatagagagctctcacagtgcattc 24435637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 294
Target Start/End: Original strand, 23976422 - 23976466
Alignment:
Q  250 gatggatcacacactagtggtgtttatatagtgaggttgtacctc 294  Q
    ||||||||||||| ||||  |||||||||||||||| ||||||||    
T  23976422 gatggatcacacattagtaatgtttatatagtgagggtgtacctc 23976466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 56; Significance: 7e-23; HSPs: 3)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 147 - 294
Target Start/End: Original strand, 8764 - 8914
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 245  Q
    ||||| ||||||||||||||||||||||||| ||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  8764 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaaatcccac 8863  T
Q  246 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 294  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  8864 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 8914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 489 - 571
Target Start/End: Original strand, 9259 - 9341
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||||| ||||| |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  9259 aattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacac 9341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 433 - 481
Target Start/End: Original strand, 9229 - 9277
Alignment:
Q  433 gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  9229 gagatatttttgtactagatctaatatgagaattacttgctcctaaagt 9277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 7e-23; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 147 - 294
Target Start/End: Original strand, 31448747 - 31448897
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 245  Q
    ||||| ||||||||||||||||||||||||| ||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  31448747 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccac 31448846  T
Q  246 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 294  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  31448847 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 31448897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 412 - 611
Target Start/End: Complemental strand, 42972905 - 42972707
Alignment:
Q  412 gatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaattacttgttcctagagtttct 511  Q
    ||||||| |||| |||| || ||||||||||| |||| |||||||||||||||||||||| |   |||||||| |   ||| ||| |||| | |||||||    
T  42972905 gatatattttggtactcaattgagatatttttgtacttgatctaatatgtgaattacttaatgacaaagtaatgt---atttcttattcccaaagtttct 42972809  T
Q  512 cacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc--cagacacaagggttatattgagttgtcgagaactctttctctctt 609  Q
    ||| | ||||| |  ||||||||||||||||||| |  |||| ||||||||||  || ||| ||| ||| || ||||||||||| |||||||||||| ||    
T  42972808 cactttttagtgggaaattttctctataaatagatatttcacatagtgcattctacacacaaaagagttctagtgagttgtcgataactctttctctttt 42972709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 147 - 294
Target Start/End: Original strand, 4237224 - 4237373
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaa-agactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 245  Q
    ||||| |||||||||||||||||||||||| |||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  4237224 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccac 4237322  T
Q  246 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 294  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  4237323 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 4237373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 147 - 294
Target Start/End: Original strand, 4241963 - 4242112
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaa-agactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 245  Q
    ||||| |||||||||||||||||||||||| |||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  4241963 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccac 4242061  T
Q  246 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 294  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  4242062 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 4242112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 580 - 638
Target Start/End: Complemental strand, 7002296 - 7002238
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatt 638  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||    
T  7002296 tattgagttgtcgagaactctttctctgttctccctccagcttatgttaacgtgttatt 7002238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 489 - 571
Target Start/End: Original strand, 31449244 - 31449326
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  31449244 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacac 31449326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 489 - 566
Target Start/End: Original strand, 4237720 - 4237797
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattcca 566  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  |||||||||||    
T  4237720 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattcca 4237797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 489 - 566
Target Start/End: Original strand, 4242459 - 4242536
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattcca 566  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  |||||||||||    
T  4242459 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattcca 4242536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 481 - 544
Target Start/End: Complemental strand, 17153262 - 17153198
Alignment:
Q  481 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatag 544  Q
    |||||||| ||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||    
T  17153262 taatatgtgaattacttgttcccaaagtttctcacatattagttgtgatttttctctataaatag 17153198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 19393110 - 19393174
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  19393110 aattacttgttcccaaagtttctcacttattagttgtgaaatttctctataaatagagatctcac 19393174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 571
Target Start/End: Original strand, 8330742 - 8330824
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||| ||||| ||||    
T  8330742 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttccatacac 8330824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 489 - 546
Target Start/End: Original strand, 4582675 - 4582732
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 546  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||    
T  4582675 aattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagag 4582732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 489 - 566
Target Start/End: Original strand, 43302063 - 43302140
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattcca 566  Q
    ||||||||| ||| | |||||||||| ||||| ||||||| |||||||||||||||||| |||||  |||||||||||    
T  43302063 aattacttgctcccaaagtttctcacttattacttgtgaactttctctataaatagagagctcacacagtgcattcca 43302140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 16066596 - 16066660
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    |||||||||| || | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  16066596 aattacttgtccccaaagtttctcacctattagttgtgaagtttctctataaatagagagctcac 16066660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 553
Target Start/End: Complemental strand, 22104390 - 22104326
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||||| | |||||||||| |||||| |||||| |||||||||||||||||| |||||    
T  22104390 aattacttgttcccaaagtttctcacctattagctgtgaagtttctctataaatagagagctcac 22104326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 489 - 544
Target Start/End: Original strand, 17157431 - 17157486
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatag 544  Q
    |||||| |||||| | ||||||||||||||||||||||| ||||||||||||||||    
T  17157431 aattacgtgttcccaaagtttctcacatattagttgtgatttttctctataaatag 17157486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 401 - 470
Target Start/End: Complemental strand, 10934018 - 10933948
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcga-gatatttttatactagatctaatatgtgaattactt 470  Q
    ||||||||||||| |||| ||||||||| ||  | ||||||||| ||||||||||||||||||||||||||    
T  10934018 gtactcaatatgacatattttggcactcaatttaagatatttttgtactagatctaatatgtgaattactt 10933948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 506 - 564
Target Start/End: Original strand, 18861966 - 18862024
Alignment:
Q  506 gtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  18861966 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 18862024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 21411737 - 21411663
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| || | |||||||||||||||||||| | ||||||||||    
T  21411737 attacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcgcatagtgcattc 21411663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 21806229 - 21806155
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| || | |||||||||||||||||||| | ||||||||||    
T  21806229 attacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcgcatagtgcattc 21806155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 481
Target Start/End: Original strand, 4237657 - 4237738
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  4237657 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 4237738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 481
Target Start/End: Original strand, 4242396 - 4242477
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  4242396 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 4242477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 221 - 294
Target Start/End: Original strand, 8330335 - 8330408
Alignment:
Q  221 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 294  Q
    ||||||||||| |||||| ||||||||  ||||||||||||| |||| |||||||||||||  || ||||||||    
T  8330335 gaattgaaaaaagtgaaagtcccacatcggatggatcacacattagtagtgtttatatagtaggggtgtacctc 8330408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 490 - 563
Target Start/End: Complemental strand, 21384458 - 21384385
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcatt 563  Q
    |||||||||| | | |||||||||| |||||||||| || | ||||||||||||||||||||||  ||||||||    
T  21384458 attacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcatt 21384385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 490 - 563
Target Start/End: Complemental strand, 21387878 - 21387805
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcatt 563  Q
    |||||||||| | | |||||||||| |||||||||| || | ||||||||||||||||||||||  ||||||||    
T  21387878 attacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcatt 21387805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 584 - 629
Target Start/End: Original strand, 24672779 - 24672824
Alignment:
Q  584 gagttgtcgagaactctttctctcttctccctccagcttgtgttaa 629  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||    
T  24672779 gagttgtcgagaactatttctctcttctccctctagcttgtgttaa 24672824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 587 - 627
Target Start/End: Complemental strand, 2966268 - 2966228
Alignment:
Q  587 ttgtcgagaactctttctctcttctccctccagcttgtgtt 627  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  2966268 ttgtcgagaattctttctctcttctccctccagcttgtgtt 2966228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 553
Target Start/End: Complemental strand, 14036170 - 14036106
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||| ||||| | |||||||||||||||| | ||||||||| |||||||||||||| |||||    
T  14036170 aattactcgttcccaaagtttctcacatattaatcgtgaattttttctataaatagagagctcac 14036106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 37772406 - 37772358
Alignment:
Q  505 agtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  37772406 agtttctcacttattagttgtgaactttctctataaatagagagctcac 37772358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 580 - 615
Target Start/End: Original strand, 17953422 - 17953457
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccct 615  Q
    ||||||||||||||||||||||||||||||||||||    
T  17953422 tattgagttgtcgagaactctttctctcttctccct 17953457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 580 - 643
Target Start/End: Original strand, 23548066 - 23548129
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttct 643  Q
    |||||||| |||||||||||||||| ||||||| ||||| |||||||| ||| |||||| ||||    
T  23548066 tattgagtggtcgagaactctttctatcttctctctccaacttgtgttgacgagctattcttct 23548129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 581 - 648
Target Start/End: Complemental strand, 26779760 - 26779693
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttcttctca 648  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||||||| ||| | |||| |||| ||||    
T  26779760 attgagttgtcgataactctttctctcttctccatccggcttgtgttgacgagttattcttctcctca 26779693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 42973306 - 42973235
Alignment:
Q  146 atgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttg 217  Q
    |||||| ||||||||   |||||||||||||||||| ||||||||||| |||||  | ||||||||||||||    
T  42973306 atgttggaacatgtgcaaaaattgagttaaaagactatacacaaattcccacgttagaaagaattagtgttg 42973235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 564
Target Start/End: Original strand, 21827335 - 21827393
Alignment:
Q  506 gtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    ||||||||| |||||||||| |||  ||||||||||||||||||||||  |||||||||    
T  21827335 gtttctcacttattagttgtaaatgatctctataaatagagaactcacacagtgcattc 21827393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 489 - 547
Target Start/End: Original strand, 25367365 - 25367423
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagaga 547  Q
    ||||||||| ||| | |||||||||| || |||||||||| ||||||||||||||||||    
T  25367365 aattacttgatcccaaagtttctcacttactagttgtgaactttctctataaatagaga 25367423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 598 - 648
Target Start/End: Complemental strand, 28864009 - 28863959
Alignment:
Q  598 tctttctctcttctccctccagcttgtgttaacgtgctatttttcttctca 648  Q
    |||||||||||| ||||||||||||||||||||| |||||| |||| ||||    
T  28864009 tctttctctcttgtccctccagcttgtgttaacgagctattcttctcctca 28863959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 489 - 547
Target Start/End: Original strand, 34818085 - 34818143
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagaga 547  Q
    ||||||||| ||| | |||||||||  ||||||||||||| ||||||||||||||||||    
T  34818085 aattacttgctccgaaagtttctcagttattagttgtgaactttctctataaatagaga 34818143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 401 - 481
Target Start/End: Original strand, 31449181 - 31449262
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||| ||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  31449181 gtactcgatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 31449262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 648
Target Start/End: Original strand, 22714444 - 22714511
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttcttctca 648  Q
    ||||||||||||||||||||||||  | || ||||||||||||||||||||| | |||| |||| ||||    
T  22714444 tattgagttgtcgagaactctttcgttatt-tccctccagcttgtgttaacgagttattcttctcctca 22714511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 452
Target Start/End: Complemental strand, 22104443 - 22104392
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagat 452  Q
    |||||||||||||||||| |||| |||| || ||||||||||| ||||||||    
T  22104443 gtactcaatatgatatattttggtactcaattgagatatttttgtactagat 22104392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 470
Target Start/End: Original strand, 25367293 - 25367372
Alignment:
Q  392 atatctttcgtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattactt 470  Q
    |||| ||| ||||||||||| |||||| |||  |||| ||  ||||||||||| |||||||||||||||| |||||||||    
T  25367293 atatattttgtactcaatattatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattactt 25367372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 294
Target Start/End: Original strand, 43301638 - 43301776
Alignment:
Q  159 tgtggaaattgagtt-aaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatc 257  Q
    ||||||||||||||| ||||||||  |||||||||  ||  | ||| |||| |||||||||  ||||||||||| ||| || ||| ||||  |||||| |    
T  43301638 tgtggaaattgagttaaaaagactaaacacaaatttccatcttgggtagaactagtgttgtgtgaattgaaaaaagtggaagtcctacatcggatggaac 43301737  T
Q  258 ac--acactagtggtgtttatatagtgaggttgtacctc 294  Q
    ||  ||| |||| |||||||||||||| || ||||||||    
T  43301738 acatacattagtagtgtttatatagtgggggtgtacctc 43301776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Original strand, 15951002 - 15951036
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  15951002 attgagttgtcgggaactctttctctcttctccct 15951036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Complemental strand, 33417176 - 33417142
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  33417176 attgagttgtcgggaactctttctctcttctccct 33417142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Original strand, 38181692 - 38181726
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  38181692 attgagttgtcgggaactctttctctcttctccct 38181726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Original strand, 40125345 - 40125379
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  40125345 attgagttgtcgggaactctttctctcttctccct 40125379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 401 - 481
Target Start/End: Original strand, 43302002 - 43302081
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| ||||| |||||||||| ||||||||| |||| |||||    
T  43302002 gtactcaatatgatatattttg--actcaatttgagatatttttgtactaaatctaatatgagaattacttgctcccaaagt 43302081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 481
Target Start/End: Original strand, 8330679 - 8330760
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||| ||||||| |||  |||| ||  ||||||||||| ||||| |||||||||| ||||||||| |||| |||||    
T  8330679 gtactcaataagatatattttgagactcaatttgagatatttttgtactatatctaatatgagaattacttgctcccaaagt 8330760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 470
Target Start/End: Complemental strand, 17153283 - 17153246
Alignment:
Q  433 gagatatttttatactagatctaatatgtgaattactt 470  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  17153283 gagatatttttgtactaaatctaatatgtgaattactt 17153246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 481
Target Start/End: Original strand, 34818022 - 34818103
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||| ||||||| |||  |||| ||  ||||| ||||| |||||||||||||||| ||||||||| |||| |||||    
T  34818022 gtactcaataagatatattttgagactcaatttgagatgtttttgtactagatctaatatgagaattacttgctccgaaagt 34818103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 481 - 540
Target Start/End: Complemental strand, 10933964 - 10933904
Alignment:
Q  481 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataa 540  Q
    |||||||| ||||||||||| | | ||||||||||||||||| |||| ||||| |||||||    
T  10933964 taatatgtgaattacttgttaccaaagtttctcacatattagctgtggattttttctataa 10933904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 511 - 547
Target Start/End: Complemental strand, 15197331 - 15197295
Alignment:
Q  511 tcacatattagttgtgaattttctctataaatagaga 547  Q
    ||||||||||||||||||||| | |||||||||||||    
T  15197331 tcacatattagttgtgaatttacactataaatagaga 15197295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 580 - 612
Target Start/End: Complemental strand, 17794122 - 17794090
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctc 612  Q
    ||||||||| |||||||||||||||||||||||    
T  17794122 tattgagttatcgagaactctttctctcttctc 17794090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 401 - 449
Target Start/End: Original strand, 19393057 - 19393105
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatacta 449  Q
    |||||||||||||||||| |||| |||| || ||||||||||| |||||    
T  19393057 gtactcaatatgatatattttggtactcaattgagatatttttgtacta 19393105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 221 - 293
Target Start/End: Original strand, 25361679 - 25361750
Alignment:
Q  221 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacct 293  Q
    ||||||||||| ||| || ||||||||  ||||||||||||| |||| || ||||||||||| || |||||||    
T  25361679 gaattgaaaaa-gtggaagtcccacatcggatggatcacacattagtagtatttatatagtggggatgtacct 25361750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 294
Target Start/End: Complemental strand, 37772824 - 37772780
Alignment:
Q  250 gatggatcacacactagtggtgtttatatagtgaggttgtacctc 294  Q
    ||||||||||||| |||| |||||||||||||| || ||||||||    
T  37772824 gatggatcacacattagtagtgtttatatagtgggggtgtacctc 37772780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 1e-21; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 481 - 553
Target Start/End: Complemental strand, 1067205 - 1067132
Alignment:
Q  481 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    |||||||| |||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1067205 taatatgtgaattacgtgttcctaaagtttctcacttattagttgtgaattttctctataaatagagaactcac 1067132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 489 - 569
Target Start/End: Complemental strand, 14804219 - 14804139
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagac 569  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||| | ||||||| ||||    
T  14804219 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacgcaatgcattctagac 14804139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 481 - 547
Target Start/End: Complemental strand, 13894040 - 13893973
Alignment:
Q  481 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagaga 547  Q
    |||||||| ||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||    
T  13894040 taatatgtgaattacttgttcccaaagtttctcacttattagttgtgaattttctctataaatagaga 13893973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 580 - 643
Target Start/End: Complemental strand, 16036265 - 16036202
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttct 643  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||    
T  16036265 tattaagttgtcgagaactctttctctcttctccctccagcttgtgttgacgagctattcttct 16036202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 489 - 571
Target Start/End: Original strand, 40232767 - 40232849
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  40232767 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacac 40232849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 481 - 553
Target Start/End: Original strand, 17213814 - 17213887
Alignment:
Q  481 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    |||||||| ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  17213814 taatatgtgaattacttgttcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcac 17213887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 489 - 553
Target Start/End: Complemental strand, 14819687 - 14819623
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  14819687 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcac 14819623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 22428575 - 22428639
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  22428575 aattacttgttcccaaagtttctcacttattagttgtgaagtttctctataaatagagagctcac 22428639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 580 - 631
Target Start/End: Complemental strand, 12260637 - 12260586
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacg 631  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  12260637 tattgagttgttgagaactctttctctcttctcccttcagcttgtgttaacg 12260586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 571
Target Start/End: Complemental strand, 3094804 - 3094722
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||||| ||| | |||||||||| ||||||||||||| ||||||||||||||||||  ||||  ||||||||||| ||||    
T  3094804 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagttcacacagtgcattccacacac 3094722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 564
Target Start/End: Original strand, 39243403 - 39243477
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  39243403 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 39243477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 564
Target Start/End: Original strand, 39246958 - 39247032
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  39246958 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 39247032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 571
Target Start/End: Original strand, 41097337 - 41097419
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||| ||||| ||||    
T  41097337 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttccacacac 41097419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 564
Target Start/End: Original strand, 41387355 - 41387429
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  41387355 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 41387429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 489 - 546
Target Start/End: Original strand, 52100601 - 52100658
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 546  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||    
T  52100601 aattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagag 52100658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 545
Target Start/End: Original strand, 23285210 - 23285274
Alignment:
Q  481 taatatgtaattacttgttcctagagtttctcacatattagttgtgaattttctctataaataga 545  Q
    |||||| | |||||||||||| | || ||||||||||||| ||||||||||||||||||||||||    
T  23285210 taatatttgattacttgttcccaaaggttctcacatattaattgtgaattttctctataaataga 23285274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 579 - 638
Target Start/End: Complemental strand, 8138274 - 8138215
Alignment:
Q  579 atattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatt 638  Q
    ||||||||||||||||||||||||||||||||||| | |||||||| || ||| ||||||    
T  8138274 atattgagttgtcgagaactctttctctcttctccattcagcttgtattgacgagctatt 8138215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 623
Target Start/End: Complemental strand, 20107996 - 20107953
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttg 623  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  20107996 tattgagttgtcgagaactctttctctcttctccctgcagcttg 20107953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 506 - 564
Target Start/End: Original strand, 1924450 - 1924508
Alignment:
Q  506 gtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  1924450 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 1924508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 293
Target Start/End: Complemental strand, 3095300 - 3095152
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaa-agactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 245  Q
    ||||| |||||||||||||||||||||||| | |||  |||||||||  || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  3095300 tgttggaacatgtgtggaaattgagttaaacaaactaaacacaaatttccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccac 3095202  T
Q  246 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacct 293  Q
    ||  |||| | |||||||  |||| |||||||||||||| || |||||||    
T  3095201 atcggatgaaacacacacattagtagtgtttatatagtgggggtgtacct 3095152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 506 - 564
Target Start/End: Original strand, 20923464 - 20923522
Alignment:
Q  506 gtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  20923464 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 20923522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 481
Target Start/End: Complemental strand, 3094867 - 3094786
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  3094867 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 3094786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 546
Target Start/End: Complemental strand, 21498366 - 21498309
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 546  Q
    ||||||||||||| | |||||||||| ||||||||| ||| |||||||||||||||||    
T  21498366 aattacttgttcccaaagtttctcacctattagttgggaagtttctctataaatagag 21498309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 401 - 481
Target Start/End: Original strand, 19725223 - 19725303
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||||||||||||||||| |||| || | || ||||||||||| ||||| |||| |||| |||||||||| |||| |||||    
T  19725223 gtactcaatatgatatattttggtacacaattgagatatttttgtactatatctgatatttgaattacttgctcccaaagt 19725303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 580 - 615
Target Start/End: Complemental strand, 7882632 - 7882597
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccct 615  Q
    ||||||||||||||||||||||||||||||||||||    
T  7882632 tattgagttgtcgagaactctttctctcttctccct 7882597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 507 - 542
Target Start/End: Original strand, 39037047 - 39037082
Alignment:
Q  507 tttctcacatattagttgtgaattttctctataaat 542  Q
    ||||||||||||||||||||||||||||||||||||    
T  39037047 tttctcacatattagttgtgaattttctctataaat 39037082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 491 - 573
Target Start/End: Original strand, 23254568 - 23254650
Alignment:
Q  491 ttacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacacaa 573  Q
    ||||||||| ||| | |||||||||||||| || | ||||||||||||||||||||| | |||  ||||||||| | ||||||    
T  23254568 ttacttgtttctaaaatttctcacatattaattataaattttctctataaatagagagcacacaaagtgcattctacacacaa 23254650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 8273059 - 8273120
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaa 208  Q
    ||||||||||||||||||||||||||||||| | |  |||||||||| ||||| ||| ||||    
T  8273059 tgttgaaacatgtgtggaaattgagttaaaaaaataaacacaaattcccacgttgggtagaa 8273120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 401 - 470
Target Start/End: Complemental strand, 19727142 - 19727073
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 470  Q
    |||||||||||||||||| |||  || | || ||||| ||||| |||||||||| |||||||||||||||    
T  19727142 gtactcaatatgatatattttgaaacacaattgagatgtttttgtactagatctgatatgtgaattactt 19727073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 553
Target Start/End: Complemental strand, 2367758 - 2367694
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||||| | |||||||||| |||||| ||| ||  ||||||||||||||||| |||||    
T  2367758 aattacttgttcccaaagtttctcacctattagctgtaaagcttctctataaatagagagctcac 2367694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 16836612 - 16836680
Alignment:
Q  402 tactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 470  Q
    |||||||||| |||||| |||| |||| || ||||||||||| || || ||||||||||||| ||||||    
T  16836612 tactcaatataatatattttggtactcaattgagatatttttgtattatatctaatatgtgagttactt 16836680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 553
Target Start/End: Complemental strand, 26199073 - 26199009
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||||| | ||||| |||| | |||| |||||| |||||||||||||||||| |||||    
T  26199073 aattacttgttcccaaagtttttcaccttttagctgtgaagtttctctataaatagagagctcac 26199009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 564
Target Start/End: Original strand, 27308258 - 27308342
Alignment:
Q  481 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||| ||||| ||||||  | ||||||||  |||||||| |||||||||||||||||||||||  ||||| |||| |||||    
T  27308258 taatatgtgaattatttgttctcaaagtttctcttatattagtagtgaattttctctataaatagagtgctcacatagttcattc 27308342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 433 - 481
Target Start/End: Original strand, 40232737 - 40232785
Alignment:
Q  433 gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  40232737 gagatatttttgtactagatctaatatgagaattacttgctcccaaagt 40232785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 433 - 481
Target Start/End: Original strand, 41097307 - 41097355
Alignment:
Q  433 gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  41097307 gagatatttttgtactagatctaatatgagaattacttgctcccaaagt 41097355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 468
Target Start/End: Complemental strand, 1067246 - 1067191
Alignment:
Q  413 atatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattac 468  Q
    |||||| |||| |||| || ||||||||||  ||||||||||||||||||||||||    
T  1067246 atatattttggtactcaattgagatattttggtactagatctaatatgtgaattac 1067191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 452
Target Start/End: Complemental strand, 26199126 - 26199075
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagat 452  Q
    |||||||||||||||||| |||| |||| || ||||||||||| ||||||||    
T  26199126 gtactcaatatgatatattttggtactcaattgagatatttttgtactagat 26199075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 505 - 547
Target Start/End: Original strand, 8267247 - 8267289
Alignment:
Q  505 agtttctcacatattagttgtgaattttctctataaatagaga 547  Q
    ||||| |||| ||||||||||||| ||||||||||||||||||    
T  8267247 agtttatcacttattagttgtgaactttctctataaatagaga 8267289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Complemental strand, 16834120 - 16834086
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  16834120 attgagttgtcgggaactctttctctcttctccct 16834086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 522 - 564
Target Start/End: Original strand, 16836698 - 16836740
Alignment:
Q  522 ttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||||||||||||||||||| |||||  |||||||||    
T  16836698 ttgtgaattttctctataaatagagagctcacacagtgcattc 16836740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Original strand, 23192276 - 23192310
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  23192276 attgagttgtcgggaactctttctctcttctccct 23192310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Complemental strand, 25844400 - 25844366
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  25844400 attgagttgtcgggaactctttctctcttctccct 25844366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 322
Target Start/End: Complemental strand, 33055918 - 33055812
Alignment:
Q  221 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-----gggatgcataattaagt 315  Q
    |||||||||||  || || ||||||||  ||||||||||||| |||| ||||||||||||||  | |||||||  |||     ||||| |||||||||||    
T  33055918 gaattgaaaaaaatggaagtcccacatcggatggatcacacattagtagtgtttatatagtggaggtgtacctgtaattaatggggatacataattaagt 33055819  T
Q  316 gaacgaa 322  Q
    |||||||    
T  33055818 gaacgaa 33055812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Complemental strand, 38621353 - 38621319
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  38621353 attgagttgtcgggaactctttctctcttctccct 38621319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 470
Target Start/End: Complemental strand, 13894061 - 13894024
Alignment:
Q  433 gagatatttttatactagatctaatatgtgaattactt 470  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  13894061 gagatgtttttgtactagatctaatatgtgaattactt 13894024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 244
Target Start/End: Original strand, 14204446 - 14204546
Alignment:
Q  146 atgttgaaacatgtgtggaaattgagttaaaagacttt--acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattccc 243  Q
    |||||| |||||||||||||||||||| ||||| || |  ||||||||||| | || |||  ||| |||||||||  ||||||||||| ||| || ||||    
T  14204446 atgttggaacatgtgtggaaattgagtaaaaagtctataaacacaaattcttatgttgggtggaactagtgttgtgtgaattgaaaaaagtggaagtccc 14204545  T
Q  244 a 244  Q
    |    
T  14204546 a 14204546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 467
Target Start/End: Original strand, 27308210 - 27308271
Alignment:
Q  407 aatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaatta 467  Q
    |||||||||||| |||| |||| ||  ||||| ||||| |||||||||||||||||||||||    
T  27308210 aatatgatatattttggtactcaatttgagatgtttttgtactagatctaatatgtgaatta 27308271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 293
Target Start/End: Original strand, 40232345 - 40232418
Alignment:
Q  221 gaattgaaaaatgtgaaattcccacatgagatggatcacaca-ctagtggtgtttatatagtgaggttgtacct 293  Q
    ||||||||||| ||| || ||||||||  |||||||||||||  |||| |||||||||||||| || |||||||    
T  40232345 gaattgaaaaaagtggaagtcccacatcggatggatcacacatttagtagtgtttatatagtgggggtgtacct 40232418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 2384625 - 2384689
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||||| | |||||||||| |||||| | | ||  ||||||||||||||||| |||||    
T  2384625 aattacttgttcccaaagtttctcacctattagctctaaagcttctctataaatagagagctcac 2384689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 470
Target Start/End: Original strand, 8267202 - 8267238
Alignment:
Q  434 agatatttttatactagatctaatatgtgaattactt 470  Q
    |||||||||| |||||||||||||||| |||||||||    
T  8267202 agatatttttgtactagatctaatatgagaattactt 8267238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 580 - 648
Target Start/End: Complemental strand, 11806906 - 11806838
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttcttctca 648  Q
    ||||||||| | ||||||| |||||||||||| |||||| |||||||| | | |||||| |||| ||||    
T  11806906 tattgagttattgagaactatttctctcttcttcctccatcttgtgttgatgagctattcttctcctca 11806838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 581 - 613
Target Start/End: Original strand, 19798450 - 19798482
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctcc 613  Q
    |||||||||||| ||||||||||||||||||||    
T  19798450 attgagttgtcgggaactctttctctcttctcc 19798482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 581 - 613
Target Start/End: Complemental strand, 40166609 - 40166577
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctcc 613  Q
    |||||||||||| ||||||||||||||||||||    
T  40166609 attgagttgtcgggaactctttctctcttctcc 40166577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 3726 - 3790
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  3726 aattacttgttcctaaagtttctcacctattagttgtgaagtttctctataaatagagagctcac 3790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 19601 - 19665
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  19601 aattacttgttcctaaagtttctcacttattagttgtgaagtttctctataaatagagagctcac 19665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 46; Significance: 7e-17; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 147 - 264
Target Start/End: Complemental strand, 5877 - 5760
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 246  Q
    ||||| ||||||||||||||||||||||||| |||  |||||||||||||  |  || |||| |||||||||  |||||||||||  ||||| |||||||    
T  5877 tgttggaacatgtgtggaaattgagttaaaatactaaacacaaattctcatatttggtagaactagtgttgtgtgaattgaaaaaaatgaaagtcccaca 5778  T
Q  247 tgagatggatcacacact 264  Q
    | | ||||| ||||||||    
T  5777 tcaaatggaacacacact 5760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 7102 - 7028
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | ||||||| || |||||||||| || | ||||||||||||||||||||||  |||||||||    
T  7102 attacttgtttccaaagtttctaacttattagttgtaaactatctctataaatagagaactcacacagtgcattc 7028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 24675 - 24739
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  24675 aattacttgttcccaaagtttctcacttattagttgtgaaatttctctataaatagagagctcac 24739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 401 - 449
Target Start/End: Original strand, 24622 - 24670
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatacta 449  Q
    |||||||||||||||||| |||| |||| || ||||||||||| |||||    
T  24622 gtactcaatatgatatattttggtactcaattgagatatttttgtacta 24670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 45; Significance: 3e-16; HSPs: 3)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 49363 - 49427
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||| ||| | |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  49363 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagaactcac 49427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 276
Target Start/End: Original strand, 48895 - 48970
Alignment:
Q  201 gggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttat 276  Q
    |||||||| |||||| ||  ||||||||||| ||| || ||||||||  ||||||||||||| |||| ||||||||    
T  48895 gggaagaactagtgtagtgtgaattgaaaaaagtggaagtcccacatcggatggatcacacattagtagtgtttat 48970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 433 - 481
Target Start/End: Original strand, 49333 - 49381
Alignment:
Q  433 gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    ||||||||||| |||||||| ||||||| ||||||||| |||| |||||    
T  49333 gagatatttttgtactagatttaatatgagaattacttgctcccaaagt 49381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 489 - 553
Target Start/End: Complemental strand, 30399 - 30335
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  30399 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcac 30335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 45; Significance: 3e-16; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 489 - 553
Target Start/End: Complemental strand, 149271 - 149207
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||| ||| | |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  149271 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagaactcac 149207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 276
Target Start/End: Complemental strand, 149739 - 149664
Alignment:
Q  201 gggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttat 276  Q
    |||||||| |||||| ||  ||||||||||| ||| || ||||||||  ||||||||||||| |||| ||||||||    
T  149739 gggaagaactagtgtagtgtgaattgaaaaaagtggaagtcccacatcggatggatcacacattagtagtgtttat 149664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 433 - 481
Target Start/End: Complemental strand, 149301 - 149253
Alignment:
Q  433 gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    ||||||||||| |||||||| ||||||| ||||||||| |||| |||||    
T  149301 gagatatttttgtactagatttaatatgagaattacttgctcccaaagt 149253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 564
Target Start/End: Original strand, 10356 - 10430
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  10356 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 10430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 564
Target Start/End: Original strand, 10806 - 10880
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  10806 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 10880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 571
Target Start/End: Complemental strand, 30982 - 30900
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||||||| | | |||||||||| ||||||||||||| |||||||||||||||||| |||||  | ||||||| ||||||    
T  30982 aattacttgtttccaaagtttctcacttattagttgtgaaatttctctataaatagagagctcacacaatgcattcaagacac 30900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 564
Target Start/End: Original strand, 31965 - 32039
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  31965 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 32039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 7591 - 7517
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  7591 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 7517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 564
Target Start/End: Original strand, 13392 - 13466
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  13392 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 13466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 564
Target Start/End: Original strand, 21366 - 21440
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  21366 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 21440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 6)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 571
Target Start/End: Complemental strand, 59141 - 59059
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| ||||| || ||| ||||| ||||    
T  59141 aattacttgatcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacataatgctttccatacac 59059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 547
Target Start/End: Complemental strand, 63343 - 63285
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagaga 547  Q
    ||||||||| ||| | |||||||||| ||||||||||||| ||||||||||||||||||    
T  63343 aattacttgatcccaaagtttctcacttattagttgtgaactttctctataaatagaga 63285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 392 - 470
Target Start/End: Complemental strand, 59213 - 59134
Alignment:
Q  392 atatctttcgtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattactt 470  Q
    |||| ||| |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| |||||||||    
T  59213 atatattttgtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattactt 59134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 147 - 294
Target Start/End: Complemental strand, 59617 - 59472
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 246  Q
    ||||| ||||| |||||||||||||| ||  ||||  |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || |||||||    
T  59617 tgttggaacatatgtggaaattgagt-aattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaa-gtggaaatcccaca 59520  T
Q  247 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 294  Q
    |  ||||||||||||| ||||  ||||||||||||| || ||||||||    
T  59519 tcggatggatcacacattagtaatgtttatatagtgggggtgtacctc 59472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 392 - 470
Target Start/End: Complemental strand, 63415 - 63336
Alignment:
Q  392 atatctttcgtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattactt 470  Q
    |||| ||| |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| |||||||||    
T  63415 atatattttgtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattactt 63336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 147 - 294
Target Start/End: Complemental strand, 63819 - 63674
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 246  Q
    ||||| ||||| |||||||||||||| ||  ||||  |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || |||||||    
T  63819 tgttggaacatatgtggaaattgagt-aattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaa-gtggaaatcccaca 63722  T
Q  247 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 294  Q
    |  ||||||||||||| ||||  ||||||||||||| || ||||||||    
T  63721 tcggatggatcacacattagtaatgtttatatagtgggggtgtacctc 63674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 121280 - 121206
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  121280 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 121206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 489 - 546
Target Start/End: Original strand, 193646 - 193703
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 546  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||    
T  193646 aattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagag 193703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 187961 - 188014
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaata 543  Q
    ||||||||||||| | |||||||||| ||| ||||||||| ||||||||||||||    
T  187961 aattacttgttccaa-agtttctcacctatcagttgtgaagtttctctataaata 188014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1910 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 553
Target Start/End: Complemental strand, 581 - 517
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    |||||||||| || | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  581 aattacttgtccccaaagtttctcacctattagttgtgaagtttctctataaatagagagctcac 517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0932 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0932
Description:

Target: scaffold0932; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 491 - 571
Target Start/End: Original strand, 1020 - 1100
Alignment:
Q  491 ttacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 571  Q
    ||||||||||| | ||||||||||||||||||| ||| ||||||||||||||||  |  ||||||||| ||||||| ||||    
T  1020 ttacttgttcccaaagtttctcacatattagttatgatttttctctataaataggtagatcacgtagttcattccacacac 1100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 544
Target Start/End: Original strand, 5921 - 5985
Alignment:
Q  481 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatag 544  Q
    |||||||| ||||||||||||| | ||||||||||||||||||||||  ||||||||||||||||    
T  5921 taatatgtgaattacttgttccgaaagtttctcacatattagttgtgctttttctctataaatag 5985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 470
Target Start/End: Original strand, 5900 - 5937
Alignment:
Q  433 gagatatttttatactagatctaatatgtgaattactt 470  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  5900 gagatatttttgtactagatctaatatgtgaattactt 5937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0478 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 3)
Name: scaffold0478
Description:

Target: scaffold0478; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 544
Target Start/End: Complemental strand, 8311 - 8247
Alignment:
Q  481 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatag 544  Q
    |||||||| ||||||||||||| | ||||||||||||||||||| ||| ||||||||||||||||    
T  8311 taatatgtgaattacttgttcccaaagtttctcacatattagttatgatttttctctataaatag 8247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0478; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 470
Target Start/End: Complemental strand, 8332 - 8295
Alignment:
Q  433 gagatatttttatactagatctaatatgtgaattactt 470  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  8332 gagatatttttgtactagatctaatatgtgaattactt 8295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0478; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 436 - 470
Target Start/End: Complemental strand, 2951 - 2917
Alignment:
Q  436 atatttttatactagatctaatatgtgaattactt 470  Q
    |||||||| ||||||||||||||||||||||||||    
T  2951 atatttttgtactagatctaatatgtgaattactt 2917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 5)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 47352 - 47416
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  47352 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcac 47416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 52296 - 52360
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  52296 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcac 52360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 433 - 481
Target Start/End: Original strand, 47322 - 47370
Alignment:
Q  433 gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  47322 gagatatttttgtactagatctaatatgagaattacttgctcccaaagt 47370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 326
Target Start/End: Original strand, 51796 - 51979
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 246  Q
    ||||| ||||| |||| ||||||||| ||  ||||  |||||||||| |||   ||| ||||||||||| ||  ||||||||||| ||| || || |||     
T  51796 tgttggaacatatgtgaaaattgagt-aattgactaaacacaaattcccacaatgggtagaattagtgtagtgtgaattgaaaaaagtggaagtcacacg 51894  T
Q  247 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-----gggatgcataattaagtgaacgaagtaa 326  Q
    |  ||||||||||||| |||| |||||||||||||  || |||||||| |||     ||| | |||||||| |||||||||||||    
T  51895 tcggatggatcacacattagtagtgtttatatagtaggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaa 51979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 433 - 481
Target Start/End: Original strand, 52266 - 52314
Alignment:
Q  433 gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  52266 gagatatttttgtactagatctaatatgagaattacttgctcccaaagt 52314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 577 - 648
Target Start/End: Complemental strand, 4620 - 4550
Alignment:
Q  577 ttatattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttcttctca 648  Q
    |||||||||||| |||||||||||||||||||||| |||||| |||||||| ||| |||||| |||| ||||    
T  4620 ttatattgagttttcgagaactctttctctcttct-cctccaacttgtgttgacgagctattcttctcctca 4550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 490 - 564
Target Start/End: Original strand, 12348 - 12422
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| || | ||||||||||||||||||||||  |||||||||    
T  12348 attacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattc 12422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 490 - 564
Target Start/End: Original strand, 14857 - 14931
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| || | ||||||||||||||||||||||  |||||||||    
T  14857 attacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattc 14931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 506 - 564
Target Start/End: Complemental strand, 1186 - 1128
Alignment:
Q  506 gtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  1186 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 392 - 481
Target Start/End: Original strand, 547 - 637
Alignment:
Q  392 atatctttcgtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 481  Q
    |||| ||| |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  547 atatattttgtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 490 - 546
Target Start/End: Complemental strand, 64874 - 64818
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 546  Q
    |||||||||||| | |||||||||| ||||||||| ||| |||||||||||||||||    
T  64874 attacttgttcccaaagtttctcacctattagttgggaagtttctctataaatagag 64818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 490 - 546
Target Start/End: Complemental strand, 81272 - 81216
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 546  Q
    |||||||||||| | |||||||||| ||||||||| ||| |||||||||||||||||    
T  81272 attacttgttcccaaagtttctcacctattagttgggaagtttctctataaatagag 81216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 37; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 326
Target Start/End: Original strand, 34605 - 34788
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 246  Q
    ||||| ||||| |||||||||||||| ||  ||||  |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || |||||||    
T  34605 tgttggaacatatgtggaaattgagt-aattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccaca 34703  T
Q  247 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-----gggatgcataattaagtgaacgaagtaa 326  Q
    |   |||||||||||| || | |||||||||||||| || |||||||| |||     ||| | |||||||| |||||||||||||    
T  34704 tcgtatggatcacacattaatagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaa 34788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 401 - 480
Target Start/End: Original strand, 35020 - 35100
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaag 480  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| ||||| |||||||||| ||||||||| |||| ||||    
T  35020 gtactcaatatgatatattttgagactcaatttgagatatttttgtactatatctaatatgagaattacttgctcccaaag 35100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 35083 - 35147
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    ||||||||| ||| | || || |||| ||||||||||||| |||||||||||||||||| |||||    
T  35083 aattacttgctcccaaagcttgtcacttattagttgtgaactttctctataaatagagagctcac 35147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 580 - 643
Target Start/End: Complemental strand, 5874 - 5811
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttct 643  Q
    |||||||||||||| ||||||||||||||||||||| || |||||| | ||| |||||| ||||    
T  5874 tattgagttgtcgataactctttctctcttctccctgcatcttgtggtgacgagctattgttct 5811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000006; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 505 - 564
Target Start/End: Complemental strand, 127102 - 127043
Alignment:
Q  505 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| |||||||||| || | ||||||||||||||||||||||  |||||||||    
T  127102 agtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattc 127043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 580 - 615
Target Start/End: Original strand, 145871 - 145906
Alignment:
Q  580 tattgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||||| |||||||||||||||||||||    
T  145871 tattgagttgtcgataactctttctctcttctccct 145906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 470
Target Start/End: Complemental strand, 127180 - 127111
Alignment:
Q  401 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 470  Q
    ||||| ||||| |||||| ||||||||| || |||||||||   |||||||||||||| ||| |||||||    
T  127180 gtacttaatataatatattttggcactcaattgagatatttaagtactagatctaataggtgcattactt 127111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 490 - 564
Target Start/End: Original strand, 35391 - 35465
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| |||||||||| ||   ||||||||||||||||||||||  |||||||||    
T  35391 attacttgtttccaaagtttctcacttattagttgtaaacaatctctataaatagagaactcacacagtgcattc 35465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 22021 - 21947
Alignment:
Q  490 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||||| | | |||||||||| ||| |||||| || | ||||||||||||||||||||||  |||||||||    
T  22021 attacttgtttccaaagtttctcacttataagttgtaaactatctctataaatagagaactcacacagtgcattc 21947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 221 - 293
Target Start/End: Complemental strand, 8051 - 7980
Alignment:
Q  221 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacct 293  Q
    ||||||||||| ||| || ||||||||  ||||||||||||| ||||||| ||||||||||| || |||||||    
T  8051 gaattgaaaaa-gtggaagtcccacatcggatggatcacacattagtggtatttatatagtggggatgtacct 7980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 553
Target Start/End: Complemental strand, 199905 - 199841
Alignment:
Q  489 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 553  Q
    |||||||||| || |  ||||||||| ||||||||| ||| |||||||||||||||||| |||||    
T  199905 aattacttgtccccaatgtttctcacctattagttgcgaagtttctctataaatagagagctcac 199841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 564
Target Start/End: Complemental strand, 7866 - 7807
Alignment:
Q  505 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 564  Q
    |||||||| | |||||||||| || | ||||||||||||||||||||||  |||||||||    
T  7866 agtttctcgcttattagttgtaaactatctctataaatagagaactcacacagtgcattc 7807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 615
Target Start/End: Complemental strand, 4709 - 4675
Alignment:
Q  581 attgagttgtcgagaactctttctctcttctccct 615  Q
    |||||||||||| ||||||||||||||||||||||    
T  4709 attgagttgtcgggaactctttctctcttctccct 4675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 562
Target Start/End: Original strand, 5276 - 5333
Alignment:
Q  505 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcat 562  Q
    |||||||||| |||||||||| || | || |||||||||||||||||||  |||||||    
T  5276 agtttctcacttattagttgtaaactatccctataaatagagaactcacacagtgcat 5333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 8763 - 8718
Alignment:
Q  147 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaatt 192  Q
    |||||||||||||||||||||||| |||||| |||  |||||||||    
T  8763 tgttgaaacatgtgtggaaattgaattaaaatactaaacacaaatt 8718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University