View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7447_low_9 (Length: 336)

Name: NF7447_low_9
Description: NF7447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7447_low_9
NF7447_low_9
[»] chr3 (32 HSPs)
chr3 (94-321)||(6285828-6286050)
chr3 (19-73)||(6462361-6462415)
chr3 (19-73)||(13893875-13893929)
chr3 (19-73)||(25294909-25294963)
chr3 (19-73)||(45877403-45877457)
chr3 (20-73)||(35315905-35315958)
chr3 (28-72)||(49543469-49543513)
chr3 (19-73)||(11687213-11687267)
chr3 (19-73)||(15320135-15320189)
chr3 (19-73)||(31072827-31072881)
chr3 (19-73)||(35923727-35923781)
chr3 (19-73)||(42412878-42412932)
chr3 (31-73)||(48341969-48342011)
chr3 (19-73)||(49082773-49082827)
chr3 (19-73)||(51683058-51683112)
chr3 (31-73)||(54261175-54261217)
chr3 (20-73)||(29127868-29127921)
chr3 (19-68)||(29135867-29135916)
chr3 (33-73)||(30735063-30735103)
chr3 (26-73)||(32873659-32873706)
chr3 (35-73)||(10855333-10855371)
chr3 (27-73)||(22405655-22405701)
chr3 (19-73)||(26207905-26207959)
chr3 (19-73)||(40944832-40944886)
chr3 (19-73)||(41630616-41630670)
chr3 (31-73)||(46529986-46530028)
chr3 (31-73)||(47471781-47471823)
chr3 (19-72)||(6286075-6286128)
chr3 (20-73)||(10040506-10040559)
chr3 (20-73)||(29762260-29762313)
chr3 (31-68)||(39849026-39849063)
chr3 (20-72)||(10043100-10043152)
[»] chr5 (24 HSPs)
chr5 (20-73)||(24498933-24498986)
chr5 (19-73)||(18136383-18136437)
chr5 (19-73)||(19572674-19572728)
chr5 (19-73)||(30349529-30349583)
chr5 (29-73)||(23383598-23383642)
chr5 (19-73)||(1538381-1538435)
chr5 (19-73)||(5732023-5732077)
chr5 (19-73)||(6767154-6767208)
chr5 (19-73)||(9812822-9812876)
chr5 (19-73)||(12704964-12705018)
chr5 (19-73)||(12766081-12766135)
chr5 (19-73)||(20692883-20692937)
chr5 (19-73)||(41163562-41163616)
chr5 (31-72)||(35403627-35403668)
chr5 (20-72)||(42861322-42861374)
chr5 (30-73)||(7308478-7308521)
chr5 (19-73)||(3654015-3654069)
chr5 (19-73)||(8513469-8513523)
chr5 (31-69)||(25417298-25417336)
chr5 (19-73)||(28856927-28856981)
chr5 (19-73)||(28857078-28857132)
chr5 (19-73)||(39728337-39728391)
chr5 (20-73)||(20525788-20525841)
chr5 (19-71)||(1898953-1899005)
[»] chr8 (22 HSPs)
chr8 (22-73)||(22810033-22810084)
chr8 (19-73)||(2467221-2467275)
chr8 (19-73)||(44893381-44893435)
chr8 (19-72)||(13085478-13085531)
chr8 (31-73)||(583767-583809)
chr8 (19-73)||(6100425-6100479)
chr8 (19-73)||(8141055-8141109)
chr8 (27-73)||(10535514-10535560)
chr8 (19-73)||(14666174-14666228)
chr8 (19-73)||(24938665-24938719)
chr8 (19-73)||(38922517-38922571)
chr8 (26-73)||(9860106-9860153)
chr8 (26-73)||(34846767-34846814)
chr8 (19-73)||(1013080-1013134)
chr8 (19-73)||(24837195-24837249)
chr8 (19-73)||(29933726-29933780)
chr8 (31-73)||(33401914-33401956)
chr8 (20-73)||(3418617-3418670)
chr8 (20-73)||(6940511-6940564)
chr8 (20-65)||(7673758-7673803)
chr8 (20-73)||(16893890-16893943)
chr8 (17-73)||(17845686-17845742)
[»] chr4 (34 HSPs)
chr4 (19-73)||(41339498-41339552)
chr4 (19-73)||(34667705-34667759)
chr4 (17-73)||(38165981-38166037)
chr4 (26-73)||(1940884-1940931)
chr4 (19-73)||(1446780-1446834)
chr4 (19-73)||(8888976-8889030)
chr4 (19-73)||(13073492-13073546)
chr4 (19-73)||(19651548-19651602)
chr4 (19-73)||(29895741-29895795)
chr4 (31-73)||(52950036-52950078)
chr4 (20-73)||(13552068-13552121)
chr4 (19-73)||(5472951-5473005)
chr4 (19-73)||(6032743-6032797)
chr4 (19-73)||(6779165-6779219)
chr4 (19-73)||(27248382-27248436)
chr4 (19-73)||(33647675-33647729)
chr4 (19-73)||(38075387-38075441)
chr4 (19-73)||(53599014-53599068)
chr4 (20-73)||(15829653-15829706)
chr4 (17-73)||(24166404-24166460)
chr4 (26-73)||(41162992-41163039)
chr4 (31-73)||(2559261-2559303)
chr4 (31-73)||(3574561-3574603)
chr4 (19-73)||(15732551-15732605)
chr4 (17-55)||(20128281-20128319)
chr4 (26-72)||(33109277-33109323)
chr4 (19-73)||(47078412-47078466)
chr4 (19-73)||(55920988-55921042)
chr4 (19-72)||(295635-295688)
chr4 (19-64)||(36262868-36262913)
chr4 (30-74)||(7741878-7741922)
chr4 (17-73)||(8064899-8064954)
chr4 (21-73)||(14567205-14567257)
chr4 (19-55)||(38168229-38168265)
[»] chr7 (27 HSPs)
chr7 (20-73)||(14650269-14650322)
chr7 (19-73)||(42032048-42032102)
chr7 (19-73)||(48804635-48804689)
chr7 (20-73)||(9685691-9685744)
chr7 (27-73)||(1797412-1797458)
chr7 (19-73)||(4195305-4195359)
chr7 (27-73)||(4228862-4228908)
chr7 (19-73)||(17748485-17748539)
chr7 (19-73)||(43925464-43925518)
chr7 (19-55)||(10047979-10048015)
chr7 (29-73)||(45960115-45960159)
chr7 (19-54)||(1605912-1605947)
chr7 (31-73)||(19914817-19914859)
chr7 (31-73)||(22268144-22268186)
chr7 (31-73)||(22973919-22973961)
chr7 (19-73)||(34659178-34659232)
chr7 (19-73)||(39420790-39420844)
chr7 (19-73)||(43346882-43346936)
chr7 (19-73)||(43862075-43862129)
chr7 (31-73)||(45447922-45447964)
chr7 (19-73)||(47341828-47341882)
chr7 (20-73)||(11607083-11607136)
chr7 (20-73)||(22993471-22993524)
chr7 (20-68)||(13845320-13845368)
chr7 (19-67)||(16802081-16802129)
chr7 (19-67)||(18785627-18785675)
chr7 (17-65)||(21530708-21530756)
[»] chr1 (33 HSPs)
chr1 (20-73)||(8905255-8905308)
chr1 (17-73)||(2981033-2981089)
chr1 (19-73)||(5855472-5855526)
chr1 (19-73)||(11397992-11398046)
chr1 (19-73)||(33418219-33418273)
chr1 (19-73)||(41663960-41664014)
chr1 (19-73)||(2567226-2567280)
chr1 (19-73)||(10173075-10173129)
chr1 (19-73)||(31576651-31576705)
chr1 (19-73)||(49078064-49078118)
chr1 (32-73)||(32151039-32151080)
chr1 (20-73)||(46929842-46929895)
chr1 (20-73)||(48798175-48798228)
chr1 (20-55)||(10336484-10336519)
chr1 (31-73)||(32821-32863)
chr1 (19-73)||(892401-892455)
chr1 (19-73)||(10422738-10422792)
chr1 (19-73)||(18915817-18915871)
chr1 (35-73)||(31152666-31152704)
chr1 (19-65)||(34334399-34334445)
chr1 (19-73)||(34877940-34877994)
chr1 (19-73)||(40288581-40288635)
chr1 (27-73)||(41743223-41743269)
chr1 (19-73)||(47313002-47313056)
chr1 (20-73)||(5063948-5064001)
chr1 (20-73)||(8763941-8763994)
chr1 (19-68)||(9853381-9853430)
chr1 (20-73)||(50503466-50503519)
chr1 (17-73)||(12036846-12036902)
chr1 (19-55)||(16956434-16956470)
chr1 (37-73)||(25165352-25165388)
chr1 (20-52)||(33004120-33004152)
chr1 (17-65)||(34719734-34719782)
[»] chr2 (30 HSPs)
chr2 (17-73)||(29422164-29422220)
chr2 (17-73)||(38005351-38005407)
chr2 (19-73)||(7747223-7747277)
chr2 (19-73)||(21180417-21180471)
chr2 (19-73)||(21286393-21286447)
chr2 (20-73)||(8410080-8410133)
chr2 (17-73)||(44945543-44945599)
chr2 (19-73)||(10046579-10046633)
chr2 (19-73)||(20963212-20963266)
chr2 (31-73)||(24179520-24179562)
chr2 (20-73)||(2550817-2550870)
chr2 (19-72)||(19976910-19976963)
chr2 (16-73)||(22593084-22593141)
chr2 (30-70)||(32028365-32028405)
chr2 (19-73)||(3643990-3644044)
chr2 (19-73)||(6358254-6358308)
chr2 (19-73)||(12864173-12864227)
chr2 (19-73)||(14853470-14853524)
chr2 (31-73)||(18902645-18902687)
chr2 (19-73)||(34356155-34356209)
chr2 (31-73)||(39201623-39201665)
chr2 (27-73)||(42770762-42770808)
chr2 (31-72)||(2528456-2528497)
chr2 (31-72)||(34722631-34722672)
chr2 (31-68)||(41032020-41032057)
chr2 (29-73)||(23500794-23500838)
chr2 (17-69)||(25549681-25549733)
chr2 (19-59)||(41187672-41187712)
chr2 (27-55)||(41187816-41187844)
chr2 (19-55)||(41220602-41220638)
[»] scaffold0006 (1 HSPs)
scaffold0006 (26-73)||(68469-68516)
[»] scaffold0002 (2 HSPs)
scaffold0002 (19-73)||(522-576)
scaffold0002 (19-65)||(319382-319428)
[»] chr6 (19 HSPs)
chr6 (19-73)||(10311572-10311626)
chr6 (19-73)||(13468886-13468940)
chr6 (19-73)||(21898601-21898655)
chr6 (19-73)||(2271404-2271458)
chr6 (19-73)||(8612077-8612131)
chr6 (19-73)||(14107461-14107515)
chr6 (31-73)||(19230672-19230714)
chr6 (19-73)||(24671969-24672023)
chr6 (31-73)||(29333253-29333295)
chr6 (20-73)||(13036108-13036161)
chr6 (19-55)||(6606200-6606236)
chr6 (30-73)||(3030732-3030775)
chr6 (18-73)||(8938664-8938719)
chr6 (19-73)||(3588048-3588102)
chr6 (19-73)||(5253326-5253380)
chr6 (31-73)||(9179851-9179893)
chr6 (19-73)||(21016854-21016908)
chr6 (26-68)||(29444875-29444917)
chr6 (29-73)||(15643941-15643985)
[»] scaffold0005 (2 HSPs)
scaffold0005 (20-73)||(271178-271231)
scaffold0005 (21-73)||(250118-250170)
[»] scaffold0016 (1 HSPs)
scaffold0016 (29-73)||(8823-8867)
[»] scaffold0332 (1 HSPs)
scaffold0332 (19-73)||(15283-15337)
[»] scaffold0209 (1 HSPs)
scaffold0209 (31-73)||(12527-12569)
[»] scaffold0029 (1 HSPs)
scaffold0029 (31-73)||(40996-41038)
[»] scaffold0010 (1 HSPs)
scaffold0010 (31-73)||(25899-25941)
[»] scaffold0384 (1 HSPs)
scaffold0384 (17-73)||(5925-5981)


Alignment Details
Target: chr3 (Bit Score: 196; Significance: 1e-106; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 94 - 321
Target Start/End: Complemental strand, 6286050 - 6285828
Alignment:
Q  94 gttgacaatgaacataatatatgtatatttgtttgcacttcaagccggccgaagcatcttttgaaaatttgcttatgacatcttcaatgtcatctcatct 193  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  6286050 gttgacaatggacataatatatgtatatttgtttgcacttcaagccggccgaagcatcttttgaaaatttgcttatgacatcttcaatgtcatctcat-- 6285953  T
Q  194 catataaacttaactttagtaattaaacttaccatatttagtgctcaaagaaaagcacatacaccaataatttcacaacacattgtatattgcagtcaca 293  Q
       |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6285952 ---ataaacttaactttagtaattatacttaccatatttagtgctcaaagaaaagcgcatacaccaataatttcacaacacattgtatattgcagtcaca 6285856  T
Q  294 gtcattttttgtcaatctctaatgatgt 321  Q
    ||||||||||||||||||||||||||||    
T  6285855 gtcattttttgtcaatctctaatgatgt 6285828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 6462415 - 6462361
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| || ||||||||||||||||||||||||||| |||||||||||| ||||    
T  6462415 gtattccccagatacgtccttggaaggagctccttgccactagagcccaagcaac 6462361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 13893929 - 13893875
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| ||||| |||||||||||||||||||||||| ||| |||||||||||||    
T  13893929 gtattccccggacacgtccttggaaggagctccttgccactggagcccaaacaac 13893875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 25294963 - 25294909
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  25294963 gtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaac 25294909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 45877457 - 45877403
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||||||||||||||||||| ||||||||| ||| |||||||||||||    
T  45877457 gtattccccggatacgtccttggaaggggctccttgccactggagcccaaacaac 45877403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 35315958 - 35315905
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||| |||||||||||||||||||| |||| ||| |||||||||||||    
T  35315958 tattctccgggtacgtccttggaaggagctctttgccactggagcccaaacaac 35315905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 49543513 - 49543469
Alignment:
Q  28 ggatacgtccttggaaggagctccttgctactagagcccaaacaa 72  Q
    |||||||||||||||||||||||||||| |||| |||||||||||    
T  49543513 ggatacgtccttggaaggagctccttgccactaaagcccaaacaa 49543469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 11687213 - 11687267
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||| | ||||||||||||||||||| ||||| ||| |||||||||||||    
T  11687213 gtattctccaggtacgtccttggaaggagcttcttgccactggagcccaaacaac 11687267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 15320189 - 15320135
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||||||||||||||||||||||||| ||| ||| |||||||||    
T  15320189 gtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaac 15320135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 31072881 - 31072827
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||| |||||||||| |||||||||||||| | | |||||||||||||    
T  31072881 gtattctccgggtacgtccttgaaaggagctccttgccattggagcccaaacaac 31072827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 35923727 - 35923781
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||| | ||||||||||||| |||||| |||| |||||||||||||||||    
T  35923727 gtattctccaggtacgtccttggaatgagctcattgccactagagcccaaacaac 35923781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 42412878 - 42412932
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||||||||||||||||||||||||||||| | | |||||||| ||||    
T  42412878 gtattccccggatacgtccttggaaggagctccttgccattggagcccaagcaac 42412932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 48342011 - 48341969
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  48342011 tacgtccttggaaggagctccttgccactggagcccaaacaac 48341969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 49082827 - 49082773
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||||||||||||| ||||||||||| ||| ||| |||||||||||||    
T  49082827 gtattccccggatacgtccttagaaggagctccctgccactggagcccaaacaac 49082773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 51683058 - 51683112
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| ||||||||||| ||||||||||||||| || ||| |||||||||||||    
T  51683058 gtattccccggatacgtctttggaaggagctcctcgccactggagcccaaacaac 51683112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 54261217 - 54261175
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  54261217 tacgtccttggaaggagctccttgccactggagcccaaacaac 54261175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 29127921 - 29127868
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||| || |||||||||||||||||| |||||||| ||| |||||||||||||    
T  29127921 tattccccagatacgtccttggaaggatctccttgccactggagcccaaacaac 29127868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 29135916 - 29135867
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaa 68  Q
    |||||| ||||||||||||||||||| |||||||||| ||| ||||||||    
T  29135916 gtattccccggatacgtccttggaagaagctccttgccactggagcccaa 29135867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 30735063 - 30735103
Alignment:
Q  33 cgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||| ||||||||||| |||||||||||||||||    
T  30735063 cgtccttggaatgagctccttgccactagagcccaaacaac 30735103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 32873659 - 32873706
Alignment:
Q  26 ccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||| ||||||||||||| ||||||||||| ||| |||||||||||||    
T  32873659 ccgggtacgtccttggaatgagctccttgccactggagcccaaacaac 32873706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 10855371 - 10855333
Alignment:
Q  35 tccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  10855371 tccttggaaggagctccttgccactggagcccaaacaac 10855333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 22405655 - 22405701
Alignment:
Q  27 cggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||| |||| ||||||||||||| ||| |||||||||||||    
T  22405655 cggatacgtcattggtaggagctccttgccactggagcccaaacaac 22405701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 26207905 - 26207959
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||| ||||||||||||||||||||| ||| |||||||| ||||    
T  26207905 gtattccccgggtacatccttggaaggagctccttgccactggagcccaagcaac 26207959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 40944886 - 40944832
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||| |||||||||||||||||||||| ||||| ||  |||||||| ||||    
T  40944886 gtattctctggatacgtccttggaaggagcttcttgccaccggagcccaagcaac 40944832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 41630616 - 41630670
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||| ||||| ||||||| ||||||||||||||||  ||| |||||||||||||    
T  41630616 gtattttccggttacgtccatggaaggagctccttgtcactggagcccaaacaac 41630670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 46529986 - 46530028
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||| |||||||||||||| ||| |||||||||||||    
T  46529986 tacgtccttgaaaggagctccttgccactggagcccaaacaac 46530028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 47471823 - 47471781
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||||||||||||| |||| |||||||||||| ||||    
T  47471823 tacgtccttggaaggagctctttgccactagagcccaagcaac 47471781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 6286128 - 6286075
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaa 72  Q
    |||||| || ||||| ||||||||||||||||||||  |||| |||||||||||    
T  6286128 gtattcccctgatacttccttggaaggagctccttgtcactaaagcccaaacaa 6286075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 10040559 - 10040506
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||| |||| ||||||||| ||||||||||||||| ||| |||||||| ||||    
T  10040559 tattccccgggtacgtccttagaaggagctccttgccactggagcccaagcaac 10040506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 29762260 - 29762313
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||| ||| |||| ||||||||||||||||||||| ||| |||||||| ||||    
T  29762260 tattccccgaatacatccttggaaggagctccttgccactggagcccaagcaac 29762313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 39849063 - 39849026
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaa 68  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  39849063 tacgtccttggaaggagctccttgccactggagcccaa 39849026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 10043152 - 10043100
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaa 72  Q
    ||||| ||||||||||||||| ||||||||| |||| | | ||||||||||||    
T  10043152 tattccccggatacgtccttgaaaggagctcattgccagtggagcccaaacaa 10043100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 24498986 - 24498933
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24498986 tattctccagatacgtccttggaaggagctccttgctactagagcccaaacaac 24498933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 18136383 - 18136437
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||||||||||| |||||||||||||||||| ||| |||||||||||||    
T  18136383 gtattctccggatacgtctttggaaggagctccttgccactggagcccaaacaac 18136437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 19572728 - 19572674
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  19572728 gtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaac 19572674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 30349583 - 30349529
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| ||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  30349583 gtattccccggatacgtccttggaaggaactccttgccactggagcccaaacaac 30349529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 23383642 - 23383598
Alignment:
Q  29 gatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||    
T  23383642 gatacgtccttggaaggagctccttgccactggagcccaaacaac 23383598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 1538435 - 1538381
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| ||| ||||||||| |||||||||||||||| ||| |||||||||||||    
T  1538435 gtattccccgaatacgtcctcggaaggagctccttgccactggagcccaaacaac 1538381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 5732023 - 5732077
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||||||||||||||||||||||||| ||| |||||||| ||||    
T  5732023 gtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaac 5732077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 6767154 - 6767208
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||||||||||||||||||||||||| ||| |||||||| ||||    
T  6767154 gtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaac 6767208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 9812876 - 9812822
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||||||||||||||||||||||||| ||| ||| |||||||||    
T  9812876 gtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaac 9812822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 12705018 - 12704964
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||||||||||||||||||||||||| ||| ||| |||||||||    
T  12705018 gtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaac 12704964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 12766135 - 12766081
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||||||||||||||||||||||||| ||| ||| |||||||||    
T  12766135 gtattccccgggtacgtccttggaaggagctccttgccactcgagtccaaacaac 12766081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 20692937 - 20692883
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| |||||||||||||| ||||| |||| |||||||||||||||||    
T  20692937 gtattccccgggtacgtccttggaagaagctctttgccactagagcccaaacaac 20692883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 41163562 - 41163616
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||||| ||||||||||||||||||| ||| |||||||||||||    
T  41163562 gtattccccgggtacgttcttggaaggagctccttgccactggagcccaaacaac 41163616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 35403627 - 35403668
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaa 72  Q
    ||||||||||||||||||||||||| ||| ||||||||||||    
T  35403627 tacgtccttggaaggagctccttgccactggagcccaaacaa 35403668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 42861322 - 42861374
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaa 72  Q
    ||||| ||||||| |||||||||| ||||||||||| ||| ||||||||||||    
T  42861322 tattccccggatatgtccttggaatgagctccttgccactggagcccaaacaa 42861374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 7308478 - 7308521
Alignment:
Q  30 atacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||||||| ||||||||||| |||||| ||||||||||    
T  7308478 atacgtccttggaatgagctccttgccactagaacccaaacaac 7308521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 3654015 - 3654069
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||| ||||||||||||| |||||| |||  ||| |||||||||||||    
T  3654015 gtattctccgggtacgtccttggaaagagctcattgtcactggagcccaaacaac 3654069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 8513523 - 8513469
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||||||||||||||||||||||||| ||| ||| |||| ||||    
T  8513523 gtattccccgggtacgtccttggaaggagctccttgccacttgagtccaagcaac 8513469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 25417298 - 25417336
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaa 69  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  25417298 tacgtccttggaaggagctccttgccactggagcccaaa 25417336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 28856981 - 28856927
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| | ||||||||||||||||||||||| ||| |||||||| ||||    
T  28856981 gtattccccgggtgcgtccttggaaggagctccttgccactggagcccaagcaac 28856927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 28857132 - 28857078
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| | ||||||||||||||||||||||| ||| |||||||| ||||    
T  28857132 gtattccccgggtgcgtccttggaaggagctccttgccactggagcccaagcaac 28857078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 39728391 - 39728337
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||||| ||||||| ||||||||||| ||| |||||||||||||    
T  39728391 gtattccccgggtacgttcttggaaagagctccttgccactggagcccaaacaac 39728337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 20525841 - 20525788
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||| |||||||| |||||| |||||||||||||| ||| |||||||| ||||    
T  20525841 tattccccggatacatccttgaaaggagctccttgccactggagcccaagcaac 20525788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 1899005 - 1898953
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaaca 71  Q
    |||||| |||| ||| ||||||||||||||||||||| |||  ||||||||||    
T  1899005 gtattccccgggtacatccttggaaggagctccttgccactgtagcccaaaca 1898953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 22810084 - 22810033
Alignment:
Q  22 ttctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22810084 ttctccggatacgtccttggaaggagctccttgccactagagcccaaacaac 22810033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 2467221 - 2467275
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  2467221 gtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaac 2467275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 44893381 - 44893435
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  44893381 gtattccccgggtacgtccttggaaggagctccttgccactggagcccaaacaac 44893435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 13085531 - 13085478
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaa 72  Q
    |||||| ||||||||||||||||||||||||||| || ||| ||||||||||||    
T  13085531 gtattccccggatacgtccttggaaggagctcctcgccactggagcccaaacaa 13085478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 583809 - 583767
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||||||| |||||||||| |||||||||||||||||    
T  583809 tacgtccttggaagtagctccttgccactagagcccaaacaac 583767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 6100479 - 6100425
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| ||||||||||||||| |||||||||||||| |||  ||||||||||||    
T  6100479 gtattccccggatacgtccttgaaaggagctccttgccactgaagcccaaacaac 6100425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 8141109 - 8141055
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| ||| ||||||||||||||| |||||||||| ||| |||||||||||||    
T  8141109 gtattccccgaatacgtccttggaagcagctccttgccactggagcccaaacaac 8141055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 10535514 - 10535560
Alignment:
Q  27 cggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||||||||||||||||||| ||| ||| |||||||||    
T  10535514 cggatacgtccttggaaggagctccttgccactggagtccaaacaac 10535560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 14666174 - 14666228
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||||||||||||||||| ||||||||||| ||| |||||||| ||||    
T  14666174 gtattccccggatacgtccttggaatgagctccttgccactggagcccaagcaac 14666228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 24938665 - 24938719
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||| || ||||||||| |||||||||||| ||| |||||||||||||    
T  24938665 gtattctccgggtatgtccttggagggagctccttgccactggagcccaaacaac 24938719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 38922517 - 38922571
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||||||||||||||||||||||||| ||| |||||||| ||||    
T  38922517 gtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaac 38922571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 9860106 - 9860153
Alignment:
Q  26 ccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||||||||||||||| |||| ||| || ||||||||||    
T  9860106 ccggatacgtccttggaaggagctctttgccactggatcccaaacaac 9860153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 34846814 - 34846767
Alignment:
Q  26 ccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||| ||||||||||||| ||||||||||| ||| |||||||||||||    
T  34846814 ccgggtacgtccttggaatgagctccttgccactggagcccaaacaac 34846767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 1013080 - 1013134
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| ||||||||||||||||||  |||||||||| ||| |||||||| ||||    
T  1013080 gtattccccggatacgtccttggaaaaagctccttgccactggagcccaagcaac 1013134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 24837249 - 24837195
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||||| ||||||||||||||||||| ||| |||||||| ||||    
T  24837249 gtattccccgggtacgtacttggaaggagctccttgccactggagcccaagcaac 24837195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 29933780 - 29933726
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||||| | ||| ||||||||||||||| ||| ||| |||||||||    
T  29933780 gtattctccggatacattcttagaaggagctccttgccactggagtccaaacaac 29933726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 33401914 - 33401956
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||| |||||||||||||| ||| |||||||||||||    
T  33401914 tacgtccttgaaaggagctccttgccactggagcccaaacaac 33401956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 3418617 - 3418670
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||| || ||||||||||||||||||||||||||| ||  ||| |||||||||    
T  3418617 tattccccagatacgtccttggaaggagctccttgccacgggagtccaaacaac 3418670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 6940564 - 6940511
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||| ||||||||| ||||||||| ||||||||| | ||| |||||||||||||    
T  6940564 tattttccggatacctccttggaatgagctccttaccactggagcccaaacaac 6940511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 7673758 - 7673803
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcc 65  Q
    ||||| || ||||||||||||||||||||||||||| ||| |||||    
T  7673758 tattccccagatacgtccttggaaggagctccttgccactggagcc 7673803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 16893943 - 16893890
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||| ||||||||||| |||||||||| ||||||| |||| ||||||| ||||    
T  16893943 tattccccggatacgtcattggaaggagttccttgccactatagcccaagcaac 16893890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 17845742 - 17845686
Alignment:
Q  17 cagtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||| |||  ||| |||||||||||||||| |||| ||| |||||||||||||    
T  17845742 cagtattccccgagtacatccttggaaggagctcattgccactggagcccaaacaac 17845686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 8e-18; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 41339498 - 41339552
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  41339498 gtattctccgggtacgtccttggaaggagctccttgccactagagcccaaacaac 41339552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 34667705 - 34667759
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  34667705 gtattccccgggtacgtccttggaaggagctccttgccactagagcccaaacaac 34667759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 38166037 - 38165981
Alignment:
Q  17 cagtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||| |||||||||||||||||||||||||||||| | | |||||||||||||    
T  38166037 cagtattccccggatacgtccttggaaggagctccttgccagtggagcccaaacaac 38165981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 1940884 - 1940931
Alignment:
Q  26 ccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  1940884 ccgggtacgtccttggaaggagctccttgccactagagcccaaacaac 1940931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 1446834 - 1446780
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  1446834 gtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaac 1446780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 8889030 - 8888976
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||||||||||||| |||||||||||||||  ||||||||||||||||    
T  8889030 gtattccccggatacgtccttagaaggagctccttgccgctagagcccaaacaac 8888976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 13073546 - 13073492
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||| | |||||||||||||||||||| |||| |||||||||||||||||    
T  13073546 gtattctccaggtacgtccttggaaggagctcattgccactagagcccaaacaac 13073492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 19651548 - 19651602
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||| |||||||||||||||||||||||| |||| ||| |||||||||||||    
T  19651548 gtattcttcggatacgtccttggaaggagctcattgccactggagcccaaacaac 19651602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 29895795 - 29895741
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  29895795 gtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaac 29895741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 52950078 - 52950036
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  52950078 tacgtccttggaaggagctccttgccactagagcccaaacaac 52950036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 13552121 - 13552068
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||| |||||||||| ||||||||||||||||||| ||| |||||||||||||    
T  13552121 tattccccggatacgtgcttggaaggagctccttgccactggagcccaaacaac 13552068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 5472951 - 5473005
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| ||||||||||||||| || ||||||||||| ||| |||||||||||||    
T  5472951 gtattccccggatacgtccttgaaatgagctccttgccactggagcccaaacaac 5473005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 6032743 - 6032797
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||||||||||||||||||||||||| ||| |||||||| ||||    
T  6032743 gtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaac 6032797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 6779219 - 6779165
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||| | |||||||||||||| |||||||||| ||| |||||||||||||    
T  6779219 gtattctccaggtacgtccttggaagaagctccttgccactggagcccaaacaac 6779165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 27248436 - 27248382
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| ||||||||||||||||||||||||| |||| ||| |||||||| ||||    
T  27248436 gtattccccggatacgtccttggaaggagctcgttgccactggagcccaagcaac 27248382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 33647729 - 33647675
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| || |||||||||||| |||||||||||||| |||||||||||| ||||    
T  33647729 gtattccccagatacgtccttgaaaggagctccttgccactagagcccaagcaac 33647675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 38075441 - 38075387
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||| ||||||||||||||||| ||||||||  || |||||||||||||    
T  38075441 gtattctccgaatacgtccttggaaggaactccttgccgctggagcccaaacaac 38075387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 53599068 - 53599014
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||||||||||||||||||||||||| | | |||||||||||||    
T  53599068 gtattccccgggtacgtccttggaaggagctccttgccaatggagcccaaacaac 53599014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 15829706 - 15829653
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||||||||||| ||| |||||||||  ||| |||||||||||||    
T  15829706 tattctccggatacgtccttgaaagaagctccttgtcactggagcccaaacaac 15829653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 24166460 - 24166404
Alignment:
Q  17 cagtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||| |||  ||||||||||||||||||||||||| ||| |||||||| ||||    
T  24166460 cagtattccccgagtacgtccttggaaggagctccttgccactggagcccaatcaac 24166404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 41162992 - 41163039
Alignment:
Q  26 ccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||||||||||||||||||||||  ||| |||||||| ||||    
T  41162992 ccggatacgtccttggaaggagctccttgtcactggagcccaagcaac 41163039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 2559303 - 2559261
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||||||||||||| |||| ||| |||||||||||||    
T  2559303 tacgtccttggaaggagctcgttgccactggagcccaaacaac 2559261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 3574561 - 3574603
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||||||||||||||| ||| |||||||| ||||    
T  3574561 tacgtccttggaaggagctccttgccactggagcccaagcaac 3574603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 15732551 - 15732605
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||||||||||||||||||| |  | ||||| ||| |||||||||||||    
T  15732551 gtattctccggatacgtccttggaagaattttcttgccactggagcccaaacaac 15732605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 20128319 - 20128281
Alignment:
Q  17 cagtattctccggatacgtccttggaaggagctccttgc 55  Q
    |||||||| ||||||||||||||||||||| ||||||||    
T  20128319 cagtattccccggatacgtccttggaaggaactccttgc 20128281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 33109323 - 33109277
Alignment:
Q  26 ccggatacgtccttggaaggagctccttgctactagagcccaaacaa 72  Q
    |||||||| ||||||||||||||| || || ||||||||||||||||    
T  33109323 ccggatacctccttggaaggagcttctcgccactagagcccaaacaa 33109277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 47078466 - 47078412
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||||||||||||||||||||||||| ||| || ||||| ||||    
T  47078466 gtattccccgggtacgtccttggaaggagctccttgccactggaacccaagcaac 47078412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 55921042 - 55920988
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| | ||||||||||||||||||||||| ||| |||||||| ||||    
T  55921042 gtattccccgggtgcgtccttggaaggagctccttgccactggagcccaagcaac 55920988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 295635 - 295688
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaa 72  Q
    |||||| |||||||||||||| ||||| | ||||||| ||| ||||||||||||    
T  295635 gtattccccggatacgtccttagaaggtgttccttgccactggagcccaaacaa 295688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 36262868 - 36262913
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagc 64  Q
    ||||||||||| ||||||||||||||||||| ||||| ||| ||||    
T  36262868 gtattctccgggtacgtccttggaaggagcttcttgccactggagc 36262913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 7741922 - 7741878
Alignment:
Q  30 atacgtccttggaaggagctccttgctactagagcccaaacaacg 74  Q
    |||||| |||| |||||||||||||| |||||||||||| |||||    
T  7741922 atacgtacttgaaaggagctccttgccactagagcccaagcaacg 7741878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 8064899 - 8064954
Alignment:
Q  17 cagtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||| || ||||| ||| |||||||||| |||||||||||||| |||||||    
T  8064899 cagtattctcagg-tacgttcttagaaggagctctttgctactagagcctaaacaac 8064954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 14567257 - 14567205
Alignment:
Q  21 attctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||| |||| ||||||||||||| ||||||||||| ||| |||||||| ||||    
T  14567257 attccccgggtacgtccttggaatgagctccttgccactggagcccaagcaac 14567205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 38168265 - 38168229
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgc 55  Q
    |||||| |||| |||||||||||||||||||||||||    
T  38168265 gtattccccgggtacgtccttggaaggagctccttgc 38168229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 14650322 - 14650269
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||| ||||||||||||||||||||||||| ||||||| |||||||||    
T  14650322 tattctccgggtacgtccttggaaggagctccttgccactagagtccaaacaac 14650269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 42032102 - 42032048
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  42032102 gtattccccgggtacgtccttggaaggagcttcttgctactggagcccaaacaac 42032048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 48804689 - 48804635
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  48804689 gtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaac 48804635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 9685744 - 9685691
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||| |||||||||| ||||||||||||||||||| ||| |||||||||||||    
T  9685744 tattccccggatacgtgcttggaaggagctccttgccactggagcccaaacaac 9685691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 1797458 - 1797412
Alignment:
Q  27 cggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  1797458 cggatacgtccttggaaggagctccttgccactggagcccaagcaac 1797412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 4195305 - 4195359
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||||||||||||||| ||||||||||||| ||| |||||||| ||||    
T  4195305 gtattccccggatacgtccttggcaggagctccttgccactggagcccaagcaac 4195359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 4228862 - 4228908
Alignment:
Q  27 cggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||||||||||||||||||||||  || |||||||||||||    
T  4228862 cggatacgtccttggaaggagctccttgccgctggagcccaaacaac 4228908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 17748485 - 17748539
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| ||| ||||||||||||||| |||| ||||| |||||||||||||||||    
T  17748485 gtattccccgaatacgtccttggaagaagctgcttgccactagagcccaaacaac 17748539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 43925518 - 43925464
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||||||||||||||||||||||||| ||| |||||||| ||||    
T  43925518 gtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaac 43925464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 10047979 - 10048015
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgc 55  Q
    |||||| ||||||||||||||||||||||||||||||    
T  10047979 gtattccccggatacgtccttggaaggagctccttgc 10048015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 45960115 - 45960159
Alignment:
Q  29 gatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||||| ||||||||||||||| |||| ||||||||    
T  45960115 gatacgtccttggaaagagctccttgctactggagctcaaacaac 45960159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 1605947 - 1605912
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttg 54  Q
    ||||||||||| ||||||||||||||||||||||||    
T  1605947 gtattctccgggtacgtccttggaaggagctccttg 1605912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 19914817 - 19914859
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||||||||||||||| ||| |||||||| ||||    
T  19914817 tacgtccttggaaggagctccttgccactggagcccaagcaac 19914859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 22268144 - 22268186
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||    
T  22268144 tacgtccttggaatgagctccttgccactggagcccaaacaac 22268186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 22973961 - 22973919
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||||||||||||||| || | |||||||||||||||    
T  22973961 tacgtccttggaaggagctcctcgccattagagcccaaacaac 22973919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 34659232 - 34659178
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||| ||| ||||||||||||||||| ||| |||||||||||||    
T  34659232 gtattccccgggtacatccctggaaggagctccttgccactggagcccaaacaac 34659178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 39420844 - 39420790
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||| |||||| |||||||||||||| |||||||||||| ||||    
T  39420844 gtattccccgggtacctccttgaaaggagctccttgccactagagcccaagcaac 39420790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 43346882 - 43346936
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| || |||||||| |||||||||||||||||| ||| ||| |||||||||    
T  43346882 gtattccccagatacgtctttggaaggagctccttgccactggagtccaaacaac 43346936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 43862075 - 43862129
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| || |||||||| |||||| |||||||||||  ||||||||||||||||    
T  43862075 gtattccccagatacgtctttggaaagagctccttgccgctagagcccaaacaac 43862129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 45447964 - 45447922
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||||||||||||||| |||||| ||||| ||||    
T  45447964 tacgtccttggaaggagctccttgccactagaacccaagcaac 45447922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 47341882 - 47341828
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||||||||||||| ||||||||||| ||| |||||||| ||||    
T  47341882 gtattccccgggtacgtccttggaatgagctccttgccactggagcccaagcaac 47341828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 11607136 - 11607083
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||| ||| |||||||||||||||||| ||||||| ||| |||||||| ||||    
T  11607136 tattccccgaatacgtccttggaaggagttccttgccactggagcccaagcaac 11607083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 22993471 - 22993524
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||| |||| ||||||||||||||||||||||||| ||| ||| |||| ||||    
T  22993471 tattccccgggtacgtccttggaaggagctccttgccactggagtccaagcaac 22993524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 13845320 - 13845368
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaa 68  Q
    |||||||||| |||||||||||||||||||| |||  ||| ||||||||    
T  13845320 tattctccgggtacgtccttggaaggagctcattgtcactggagcccaa 13845368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 16802129 - 16802081
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagccca 67  Q
    |||||| |||| |||||||||||||||||||| |||| ||| |||||||    
T  16802129 gtattccccgggtacgtccttggaaggagctcattgccactggagccca 16802081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 18785675 - 18785627
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagccca 67  Q
    |||||| |||| ||||||||||||||||||| ||||| ||| |||||||    
T  18785675 gtattccccgggtacgtccttggaaggagcttcttgccactggagccca 18785627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 21530756 - 21530708
Alignment:
Q  17 cagtattctccggatacgtccttggaaggagctccttgctactagagcc 65  Q
    |||||||| || | ||||||||||||||||||||||||| ||| |||||    
T  21530756 cagtattccccaggtacgtccttggaaggagctccttgccactggagcc 21530708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 8905255 - 8905308
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||||||| |||||||||||||||||| ||||||| |||||||||    
T  8905255 tattctccggatacgtcattggaaggagctccttgccactagagtccaaacaac 8905308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 2981033 - 2981089
Alignment:
Q  17 cagtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||||||||| ||||    
T  2981033 cagtattccccggatacgtccctggaaggagctccttgccactagagcccaagcaac 2981089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 5855526 - 5855472
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| ||| |||||||||||||||||||||||||| ||| |||||||||||||    
T  5855526 gtattccccgaatacgtccttggaaggagctccttgccactggagcccaaacaac 5855472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 11397992 - 11398046
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||||| ||||||||||||||||||||| ||| |||||||| ||||    
T  11397992 gtattctccggatacatccttggaaggagctccttgccactggagcccaagcaac 11398046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 33418219 - 33418273
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||| |||||| |||||||||||||||||| ||| |||||||||||||    
T  33418219 gtattctccgggtacgtctttggaaggagctccttgccactggagcccaaacaac 33418273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 41663960 - 41664014
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||||||||||||| ||||||||||||||| ||| |||||||||||||    
T  41663960 gtattccccggatacgtccttagaaggagctccttgccactggagcccaaacaac 41664014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 2567280 - 2567226
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||| |||||||||||||||||||||||||| | |  ||||||||||||    
T  2567280 gtattctccgaatacgtccttggaaggagctccttgccagtgaagcccaaacaac 2567226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 10173075 - 10173129
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| || |||||||||||||||||||| |||||| ||| |||||||||||||    
T  10173075 gtattccccagatacgtccttggaaggagcaccttgccactggagcccaaacaac 10173129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 31576651 - 31576705
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||| || |||||||||||| ||| ||||||||||| |||||||||||||||||    
T  31576651 gtattttcgggatacgtccttagaatgagctccttgccactagagcccaaacaac 31576705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 49078118 - 49078064
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||||||||||||| ||||||||||||||| ||| |||||||| ||||    
T  49078118 gtattccccggatacgtccttagaaggagctccttgccactggagcccaagcaac 49078064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 32151039 - 32151080
Alignment:
Q  32 acgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  32151039 acgtccttggaaggagctccttgccactggagcccaaacaac 32151080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 46929842 - 46929895
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||| |||||||| |||||||||||| ||||| |||||||||||| ||||    
T  46929842 tattctccagatacgtctttggaaggagcttcttgccactagagcccaagcaac 46929895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 48798175 - 48798228
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||| ||||||||||| |||||||||||||||||| ||| |||||| ||||||    
T  48798175 tattccccggatacgtcattggaaggagctccttgccactggagccccaacaac 48798228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 10336519 - 10336484
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgc 55  Q
    ||||||||||||||||| ||||||||||||||||||    
T  10336519 tattctccggatacgtctttggaaggagctccttgc 10336484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 32863 - 32821
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||||||||||||| |||| ||| |||||||||||||    
T  32863 tacgtccttggaaggagctcattgccactggagcccaaacaac 32821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 892401 - 892455
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| ||| ||||||||||| |||||||||||||| |||  ||||||||||||    
T  892401 gtattccccgaatacgtccttgaaaggagctccttgccactgaagcccaaacaac 892455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 10422792 - 10422738
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| ||| ||||||| |||||||||||||||||| |||  ||||||||||||    
T  10422792 gtattccccgaatacgtcattggaaggagctccttgccactgtagcccaaacaac 10422738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 18915871 - 18915817
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| |||||||||||||| |||||||||| |||  ||||||||||||    
T  18915871 gtattccccgggtacgtccttggaagaagctccttgccactgaagcccaaacaac 18915817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 31152704 - 31152666
Alignment:
Q  35 tccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  31152704 tccttggaaagagctccttgccactagagcccaaacaac 31152666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 34334399 - 34334445
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcc 65  Q
    |||||| |||||||||||||||||| ||||||||||| |||| ||||    
T  34334399 gtattccccggatacgtccttggaatgagctccttgccactaaagcc 34334445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 34877994 - 34877940
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| ||| |||||||||||||||| ||||||||| |||  ||||||||||||    
T  34877994 gtattccccgaatacgtccttggaaggtgctccttgccactgaagcccaaacaac 34877940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 40288581 - 40288635
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| ||| |||||||||||||| ||||||||||| ||| |||||||| ||||    
T  40288581 gtattccccgaatacgtccttggaaagagctccttgccactcgagcccaagcaac 40288635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 41743269 - 41743223
Alignment:
Q  27 cggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||||||||||||||||||| ||  |||||||| ||||    
T  41743269 cggatacgtccttggaaggagctccttgccaccggagcccaagcaac 41743223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 47313002 - 47313056
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| || |||||||||||||||||| ||| |||| ||| |||||||||||||    
T  47313002 gtattccccagatacgtccttggaaggatctcgttgccactggagcccaaacaac 47313056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 5063948 - 5064001
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||| || ||||||||||||||||||||| ||||| || |||||| |||||||    
T  5063948 tattccccagatacgtccttggaaggagcttcttgccaccagagcctaaacaac 5064001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 8763994 - 8763941
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||| |||| ||||||||||||||||||||||||| ||  |||||||| ||||    
T  8763994 tattccccgggtacgtccttggaaggagctccttgccacgggagcccaagcaac 8763941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 9853381 - 9853430
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaa 68  Q
    ||||| ||||| ||| ||||||||||||||||||||| ||| ||||||||    
T  9853381 gtattttccgggtacatccttggaaggagctccttgccactggagcccaa 9853430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 50503466 - 50503519
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||| ||||||||||||||| ||||||||||| || ||||||| ||| |||||    
T  50503466 tattccccggatacgtccttgaaaggagctcctcgccactagagtccatacaac 50503519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 12036846 - 12036902
Alignment:
Q  17 cagtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||  | ||||||||||||||||||| ||||| ||  |||||||||||||    
T  12036846 cagtattctctaggtacgtccttggaaggagcttcttgccaccggagcccaaacaac 12036902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 16956470 - 16956434
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgc 55  Q
    |||||| |||| |||||||||||||||||||||||||    
T  16956470 gtattccccgggtacgtccttggaaggagctccttgc 16956434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 25165388 - 25165352
Alignment:
Q  37 cttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  25165388 cttggaaggagctccttgccactagagcccaagcaac 25165352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 33004120 - 33004152
Alignment:
Q  20 tattctccggatacgtccttggaaggagctcct 52  Q
    ||||| |||||||||||||||||||||||||||    
T  33004120 tattccccggatacgtccttggaaggagctcct 33004152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 34719782 - 34719734
Alignment:
Q  17 cagtattctccggatacgtccttggaaggagctccttgctactagagcc 65  Q
    |||||||| || | ||||||||||||||||||||||||| | |||||||    
T  34719782 cagtattccccaggtacgtccttggaaggagctccttgccattagagcc 34719734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 29422220 - 29422164
Alignment:
Q  17 cagtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||| |||| |||||||||| |||||||||||||||||| |||||||||||||    
T  29422220 cagtattccccgggtacgtccttgaaaggagctccttgctactggagcccaaacaac 29422164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 38005407 - 38005351
Alignment:
Q  17 cagtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||| |||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  38005407 cagtattccccgggtacgtccttggaaggagctccttgccactggagcccaaacaac 38005351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 7747277 - 7747223
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  7747277 gtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaac 7747223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 21180417 - 21180471
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  21180417 gtattcttcgggtacgtccttggaaggagctccttgccactggagcccaaacaac 21180471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 21286447 - 21286393
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||||||||||||||||||||||||||||| ||| |||| ||||||||    
T  21286447 gtattccccggatacgtccttggaaggagctccttgccactggagctcaaacaac 21286393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 8410133 - 8410080
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||| ||||||||||||||||||||||||| ||| |||||||| ||||    
T  8410133 tattctccgggtacgtccttggaaggagctccttgccactggagcccaagcaac 8410080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 44945599 - 44945543
Alignment:
Q  17 cagtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||  ||||||||||||||||||||||||| ||| |||||||| ||||    
T  44945599 cagtattctccgagtacgtccttggaaggagctccttgccacttgagcccaagcaac 44945543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 10046579 - 10046633
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||||||| ||||||||||||||||||| | | |||||||| ||||    
T  10046579 gtattctccggatacgttcttggaaggagctccttgccattggagcccaagcaac 10046633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 20963212 - 20963266
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| ||||||||||| |||||||||| ||||||| ||| |||||||||||||    
T  20963212 gtattccccggatacgtcattggaaggaggtccttgccactggagcccaaacaac 20963266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 24179562 - 24179520
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||||||||||||| |||| |||||||||||||||||    
T  24179562 tacgtccttggaaggagctctttgccactagagcccaaacaac 24179520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 2550870 - 2550817
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||| ||||||||||||||| |||||||||||||| ||| |||||||| ||||    
T  2550870 tattccccggatacgtccttgtaaggagctccttgccactggagcccaagcaac 2550817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 19976910 - 19976963
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaa 72  Q
    |||||| |||||||||||||||||| ||||| ||||| ||| ||||||||||||    
T  19976910 gtattccccggatacgtccttggaaagagctacttgccactggagcccaaacaa 19976963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 22593141 - 22593084
Alignment:
Q  16 tcagtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||| |||| ||| ||||    
T  22593141 tcagtattccccgggtacgtccttggaaggagctccttgccactggagcacaagcaac 22593084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 32028405 - 32028365
Alignment:
Q  30 atacgtccttggaaggagctccttgctactagagcccaaac 70  Q
    ||||||||||||||| |||||||||| ||||||||||||||    
T  32028405 atacgtccttggaagcagctccttgccactagagcccaaac 32028365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 3643990 - 3644044
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||||||||||||||||| ||||||||| | ||| |||||||| ||||    
T  3643990 gtattccccggatacgtccttggaatgagctcctttccactggagcccaagcaac 3644044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 6358254 - 6358308
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||||||||||||| ||| ||||| ||||| ||| |||||||||||||    
T  6358254 gtattccccggatacgtcctttgaatgagcttcttgccactggagcccaaacaac 6358308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 12864227 - 12864173
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| ||| ||||||| |||||||||||||||||  ||| |||||||||||||    
T  12864227 gtattccccgaatacgtcattggaaggagctccttgtcactggagcccaaacaac 12864173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 14853470 - 14853524
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||||||| |||||| |||||| ||||||| ||| |||||||||||||    
T  14853470 gtattccccggatacatccttgaaaggagttccttgccactggagcccaaacaac 14853524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 18902645 - 18902687
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||||||||||||||| ||| |||||||| ||||    
T  18902645 tacgtccttggaaggagctccttgccactggagcccaagcaac 18902687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 34356209 - 34356155
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| || |||||||||||||||  |||||||||| ||| |||||||||||||    
T  34356209 gtattccccagatacgtccttggaaatagctccttgccactggagcccaaacaac 34356155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 39201623 - 39201665
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||    
T  39201623 tacgtccttggaaggagctccttgccactatagcccaatcaac 39201665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 42770762 - 42770808
Alignment:
Q  27 cggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||||||||||||||||| |||| ||| |||||||| ||||    
T  42770762 cggatacgtccttggaaggagctctttgccactggagcccaagcaac 42770808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 2528456 - 2528497
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaa 72  Q
    |||||||||||||||||||| |||| ||| ||||||||||||    
T  2528456 tacgtccttggaaggagctcattgccactggagcccaaacaa 2528497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 34722672 - 34722631
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaa 72  Q
    ||||||||||||||||||||||||  ||| ||||||||||||    
T  34722672 tacgtccttggaaggagctccttgtcactggagcccaaacaa 34722631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 41032020 - 41032057
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaa 68  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  41032020 tacgtccttggaaggagctccttgccactggagcccaa 41032057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 23500794 - 23500838
Alignment:
Q  29 gatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||| |||||||||||||||||| ||  |||||||||||||    
T  23500794 gatacgtctttggaaggagctccttgccaccggagcccaaacaac 23500838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 25549733 - 25549681
Alignment:
Q  17 cagtattctccggatacgtccttggaaggagctccttgctactagagcccaaa 69  Q
    |||||||| ||  |||||| ||||||||||||||||||| ||| |||||||||    
T  25549733 cagtattccccaaatacgtacttggaaggagctccttgccactggagcccaaa 25549681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 41187712 - 41187672
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctact 59  Q
    ||||||| | ||||||||||| |||||||||||||||||||    
T  41187712 gtattcttcagatacgtccttagaaggagctccttgctact 41187672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 55
Target Start/End: Complemental strand, 41187844 - 41187816
Alignment:
Q  27 cggatacgtccttggaaggagctccttgc 55  Q
    |||||||||||||||||||||||||||||    
T  41187844 cggatacgtccttggaaggagctccttgc 41187816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 41220638 - 41220602
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgc 55  Q
    |||||| |||| |||||||||||||||||||||||||    
T  41220638 gtattccccgggtacgtccttggaaggagctccttgc 41220602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 68516 - 68469
Alignment:
Q  26 ccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  68516 ccgggtacgtccttggaaggagctccttgccactagagcccaaacaac 68469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 576 - 522
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||||||||||||||||||||||||| |||||||||||| ||||    
T  576 gtattccccgggtacgtccttggaaggagctccttgccactagagcccaagcaac 522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 319428 - 319382
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcc 65  Q
    |||||| |||||||||||||||||||||||||||||| ||| |||||    
T  319428 gtattccccggatacgtccttggaaggagctccttgccactggagcc 319382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 10311572 - 10311626
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||||||||| ||||||||||||||||||||||| |||||||| ||||    
T  10311572 gtattccccggatacgttcttggaaggagctccttgctactggagcccaagcaac 10311626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 13468940 - 13468886
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||||||||||||||||||||||||||||| || ||||||||| ||||    
T  13468940 gtattccccggatacgtccttggaaggagctccttgccaccagagcccaagcaac 13468886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 21898655 - 21898601
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  21898655 gtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaac 21898601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 2271404 - 2271458
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| ||| |||||||||||||||||||||||||| ||| |||||||| ||||    
T  2271404 gtattccccgaatacgtccttggaaggagctccttgccactggagcccaagcaac 2271458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 8612077 - 8612131
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||||||||||||||||||||||||| ||| ||| |||||||||    
T  8612077 gtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaac 8612131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 14107461 - 14107515
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| ||| ||||||| |||||||||||||||||| ||| |||||||||||||    
T  14107461 gtattccccgaatacgtctttggaaggagctccttgccactggagcccaaacaac 14107515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 19230672 - 19230714
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  19230672 tacgtccttggaaggagctccttgccactggagcccaaacaac 19230714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 24671969 - 24672023
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||| |||||||||||| |||||||||||||| ||| |||||||| ||||    
T  24671969 gtattctccagatacgtccttgaaaggagctccttgccactggagcccaagcaac 24672023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 29333253 - 29333295
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||||||||||||| |||| |||||||||||||||||    
T  29333253 tacgtccttggaaggagctcattgccactagagcccaaacaac 29333295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 13036108 - 13036161
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||| ||| |||||||||||||||||||||||||| ||| |||||||| ||||    
T  13036108 tattccccgaatacgtccttggaaggagctccttgccactggagcccaagcaac 13036161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 6606200 - 6606236
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgc 55  Q
    |||||| ||||||||||||||||||||||||||||||    
T  6606200 gtattccccggatacgtccttggaaggagctccttgc 6606236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 3030732 - 3030775
Alignment:
Q  30 atacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||||||| ||||||||||| ||| |||||||||||||    
T  3030732 atacgtccttggaatgagctccttgccactggagcccaaacaac 3030775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 8938719 - 8938664
Alignment:
Q  18 agtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||| ||||||| ||| |||||||||||||||||  ||| |||||||||||||    
T  8938719 agtattccccggatatgtctttggaaggagctccttgtcactggagcccaaacaac 8938664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 3588048 - 3588102
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||||||||||| ||||||  | |||||||| ||| |||||||||||||    
T  3588048 gtattctccggatacgtctttggaataaactccttgccacttgagcccaaacaac 3588102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 5253326 - 5253380
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||||||||||||||||||||||||| | | |||||||| ||||    
T  5253326 gtattccccgggtacgtccttggaaggagctccttgccattggagcccaagcaac 5253380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 9179851 - 9179893
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||    
T  9179851 tacgtccttggaatgagctccttgccactggagcccaaacaac 9179893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 21016854 - 21016908
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||||||| ||||||||||||||||| ||| |||||||| ||||    
T  21016854 gtattccccgggtacgtccctggaaggagctccttgccactggagcccaagcaac 21016908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 29444875 - 29444917
Alignment:
Q  26 ccggatacgtccttggaaggagctccttgctactagagcccaa 68  Q
    |||| |||||| |||||||||||||||||| ||||||||||||    
T  29444875 ccgggtacgtctttggaaggagctccttgccactagagcccaa 29444917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 15643941 - 15643985
Alignment:
Q  29 gatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||||| ||||||||||| ||| |||||||| ||||    
T  15643941 gatacgtccttggaatgagctccttgccactggagcccaagcaac 15643985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 271178 - 271231
Alignment:
Q  20 tattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||| ||||||||||||||||||||||||| || ||||||||| ||||    
T  271178 tattctccgggtacgtccttggaaggagctccttgccaccagagcccaagcaac 271231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 250118 - 250170
Alignment:
Q  21 attctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||| |||| ||||||||||||| ||||||||||| ||| |||||||| ||||    
T  250118 attccccgggtacgtccttggaatgagctccttgccactggagcccaagcaac 250170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 8823 - 8867
Alignment:
Q  29 gatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||    
T  8823 gatacgtccttggaaggagctccttgccactggagcccaaacaac 8867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 15337 - 15283
Alignment:
Q  19 gtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||| |||| ||| |||||| |||||||||||||| |||||||||||||||||    
T  15337 gtattccccgggtacttccttgtaaggagctccttgccactagagcccaaacaac 15283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 12569 - 12527
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||||||||| |||||||||| |||||||||||||||||    
T  12569 tacgtccttggaagtagctccttgccactagagcccaaacaac 12527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 41038 - 40996
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||||| ||||||||||||||||| ||| |||||||||||||    
T  41038 tacgtccatggaaggagctccttgccactggagcccaaacaac 40996  T

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Target: scaffold0010 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 25899 - 25941
Alignment:
Q  31 tacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    ||||| |||||||||||||| |||||||| |||||||||||||    
T  25899 tacgtacttggaaggagctctttgctactggagcccaaacaac 25941  T

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Target: scaffold0384 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 5981 - 5925
Alignment:
Q  17 cagtattctccggatacgtccttggaaggagctccttgctactagagcccaaacaac 73  Q
    |||||||| |||| |||| ||||| |||||||||||||| |||||| ||||| ||||    
T  5981 cagtattccccgggtacgcccttgaaaggagctccttgccactagaacccaagcaac 5925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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