View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7448_low_1 (Length: 470)

Name: NF7448_low_1
Description: NF7448
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7448_low_1
NF7448_low_1
[»] chr7 (39 HSPs)
chr7 (20-261)||(43343761-43344003)
chr7 (262-464)||(18776683-18776883)
chr7 (262-464)||(29077205-29077404)
chr7 (265-464)||(8171460-8171656)
chr7 (262-464)||(20091197-20091398)
chr7 (262-464)||(12596207-12596404)
chr7 (262-464)||(23550988-23551188)
chr7 (261-464)||(48983755-48983961)
chr7 (262-464)||(10329327-10329527)
chr7 (262-464)||(19692079-19692279)
chr7 (261-464)||(24525598-24525802)
chr7 (261-464)||(10955469-10955672)
chr7 (261-412)||(26254030-26254179)
chr7 (261-444)||(28749715-28749896)
chr7 (261-464)||(38414792-38414993)
chr7 (261-460)||(47984884-47985083)
chr7 (264-464)||(8239670-8239869)
chr7 (262-464)||(25010418-25010611)
chr7 (345-450)||(2611260-2611365)
chr7 (346-426)||(33162338-33162418)
chr7 (345-450)||(7398450-7398555)
chr7 (346-445)||(9021799-9021898)
chr7 (353-450)||(23859072-23859169)
chr7 (345-437)||(23744808-23744900)
chr7 (345-450)||(27237421-27237526)
chr7 (353-450)||(36891577-36891674)
chr7 (346-450)||(6765680-6765784)
chr7 (347-445)||(36902924-36903022)
chr7 (128-261)||(43338774-43338914)
chr7 (353-450)||(12981325-12981422)
chr7 (352-450)||(18201136-18201234)
chr7 (268-330)||(40357303-40357365)
chr7 (353-444)||(20153206-20153297)
chr7 (346-412)||(21763586-21763652)
chr7 (369-447)||(38971255-38971333)
chr7 (345-450)||(12419493-12419598)
chr7 (346-402)||(9014177-9014233)
chr7 (20-68)||(43338956-43339004)
chr7 (394-434)||(40357413-40357453)
[»] chr6 (23 HSPs)
chr6 (262-464)||(13727317-13727517)
chr6 (261-464)||(21479482-21479684)
chr6 (262-464)||(21280533-21280733)
chr6 (263-464)||(33774105-33774305)
chr6 (262-464)||(27788608-27788806)
chr6 (262-464)||(19737612-19737810)
chr6 (262-459)||(20711638-20711833)
chr6 (261-464)||(30832442-30832642)
chr6 (262-464)||(24710914-24711117)
chr6 (262-464)||(17353942-17354142)
chr6 (276-464)||(28075771-28075960)
chr6 (261-426)||(27314096-27314259)
chr6 (345-464)||(34397845-34397964)
chr6 (264-444)||(1155767-1155947)
chr6 (270-464)||(235151-235343)
chr6 (352-450)||(2477590-2477688)
chr6 (352-450)||(6159440-6159538)
chr6 (357-450)||(21183686-21183779)
chr6 (353-450)||(20611792-20611889)
chr6 (369-447)||(4036953-4037031)
chr6 (346-431)||(30121783-30121868)
chr6 (268-321)||(19987277-19987330)
chr6 (277-313)||(20611924-20611960)
[»] chr8 (36 HSPs)
chr8 (261-464)||(2952136-2952339)
chr8 (265-464)||(30883314-30883512)
chr8 (261-464)||(45475802-45476002)
chr8 (261-464)||(3048434-3048635)
chr8 (265-464)||(13534609-13534804)
chr8 (265-464)||(13624149-13624344)
chr8 (261-464)||(37430075-37430276)
chr8 (262-464)||(23606548-23606747)
chr8 (261-464)||(42600767-42600968)
chr8 (262-464)||(23798179-23798379)
chr8 (273-464)||(5860671-5860862)
chr8 (262-464)||(10917376-10917575)
chr8 (261-464)||(41879166-41879365)
chr8 (353-450)||(8102911-8103008)
chr8 (345-450)||(7944521-7944626)
chr8 (345-450)||(41677172-41677278)
chr8 (345-450)||(5973106-5973211)
chr8 (345-450)||(11290183-11290288)
chr8 (346-450)||(39332405-39332509)
chr8 (368-450)||(5942695-5942777)
chr8 (345-450)||(15167414-15167519)
chr8 (354-450)||(5721558-5721654)
chr8 (262-330)||(20003728-20003796)
chr8 (353-450)||(15078757-15078854)
chr8 (345-443)||(34789861-34789959)
chr8 (345-450)||(8646205-8646309)
chr8 (353-450)||(25561502-25561597)
chr8 (346-411)||(30674403-30674468)
chr8 (346-450)||(14509983-14510086)
chr8 (346-391)||(9108551-9108596)
chr8 (352-412)||(23941097-23941157)
chr8 (376-415)||(5757114-5757153)
chr8 (353-392)||(34868184-34868223)
chr8 (346-402)||(34048705-34048761)
chr8 (261-307)||(33963267-33963313)
chr8 (345-385)||(38009151-38009191)
[»] chr2 (35 HSPs)
chr2 (262-464)||(4505878-4506078)
chr2 (262-464)||(3155201-3155401)
chr2 (265-464)||(6964991-6965186)
chr2 (262-464)||(8906996-8907197)
chr2 (262-464)||(12337365-12337566)
chr2 (262-464)||(29939781-29939980)
chr2 (262-464)||(27506659-27506858)
chr2 (262-464)||(24410420-24410623)
chr2 (261-464)||(3952990-3953189)
chr2 (265-464)||(10762488-10762683)
chr2 (262-460)||(26716116-26716313)
chr2 (261-422)||(40636164-40636322)
chr2 (262-460)||(9046017-9046213)
chr2 (265-432)||(34693991-34694155)
chr2 (265-432)||(34716403-34716567)
chr2 (262-464)||(7162768-7162967)
chr2 (268-422)||(5952642-5952791)
chr2 (345-450)||(16097006-16097111)
chr2 (345-446)||(24035544-24035645)
chr2 (262-377)||(1396617-1396730)
chr2 (347-450)||(38400796-38400899)
chr2 (345-448)||(21665699-21665802)
chr2 (345-450)||(13800543-13800649)
chr2 (345-450)||(12134039-12134144)
chr2 (345-450)||(28425709-28425814)
chr2 (262-450)||(16227285-16227472)
chr2 (277-450)||(7742063-7742238)
chr2 (262-392)||(8327674-8327801)
chr2 (346-450)||(11912757-11912861)
chr2 (379-450)||(37182668-37182739)
chr2 (346-425)||(42029168-42029247)
chr2 (277-386)||(22727391-22727497)
chr2 (346-402)||(11952588-11952643)
chr2 (374-442)||(22727530-22727598)
chr2 (353-392)||(10252472-10252511)
[»] chr5 (46 HSPs)
chr5 (262-464)||(27078996-27079197)
chr5 (270-464)||(34756289-34756481)
chr5 (261-464)||(36187794-36187994)
chr5 (262-464)||(15480006-15480204)
chr5 (262-464)||(16591990-16592189)
chr5 (266-464)||(19523184-19523380)
chr5 (262-464)||(38869279-38869478)
chr5 (267-464)||(2274875-2275070)
chr5 (262-464)||(16198709-16198909)
chr5 (261-464)||(9364276-9364477)
chr5 (265-464)||(30854314-30854511)
chr5 (262-444)||(31194528-31194706)
chr5 (263-464)||(28822253-28822457)
chr5 (261-464)||(16799239-16799442)
chr5 (262-448)||(22986473-22986657)
chr5 (262-464)||(27924067-27924267)
chr5 (262-464)||(7670909-7671118)
chr5 (262-444)||(31881348-31881528)
chr5 (350-460)||(40389537-40389647)
chr5 (345-448)||(23284058-23284161)
chr5 (346-427)||(7338021-7338102)
chr5 (345-450)||(34425902-34426007)
chr5 (345-446)||(36868872-36868973)
chr5 (345-450)||(1366522-1366627)
chr5 (346-450)||(14318382-14318486)
chr5 (345-450)||(2024638-2024743)
chr5 (353-450)||(2530901-2530998)
chr5 (345-452)||(10407458-10407565)
chr5 (345-450)||(33037779-33037884)
chr5 (346-450)||(2412087-2412191)
chr5 (353-445)||(26718953-26719045)
chr5 (353-445)||(26988697-26988789)
chr5 (277-450)||(40794257-40794428)
chr5 (353-447)||(24395741-24395835)
chr5 (345-450)||(11242314-11242419)
chr5 (347-403)||(22648734-22648790)
chr5 (262-330)||(23283943-23284011)
chr5 (346-450)||(41911614-41911718)
chr5 (345-392)||(606211-606258)
chr5 (353-440)||(10543682-10543769)
chr5 (261-327)||(40389452-40389518)
chr5 (368-449)||(15639643-15639724)
chr5 (345-389)||(27530543-27530587)
chr5 (352-412)||(17344993-17345053)
chr5 (352-388)||(22875003-22875039)
chr5 (345-385)||(35080766-35080806)
[»] chr3 (37 HSPs)
chr3 (262-464)||(54619121-54619321)
chr3 (262-464)||(38681011-38681211)
chr3 (262-464)||(21582759-21582960)
chr3 (262-464)||(36715942-36716143)
chr3 (261-464)||(27078485-27078687)
chr3 (261-464)||(27084282-27084484)
chr3 (262-464)||(47467672-47467872)
chr3 (262-464)||(8073257-8073455)
chr3 (263-464)||(3953816-3954014)
chr3 (262-464)||(43207157-43207355)
chr3 (262-464)||(42098789-42098989)
chr3 (261-464)||(50939151-50939351)
chr3 (262-464)||(34290554-34290754)
chr3 (266-464)||(44708465-44708660)
chr3 (266-460)||(37168359-37168551)
chr3 (262-464)||(53506802-53507002)
chr3 (265-464)||(53149235-53149432)
chr3 (261-464)||(54407072-54407275)
chr3 (265-444)||(36605973-36606149)
chr3 (274-464)||(18372467-18372658)
chr3 (261-453)||(50258541-50258731)
chr3 (345-464)||(9878686-9878805)
chr3 (381-462)||(29620423-29620504)
chr3 (345-450)||(54574826-54574931)
chr3 (268-464)||(48157127-48157310)
chr3 (353-450)||(8420328-8420425)
chr3 (262-324)||(29620364-29620426)
chr3 (353-450)||(32319162-32319259)
chr3 (353-443)||(28689368-28689458)
chr3 (357-410)||(23641329-23641382)
chr3 (345-414)||(42453442-42453511)
chr3 (346-443)||(49393099-49393195)
chr3 (346-450)||(25855424-25855527)
chr3 (345-450)||(26279542-26279649)
chr3 (262-330)||(48720429-48720497)
chr3 (345-450)||(52374658-52374763)
chr3 (346-450)||(789938-790042)
[»] chr1 (42 HSPs)
chr1 (261-464)||(6771787-6771990)
chr1 (262-464)||(44655737-44655936)
chr1 (261-464)||(14146296-14146496)
chr1 (265-464)||(50881426-50881621)
chr1 (262-464)||(5027545-5027746)
chr1 (262-464)||(23185423-23185622)
chr1 (262-464)||(5316676-5316875)
chr1 (268-460)||(16140055-16140244)
chr1 (262-464)||(4971536-4971735)
chr1 (262-464)||(17168952-17169151)
chr1 (262-439)||(21740852-21741029)
chr1 (262-464)||(19955713-19955912)
chr1 (262-464)||(40501707-40501907)
chr1 (261-464)||(27906645-27906834)
chr1 (262-464)||(9172940-9173140)
chr1 (262-464)||(9180922-9181122)
chr1 (262-464)||(3406414-3406614)
chr1 (262-464)||(3440206-3440406)
chr1 (262-464)||(1366797-1366995)
chr1 (265-464)||(13913401-13913599)
chr1 (279-464)||(41697072-41697254)
chr1 (345-462)||(27559635-27559752)
chr1 (262-437)||(6889634-6889805)
chr1 (262-437)||(6891480-6891651)
chr1 (261-464)||(51607357-51607557)
chr1 (261-425)||(22865377-22865538)
chr1 (346-450)||(38547035-38547139)
chr1 (345-450)||(39134720-39134826)
chr1 (352-449)||(33170770-33170867)
chr1 (345-450)||(45758504-45758609)
chr1 (278-464)||(44895648-44895827)
chr1 (345-446)||(5533326-5533428)
chr1 (346-450)||(26803958-26804059)
chr1 (268-330)||(34247154-34247216)
chr1 (345-443)||(38853539-38853637)
chr1 (346-450)||(6221688-6221791)
chr1 (353-450)||(43235774-43235873)
chr1 (345-408)||(17322621-17322684)
chr1 (277-449)||(50146307-50146476)
chr1 (353-435)||(35392295-35392376)
chr1 (262-297)||(52127460-52127495)
chr1 (394-434)||(34247066-34247106)
[»] chr4 (57 HSPs)
chr4 (257-460)||(54780771-54780973)
chr4 (266-464)||(47128977-47129172)
chr4 (274-464)||(38209520-38209708)
chr4 (262-464)||(34768492-34768691)
chr4 (262-464)||(32915375-32915575)
chr4 (262-464)||(34027569-34027768)
chr4 (256-464)||(10978890-10979098)
chr4 (276-461)||(43455463-43455645)
chr4 (261-464)||(5128757-5128959)
chr4 (261-464)||(48209230-48209437)
chr4 (262-457)||(2790659-2790851)
chr4 (261-464)||(32128574-32128775)
chr4 (266-464)||(1105522-1105717)
chr4 (262-464)||(16845011-16845210)
chr4 (261-464)||(54083159-54083359)
chr4 (261-464)||(55255259-55255448)
chr4 (253-464)||(10428107-10428322)
chr4 (262-464)||(37777140-37777340)
chr4 (262-464)||(37514649-37514848)
chr4 (262-464)||(19498494-19498691)
chr4 (261-422)||(17679432-17679590)
chr4 (273-464)||(35465097-35465284)
chr4 (265-464)||(35779248-35779442)
chr4 (261-464)||(16882312-16882512)
chr4 (355-464)||(13460197-13460306)
chr4 (262-464)||(40089506-40089714)
chr4 (265-426)||(51964736-51964897)
chr4 (262-404)||(16922245-16922386)
chr4 (345-412)||(51691913-51691980)
chr4 (268-464)||(38352189-38352372)
chr4 (277-450)||(52468290-52468459)
chr4 (366-450)||(4167910-4167994)
chr4 (262-410)||(9578575-9578728)
chr4 (352-450)||(27112034-27112132)
chr4 (345-450)||(10041998-10042103)
chr4 (395-464)||(23509846-23509915)
chr4 (345-464)||(24969427-24969536)
chr4 (352-450)||(36118463-36118561)
chr4 (262-400)||(23508427-23508564)
chr4 (352-442)||(36178684-36178774)
chr4 (345-450)||(24396938-24397043)
chr4 (345-425)||(39655252-39655332)
chr4 (352-450)||(2135326-2135424)
chr4 (354-450)||(37744916-37745013)
chr4 (262-330)||(24969718-24969786)
chr4 (277-447)||(39329325-39329492)
chr4 (345-450)||(36362869-36362973)
chr4 (278-334)||(2975358-2975414)
chr4 (346-389)||(24614018-24614061)
chr4 (359-410)||(40217276-40217327)
chr4 (360-410)||(29425187-29425237)
chr4 (345-387)||(30507120-30507162)
chr4 (352-450)||(45656179-45656277)
chr4 (262-297)||(980360-980395)
chr4 (262-317)||(13460305-13460360)
chr4 (355-402)||(15735142-15735189)
chr4 (360-410)||(11906904-11906954)
[»] scaffold0070 (1 HSPs)
scaffold0070 (261-464)||(1328-1528)
[»] scaffold0039 (1 HSPs)
scaffold0039 (262-464)||(106523-106723)
[»] scaffold0012 (1 HSPs)
scaffold0012 (353-450)||(206496-206593)
[»] scaffold1590 (1 HSPs)
scaffold1590 (345-450)||(257-362)
[»] scaffold0018 (1 HSPs)
scaffold0018 (352-450)||(173516-173614)
[»] scaffold0001 (2 HSPs)
scaffold0001 (262-403)||(183106-183244)
scaffold0001 (399-464)||(181904-181969)
[»] scaffold0097 (1 HSPs)
scaffold0097 (352-450)||(38924-39022)
[»] scaffold0182 (1 HSPs)
scaffold0182 (346-446)||(23993-24093)
[»] scaffold1320 (1 HSPs)
scaffold1320 (353-450)||(1353-1450)
[»] scaffold0007 (1 HSPs)
scaffold0007 (345-447)||(230858-230960)
[»] scaffold0022 (2 HSPs)
scaffold0022 (345-450)||(40084-40191)
scaffold0022 (345-450)||(138144-138251)
[»] scaffold0227 (2 HSPs)
scaffold0227 (346-391)||(16123-16168)
scaffold0227 (381-450)||(16026-16095)
[»] scaffold0003 (1 HSPs)
scaffold0003 (372-450)||(351360-351438)


Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 20 - 261
Target Start/End: Complemental strand, 43344003 - 43343761
Alignment:
Q  20 gcttgaaatgatcatgacttccattgaatcttcaagcagcaatatgaatctttctaacataaatctctcnnnnnnnn-gtttaaaataaaaaacatagcg 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||    
T  43344003 gcttgaaatgatcatgacttccattgaatcttcaagcagcaatatgaatctttctaacataaatctctctttttttttgtttaaaataaaaaacatagcg 43343904  T
Q  119 gtctctttgatttgtacgttcaagttttcaataaagatagagactgtgagagcaatgaggatgatgtttctttatctatcagcttggttaatttattttg 218  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43343903 gtctctttgatttgtacgttcaagttttcaataaagatagagacagtgagagcaatgaggatgatgtttctttatctatcagcttggttaatttattttg 43343804  T
Q  219 tttttagttgttttatatctcaaatatcttgatgacatatacg 261  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  43343803 tttttagttgttttatatctcaaatatcttgatgacatatacg 43343761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 18776683 - 18776883
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||  ||||         |||||||||||||||||    
T  18776683 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaa--tataattttttttaaaagagcaatgttcta 18776780  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||| |||| ||||||||||||    
T  18776781 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaaaatgactaccgtatacatgagaaacccccacctaacacc 18776880  T
Q  462 aaa 464  Q
    |||    
T  18776881 aaa 18776883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 29077404 - 29077205
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| |||          |||||||||||||||||    
T  29077404 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtat---tttttttaaaagagcaatgttcta 29077308  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||    
T  29077307 tttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacaccaagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 29077208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 265 - 464
Target Start/End: Original strand, 8171460 - 8171656
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    |||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||| | |||          ||||||||||||||||||||    
T  8171460 ggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaagcgtat---tttttttaaaagagcaatgttctattt 8171556  T
Q  365 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||| |||||||||||||||    
T  8171557 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 8171656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 20091197 - 20091398
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||          |||| | ||||| ||||    
T  20091197 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaaaaaa-caatgatcta 20091295  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||| ||||||||||||    
T  20091296 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 20091395  T
Q  462 aaa 464  Q
    |||    
T  20091396 aaa 20091398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 12596207 - 12596404
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |           ||||||| ||||||||    
T  12596207 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgttttttttt-----aaagagcgatgttcta 12596301  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||| ||||||||||| ||||||||||||    
T  12596302 tttatatttttttaaagataaatacaaggtgccgtatatatgtggtacacccagaggtgaaaatgactaccgtatgcatgaggaacccccacctaacacc 12596401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 23550988 - 23551188
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||          |||| ||||||| ||||    
T  23550988 cagggtcgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacatat---ttttttaaaaaaagcaatgatcta 23551084  T
Q  362 tttatatttt-ttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    |||||||||| |||||||||||||| |||||| ||||||||||||||||| | |  |||||||||||||||||||||||||||||||| |||||||||||    
T  23551085 tttatatttttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacac 23551184  T
Q  461 caaa 464  Q
    ||||    
T  23551185 caaa 23551188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 261 - 464
Target Start/End: Original strand, 48983755 - 48983961
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnn---aaaagagcaatgt 357  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||             |||| | |||||     
T  48983755 gcagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccaatgataaaatcaaaacgtatttttttttttttaaaaaaaacaatga 48983854  T
Q  358 tctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaa 457  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |  ||||||||| |||||||||||||||||||||| ||||||||    
T  48983855 tctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaataactaccgtatacatgaggaacccccacctaa 48983954  T
Q  458 caccaaa 464  Q
    |||||||    
T  48983955 caccaaa 48983961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 10329327 - 10329527
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||| ||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||          |||| ||||||||||||    
T  10329327 cagggccgttcctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtat--ttttttaaaaaaaagcaatgttcta 10329424  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| ||||||||||||||||| || | ||| |  ||||||||||||||||||||||||||| |||| |||| |||||||    
T  10329425 tttatattttttaaaagataaatataaggtgccgtatatatgaggaaaacccaaaggtgaaaatgactaccgtatacatgagaaacccccacttaacacc 10329524  T
Q  462 aaa 464  Q
    |||    
T  10329525 aaa 10329527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 19692279 - 19692079
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||| ||||| |||||||||| ||||||||||| |||||||||| | ||||||||||||||||||| |||          |||||||||||||||||    
T  19692279 cagggccctccctaagaattcggaagctcggctctggaaatgaaaagtgtccagtgataaaatcaaaacgtat--ttttttttaaaagagcaatgttcta 19692182  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||  |||||||||||||  |||||||||||||||||  | |||||||||    
T  19692181 tttatattttttaaaagataaatataaggtgccatatatatgcggtacacctaaaggtgaaaatgactttcgtatacatgaggaaccctcgcctaacacc 19692082  T
Q  462 aaa 464  Q
    |||    
T  19692081 aaa 19692079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 261 - 464
Target Start/End: Original strand, 24525598 - 24525802
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaa-aagagcaatgttc 359  Q
    |||||| ||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||||||||| |||             || | ||||||||    
T  24525598 gcagggtcgtccctaagaattcggaggctcggctctgggaatgaaaagaggcctgtgataaaatcaaaacgtattttttttttttttaaaaacaatgttc 24525697  T
Q  360 tatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaaca 459  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||| |   ||||||||||||||||||||||||||||||| ||||||||||    
T  24525698 tatttatattttttaaaagataaatataaggtgccgtgtatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccccacctaaca 24525797  T
Q  460 ccaaa 464  Q
    |||||    
T  24525798 ccaaa 24525802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 261 - 464
Target Start/End: Complemental strand, 10955672 - 10955469
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||| |||| ||||||||||||||||| |||| |  |||||| ||||| ||||||| ||||||||   | |          |||||||| |||||||    
T  10955672 gcagggctgtccatgagaattcggaggctcagctcggggaatgaatagaggtcagtgattaaatcaaattttttttttttttttaaaagagcgatgttct 10955573  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||| |||||||||||    
T  10955572 atttatattttttaaaagataaatataaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgaggaacccccacctaacac 10955473  T
Q  461 caaa 464  Q
    ||||    
T  10955472 caaa 10955469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 261 - 412
Target Start/End: Complemental strand, 26254179 - 26254030
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||| |||||||||||||||||||||||||| ||  |||||||||||| ||||||||||||||||||||||          ||||||||||||||||    
T  26254179 gcagggctgtccctgagaattcggaggctcggctttgggaatgaaaagaggtcagtgataaaatcaaaacatat--ttttttttaaaagagcaatgttct 26254082  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26254081 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 26254030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 261 - 444
Target Start/End: Complemental strand, 28749896 - 28749715
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||||||| ||| |||||||||||||||||||          ||||||||||| ||||    
T  28749896 gcagggccgtccctgaaaattcggaggctcggctctgggaatgaaaagagaccaatgataaaatcaaaacatat-ttttttttcaaaagagcaatattct 28749798  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||  ||  |||||||| ||||||||||||||||||    
T  28749797 atttatatttttgaaaagataaatacaaggtgccgtatatatgcggtacactcagatgtgaaaat-actaccgtatacatgagg 28749715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 261 - 464
Target Start/End: Original strand, 38414792 - 38414993
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||| ||||||| |||||||||||||||| ||||| |||||||||||| | ||| ||||||||||||| |||          |||||||||| |||||    
T  38414792 gcagggtcgtccctaagaattcggaggctcgactctggaaatgaaaagagactagtcataaaatcaaaacgtat--ttttttgcaaaagagcaacgttct 38414889  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    |||| |||||||||||||||||||| |||||| |||||||||| |||||||| |  ||||||||||||||| |||||||||||||||| |||||||||||    
T  38414890 atttgtattttttaaaagataaatataaggtgacgtatatatgtggtacacccaaaggtgaaaatgactactgtatacatgaggaacccccacctaacac 38414989  T
Q  461 caaa 464  Q
    ||||    
T  38414990 caaa 38414993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 261 - 460
Target Start/End: Original strand, 47984884 - 47985083
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||| ||||||||  ||||||||||||  |||||||||| |||||||||||||||||||| | |          |||| |||||||||||    
T  47984884 gcagggccgtccctaagaattcgttggctcggctctgggaatgaaaagatgccagtgataaaatcaaaacgtgttttttttttaaaaa-agcaatgttct 47984982  T
Q  361 atttatatttt-ttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaaca 459  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||||||||||| |  |||||||||||| ||||||||||||||||||| ||||||||||    
T  47984983 atttatatttttttaaaagaaaaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgaccaccgtatacatgaggaacccccacctaaca 47985082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 264 - 464
Target Start/End: Complemental strand, 8239869 - 8239670
Alignment:
Q  264 gggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatt 363  Q
    ||||||||||| |||||| ||||||||||||||| |||||||||||||||| ||||||||| ||||| |||          ||||||| |||||||||||    
T  8239869 gggccgtccctaagaatttggaggctcggctctggaaatgaaaagaggccaatgataaaatgaaaacgtat---tttttttaaaagagtaatgttctatt 8239773  T
Q  364 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaa--cctccacctaacacc 461  Q
    |||||||||||||| ||||||| || |||||||||||||| |||||||| |   |||||||||| ||||||||| ||||||||  ||||||| |||||||    
T  8239772 tatattttttaaaaaataaatataatgtgccgtatatatgtggtacacccaaatgtgaaaatgattaccgtatatatgaggaacccctccacttaacacc 8239673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 25010611 - 25010418
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||          |||| ||||||| ||||    
T  25010611 cagggccgtccctaagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacgtat-tttttaaaaaaaaaagcaatgatcta 25010513  T
Q  362 tttata--ttttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaaca 459  Q
    ||||||  |||||||||||||||||| ||||||          |||||||||| |  |||||||||||||||||||||||||||||||| ||||||||||    
T  25010512 tttatattttttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 25010423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 345 - 450
Target Start/End: Original strand, 2611260 - 2611365
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||  | |||||||||| || || ||||||||||||    
T  2611260 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacacaatggtgaaaatcacaactgtatacatgagg 2611359  T
Q  445 aacctc 450  Q
    ||||||    
T  2611360 aacctc 2611365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 346 - 426
Target Start/End: Original strand, 33162338 - 33162418
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatg 426  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  33162338 aaagagcaatgctctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatg 33162418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 345 - 450
Target Start/End: Complemental strand, 7398555 - 7398450
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| ||||||| |||||||||||||||||||| |||||||| | ||||||||  ||||||||| |||||| |||||||||||    
T  7398555 aaaagaacaatgttctatttaaattttttgaaagataaatacaaggtgccatatatatgtgatacacctaaaggtgaaaatcactaccatatacatgagg 7398456  T
Q  445 aacctc 450  Q
    ||||||    
T  7398455 aacctc 7398450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 346 - 445
Target Start/End: Original strand, 9021799 - 9021898
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 445  Q
    ||||| |||| | ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||| |||||||||||||||||||    
T  9021799 aaagaacaatttgctatttaaattttttaaaagataaatacaatgtgccgtatatatgcggtacacccaaaggtgaaaatcactaccgtatacatgagga 9021898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 353 - 450
Target Start/End: Complemental strand, 23859169 - 23859072
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    ||||||||||||| |||||||||||||||||||||| || ||||||||||||| |||||| |  | ||||||| ||||||||||||||||||| ||||    
T  23859169 aatgttctatttaaattttttaaaagataaatacaatgtaccgtatatatgcgatacacccaaagatgaaaattactaccgtatacatgaggatcctc 23859072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 345 - 437
Target Start/End: Complemental strand, 23744900 - 23744808
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtata 437  Q
    |||||| |||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||  | | ||||| |||||||||||    
T  23744900 aaaagaacaatgttctaattaaattttttaaaagataaatacaaggtgccgcatatatgcggtacacctaaagataaaaatcactaccgtata 23744808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 345 - 450
Target Start/End: Original strand, 27237421 - 27237526
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||  ||||||||| | |  | |||  ||||||||| |||| |||||||||||||    
T  27237421 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatgtgatgaatctaaaggtgaaaatcactatcgtatacatgagg 27237520  T
Q  445 aacctc 450  Q
    ||||||    
T  27237521 aacctc 27237526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 353 - 450
Target Start/End: Complemental strand, 36891674 - 36891577
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    |||||||||||||||||||||||| ||| ||||||| |||  |||||||| ||||||| | |  ||||||||| ||||||||||||||||||||||||    
T  36891674 aatgttctatttatattttttaaatgatgaatacaatgtgttgtatatattcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacctc 36891577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 346 - 450
Target Start/End: Original strand, 6765680 - 6765784
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 445  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| || ||||| | |  ||||||||| ||||||||||| | ||| |    
T  6765680 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatataagccgtacatccaaaggtgaaaatcactaccgtatataagagta 6765779  T
Q  446 acctc 450  Q
    |||||    
T  6765780 acctc 6765784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 347 - 445
Target Start/End: Original strand, 36902924 - 36903022
Alignment:
Q  347 aagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 445  Q
    |||| |||||||||||||| ||||||||| ||||||||||||| || ||||||||||  |||||||||  ||||||||| | ||| |||||||||||||    
T  36902924 aagaacaatgttctatttaaattttttaatagataaatacaagatgtcgtatatatgttgtacacctaaaggtgaaaatcagtactgtatacatgagga 36903022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 128 - 261
Target Start/End: Complemental strand, 43338914 - 43338774
Alignment:
Q  128 atttgtacgttcaagttttcaataaagata----gagactgtgagagcaatgaggatgatgtttctttatctatcagcttggttaatttattttgttttt 223  Q
    ||||||||||||||||||||||||||||||    ||||| ||||  ||||||| |||||||||||||||||||||||  |  ||  ||||||||||||||    
T  43338914 atttgtacgttcaagttttcaataaagatatatagagacagtgacggcaatgacgatgatgtttctttatctatcag-atcattggtttattttgttttt 43338816  T
Q  224 ag---ttgttttatatctcaaatatc-ttgatgacatatacg 261  Q
    ||   ||||||||| ||||||| ||| |||||||||||||||    
T  43338815 agtaattgttttatgtctcaaacatctttgatgacatatacg 43338774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 353 - 450
Target Start/End: Complemental strand, 12981422 - 12981325
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    |||||||||||||  |||||||||||||||||||||||| || |||||| |||||||||  |  ||||||||| ||||| ||||| ||||||||||||    
T  12981422 aatgttctatttaatttttttaaaagataaatacaaggttccatatatacgcggtacacacaaaggtgaaaatcactactgtatatatgaggaacctc 12981325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 352 - 450
Target Start/End: Complemental strand, 18201234 - 18201136
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    ||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||||||||||  |||||||||   |||| || ||||||||||||||    
T  18201234 caatgatctatttaaattttttaaaatataaatacaagatgccatatatatgtggtacacctaagggtgaaaatcgttaccttacacatgaggaacctc 18201136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 40357303 - 40357365
Alignment:
Q  268 cgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaac 330  Q
    ||||| |||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||    
T  40357303 cgtccttgagaattcggaggctcggctctggaaatgaaaaaaggtcagtgataaaatcaaaac 40357365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 444
Target Start/End: Complemental strand, 20153297 - 20153206
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| |||||| |||||||||||||||||||||| |||  ||||||||||| || ||| |  | ||||||| ||| ||||||||||||||    
T  20153297 aatgttttatttaaattttttaaaagataaatacaaagtgttgtatatatgcgataaacccaaagatgaaaatcactgccgtatacatgagg 20153206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 21763586 - 21763652
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 412  Q
    ||||| || ||||||||||| |||||||||||||||||||||| ||  |||||||||||| ||||||    
T  21763586 aaagaacattgttctatttaaattttttaaaagataaatacaaagtatcgtatatatgcgatacacc 21763652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 369 - 447
Target Start/End: Complemental strand, 38971333 - 38971255
Alignment:
Q  369 tttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaac 447  Q
    |||||||||||||||||||||||| ||||||||||   ||||||||   |||||||| ||||||||| ||| |||||||    
T  38971333 tttttaaaagataaatacaaggtgtcgtatatatgttatacacctaaatgtgaaaatcactaccgtaaacacgaggaac 38971255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 450
Target Start/End: Original strand, 12419493 - 12419598
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |||||||||||||||||||||| || || ||||| || | |||| | |  | ||||||| ||||  | ||||||||||    
T  12419493 aaaagaacaatgttctatttaaattttttaaaagataaatacaatgtaccttatatgtgtgatacatccaaagatgaaaatcactattgaatacatgagg 12419592  T
Q  445 aacctc 450  Q
    ||||||    
T  12419593 aacctc 12419598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 402
Target Start/End: Original strand, 9014177 - 9014233
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatat 402  Q
    ||||| ||||||| |||||| |||||||||||||||||||||| |||  ||||||||    
T  9014177 aaagaacaatgttttatttaaattttttaaaagataaatacaatgtgttgtatatat 9014233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 43339004 - 43338956
Alignment:
Q  20 gcttgaaatgatcatgacttccattgaatcttcaagcagcaatatgaat 68  Q
    |||||| |||||||||||| ||||||||||||||  |||||||||||||    
T  43339004 gcttgagatgatcatgactaccattgaatcttcattcagcaatatgaat 43338956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 394 - 434
Target Start/End: Original strand, 40357413 - 40357453
Alignment:
Q  394 cgtatatatgcggtacacctagtggtgaaaatgactaccgt 434  Q
    ||||||||||||||||||| || | ||||||||||||||||    
T  40357413 cgtatatatgcggtacaccaagagatgaaaatgactaccgt 40357453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 2e-78; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 13727317 - 13727517
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||           |||||||||||||||||    
T  13727317 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacata--attttttttaaaagagcaatgttcta 13727414  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||    
T  13727415 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 13727514  T
Q  462 aaa 464  Q
    |||    
T  13727515 aaa 13727517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 261 - 464
Target Start/End: Complemental strand, 21479684 - 21479482
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |         ||||||||||||||||    
T  21479684 gcagggccgtctctgagaatttggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacata-atttttttttaaaagagcaatgttct 21479586  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||    
T  21479585 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacac 21479486  T
Q  461 caaa 464  Q
    ||||    
T  21479485 caaa 21479482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 21280733 - 21280533
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||           |||||||||||||||||    
T  21280733 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacata--attttttttaaaagagcaatgttcta 21280636  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||  ||||||||||||    
T  21280635 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaactcccacctaacacc 21280536  T
Q  462 aaa 464  Q
    |||    
T  21280535 aaa 21280533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 263 - 464
Target Start/End: Complemental strand, 33774305 - 33774105
Alignment:
Q  263 agggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctat 362  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |         ||||||| ||||||||||    
T  33774305 agggccatccttgagaattcggaggctcggctctgaaaatgaaaagaggccagtaataaaatcaaaacata-atttttttttaaaagagtaatgttctat 33774207  T
Q  363 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacca 462  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |   ||||||||||||||||||||||||||||||| |||||||||||||    
T  33774206 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaatgtgaaaatgactaccgtatacatgaggaacccccacctaacacca 33774107  T
Q  463 aa 464  Q
    ||    
T  33774106 aa 33774105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 27788608 - 27788806
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||          ||||||||||| |||||    
T  27788608 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtat----ttttttaaaagagcaattttcta 27788703  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||| ||||||||||||    
T  27788704 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 27788803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 19737612 - 19737810
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||| |||||||||||||| | ||| |||||||| |  |||||||||||||||||||||||||||||  | |          |||||||||||||||||    
T  19737612 cagggtcgtccctgagaatttgaaggttcggctct-aggatgaaaagaggccagtgataaaatcaaaatgttt---tttttttaaaagagcaatgttcta 19737707  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  19737708 tttatatttttttaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 19737807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 262 - 459
Target Start/End: Original strand, 20711638 - 20711833
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||| ||||||||||||||||||||||||| ||||  |||||||||||| |||| ||||||||||||| |||          |||||||||||||||||    
T  20711638 cagggacgtccctgagaattcggaggctcggttctgggaatgaaaagaggtcagtcataaaatcaaaacgtat--ttttttttaaaagagcaatgttcta 20711735  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaaca 459  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||| ||| ||||||    
T  20711736 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccatctaaca 20711833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 261 - 464
Target Start/End: Original strand, 30832442 - 30832642
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||| |||          ||||| || |||||||    
T  30832442 gcagggccgtccctgagaattcgaaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtat---ttttttaaaaagcgcgatgttct 30832538  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    ||||| ||||||||||| ||||||||||| ||||||||||||| |||||||| || | |||||||||||||||||| ||||||||||| |||||||||||    
T  30832539 atttacattttttaaaaaataaatacaagatgccgtatatatgtggtacacccagagatgaaaatgactaccgtatgcatgaggaacccccacctaacac 30832638  T
Q  461 caaa 464  Q
    ||||    
T  30832639 caaa 30832642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 24710914 - 24711117
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnna-aaagagcaatgttct 360  Q
    ||||||||||||||||||||||||||||| |||| |  ||||||||||||  ||||||||||||||||| | |            ||||||  |||||||    
T  24710914 cagggccgtccctgagaattcggaggctcagctcagggaatgaaaagaggttagtgataaaatcaaaacgtttttttttttttttaaagagtgatgttct 24711013  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||  || |||||||||||||||||||||||||||||||| |||||||||||    
T  24711014 atttatattttttaaaagataaatacaaggtgccgtatatatgtggtacactcagaggtgaaaatgactaccgtatacatgaggaacccccacctaacac 24711113  T
Q  461 caaa 464  Q
    ||||    
T  24711114 caaa 24711117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 17354142 - 17353942
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| |||||||||||||||| ||||   |||||||||||| |||||||||||||||||| |||          |||| ||||||||||||    
T  17354142 cagggccgtccctaagaattcggaggctcgactcttggaatgaaaagaggtcagtgataaaatcaaaacgtat--tttttttaaaaaaagcaatgttcta 17354045  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| |   ||||||||||||| ||||||||||| ||||| ||||||||||||    
T  17354044 tttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaatgtgaaaatgactatcgtatacatgatgaacccccacctaacacc 17353945  T
Q  462 aaa 464  Q
    |||    
T  17353944 aaa 17353942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 276 - 464
Target Start/End: Complemental strand, 28075960 - 28075771
Alignment:
Q  276 agaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnna-aaagagcaatgttctatttatatttttta 374  Q
    |||||| |||||||||||||||  ||||||||||||||||||| ||||||||||| |||            ||| |||||||||||||||||||||||||    
T  28075960 agaatttggaggctcggctctgggaatgaaaagaggccagtgaaaaaatcaaaacgtattttttttattttaaaaagcaatgttctatttatatttttta 28075861  T
Q  375 aaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    ||||||||||| ||||||||||||||||||| |||||| |  |||||||||||||||||||||||||||||||| |||||||||||||||    
T  28075860 aaagataaatataaggtgccgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 28075771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 261 - 426
Target Start/End: Original strand, 27314096 - 27314259
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||||| |||||||||||||| |||||  ||||||||||||||||||||||||||||||| |||          ||||||||||||||||    
T  27314096 gcagggccgtccctgaaaattcggaggctcgactctgggaatgaaaagaggccagtgataaaatcaaaacgtat---tttttttaaaagagcaatgttct 27314192  T
Q  361 atttatattttttaaaa-gataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatg 426  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  || ||||||||||    
T  27314193 atttatattttttaaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatg 27314259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 345 - 464
Target Start/End: Complemental strand, 34397964 - 34397845
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||| |||||||||| |||| ||||||||    
T  34397964 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgacgtatatatgcggtacacctaaaggtaaaaatgactatcgtaaacatgagg 34397865  T
Q  445 aacctccacctaacaccaaa 464  Q
    ||||||||| ||||||||||    
T  34397864 aacctccacttaacaccaaa 34397845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 264 - 444
Target Start/End: Original strand, 1155767 - 1155947
Alignment:
Q  264 gggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatt 363  Q
    ||||||||||| | |||| |||||||||| |||   |||||||||||| |||||||||||||||||  ||            ||||||||||||||||||    
T  1155767 gggccgtccctaaaaatttggaggctcggttctaggaatgaaaagaggtcagtgataaaatcaaaaagtaatttttttttttaaagagcaatgttctatt 1155866  T
Q  364 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||| | || ||||||||||||||||||||||||||||    
T  1155867 tatattttttaaaagataaatacaaggtgtcatatatatgcggtacatccagaggtgaaaatgactaccgtatacatgagg 1155947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 270 - 464
Target Start/End: Original strand, 235151 - 235343
Alignment:
Q  270 tccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatatt 369  Q
    ||||| |||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||| |||           ||| ||||||| ||||||||||||    
T  235151 tccctaagaattcggaggttcggctatgagaatgaaaagagaccagtgataaaatcaaaacgtattttttttt---aaaaagcaatgatctatttatatt 235247  T
Q  370 ttttaaaagataaatacaaggtgcc--gtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    |||||||||||||||| ||||||||  |||||||| | ||||||| |  | ||||||||||||||||||||||||| |||| ||||| |||||||||    
T  235248 ttttaaaagataaatataaggtgccgggtatatataccgtacacccaaagatgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaa 235343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 352 - 450
Target Start/End: Original strand, 2477590 - 2477688
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| |   |||||||| ||||||||||||||||||||||||    
T  2477590 caatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctc 2477688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 352 - 450
Target Start/End: Complemental strand, 6159538 - 6159440
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||   |  |||| |||| ||||||||||| || |||||||||    
T  6159538 caatgttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtacattcaaaggtggaaatcactaccgtatatataaggaacctc 6159440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 357 - 450
Target Start/End: Original strand, 21183686 - 21183779
Alignment:
Q  357 ttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    ||||||||| |||||||||||||||||||||| ||  |||||||||| |||||||| |  | ||||||| ||||||||||||||||||||||||    
T  21183686 ttctatttaaattttttaaaagataaatacaaagtagcgtatatatgtggtacacccaaagttgaaaatcactaccgtatacatgaggaacctc 21183779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 353 - 450
Target Start/End: Complemental strand, 20611889 - 20611792
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    ||||||||| ||| |||||||||| ||||||||||||||| ||||||||| ||  ||| | |  ||||||||| ||||||||||||||||||||||||    
T  20611889 aatgttctacttaaattttttaaacgataaatacaaggtgtcgtatatatacgacacatccaaaggtgaaaatcactaccgtatacatgaggaacctc 20611792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 369 - 447
Target Start/End: Complemental strand, 4037031 - 4036953
Alignment:
Q  369 tttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaac 447  Q
    ||||||| ||||||||||||||||||||||||||  |||||||| |  ||| || || ||||||||||| |||||||||    
T  4037031 tttttaagagataaatacaaggtgccgtatatatatggtacacccaaaggtaaagatcactaccgtatatatgaggaac 4036953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 431
Target Start/End: Complemental strand, 30121868 - 30121783
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactac 431  Q
    ||||| ||||||| |||||| ||||||||||| |||||||||||||| | |||||||||| |||| | |  ||||||||| |||||    
T  30121868 aaagaacaatgttttatttaaattttttaaaaaataaatacaaggtgtcatatatatgcgatacatccaaaggtgaaaatcactac 30121783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 19987330 - 19987277
Alignment:
Q  268 cgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataa 321  Q
    ||||||| |||||||||||| |||||||| | |||||||||||| |||||||||    
T  19987330 cgtccctaagaattcggaggatcggctctcagaatgaaaagaggtcagtgataa 19987277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 313
Target Start/End: Complemental strand, 20611960 - 20611924
Alignment:
Q  277 gaattcggaggctcggctctgaaaatgaaaagaggcc 313  Q
    ||||||||||||||||||||| || ||||||||||||    
T  20611960 gaattcggaggctcggctctgtaagtgaaaagaggcc 20611924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 145; Significance: 4e-76; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 261 - 464
Target Start/End: Original strand, 2952136 - 2952339
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||           ||||||||||||||||    
T  2952136 gcagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaaagagcaatgttct 2952235  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||||||||| |||||||||||    
T  2952236 atttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacac 2952335  T
Q  461 caaa 464  Q
    ||||    
T  2952336 caaa 2952339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 265 - 464
Target Start/End: Complemental strand, 30883512 - 30883314
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |         ||||||||||||||||||||    
T  30883512 ggccgtccctgagaattcagaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacata-atttttttttaaaagagcaatgttctattt 30883414  T
Q  365 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||    
T  30883413 atattttttaaaagataaatacaatgtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 30883314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 261 - 464
Target Start/End: Complemental strand, 45476002 - 45475802
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||| |||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||| |||          ||||||||||||||||    
T  45476002 gcagggccatccctgagaattcggaggctcggctcggggaatgaaaagaggccagtgataaaatcaaaacgtat---tttttttaaaagagcaatgttct 45475906  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||| |||||||||||    
T  45475905 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacccccacctaacac 45475806  T
Q  461 caaa 464  Q
    ||||    
T  45475805 caaa 45475802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 261 - 464
Target Start/End: Original strand, 3048434 - 3048635
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||           ||||||||||| | ||    
T  3048434 gcagggccgtctctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacata--attttttttaaaagagcaatatact 3048531  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||  ||||||||||    
T  3048532 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagagatgaaaatgactaccgtatacacgaggaaccctcacctaacac 3048631  T
Q  461 caaa 464  Q
    ||||    
T  3048632 caaa 3048635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 265 - 464
Target Start/End: Original strand, 13534609 - 13534804
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    |||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||          ||||||||||||||||||||    
T  13534609 ggccgtccctgaaaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtat---tttttttaaaagagcaatgttctattt 13534705  T
Q  365 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||    
T  13534706 atattttttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 13534804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 265 - 464
Target Start/End: Original strand, 13624149 - 13624344
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    |||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||          ||||||||||||||||||||    
T  13624149 ggccgtccctgaaaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtat---tttttttaaaagagcaatgttctattt 13624245  T
Q  365 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||    
T  13624246 atattttttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 13624344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 261 - 464
Target Start/End: Original strand, 37430075 - 37430276
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |          |||||||| |||||||    
T  37430075 gcagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgttt--ttttttttaaaagagcgatgttct 37430172  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||  ||| ||||||    
T  37430173 atttatattttttaaaagataaatacaaggtgccgtatatatgcgttacacctagaggtaaaaatgactaccgtatacatgaggaaccctcacgtaacac 37430272  T
Q  461 caaa 464  Q
    ||||    
T  37430273 caaa 37430276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 23606548 - 23606747
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| |||          |||||||||||||||||    
T  23606548 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgtat---tttttttaaaagagcaatgttcta 23606644  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  ||| |||||||||||||||||||||||||||| ||||||||||||    
T  23606645 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaggaacccccacctaacacc 23606744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 261 - 464
Target Start/End: Complemental strand, 42600968 - 42600767
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |          |||| ||||||| |||    
T  42600968 gcagggccgtccctaagaattcggaggctcggctctgaaaatgaaaagaggtcagtgataaaatcaaaacgttt--ttttttttaaaaaagcaatgatct 42600871  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||| |  |||||||||||||||||||||||||||||||| |||||||||||    
T  42600870 atttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacac 42600771  T
Q  461 caaa 464  Q
    ||||    
T  42600770 caaa 42600767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 23798179 - 23798379
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| ||||||||||||||||||||||  || ||||||||| || ||||||||||||||| ||||          ||||||||||||||||    
T  23798179 cagggccgtccctaagaattcggaggctcggctctgggaacgaaaagaggtcaatgataaaatcaaaacgtatatttttttt--aaagagcaatgttcta 23798276  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |   ||||||||||||||||||||||||||||||| ||||||||||||    
T  23798277 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccccacctaacacc 23798376  T
Q  462 aaa 464  Q
    |||    
T  23798377 aaa 23798379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 273 - 464
Target Start/End: Original strand, 5860671 - 5860862
Alignment:
Q  273 ctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatattttt 372  Q
    ||||||||| ||||||||||||||| ||||||||||||| || ||||||||||||||||||            |||||||||||||||||||||||||||    
T  5860671 ctgagaatttggaggctcggctctggaaatgaaaagaggtcaatgataaaatcaaaacataatatttatttttaaagagcaatgttctatttatattttt 5860770  T
Q  373 taaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||| |||| | |||||||||||||    
T  5860771 taaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgagaaaccccaacctaacaccaaa 5860862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 10917575 - 10917376
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||          |||| | ||||| ||||    
T  10917575 cagggctgtccttaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtat---ttttttaaaaaaaacaatgatcta 10917479  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||||| ||||||||||||    
T  10917478 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccttatacatgaggaacccccacctaacacc 10917379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 261 - 464
Target Start/End: Complemental strand, 41879365 - 41879166
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||||||||||||||||||| |||||||||||||  ||||||||||||  ||||||||||| ||||| |||          |||||| |||||||||    
T  41879365 gcagggccgtccctgagaattcgaaggctcggctctgggaatgaaaagaggttagtgataaaattaaaacgtat----ttttttaaaagaacaatgttct 41879270  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| | |  ||||||||||||||||| ||||||||| |||| |||||||||||    
T  41879269 atttatattttttaaaagataaatacaaggtaccgtatatatgcggtacatccaaaggtgaaaatgactaccgaatacatgagaaacccccacctaacac 41879170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 353 - 450
Target Start/End: Complemental strand, 8103008 - 8102911
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    |||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||| | ||||||||||||||||||||||    
T  8103008 aatgttatatttaaattttttaaaagataaatacaaggtgcagtatatatgcggtacacctaaaggtgaaaatcattaccgtatacatgaggaacctc 8102911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 345 - 450
Target Start/End: Original strand, 7944521 - 7944626
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| ||||||| |||||| ||||||||||| |||||||||||||||||||||||||  ||||||| |  ||||||||| ||||||||||||||||||    
T  7944521 aaaagaacaatgttttatttaaattttttaaaaaataaatacaaggtgccgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgagg 7944620  T
Q  445 aacctc 450  Q
    ||||||    
T  7944621 aacctc 7944626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 345 - 450
Target Start/End: Original strand, 41677172 - 41677278
Alignment:
Q  345 aaaagagcaatgttctatttatatttt-ttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgag 443  Q
    |||||| |||||||||||||| ||||| |||||||||||||||||| || |||||||||||| |||| |||  ||||||||| ||||| |||||||||||    
T  41677172 aaaagaacaatgttctatttaaatttttttaaaagataaatacaagatgtcgtatatatgcgatacatctaaaggtgaaaatcactactgtatacatgag 41677271  T
Q  444 gaacctc 450  Q
    |||||||    
T  41677272 gaacctc 41677278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 450
Target Start/End: Original strand, 5973106 - 5973211
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||  ||||||| |  | ||||||| | ||||||||||| ||||    
T  5973106 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacacccatagatgaaaatcattaccgtatacacgagg 5973205  T
Q  445 aacctc 450  Q
    ||||||    
T  5973206 aacctc 5973211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 450
Target Start/End: Complemental strand, 11290288 - 11290183
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| ||||||| |||||| |||||||||||||||||||||||||| ||||||||||  ||||||  |  ||||||||| |||||||||||||||||     
T  11290288 aaaagaacaatgttttatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacactcaaaggtgaaaatcactaccgtatacatgagc 11290189  T
Q  445 aacctc 450  Q
    ||||||    
T  11290188 aacctc 11290183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 346 - 450
Target Start/End: Original strand, 39332405 - 39332509
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 445  Q
    ||||| ||||||||||||||  ||||| ||||||||||||||||||| | |||||| |||||||| | |  ||||||||| |||||||||||||||||||    
T  39332405 aaagaacaatgttctatttaattttttaaaaagataaatacaaggtgtcatatataagcggtacatccaaaggtgaaaatcactaccgtatacatgagga 39332504  T
Q  446 acctc 450  Q
    |||||    
T  39332505 acctc 39332509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 368 - 450
Target Start/End: Complemental strand, 5942777 - 5942695
Alignment:
Q  368 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    |||||||||||||||||||||| || ||||||| ||||||||||| |  ||||||||| ||||||||||||||||||||||||    
T  5942777 ttttttaaaagataaatacaagatgtcgtatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgaggaacctc 5942695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 345 - 450
Target Start/End: Original strand, 15167414 - 15167519
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| ||||||||||||||||||| || |||  ||||||||||| |||||| |   |||||||| |||| |||||||||||||    
T  15167414 aaaagaacaatgttctatttaaattttttaaaagataaatataaagtgttgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagg 15167513  T
Q  445 aacctc 450  Q
    ||||||    
T  15167514 aacctc 15167519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 354 - 450
Target Start/End: Complemental strand, 5721654 - 5721558
Alignment:
Q  354 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||  ||||||||| |   |||||||| |||||||||||| |||||||||||    
T  5721654 atgttctatttaatttttttaaaagataaatacaaggtgccctatataatcggtacacccaaaagtgaaaatcactaccgtatacctgaggaacctc 5721558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 262 - 330
Target Start/End: Original strand, 20003728 - 20003796
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaac 330  Q
    |||||||||||||||||||| ||||||||||||| |  |||||||||||||||||||||||||||||||    
T  20003728 cagggccgtccctgagaatttggaggctcggctcggggaatgaaaagaggccagtgataaaatcaaaac 20003796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 353 - 450
Target Start/End: Complemental strand, 15078854 - 15078757
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    ||||||||||||| | ||||||||||||||||| ||||||| ||||||||||  |||||| |   |||||||| |||| |||||||||||||||||||    
T  15078854 aatgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 15078757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 345 - 443
Target Start/End: Original strand, 34789861 - 34789959
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgag 443  Q
    |||||| | |||||||||||| || | |||||||||||||||||| || ||||||||||  ||||||| |  ||||||||| |||||||||||||||||    
T  34789861 aaaagaacgatgttctatttaaatctcttaaaagataaatacaagatgtcgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgag 34789959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 345 - 450
Target Start/End: Complemental strand, 8646309 - 8646205
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||  |||||||||||  |||||  |   |||||||| |||||||||||||| ||     
T  8646309 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtatcgtatatatgc-atacacgcaaatgtgaaaatcactaccgtatacataaga 8646211  T
Q  445 aacctc 450  Q
    ||||||    
T  8646210 aacctc 8646205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 353 - 450
Target Start/End: Original strand, 25561502 - 25561597
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    ||||||||||||| || ||||||| |||||||||||||||||||||||||||| || ||| |   |||||||| ||| ||||||||||||||||||||    
T  25561502 aatgttctatttaaatcttttaaa-gataaatacaaggtgccgtatatatgcgata-acccaaatgtgaaaatcactgccgtatacatgaggaacctc 25561597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 346 - 411
Target Start/End: Original strand, 30674403 - 30674468
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacac 411  Q
    ||||| |||||||||||||| || |||||||||||||||| |||||| |||||||||||| |||||    
T  30674403 aaagaacaatgttctatttaaatgttttaaaagataaatataaggtgtcgtatatatgcgatacac 30674468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 450
Target Start/End: Original strand, 14509983 - 14510086
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtg-aaaatgactaccgtatacatgagg 444  Q
    ||||| |||||||| ||||| ||||||||||||| ||||| |||||| ||||||||  ||||||||| |   ||| ||||| |||||||||||||||||     
T  14509983 aaagaacaatgttcaatttaaattttttaaaagacaaatataaggtgtcgtatata--cggtacacccaaatgtgaaaaatcactaccgtatacatgagt 14510080  T
Q  445 aacctc 450  Q
    ||||||    
T  14510081 aacctc 14510086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 391
Target Start/End: Complemental strand, 9108596 - 9108551
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggt 391  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||    
T  9108596 aaagaacaatgttctatttaaattttttaaaagataaatacaaggt 9108551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 412
Target Start/End: Original strand, 23941097 - 23941157
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 412  Q
    ||||||| |||||| |||||||||||||||||||||||||| | |||||| ||| ||||||    
T  23941097 caatgttttatttaaattttttaaaagataaatacaaggtgtcatatataagcgatacacc 23941157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 376 - 415
Target Start/End: Complemental strand, 5757153 - 5757114
Alignment:
Q  376 aagataaatacaaggtgccgtatatatgcggtacacctag 415  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  5757153 aagataaatacaaggtgccgtatatatgcggaacacctag 5757114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 392
Target Start/End: Original strand, 34868184 - 34868223
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtg 392  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  34868184 aatgttctatttaaattttttaaaagataaatacaaggtg 34868223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 402
Target Start/End: Original strand, 34048705 - 34048761
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatat 402  Q
    ||||| |||||||||||||| |  ||||||||||||||||||| ||| |||||||||    
T  34048705 aaagaacaatgttctatttaaacattttaaaagataaatacaatgtgtcgtatatat 34048761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 33963267 - 33963313
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaa 307  Q
    |||||||||| | ||||||||||||||||||||| ||| ||||||||    
T  33963267 gcagggccgttcatgagaattcggaggctcggctttgagaatgaaaa 33963313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 38009151 - 38009191
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaata 385  Q
    |||||| |||||||||||||| | |||||||||||||||||    
T  38009151 aaaagaacaatgttctatttaaaatttttaaaagataaata 38009191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 4e-76; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 4506078 - 4505878
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||           |||||||||||||||||    
T  4506078 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacata--attttttttaaaagagcaatgttcta 4505981  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||||||||||||    
T  4505980 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaacacc 4505881  T
Q  462 aaa 464  Q
    |||    
T  4505880 aaa 4505878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 3155401 - 3155201
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||| ||||||||           |||||||||||||||||    
T  3155401 cagggccgtccctgagaattcggaggctcggctttaaaaatgaaaagaggtcagtgataaaattaaaacata--attttttttaaaagagcaatgttcta 3155304  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  3155303 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 3155204  T
Q  462 aaa 464  Q
    |||    
T  3155203 aaa 3155201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 265 - 464
Target Start/End: Complemental strand, 6965186 - 6964991
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    ||         ||||||||||||||||||||    
T  6965186 ggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaa----taattttttttaaaagagcaatgttctattt 6965091  T
Q  365 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||    
T  6965090 atattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 6964991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 8906996 - 8907197
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |         ||||||| |||||||||    
T  8906996 cagggccgttcctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacata-atttttttttaaaagagtaatgttcta 8907094  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||| ||||||||||||||||||||||| |||| ||||||||||||    
T  8907095 tttatattttttaaaagataaatacaaggcgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagaaacccccacctaacacc 8907194  T
Q  462 aaa 464  Q
    |||    
T  8907195 aaa 8907197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 12337365 - 12337566
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||| |         |||||||||||||||||    
T  12337365 cagggccgtccctgagaattcgaaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatata-atttttttttaaaagagcaatgttcta 12337463  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    ||||||||||||||||||||||||||||||| | |||||||| |||||||| || |||||||||||||||||||||||||||||||| ||||||||||||    
T  12337464 tttatattttttaaaagataaatacaaggtgtcatatatatgtggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 12337563  T
Q  462 aaa 464  Q
    |||    
T  12337564 aaa 12337566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 29939781 - 29939980
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||| ||||||||||||||||| |||||||||||||  ||| |||||||| |||||||||||||||||| |||          |||||||||||||||||    
T  29939781 caggaccgtccctgagaattcgaaggctcggctctgggaataaaaagaggtcagtgataaaatcaaaacgtat---tttttttaaaagagcaatgttcta 29939877  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||| |  |||||||||||||||||||||||||||||||| ||||||||||||    
T  29939878 tttatattttttacaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccaccacctaacacc 29939977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 27506659 - 27506858
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||          |||| ||||||| ||||    
T  27506659 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtat---tttttaaaaaaaagcaatgatcta 27506755  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||| |  ||| ||||||||||| |||||||||||||||  ||||||||||||    
T  27506756 tttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtaaaaatgactactgtatacatgaggaactcccacctaacacc 27506855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 24410623 - 24410420
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| ||||||||||||||||| | ||  ||||||||||||||||||||||||||||||| |||           ||| | ||||||||||    
T  24410623 cagggccgtccctaagaattcggaggctcggttttgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttttaaaaaacaatgttcta 24410524  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaa-cctccacctaacac 460  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||| || |||||||||||    
T  24410523 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccccccacctaacac 24410424  T
Q  461 caaa 464  Q
    ||||    
T  24410423 caaa 24410420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 261 - 464
Target Start/End: Complemental strand, 3953189 - 3952990
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||| |||||||||||||| |||||||||||| || ||||||||||||| |||||||||||||||||  |||           ||||| | |||||||    
T  3953189 gcagggtcgtccctgagaatttggaggctcggctttggaaatgaaaagaggtcagtgataaaatcaaaatgtatttttttt----aaagaccgatgttct 3953094  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||| |||||||| ||||||||||| |||||||||||    
T  3953093 atttatattttttaaaagataaatacaaggtgccgtatacatgcggtacacccagaggtgaaaatgattaccgtatgcatgaggaacccccacctaacac 3952994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 265 - 464
Target Start/End: Original strand, 10762488 - 10762683
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    |||||||||| |||||| |||||||| ||||||  ||||||||||||||||||||||||| ||||| | |           |||||||||||||||||||    
T  10762488 ggccgtccctaagaatttggaggctcagctctgggaatgaaaagaggccagtgataaaattaaaacgtttttttttt----aaagagcaatgttctattt 10762583  T
Q  365 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    ||||||||||||||||||||| ||||||| ||||||||| |||||||| |  |||||||||||||||||||||||||||||||| |||||||||||||||    
T  10762584 atattttttaaaagataaatataaggtgcggtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 10762683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 262 - 460
Target Start/End: Complemental strand, 26716313 - 26716116
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| ||||||||  ||||||||| ||  |||||||||||| |||||||||||||||||| |||          |||||||||||||||||    
T  26716313 cagggccgtccctaagaattcgttggctcggctttgggaatgaaaagaggtcagtgataaaatcaaaacgtat--ttttttttaaaagagcaatgttcta 26716216  T
Q  362 tttatatttttt-aaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    |||||||||||| |||||||||||| |||||||| ||||||||||||||||| |  |||||||||||||||||||||||||||||||| |||||||||||    
T  26716215 tttatatttttttaaaagataaatataaggtgccatatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacac 26716116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 261 - 422
Target Start/End: Complemental strand, 40636322 - 40636164
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||| ||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  40636322 gcagagccgtccctgagaattcggaggctcagctctgggaatgaaaagaggccagtgataaaatcaaaacatat---tttttttaaaagagcaatgttct 40636226  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaa 422  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  40636225 atttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtgaa 40636164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 262 - 460
Target Start/End: Complemental strand, 9046213 - 9046017
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||  ||||||||  ||||| ||||||  ||| ||||||||||||||||||||||||||| |||          |||||| ||||||||||    
T  9046213 cagggccgtcccaaagaattcgttggctcagctctgggaattaaaagaggccagtgataaaatcaaaacgtat---tgtttttaaaagaacaatgttcta 9046117  T
Q  362 tttatatttttt-aaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||| |||||||||||    
T  9046116 tttatatttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacac 9046017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 265 - 432
Target Start/End: Complemental strand, 34694155 - 34693991
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||| |||||||||||||||| |||          ||||||||||||||||||||    
T  34694155 ggccgtccctgagaattcggaggttcggatctggaaatgaaaagaggcccgtgataaaatcaaaacgtat---tttttttaaaagagcaatgttctattt 34694059  T
Q  365 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactacc 432  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| || ||| ||||||||||||    
T  34694058 atattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtcaaaatgactacc 34693991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 265 - 432
Target Start/End: Complemental strand, 34716567 - 34716403
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||| |||||||||||||||| |||          ||||||||||||||||||||    
T  34716567 ggccgtccctgagaattcggaggttcggatctggaaatgaaaagaggcccgtgataaaatcaaaacgtat---tttttttaaaagagcaatgttctattt 34716471  T
Q  365 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactacc 432  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| || ||| ||||||||||||    
T  34716470 atattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtcaaaatgactacc 34716403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 7162967 - 7162768
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||||||| |||| |||||| |||| |  ||||||||||||||||||||||||| ||||  | |          |||||||| ||||||||    
T  7162967 cagggccgtccctgagatttcgaaggctcagctcggggaatgaaaagaggccagtgataaaattaaaatgtct---tttttttaaaagagcgatgttcta 7162871  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||||||||||||| |||||||||| | ||||||||||    
T  7162870 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatatatgaggaacccctacctaacacc 7162771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 268 - 422
Target Start/End: Original strand, 5952642 - 5952791
Alignment:
Q  268 cgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttata 367  Q
    |||||||||||||||||||| ||||||||   ||||||||||||||| ||||||||||||||| |||          |||||||||||||| |||||||     
T  5952642 cgtccctgagaattcggaggttcggctctcggaatgaaaagaggccaatgataaaatcaaaacgtat---tttttttaaaagagcaatgttatatttat- 5952737  T
Q  368 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaa 422  Q
     |||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  5952738 -tttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaa 5952791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 345 - 450
Target Start/End: Complemental strand, 16097111 - 16097006
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||| |  ||||||||| |||||| |||||||||||    
T  16097111 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgatgtacacccaaaggtgaaaattactaccttatacatgagg 16097012  T
Q  445 aacctc 450  Q
    ||||||    
T  16097011 aacctc 16097006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 345 - 446
Target Start/End: Original strand, 24035544 - 24035645
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||  ||||||||| ||||||| ||||||||||    
T  24035544 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtataaatgcgatacacctaaaggtgaaaatcactaccgcatacatgagg 24035643  T
Q  445 aa 446  Q
    ||    
T  24035644 aa 24035645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 262 - 377
Target Start/End: Original strand, 1396617 - 1396730
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||| ||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||  |||         |||||||||||||||||    
T  1396617 cagggccttccttgagaattcggaggctcgactctggaaatgaaaagaggccagtgataaaatcaaaac--ataattttttttaaaagagcaatgttcta 1396714  T
Q  362 tttatattttttaaaa 377  Q
    ||||||||||||||||    
T  1396715 tttatattttttaaaa 1396730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 347 - 450
Target Start/End: Complemental strand, 38400899 - 38400796
Alignment:
Q  347 aagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaa 446  Q
    |||| |||||||||||||| |||||||||||||||||||||||||| | |||||||||| ||||   |  ||||||||| ||||||||||||||||||||    
T  38400899 aagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacattcaaaggtgaaaatcactaccgtatacatgaggaa 38400800  T
Q  447 cctc 450  Q
    ||||    
T  38400799 cctc 38400796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 345 - 448
Target Start/End: Original strand, 21665699 - 21665802
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| ||||||||||||||||||||| |||| |||||||||| | |||| | |   |||||||| ||||||||||||||||||    
T  21665699 aaaagaacaatgttctatttaaattttttaaaagataaatacacggtgtcgtatatatgtgatacatcaaaatgtgaaaatcactaccgtatacatgagg 21665798  T
Q  445 aacc 448  Q
    ||||    
T  21665799 aacc 21665802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 345 - 450
Target Start/End: Original strand, 13800543 - 13800649
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtaca-cctagtggtgaaaatgactaccgtatacatgag 443  Q
    |||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||| || |  ||||||||| |||||  |||||| |||    
T  13800543 aaaagaacaatgttctatttaaattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaaggtgaaaatcactactatatacacgag 13800642  T
Q  444 gaacctc 450  Q
    |||||||    
T  13800643 gaacctc 13800649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 345 - 450
Target Start/End: Original strand, 12134039 - 12134144
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |   ||||||||||||||||||||| ||||||||||||| |||||| |   |||||||| |||||||||||||| |||    
T  12134039 aaaagaacaatgttctatttaaaaaatttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaagtgaaaatcactaccgtatacattagg 12134138  T
Q  445 aacctc 450  Q
    ||||||    
T  12134139 aacctc 12134144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 345 - 450
Target Start/End: Original strand, 28425709 - 28425814
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |  ||||||||||||||||||||||| ||||||||||| ||||||| |   |||||||| |||||| |||| ||||||    
T  28425709 aaaagaacaatgttctatttaaaaattttaaaagataaatacaaggtgtcgtatatatgcagtacacccaaatgtgaaaatcactaccatatatatgagg 28425808  T
Q  445 aacctc 450  Q
    ||||||    
T  28425809 aacctc 28425814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 262 - 450
Target Start/End: Original strand, 16227285 - 16227472
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||| |||  |||||||||||||| | |||| || ||||||||| ||  | ||||||| ||||||||||          ||||| |||| |||||    
T  16227285 cagggccgttcctacgaattcggaggctcagttctgtaagtgaaaagagacct-taataaaataaaaacatatattttttttttaaagaacaattttcta 16227383  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    |||| |||||||||||||||||||||||||| |||||||||| | |||||| |  | ||||||| |||||  ||||||| |||||||||    
T  16227384 tttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacaccgatagatgaaaatcactactatatacataaggaacctc 16227472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 277 - 450
Target Start/End: Original strand, 7742063 - 7742238
Alignment:
Q  277 gaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnn-aaaagagcaatgttctatttatatttt-tta 374  Q
    |||| |||||| |||| |||| || |||||||||||| |||||||||| |||||| |||          |||||| |||||||||||||||||||| |||    
T  7742063 gaatccggaggttcggttctgtaagtgaaaagaggcccgtgataaaataaaaacacatattatttttttaaaagaacaatgttctatttatattttttta 7742162  T
Q  375 aaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    |||||||||||||| ||| | |||||||||| |||| | |  ||||||||  |||| ||||| |||||||||||||    
T  7742163 aaagataaatacaatgtgtcatatatatgcgttacatccaaaggtgaaaaatactatcgtatgcatgaggaacctc 7742238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 262 - 392
Target Start/End: Complemental strand, 8327801 - 8327674
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||| |||||||| | ||||||||||||| | |||| ||||||||||||  |||||||||||||||||| |||          |||| ||||||| ||||    
T  8327801 caggaccgtccctaaaaattcggaggctcagttctggaaatgaaaagagatcagtgataaaatcaaaacgtat---tttttttaaaaaagcaatgatcta 8327705  T
Q  362 tttatattttttaaaagataaatacaaggtg 392  Q
    |||||||||||||||||||||||| ||||||    
T  8327704 tttatattttttaaaagataaatataaggtg 8327674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 346 - 450
Target Start/End: Original strand, 11912757 - 11912861
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 445  Q
    ||||| |||||||||||||| ||||   |||| |||||||||| |||||||||||||||  |||| | |  | ||||||| |||||||||||||| ||||    
T  11912757 aaagaacaatgttctatttaaatttaaaaaaaaataaatacaaagtgccgtatatatgcaatacatccaaagatgaaaatcactaccgtatacataagga 11912856  T
Q  446 acctc 450  Q
    |||||    
T  11912857 acctc 11912861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 450
Target Start/End: Complemental strand, 37182739 - 37182668
Alignment:
Q  379 ataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    |||||||||||||| |||||||||||  |||||| |   |||||||| ||||||||||||||||||||||||    
T  37182739 ataaatacaaggtgtcgtatatatgcaatacacccaaaagtgaaaatcactaccgtatacatgaggaacctc 37182668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 425
Target Start/End: Complemental strand, 42029247 - 42029168
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaat 425  Q
    ||||| |||||||||||||| ||||||||||||||||||| |||||| | |||| |||  |||||||||  |||||||||    
T  42029247 aaagaacaatgttctatttaaattttttaaaagataaatataaggtgtcatatacatgttgtacacctaaaggtgaaaat 42029168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 386
Target Start/End: Original strand, 22727391 - 22727497
Alignment:
Q  277 gaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatattttttaaa 376  Q
    ||||||||||||||| | ||| || ||||||||||| ||| ||||||| ||||| |||          |||||| |||||||||||||| ||||||||||    
T  22727391 gaattcggaggctcgacgctgtaagtgaaaagaggcaagtaataaaataaaaacgtat---tttttttaaaagaacaatgttctatttaaattttttaaa 22727487  T
Q  377 agataaatac 386  Q
    ||||||||||    
T  22727488 agataaatac 22727497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 402
Target Start/End: Original strand, 11952588 - 11952643
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatat 402  Q
    ||||| |||||||||||||| |||||||||||||| ||||||| ||| |||||||||    
T  11952588 aaagaacaatgttctatttaaattttttaaaagat-aatacaaagtgtcgtatatat 11952643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 442
Target Start/End: Original strand, 22727530 - 22727598
Alignment:
Q  374 aaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatga 442  Q
    ||||||||||||| | ||| ||||||||||||||||||| |   |||||||| |||||| |||||||||    
T  22727530 aaaagataaatactatgtgacgtatatatgcggtacacccaaaagtgaaaatcactaccatatacatga 22727598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 392
Target Start/End: Complemental strand, 10252511 - 10252472
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtg 392  Q
    ||||||| ||||| ||||||||||||||||||||||||||    
T  10252511 aatgttcaatttaaattttttaaaagataaatacaaggtg 10252472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 2e-75; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 27079197 - 27078996
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||          |||||||||||||||||    
T  27079197 cagggccgtccctgagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtat-tttttttttaaaagagcaatgttcta 27079099  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| ||||||||||||    
T  27079098 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatgactactgtatacatgaggaacccccacctaacacc 27078999  T
Q  462 aaa 464  Q
    |||    
T  27078998 aaa 27078996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 270 - 464
Target Start/End: Original strand, 34756289 - 34756481
Alignment:
Q  270 tccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatatt 369  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||    
T  34756289 tccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacata--attttttttaaaagagcaatgttctatttatatt 34756386  T
Q  370 ttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||| ||||    
T  34756387 ttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaacaaa 34756481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 261 - 464
Target Start/End: Original strand, 36187794 - 36187994
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| | |          |||||||| |||||||    
T  36187794 gcagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgttt---tttttttaaaagagcgatgttct 36187890  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||    
T  36187891 atttatattttttaaaatataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagaaacctccacctaacac 36187990  T
Q  461 caaa 464  Q
    ||||    
T  36187991 caaa 36187994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 15480006 - 15480204
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||           ||||| | ||||||||    
T  15480006 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacatatttttttt----aaagaccgatgttcta 15480101  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||| || |||||||||||||||||||| ||||||||||| ||||||||||||    
T  15480102 tttatattttttaaaagataaatacaagatgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatgcatgaggaacccccacctaacacc 15480201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 16591990 - 16592189
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||| |||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||          |||||||||||||||||    
T  16591990 cagggccgtccttgagaatttggaggctcggctctgagaatgaaaagaggccaatgataaaatcaaaacatat---tttttttaaaagagcaatgttcta 16592086  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||| ||||||||||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||| |||||||||| ||||||||||||    
T  16592087 tttatattttctaaaagataaatacagggtgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatatatgaggaacccccacctaacacc 16592186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 266 - 464
Target Start/End: Complemental strand, 19523380 - 19523184
Alignment:
Q  266 gccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattta 365  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| | |           |||||||  |||||||||||    
T  19523380 gccgtccctgagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgtgtttttttttt--aaagagcggtgttctattta 19523283  T
Q  366 tattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||| |||||||||||||||    
T  19523282 tattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 19523184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 38869279 - 38869478
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||||||| |||| ||||||||||||| |||          |||||||||||||||||    
T  38869279 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggtcagttataaaatcaaaacgtat---tttttttaaaagagcaatgttcta 38869375  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| |  ||||||||||||||||||||||||||| |||| ||||||||||||    
T  38869376 tttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaacacc 38869475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 267 - 464
Target Start/End: Complemental strand, 2275070 - 2274875
Alignment:
Q  267 ccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttat 366  Q
    |||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||| |||          |||||||| |||||||||||||    
T  2275070 ccgtccctgagaattcggaggctcggttctgggaatgaaaagaggccagtgataaaatcaaaacgtat--ttttttttaaaagagcgatgttctatttat 2274973  T
Q  367 attttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    |||||||||||||||||||||||||  ||||||||||| ||||||| || ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  2274972 attttttaaaagataaatacaaggtatcgtatatatgcagtacacccagaggtgaaaatgactaccgtatacacgaggaacccccacctaacaccaaa 2274875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 16198709 - 16198909
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||| ||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||          |||||  ||||||||||    
T  16198709 cagggccttccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaaag--caatgttcta 16198806  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| |||||| |||||||||||| |||||| |  |||||||||||||||||||||||||||||||| ||||||||||||    
T  16198807 tttatattttttaaaagataaatataaggtgtcgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 16198906  T
Q  462 aaa 464  Q
    |||    
T  16198907 aaa 16198909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 261 - 464
Target Start/End: Complemental strand, 9364477 - 9364276
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||||  |||| ||||||||||||||| ||||||  ||||||||||||||||||||||||||||||| |||          |||||  |||||||||    
T  9364477 gcagggccacccctaagaattcggaggctcagctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttttaaaag--caatgttct 9364380  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||| ||||||||||     
T  9364379 atttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacat 9364280  T
Q  461 caaa 464  Q
    ||||    
T  9364279 caaa 9364276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 265 - 464
Target Start/End: Complemental strand, 30854511 - 30854314
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    |||||||||||| |||| |||||||||||||||  |||||||| ||| ||| |||||||| ||||| |||          ||||||||||||||||||||    
T  30854511 ggccgtccctgataatttggaggctcggctctgggaatgaaaaaaggtcagcgataaaattaaaacgtat--ttttttttaaaagagcaatgttctattt 30854414  T
Q  365 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||| ||||||||||||||||| |||||||||||||||    
T  30854413 atattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactatcgtatacatgaggaacccccacctaacaccaaa 30854314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 262 - 444
Target Start/End: Original strand, 31194528 - 31194706
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||||| ||||||||||||||||||||  ||||||||||| ||||||||||||||||||| |||          |||||||||||||||||    
T  31194528 cagggccgtccctgaaaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgtat---ttcttttaaaagagcaatgttcta 31194624  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  31194625 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtaaacccagaggtgaaaat-actaccgtatacatgagg 31194706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 263 - 464
Target Start/End: Original strand, 28822253 - 28822457
Alignment:
Q  263 agggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnn---aaaagagcaatgttc 359  Q
    |||||||||||| |||||||||||| |||||| ||  ||||||||||||  ||||||||||||||||| |||             |||||||||||||||    
T  28822253 agggccgtccctaagaattcggaggttcggctttgggaatgaaaagaggttagtgataaaatcaaaacgtattttttttttttttaaaagagcaatgttc 28822352  T
Q  360 tatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaaca 459  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||||||||||||| ||||| ||||||||||    
T  28822353 tatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgatgaacccccacctaaca 28822452  T
Q  460 ccaaa 464  Q
    |||||    
T  28822453 ccaaa 28822457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 261 - 464
Target Start/End: Original strand, 16799239 - 16799442
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaa-tgttc 359  Q
    |||||||||||||| ||||||||||||||||||||||  |||||||||| | |||||||||||||||||| |||          ||||||| || |||||    
T  16799239 gcagggccgtccctaagaattcggaggctcggctctgggaatgaaaagatgtcagtgataaaatcaaaacgtat-tttttttttaaaagagtaaatgttc 16799337  T
Q  360 tatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaaca 459  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||| |  ||||||||||| |||||||||||||||||||| |||| |||||    
T  16799338 tatttatattttttaaaaaataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacccccacataaca 16799437  T
Q  460 ccaaa 464  Q
    |||||    
T  16799438 ccaaa 16799442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 22986473 - 22986657
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||           |||||||||||||||||    
T  22986473 cagggccgtccgtgagaattcggaggctcagctctgagaatgaaaagaggccagtgataaaatcaaaacgta--attttttttaaaagagcaatgttcta 22986570  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacc 448  Q
    || ||||||||||||||| |||||||| ||| ||||||||||||||||||| |  ||||||||||||||||||||||||||| ||||    
T  22986571 ttaatattttttaaaagacaaatacaaagtgtcgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgagaaacc 22986657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 27924267 - 27924067
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||  || ||||||||| |||||| |||||| ||||||||||||||||||||||||||||||| |||          |||| |||||||  |||    
T  27924267 cagggccgtttctaagaattcgggggctcgactctgagaatgaaaagaggccagtgataaaatcaaaacgtat--ttttttaaaaaaaagcaatgaccta 27924170  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| | |  ||| |||||||||||||||||||||||||||  || |||||||||    
T  27924169 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtaaaaatgactaccgtatacatgaggaacgcccgcctaacacc 27924070  T
Q  462 aaa 464  Q
    |||    
T  27924069 aaa 27924067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 7671118 - 7670909
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnn------aaaagagcaat 355  Q
    ||||||||||| | ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||                |||| ||||||    
T  7671118 cagggccgtccttaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttttaaaaaaaaaaagcaat 7671019  T
Q  356 gttctatttatatttttt-aaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacc 454  Q
    |||||||||||||||||| |||||||||||| |||||||||||||| | ||||||||| |  |||||||||||||||||||||||||||| | | |||||    
T  7671018 gttctatttatatttttttaaaagataaatataaggtgccgtatatttacggtacacccaaaggtgaaaatgactaccgtatacatgaggtatccccacc 7670919  T
Q  455 taacaccaaa 464  Q
    ||||||||||    
T  7670918 taacaccaaa 7670909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 262 - 444
Target Start/End: Original strand, 31881348 - 31881528
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||||| ||||  ||||||||||||||  ||||||||| || |||| ||||||||||||| | |          |||||||||||||||||    
T  31881348 cagggccgtccctgaaaatttagaggctcggctctgggaatgaaaagtggtcagtaataaaatcaaaacgttt-tttttttttaaaagagcaatgttcta 31881446  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||| | || | ||||||| ||||||||||||||||||    
T  31881447 tttatattttttaaaagataaatacacggtgccgtatatatgcggaacatccagagatgaaaat-actaccgtatacatgagg 31881528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 350 - 460
Target Start/End: Original strand, 40389537 - 40389647
Alignment:
Q  350 agcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacct 449  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| | |  ||||||||||||||||||||  ||||||||||     
T  40389537 agcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatttatgaggaaccc 40389636  T
Q  450 ccacctaacac 460  Q
    |||||||||||    
T  40389637 ccacctaacac 40389647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 345 - 448
Target Start/End: Original strand, 23284058 - 23284161
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||| ||||||||||||||||||| |  | ||||||||||||||||||||||||||    
T  23284058 aaaagagcaatgttctatttatattttttaaagactaaatacaaggtgtcgtatatatgcggtacacccaaagatgaaaatgactaccgtatacatgagg 23284157  T
Q  445 aacc 448  Q
    ||||    
T  23284158 aacc 23284161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 346 - 427
Target Start/End: Complemental strand, 7338102 - 7338021
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatga 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||    
T  7338102 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacctaaaggtgaaaatga 7338021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 450
Target Start/End: Complemental strand, 34426007 - 34425902
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||| | ||||||||  | | ||||| | ||||||||||||||||    
T  34426007 aaaagaacaatgttctatttcaattttttaaaagataaatacaaggtgccgtatatatgtgatacacctaaagattaaaatcattaccgtatacatgagg 34425908  T
Q  445 aacctc 450  Q
    ||||||    
T  34425907 aacctc 34425902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 446
Target Start/End: Original strand, 36868872 - 36868973
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| ||||||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||| |   |||||||| ||||||||||||||||||    
T  36868872 aaaagaacaatgttctatttaatttttttaaaagataaatacaaggtgtcgtatatatgtggtacacccaaatgtgaaaatcactaccgtatacatgagg 36868971  T
Q  445 aa 446  Q
    ||    
T  36868972 aa 36868973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 450
Target Start/End: Original strand, 1366522 - 1366627
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |||||||| |||||||||||||| ||  ||||||||||| ||||||||   |||||||| ||||||||||| ||||||    
T  1366522 aaaagaacaatgttctatttaaattttttataagataaatacaagatgtggtatatatgcgatacacctaaatgtgaaaatcactaccgtatatatgagg 1366621  T
Q  445 aacctc 450  Q
    ||||||    
T  1366622 aacctc 1366627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 346 - 450
Target Start/End: Original strand, 14318382 - 14318486
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 445  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||| | |||| | |    ||||||| |||||||||||||||||||    
T  14318382 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacatccaaaaatgaaaatcactaccgtatacatgagga 14318481  T
Q  446 acctc 450  Q
    |||||    
T  14318482 acctc 14318486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 345 - 450
Target Start/End: Original strand, 2024638 - 2024743
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| ||||||| |||||||||||||| |||||||||||||| | |||||| |  | ||||||| |||||| |||||||||||    
T  2024638 aaaagaacaatgttctatttaaatttttttaaagataaatacaatgtgccgtatatatgtgatacacccaaagatgaaaatcactaccatatacatgagg 2024737  T
Q  445 aacctc 450  Q
    | ||||    
T  2024738 atcctc 2024743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 353 - 450
Target Start/End: Original strand, 2530901 - 2530998
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    |||||||||||||  ||||||||||||||||||||| ||| ||||||||| ||||||| | |  ||||||||| ||||| ||||||||||||||||||    
T  2530901 aatgttctatttaagttttttaaaagataaatacaatgtgtcgtatatatacggtacatccaaaggtgaaaatcactactgtatacatgaggaacctc 2530998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 345 - 452
Target Start/End: Complemental strand, 10407565 - 10407458
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| ||||||||||||||||| |||||||| |||| |||||  ||||| |||   |||||||| |||||||||| |||||||    
T  10407565 aaaagaacaatgttctatttaaattttttaaaagataaacacaaggtgtcgtacatatgttgtacatctaaaagtgaaaattactaccgtatgcatgagg 10407466  T
Q  445 aacctcca 452  Q
    || |||||    
T  10407465 aatctcca 10407458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 450
Target Start/End: Complemental strand, 33037884 - 33037779
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| ||||||| |||||| ||||||||||||||||||||||| |  ||||||||||  ||||||| |  ||||||||  | ||||||||||||||||    
T  33037884 aaaagaacaatgttttatttaaattttttaaaagataaatacaagatatcgtatatatgttgtacacccaaaggtgaaaaccattaccgtatacatgagg 33037785  T
Q  445 aacctc 450  Q
    ||||||    
T  33037784 aacctc 33037779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 346 - 450
Target Start/End: Complemental strand, 2412191 - 2412087
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 445  Q
    ||||| |||||||||||||| ||||||||||| |||||||||| ||| |||||||||||| | || | |   |||||||| ||||| |||||||||||||    
T  2412191 aaagaacaatgttctatttaaattttttaaaaaataaatacaaagtgtcgtatatatgcgatgcatccaaatgtgaaaatcactactgtatacatgagga 2412092  T
Q  446 acctc 450  Q
    |||||    
T  2412091 acctc 2412087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 353 - 445
Target Start/End: Original strand, 26718953 - 26719045
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 445  Q
    ||||||||||||| | |||||||||||||||||||| ||| |||||||||||| |||||  |  ||||||||| ||||||| |||||||||||    
T  26718953 aatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgagga 26719045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 353 - 445
Target Start/End: Original strand, 26988697 - 26988789
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 445  Q
    ||||||||||||| | |||||||||||||||||||| ||| |||||||||||| |||||  |  ||||||||| ||||||| |||||||||||    
T  26988697 aatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgagga 26988789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 450
Target Start/End: Original strand, 40794257 - 40794428
Alignment:
Q  277 gaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatattttttaaa 376  Q
    ||||||||||||||||||||| || |||||||||||  || ||||||| ||||| | |          |||||| ||||||| |||||| ||||||||||    
T  40794257 gaattcggaggctcggctctgtaagtgaaaagaggctcgtaataaaataaaaacgttt--ttttttttaaaagaacaatgttttatttaaattttttaaa 40794354  T
Q  377 agataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    ||| |||||||| | |||||| ||||  | |||||| |  ||||||||| ||||||||||||||||| ||||||    
T  40794355 agacaaatacaaagagccgtaaatatatgatacaccaaaaggtgaaaatcactaccgtatacatgagaaacctc 40794428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 353 - 447
Target Start/End: Complemental strand, 24395835 - 24395741
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaac 447  Q
    ||||||||||||| ||||||||||||||||||||||||||  |||||||| |  |||| | |  ||||||||| || |||||||| |||||||||    
T  24395835 aatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatacaatacatccaaaggtgaaaatcaccaccgtatagatgaggaac 24395741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 450
Target Start/End: Original strand, 11242314 - 11242419
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| ||||||||||||||  |||||||||||||||||||||  ||  ||||||||| | |||| | |  | || |||| ||||||||||||||||||    
T  11242314 aaaagaacaatgttctatttaatttttttaaaagataaatacaaaatgatgtatatatgtgatacaaccaaagatggaaatcactaccgtatacatgagg 11242413  T
Q  445 aacctc 450  Q
    ||||||    
T  11242414 aacctc 11242419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 347 - 403
Target Start/End: Original strand, 22648734 - 22648790
Alignment:
Q  347 aagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg 403  Q
    |||| |||||||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  22648734 aagaacaatgttctatttaaattttttaaaagataaatacaatgtgtcgtatatatg 22648790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 262 - 330
Target Start/End: Original strand, 23283943 - 23284011
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaac 330  Q
    ||||||||||||||||||||| ||||||| | | |   |||||||||||||||||||||||||||||||    
T  23283943 cagggccgtccctgagaattcagaggctcagttttaggaatgaaaagaggccagtgataaaatcaaaac 23284011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 346 - 450
Target Start/End: Original strand, 41911614 - 41911718
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 445  Q
    ||||| |||||||| | |||  |||||||||||| |||||||||||| |||||||| |||||||||| |   || ||||| |||| |||||| |||||||    
T  41911614 aaagaacaatgttcaacttaatttttttaaaagagaaatacaaggtgtcgtatataagcggtacacccaaaagtaaaaatcactatcgtatatatgagga 41911713  T
Q  446 acctc 450  Q
    |||||    
T  41911714 acctc 41911718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 392
Target Start/End: Complemental strand, 606258 - 606211
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtg 392  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||    
T  606258 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtg 606211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 440
Target Start/End: Complemental strand, 10543769 - 10543682
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacat 440  Q
    ||||||| | ||| ||||||||||||||||||| ||||||  ||||||||||| |||| | |  ||||||||| ||||||||||||||    
T  10543769 aatgttccacttaaattttttaaaagataaatataaggtgatgtatatatgcgatacatccaaaggtgaaaatcactaccgtatacat 10543682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 261 - 327
Target Start/End: Original strand, 40389452 - 40389518
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaa 327  Q
    |||||| | ||||| ||||||||||||||||||||||  |||||||||| | |||||||||||||||    
T  40389452 gcagggtcatccctaagaattcggaggctcggctctgggaatgaaaagatgtcagtgataaaatcaa 40389518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 449
Target Start/End: Complemental strand, 15639724 - 15639643
Alignment:
Q  368 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacct 449  Q
    |||||| |||||||||||||||||| |||||||||||| |||| | |  | ||||||| |||  ||||||||| ||||||||    
T  15639724 tttttttaaagataaatacaaggtgacgtatatatgcgatacatccaaagatgaaaatcactgtcgtatacataaggaacct 15639643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 389
Target Start/End: Complemental strand, 27530587 - 27530543
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaag 389  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  27530587 aaaagaacaatgttctatttaaattttttaaaagattaatacaag 27530543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 352 - 412
Target Start/End: Complemental strand, 17345053 - 17344993
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 412  Q
    |||||||||||||| |||||||| |  ||||||||||| || | | |||||||||||||||    
T  17345053 caatgttctatttaaattttttatataataaatacaagatgtcatgtatatgcggtacacc 17344993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 352 - 388
Target Start/End: Complemental strand, 22875039 - 22875003
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaa 388  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  22875039 caatattctatttaaattttttaaaagataaatacaa 22875003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 35080766 - 35080806
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaata 385  Q
    |||||| ||||||| |||||| |||||||||||||||||||    
T  35080766 aaaagaacaatgttttatttaaattttttaaaagataaata 35080806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 141; Significance: 1e-73; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 54619121 - 54619321
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||           |||||||||||||||||    
T  54619121 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaagccaatgataaaatcaaaacata--attttttttaaaagagcaatgttcta 54619218  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||    
T  54619219 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 54619318  T
Q  462 aaa 464  Q
    |||    
T  54619319 aaa 54619321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 38681011 - 38681211
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||           |||||||||||||||||    
T  38681011 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacata--attttttttaaaagagcaatgttcta 38681108  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| | || |||||||||||||||||||||||||||||| | ||||||||||||    
T  38681109 tttatattttttaaaagataaatacaaggtgccgtatgtatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaaaccccacctaacacc 38681208  T
Q  462 aaa 464  Q
    |||    
T  38681209 aaa 38681211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 21582960 - 21582759
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||| |||          |||||| ||||||| ||    
T  21582960 cagggccgtccctgagaattcggaggctcggctttgggaatgaaaagaggccagtgataaaatcaaaacgtat-tttttttttaaaagaacaatgtttta 21582862  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||    
T  21582861 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 21582762  T
Q  462 aaa 464  Q
    |||    
T  21582761 aaa 21582759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 36715942 - 36716143
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |         |||||||||||||||||    
T  36715942 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaataaaaacata-atttttatttaaaagagcaatgttcta 36716040  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||| ||||||||| ||||| ||| ||||||||||||    
T  36716041 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaacgaccaccgtatacgtgagggacccccacctaacacc 36716140  T
Q  462 aaa 464  Q
    |||    
T  36716141 aaa 36716143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 261 - 464
Target Start/End: Original strand, 27078485 - 27078687
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| |         |||| |||||||||||    
T  27078485 gcagggccgtccctgagaattcggaggcttggctctggaaatgaaaagaggtcagtgataaaatcaaaacata-atttttttttaaaaaagcaatgttct 27078583  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||| || ||||||||||||||||||||||||||| |||| | |||||||||    
T  27078584 atttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacccctacctaacac 27078683  T
Q  461 caaa 464  Q
    ||||    
T  27078684 caaa 27078687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 261 - 464
Target Start/End: Original strand, 27084282 - 27084484
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| |         |||| |||||||||||    
T  27084282 gcagggccgtccctgagaattcggaggcttggctctggaaatgaaaagaggtcagtgataaaatcaaaacata-atttttttttaaaaaagcaatgttct 27084380  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||| || ||||||||||||||||||||||||||| |||| | |||||||||    
T  27084381 atttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacccctacctaacac 27084480  T
Q  461 caaa 464  Q
    ||||    
T  27084481 caaa 27084484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 47467872 - 47467672
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| | |           ||||||| ||||||||    
T  47467872 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtgtttttttttt--aaagagcgatgttcta 47467775  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||| ||||||||||||    
T  47467774 tttatattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 47467675  T
Q  462 aaa 464  Q
    |||    
T  47467674 aaa 47467672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 8073257 - 8073455
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||          ||||||| |||||||||    
T  8073257 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtat---tttttttaaaagagtaatgttcta 8073353  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |   ||||||||||||||||||||||||||||||| |||| |||||||    
T  8073354 tttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacc-ccacataacacc 8073452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 263 - 464
Target Start/End: Original strand, 3953816 - 3954014
Alignment:
Q  263 agggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctat 362  Q
    ||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||| ||||  |||          |||||| |||||||||||    
T  3953816 agggccgtccctgagaattcggaggttccgctctggaaatgaaaagaggccagtgataaaattaaaatgtat---tttttttaaaagaacaatgttctat 3953912  T
Q  363 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacca 462  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||| |||||||||||||    
T  3953913 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgaaaaccgtatacatgaggaacccccacctaacacca 3954012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 43207157 - 43207355
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| |||||| |||||||||||||||  ||||||||||||||||||||||| | ||||| |||          |||||||||||||||||    
T  43207157 cagggccgtccctaagaatttggaggctcggctctgggaatgaaaagaggccagtgataaattaaaaacgtat---tttttttaaaagagcaatgttcta 43207253  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| | |  |||||||||||||||||||||||||||||||| ||||||||||||    
T  43207254 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacatc-aaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 43207352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 42098989 - 42098789
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||||| |||||| |||| | |||||||||||||||||||||||||||||||  | |          |||||||| ||||||||    
T  42098989 cagggccgtccctgagaattcgaaggctcagctcgggaaatgaaaagaggccagtgataaaatcaaaa--tgtctttttttttaaaagagcgatgttcta 42098892  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||  || |||||||||||||||||||||||||||||||| | || |||||||    
T  42098891 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatacatgaggaacccctacttaacacc 42098792  T
Q  462 aaa 464  Q
    |||    
T  42098791 aaa 42098789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 261 - 464
Target Start/End: Original strand, 50939151 - 50939351
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||          |||| ||||||| |||    
T  50939151 gcagggccgtccctaagaattcgggggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtat---ttttttaaaaaaagcaatgatct 50939247  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    ||||||||||||||||||||||||| ||||||||||||||||  |||||||| |  ||| |||||||||||||||||||||||||||| || ||||||||    
T  50939248 atttatattttttaaaagataaatataaggtgccgtatatatatggtacacccaaaggtaaaaatgactaccgtatacatgaggaacccccgcctaacac 50939347  T
Q  461 caaa 464  Q
    ||||    
T  50939348 caaa 50939351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 34290554 - 34290754
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||| | ||||||||||||||||||||||  |||||||||| | |||||||||||||||||| |||          |||| | ||||||||||    
T  34290554 cagggccgtccttaagaattcggaggctcggctctgggaatgaaaagaagtcagtgataaaatcaaaacgtat--ttttttttaaaaaaacaatgttcta 34290651  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||||||| ||||||||||||    
T  34290652 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacccccacctaacacc 34290751  T
Q  462 aaa 464  Q
    |||    
T  34290752 aaa 34290754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 266 - 464
Target Start/End: Complemental strand, 44708660 - 44708465
Alignment:
Q  266 gccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattta 365  Q
    ||||||||| |||||||||||||||  |||||  ||||||||||||||||||||||||||||||| |||          |||| || |||||||||||||    
T  44708660 gccgtccctaagaattcggaggctcaactctgggaatgaaaagaggccagtgataaaatcaaaacgtat---ttttttaaaaaaagaaatgttctattta 44708564  T
Q  366 tattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| |  |||||||||||||||||||||||||||||||| |||||||||||||||    
T  44708563 tattttttaaaagataaatataaggtgccgtatatatccggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 44708465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 266 - 460
Target Start/End: Complemental strand, 37168551 - 37168359
Alignment:
Q  266 gccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattta 365  Q
    ||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||          |||| | ||||||||||||||    
T  37168551 gccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtat--ttttttttaaaaaaacaatgttctattta 37168454  T
Q  366 tattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    |||||||||||||||||||| ||||||||||||||||| |||| ||| |  |||||||||||||||||||||||||||||||  |||||||||||    
T  37168453 tattttttaaaagataaatataaggtgccgtatatatgtggtatacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacac 37168359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 53506802 - 53507002
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||| | |||||||| |||||||||||||  |||||| ||||||||||||||||||||||||||||          |||| | ||||||||||    
T  53506802 cagggccgtcc-taagaattcgaaggctcggctctgggaatgaagagaggccagtgataaaatcaaaacatattttttttttaaaaaaa-caatgttcta 53506899  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||| |  ||||||||||||||||||||||||||| |||| ||||||||||||    
T  53506900 tttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaacacc 53506999  T
Q  462 aaa 464  Q
    |||    
T  53507000 aaa 53507002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 265 - 464
Target Start/End: Original strand, 53149235 - 53149432
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    ||||||| |||||||||||||||||| | || |  ||||||||||| ||||||||||||||||||| | |          |||||||| |||||||||||    
T  53149235 ggccgtctctgagaattcggaggctcagttcggggaatgaaaagagaccagtgataaaatcaaaacgttt--ttttttttaaaagagcgatgttctattt 53149332  T
Q  365 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  || | | |||||||||||||||||||||||||||| |||||||||||||||    
T  53149333 atattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagagataaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 53149432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 261 - 464
Target Start/End: Original strand, 54407072 - 54407275
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagag-caatgttc 359  Q
    |||||||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||||||||| | |          |||| |  ||||||||    
T  54407072 gcagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaaatcaaaacgtttttttttttaaaaaaaaaacaatgttc 54407171  T
Q  360 tatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaaca 459  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| | |  |||||||||||||||||||||||| || |||| ||||||||||    
T  54407172 tatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacat-agtaacccccacctaaca 54407270  T
Q  460 ccaaa 464  Q
    |||||    
T  54407271 ccaaa 54407275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 265 - 444
Target Start/End: Complemental strand, 36606149 - 36605973
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    |||||||||||| |||||||||| ||||||||| ||||||||||||| |||||||||||||||||| |||          || |||||||||||||||||    
T  36606149 ggccgtccctgaaaattcggaggttcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtat---tttttttaatagagcaatgttctattt 36606053  T
Q  365 atattttttaaaa-gataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| || | ||||||| ||||||||||||||||||    
T  36606052 atattttttaaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaat-actaccgtatacatgagg 36605973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 274 - 464
Target Start/End: Complemental strand, 18372658 - 18372467
Alignment:
Q  274 tgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatatttttt 373  Q
    |||||||||||||||||| | |||  |||||||||||| |||||||||||||||||| |||          |||||||||||||||||||||||||||||    
T  18372658 tgagaattcggaggctcgacactgggaatgaaaagaggtcagtgataaaatcaaaacgtat---tttttttaaaagagcaatgttctatttatatttttt 18372562  T
Q  374 aaaagataaatacaaggtgccgtatatat----gcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    ||||||||||||||||||| |||||||||    |||||||||  || |||||||||||||||||||||||||||||| | ||| |||||||||||    
T  18372561 aaaagataaatacaaggtgtcgtatatatgcgcgcggtacacacagaggtgaaaatgactaccgtatacatgaggaatccccatctaacaccaaa 18372467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 261 - 453
Target Start/End: Original strand, 50258541 - 50258731
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||| ||||||||||||||||||||||||||  || ||||||||  ||||||||||||||||||||||          |||||||| |||||||    
T  50258541 gcagggccgttcctgagaattcggaggctcggctctgggaacgaaaagagatcagtgataaaatcaaaacatat---ttttttaaaaagagcgatgttct 50258637  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctag-tggtgaaaatgactaccgtatacatgaggaacctccac 453  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  |  ||||||||||||||  |||| ||||||||||| ||||    
T  50258638 atttatattttttaaaaaataaatacaaggtgtcgtatatatgcggtacacccggagggtgaaaatgactattgtatgcatgaggaacccccac 50258731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 345 - 464
Target Start/End: Original strand, 9878686 - 9878805
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |  |||||||||||||| ||||||||| |||    
T  9878686 aaaagagcaatattctatttatattttttaaaagataaatataaggtgcagtatatatgcggtacacccaaaggtgaaaatgactatcgtatacataagg 9878785  T
Q  445 aacctccacctaacaccaaa 464  Q
    |||| ||| ||||| |||||    
T  9878786 aacccccatctaacgccaaa 9878805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 381 - 462
Target Start/End: Original strand, 29620423 - 29620504
Alignment:
Q  381 aaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacca 462  Q
    |||||||||||||||||||||||||||| | | || |||||||||||||||||||||||||||||||| |||||||||||||    
T  29620423 aaatacaaggtgccgtatatatgcggtatatccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacca 29620504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 450
Target Start/End: Original strand, 54574826 - 54574931
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |||||| |||| ||||||||||||| |||||||||||||||||||| |   || ||||| |||||| |||||||||||    
T  54574826 aaaagaacaatgttctatttaaatttttcaaaatataaatacaaggtaccgtatatatgcggtacacccaaaagtaaaaatcactaccatatacatgagg 54574925  T
Q  445 aacctc 450  Q
    ||||||    
T  54574926 aacctc 54574931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 464
Target Start/End: Complemental strand, 48157310 - 48157127
Alignment:
Q  268 cgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttata 367  Q
    ||||||| ||||||||||||||||| || |  ||| |||||||||||||||||||||||||||| ||          ||||  |||||| ||||||||||    
T  48157310 cgtccctaagaattcggaggctcggttccgggaataaaaagaggccagtgataaaatcaaaacacat---ttttaaaaaaaatgcaatgatctatttata 48157214  T
Q  368 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    |||||||||||||||||| ||||||          |||||||||| |  ||||||||||||||| |||||||||||||||| |||| ||||| ||||    
T  48157213 ttttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactactgtatacatgaggaacccccacttaacatcaaa 48157127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 353 - 450
Target Start/End: Complemental strand, 8420425 - 8420328
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||| |   |||||||| ||| ||||||| | ||||||||||    
T  8420425 aatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttgtacacccaaatgtgaaaatcactgccgtatatacgaggaacctc 8420328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 262 - 324
Target Start/End: Original strand, 29620364 - 29620426
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaat 324  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  29620364 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaat 29620426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 353 - 450
Target Start/End: Original strand, 32319162 - 32319259
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    ||||||||||||| |||||||||||||||||||||| |||  |||||||||||||||||| |  ||||||||| |||| | |||| | ||||||||||    
T  32319162 aatgttctatttaaattttttaaaagataaatacaaagtgttgtatatatgcggtacacccaaaggtgaaaattactatcttatatacgaggaacctc 32319259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 353 - 443
Target Start/End: Original strand, 28689368 - 28689458
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgag 443  Q
    ||||||||||||| |||||  |||||||||||||||||||||||||||||||| || | | |  ||||||||| ||| |||||||||||||    
T  28689368 aatgttctatttaaattttcaaaaagataaatacaaggtgccgtatatatgcgatatatccaaaggtgaaaatcactgccgtatacatgag 28689458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 357 - 410
Target Start/End: Original strand, 23641329 - 23641382
Alignment:
Q  357 ttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtaca 410  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  23641329 ttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtaca 23641382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 345 - 414
Target Start/End: Complemental strand, 42453511 - 42453442
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccta 414  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| ||||||||    
T  42453511 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacaccta 42453442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 346 - 443
Target Start/End: Complemental strand, 49393195 - 49393099
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgag 443  Q
    ||||| ||||||||| |||| |||||||||||||||||||||||| | ||||||||||  ||||||| |  ||| ||||| |||||||||||||||||    
T  49393195 aaagaacaatgttctctttaaattttttaaaagataaatacaaggcgtcgtatatatg-tgtacacccaaaggtaaaaattactaccgtatacatgag 49393099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 450
Target Start/End: Complemental strand, 25855527 - 25855424
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 445  Q
    ||||| |||||||||||||| |||||||||||||| ||||||||||| ||||||||||  || |||| |  | ||||||| ||||||||||||| || ||    
T  25855527 aaagaacaatgttctatttaaattttttaaaagat-aatacaaggtgtcgtatatatgtagtgcacccaaagttgaaaatcactaccgtatacacgaaga 25855429  T
Q  446 acctc 450  Q
    |||||    
T  25855428 acctc 25855424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 450
Target Start/End: Complemental strand, 26279649 - 26279542
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgact--accgtatacatga 442  Q
    |||||| |||||||||||||| ||||||||||||||||||| |||||| |||||||||||  |||||| |  | ||||||| |||  ||  |||||||||    
T  26279649 aaaagaacaatgttctatttaaattttttaaaagataaatagaaggtgtcgtatatatgcaatacacccaaagatgaaaatcactacacattatacatga 26279550  T
Q  443 ggaacctc 450  Q
    ||||||||    
T  26279549 ggaacctc 26279542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 330
Target Start/End: Original strand, 48720429 - 48720497
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaac 330  Q
    ||||||||||||| |||||| |||||||||||||||  ||||||||||||  |||||||||||||||||    
T  48720429 cagggccgtccctaagaattgggaggctcggctctgggaatgaaaagaggtaagtgataaaatcaaaac 48720497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 450
Target Start/End: Complemental strand, 52374763 - 52374658
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |||||||   | |||||||||| ||| |||||| ||||| |||| |||  || |||||| |||||||||||||||| |    
T  52374763 aaaagaacaatgttctatttaaatttttttttaaataaatacaatgtgtcgtatagatgcgatacatctaaaggagaaaatcactaccgtatacatgaag 52374664  T
Q  445 aacctc 450  Q
    ||||||    
T  52374663 aacctc 52374658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 346 - 450
Target Start/End: Complemental strand, 790042 - 789938
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 445  Q
    ||||| |||| ||||||||| ||||||||||  |||||||||||||| | ||||||||  ||||||| |  ||| ||||| || ||| ||||||||||||    
T  790042 aaagaacaatcttctatttaaattttttaaacaataaatacaaggtgtcatatatatgttgtacacccaaaggtaaaaatcaccaccatatacatgagga 789943  T
Q  446 acctc 450  Q
    |||||    
T  789942 acctc 789938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 137; Significance: 2e-71; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 261 - 464
Target Start/End: Complemental strand, 6771990 - 6771787
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |           ||||||| |||||||    
T  6771990 gcagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtgttttttttttttaaagagcgatgttct 6771891  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||    
T  6771890 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacacgaggaacctccacctaacac 6771791  T
Q  461 caaa 464  Q
    ||||    
T  6771790 caaa 6771787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 44655936 - 44655737
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||           |||||||||||||||||    
T  44655936 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagagaccagtgataaaatcaaaacata---atttttttaaaagagcaatgttcta 44655840  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||||||||||||    
T  44655839 tttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaacacc 44655740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 261 - 464
Target Start/End: Complemental strand, 14146496 - 14146296
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| |||          |||||||| |||||||    
T  14146496 gcagggccgtccctgagaattcggaggctcggctcttggaatgaaaagaggccagtgataaaatcaaaacgtat---tttttttaaaagagcgatgttct 14146400  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||| |||||||||||    
T  14146399 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacac 14146300  T
Q  461 caaa 464  Q
    ||||    
T  14146299 caaa 14146296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 265 - 464
Target Start/End: Complemental strand, 50881621 - 50881426
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||  |||          ||||||||||||||||||||    
T  50881621 ggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaattaaaatctat----ttttttaaaagagcaatgttctattt 50881526  T
Q  365 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  50881525 atattttttaaaagataaatacaaggtgtcgtatatatgcggtacatctagaggtgaaaatgactacagtatacatgaggaacctccacctaacaccaaa 50881426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 5027746 - 5027545
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||||||||| |||          |||||||||||||||||    
T  5027746 cagggccgtccctgagaattcggaggctcgactcggggaatgaaaagaggccagtgataaaatcaaaacgtat-tttttttttaaaagagcaatgttcta 5027648  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||| |||| |||||||||| ||||||||||||    
T  5027647 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatagatgaggaacccccacctaacacc 5027548  T
Q  462 aaa 464  Q
    |||    
T  5027547 aaa 5027545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 23185622 - 23185423
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||| ||||||||||||||||||||||||    | ||||||||||||||||||||||||||||| |||          |||||||||||||||||    
T  23185622 cagggccgttcctgagaattcggaggctcggctcgaggattgaaaagaggccagtgataaaatcaaaacgtat---tttttttaaaagagcaatgttcta 23185526  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||| ||||||||||||    
T  23185525 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 23185426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 5316875 - 5316676
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||| ||||||||| |  |   |||||||||||| |||||||||||||||||| |||          |||||||||||||||||    
T  5316875 cagggccgtccctgagaatttggaggctcgaccttaggaatgaaaagaggtcagtgataaaatcaaaacgtat---tttttttaaaagagcaatgttcta 5316779  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||    
T  5316778 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 5316679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 268 - 460
Target Start/End: Complemental strand, 16140244 - 16140055
Alignment:
Q  268 cgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttata 367  Q
    ||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||| |||          |||||||  ||||||||||||||    
T  16140244 cgtccctgagaattcggaggctcggctctgggaatgaaaagaggccggtgataaaatcaaaacgtat---tttttttaaaagagtgatgttctatttata 16140148  T
Q  368 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||    
T  16140147 ttttttaaaagataaatacaaggtgttgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaatccccacctaacac 16140055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 4971536 - 4971735
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||| |||||||||||||| ||||||||| || |  ||||||||||| |||||||||||||||||||||||           ||||||||||||||||    
T  4971536 cagggctgtccctgagaattctgaggctcggttcggggaatgaaaagagaccagtgataaaatcaaaacatattttttttt---aaagagcaatgttcta 4971632  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |   ||||||||||||||||||||||||||||||| ||||||||||||    
T  4971633 tttatattttttaaaagataaatacaaggtaccgtatatatgcggtacacccataagtgaaaatgactaccgtatacatgaggaacccccacctaacacc 4971732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 17169151 - 17168952
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||          |||| ||||||||||||    
T  17169151 cagggccgtccctaagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtat---ttttttaaaaaaagcaatgttcta 17169055  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| ||||||  |||||||||||||||||| |  |||||||||||||||| ||||||||||||||| | ||||||||||    
T  17169054 tttatattttttaaaagataaatataaggtgttgtatatatgcggtacacccaaaggtgaaaatgactaccatatacatgaggaacccctacctaacacc 17168955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 262 - 439
Target Start/End: Original strand, 21740852 - 21741029
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||          |||||||||||||||||    
T  21740852 cagggccgtccttgagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaatgtatttttttttttaaaagagcaatgttcta 21740951  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtataca 439  Q
    ||| |||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||| ||||||    
T  21740952 tttgtattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccatataca 21741029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 19955912 - 19955713
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||           ||| ||||||| ||||    
T  19955912 cagggctgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgaattttttttt---aaaaagcaatgatcta 19955816  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||||||| ||||||||||||    
T  19955815 tttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacccccacctaacacc 19955716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 40501707 - 40501907
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| |||||||||||||||| |||||| |||||||||||| |||||||||||||||||| |||          |||| || |||| ||||    
T  40501707 cagggccgtccctaagaattcggaggctcgactctgagaatgaaaagaggtcagtgataaaatcaaaacgtat--tttttaaaaaaaaagtaatgatcta 40501804  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| |  ||| |||||||||||||||||||||| ||||||||||||||||||    
T  40501805 tttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaagaacctccacctaacacc 40501904  T
Q  462 aaa 464  Q
    |||    
T  40501905 aaa 40501907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 261 - 464
Target Start/End: Original strand, 27906645 - 27906834
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||         |||||||||||||||     
T  27906645 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaac--ataattttttttaaaagagcaatgttcc 27906742  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    |||||||||||||||||||||||||||||||||||             |||| || |||||||||||||||||||||||||||||||| |||||||||||    
T  27906743 atttatattttttaaaagataaatacaaggtgccg------------ccacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacac 27906830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 9172940 - 9173140
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||| | ||||  |||          ||||   ||||||||||    
T  9172940 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaattaaaaatgtatttttgttttaaaaaa--caatgttcta 9173037  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| | |  |||||||||||||||||||||||||||||||| ||||||||||||    
T  9173038 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 9173137  T
Q  462 aaa 464  Q
    |||    
T  9173138 aaa 9173140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 9180922 - 9181122
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||| | ||||  |||          ||||   ||||||||||    
T  9180922 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaattaaaaatgtatttttgttttaaaaaa--caatgttcta 9181019  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| | |  |||||||||||||||||||||||||||||||| ||||||||||||    
T  9181020 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 9181119  T
Q  462 aaa 464  Q
    |||    
T  9181120 aaa 9181122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 3406614 - 3406414
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||| ||||||||||||| |||||||| |||| |  |||||||||||| |||||||||||| ||||| | |          |||||||| ||||||||    
T  3406614 cagggctgtccctgagaatttggaggctcagctcggggaatgaaaagaggtcagtgataaaatgaaaacgttt--ttttttttaaaagagcgatgttcta 3406517  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||   | |||||||||||||||||||||||||||||||| ||||||||||||    
T  3406516 tttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 3406417  T
Q  462 aaa 464  Q
    |||    
T  3406416 aaa 3406414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 3440206 - 3440406
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||| ||||||||||||| |||||||| |||| |  |||||||||||| |||||||||||| ||||| | |          |||||||| ||||||||    
T  3440206 cagggctgtccctgagaatttggaggctcagctcggggaatgaaaagaggtcagtgataaaatgaaaacgttt--ttttttttaaaagagcgatgttcta 3440303  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||   | |||||||||||||||||||||||||||||||| ||||||||||||    
T  3440304 tttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 3440403  T
Q  462 aaa 464  Q
    |||    
T  3440404 aaa 3440406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 1366797 - 1366995
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||| ||  ||||| |||||||| ||||||  ||||||||||||||||||||||| | |||||||||            |||||||||||||||    
T  1366797 cagggccgtctctacgaatttggaggctcagctctgggaatgaaaagaggccagtgataaattgaaaacatattttttttt----aagagcaatgttcta 1366892  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  | ||||||||||||||||||||| |||||||| ||||||||||||    
T  1366893 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagatgaaaatgactaccgtatacacgaggaacccccacctaacacc 1366992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 265 - 464
Target Start/End: Original strand, 13913401 - 13913599
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    |||||||||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||  |||          |||| ||||||| |||||||    
T  13913401 ggccgtccctaagaattcggaggcttggctctgagaatgaaaagatgccagtgataaaatcaaaatgtat---tttttttaaaaaagcaatgatctattt 13913497  T
Q  365 atattttttaaaagataaatacaaggtgccg--tatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacca 462  Q
    ||||||||||||||||||||| ||| |||||  |||||||||||||||||||   |||||||||||||||||||||||||| |||| |||||||||||||    
T  13913498 atattttttaaaagataaatataagttgccgggtatatatgcggtacacctaaaagtgaaaatgactaccgtatacatgagaaacccccacctaacacca 13913597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 279 - 464
Target Start/End: Original strand, 41697072 - 41697254
Alignment:
Q  279 attcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatattttttaaaag 378  Q
    ||||||| |||||||||||  |||||||||||| |||||||||||||||||| |||          |||||||| |||||||||||||||||||||||||    
T  41697072 attcggaagctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtat---tttttttaaaagagcgatgttctatttatattttttaaaag 41697168  T
Q  379 ataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    |||||||||| ||  ||||||||||| ||||| | ||  ||||||||||||||||||||||||||||||| |||||||||||||||    
T  41697169 ataaatacaaagtatcgtatatatgcagtacatccagaagtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 41697254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 345 - 462
Target Start/End: Complemental strand, 27559752 - 27559635
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  27559752 aaaaaagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 27559653  T
Q  445 aacctccacctaacacca 462  Q
    |||| |||||||||||||    
T  27559652 aacccccacctaacacca 27559635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 262 - 437
Target Start/End: Complemental strand, 6889805 - 6889634
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||| ||| ||||||||||||||| ||||| |||||||||||| |||||||||||||||||| |||          |||||||||||||||||    
T  6889805 cagggccgtccttgaaaattcggaggctcggttctgagaatgaaaagaggtcagtgataaaatcaaaacgtat----ttttttaaaagagcaatgttcta 6889710  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtata 437  Q
    ||||||||||||||||||||||||||| ||  ||||||||||||||||| | || ||||||||||| | |||||||    
T  6889709 tttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaatgattgccgtata 6889634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 262 - 437
Target Start/End: Complemental strand, 6891651 - 6891480
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||| ||| ||||||||||||||| ||||| |||||||||||| |||||||||||||||||| |||          |||||||||||||||||    
T  6891651 cagggccgtccttgaaaattcggaggctcggttctgagaatgaaaagaggtcagtgataaaatcaaaacgtat----ttttttaaaagagcaatgttcta 6891556  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtata 437  Q
    ||||||||||||||||||||||||||| ||  ||||||||||||||||| | || ||||||||||| | |||||||    
T  6891555 tttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaatgattgccgtata 6891480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 261 - 464
Target Start/End: Original strand, 51607357 - 51607557
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||| |||||||| | ||||||||||||||||||||  |||||||||||| |||||||||||||||||| |||          |||| |  |||||| |    
T  51607357 gcaggaccgtccctaaaaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtat----ttttttaaaaaaaaaatgtttt 51607452  T
Q  361 atttatattttttaaaagataaatacaaggtg-ccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaaca 459  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||| |   ||||||||||||||||||||||||||||||  ||| |||| |    
T  51607453 atttatattttttaaaagataaatataaggtggccgtatatatgcggtacacccaaacgtgaaaatgactaccgtatacatgaggaactcccatctaata 51607552  T
Q  460 ccaaa 464  Q
    |||||    
T  51607553 ccaaa 51607557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 261 - 425
Target Start/End: Original strand, 22865377 - 22865538
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||||||||||||||||| ||||||||  |||||||||||| || ||||||||||||||| |||          ||||||||||||||||    
T  22865377 gcagggccgtccctgagaattcggaggcacggctctgggaatgaaaagaggtcaatgataaaatcaaaacgtat--tttttttcaaaagagcaatgttct 22865474  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaat 425  Q
    ||||||||||||||||||||||||||||| |||  ||||||| ||||||||| |  |||||||||    
T  22865475 atttatattttttaaaagataaatacaagatgctctatatat-cggtacacccaaaggtgaaaat 22865538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 346 - 450
Target Start/End: Original strand, 38547035 - 38547139
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 445  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |   |||||||| |||| | ||||||||||||    
T  38547035 aaagatcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgtggtacacccaaatgtgaaaatcactatcatatacatgagga 38547134  T
Q  446 acctc 450  Q
    |||||    
T  38547135 acctc 38547139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 345 - 450
Target Start/End: Original strand, 39134720 - 39134826
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaa-gataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgag 443  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||||||| ||||||||||  |||||| |  ||||| ||| ||||| |||||||||||    
T  39134720 aaaagaacaatgttctatttaaattttttaaaaagataaatacaaggtgctgtatatatgcaatacacccaaaggtgataatcactactgtatacatgag 39134819  T
Q  444 gaacctc 450  Q
    |||||||    
T  39134820 gaacctc 39134826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 352 - 449
Target Start/End: Complemental strand, 33170867 - 33170770
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacct 449  Q
    ||||||| |||||| |||||||||||  ||||||||| |||  |||||||||||||||||| | |||||||||| ||||||||||||||||| |||||    
T  33170867 caatgttatatttaaattttttaaaacgtaaatacaatgtgttgtatatatgcggtacaccaaatggtgaaaatcactaccgtatacatgagaaacct 33170770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 345 - 450
Target Start/End: Complemental strand, 45758609 - 45758504
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |||||||||||||||||| |||||||  |||||||||   |||| | |  ||||||||| ||||||||||||||||||    
T  45758609 aaaagaacaatgttctatttaaattttttaaaagataaatgcaaggtgttgtatatatgttatacatccaaaggtgaaaatcactaccgtatacatgagg 45758510  T
Q  445 aacctc 450  Q
    ||||||    
T  45758509 aacctc 45758504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 278 - 464
Target Start/End: Complemental strand, 44895827 - 44895648
Alignment:
Q  278 aattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatattttttaaaa 377  Q
    |||||||||| |||| ||||  |||||||||||| | |||| |||||||||||||||          |||| | ||||| ||||||||||||||||||||    
T  44895827 aattcggaggttcggttctgggaatgaaaagaggtcggtgaaaaaatcaaaacatattttttttttaaaaaaa-caatgatctatttatattttttaaaa 44895729  T
Q  378 gataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    |||||||| |||||| ||  |      |||||||| |  ||||||||||| |||||||||||||||||||| |||||||||||||||    
T  44895728 gataaatataaggtggcgggt------ggtacacccaaaggtgaaaatgattaccgtatacatgaggaacccccacctaacaccaaa 44895648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 345 - 446
Target Start/End: Complemental strand, 5533428 - 5533326
Alignment:
Q  345 aaaagagcaatgttctatttatatttttt-aaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgag 443  Q
    |||||| |||| ||||||||| ||||||| |||||||||| |||||||||||||||||||  |||||   |  ||||||||| |||||||||||||||||    
T  5533428 aaaagaacaatattctatttaaatttttttaaaagataaacacaaggtgccgtatatatgatgtacaatcaaaggtgaaaatcactaccgtatacatgag 5533329  T
Q  444 gaa 446  Q
    |||    
T  5533328 gaa 5533326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 346 - 450
Target Start/End: Complemental strand, 26804059 - 26803958
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 445  Q
    ||||| ||||| | |||||| ||||||||||||||||||||||| || |||||||||||| |||||     ||||||||| ||||||||||||||||| |    
T  26804059 aaagaacaatgctatatttaaattttttaaaagataaatacaagatgtcgtatatatgcgatacac---aaggtgaaaatcactaccgtatacatgagaa 26803963  T
Q  446 acctc 450  Q
    |||||    
T  26803962 acctc 26803958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 34247216 - 34247154
Alignment:
Q  268 cgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaac 330  Q
    ||||| |||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||    
T  34247216 cgtccttgagaattcggaggctcggctctggaaatgaaaaaaggtcagtgataaaatcaaaac 34247154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 345 - 443
Target Start/End: Complemental strand, 38853637 - 38853539
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgag 443  Q
    |||||| || ||||||||||| |||||||||| ||||||||||||||| ||||||||||  ||| | | |  ||||||||| |||||||||||||||||    
T  38853637 aaaagaacagtgttctatttaaattttttaaatgataaatacaaggtgtcgtatatatgttgtatatccaaaggtgaaaatcactaccgtatacatgag 38853539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 450
Target Start/End: Complemental strand, 6221791 - 6221688
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 445  Q
    ||||| |||||||||||||| |||||| ||||||||||||||| |||||||||||| |||||||| | |   |||||||| | || |||||| |||||||    
T  6221791 aaagaacaatgttctatttaaattttt-aaaagataaatacaatgtgccgtatataagcggtacatcaaaatgtgaaaatcattatcgtatatatgagga 6221693  T
Q  446 acctc 450  Q
    |||||    
T  6221692 acctc 6221688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 450
Target Start/End: Original strand, 43235774 - 43235873
Alignment:
Q  353 aatgttctatttatatttttta--aaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    ||||||||||||| |||||||   ||||||||||||||| || ||||||||||  ||||||| |  ||||||||| |||| |||||||||||||||||||    
T  43235774 aatgttctatttaaatttttttttaaagataaatacaagatgtcgtatatatgatgtacacccaaaggtgaaaatcactatcgtatacatgaggaacctc 43235873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 345 - 408
Target Start/End: Original strand, 17322621 - 17322684
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggta 408  Q
    |||||| |||||||||||||||||||||| |||||||||||||| ||  |||||||||||||||    
T  17322621 aaaagaacaatgttctatttatatttttttaaagataaatacaatgtagcgtatatatgcggta 17322684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 277 - 449
Target Start/End: Complemental strand, 50146476 - 50146307
Alignment:
Q  277 gaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatattttttaaa 376  Q
    ||||||||||||||||||||| |||||||| ||| ||  ||||||||| |||| || ||         |||||| |||||||||||||| | ||||| ||    
T  50146476 gaattcggaggctcggctctgtaaatgaaacgagacccatgataaaat-aaaaaatgta--cttttttaaaagaacaatgttctatttaaactttttgaa 50146380  T
Q  377 agataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacct 449  Q
    |||||||| ||||||||||| |||||| | || ||| |  ||| ||||| | |||| ||||||||||||||||    
T  50146379 agataaatgcaaggtgccgtgtatatgtgatagacccaaaggtaaaaatcattaccctatacatgaggaacct 50146307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 353 - 435
Target Start/End: Complemental strand, 35392376 - 35392295
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgta 435  Q
    |||||| |||||| |||||||||  ||||||||||||||||||||||||||||||| | | |  ||||||||| |||||||||    
T  35392376 aatgttttatttaaattttttaag-gataaatacaaggtgccgtatatatgcggtatatccaaaggtgaaaatcactaccgta 35392295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 297
Target Start/End: Original strand, 52127460 - 52127495
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctg 297  Q
    |||| |||||||||||||||||||||||||||||||    
T  52127460 caggaccgtccctgagaattcggaggctcggctctg 52127495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 394 - 434
Target Start/End: Complemental strand, 34247106 - 34247066
Alignment:
Q  394 cgtatatatgcggtacacctagtggtgaaaatgactaccgt 434  Q
    ||||||||||||||||||| || | ||||||||||||||||    
T  34247106 cgtatatatgcggtacaccaagagatgaaaatgactaccgt 34247066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 6e-69; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 257 - 460
Target Start/End: Complemental strand, 54780973 - 54780771
Alignment:
Q  257 atacgcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatg 356  Q
    |||| |||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| |||          ||||||||||||    
T  54780973 atacacagggccgtccctgagaattcggaggcttggctctgggaatgaaaagaggccagtgataaaatcaaaacgtat-tttttttttaaaagagcaatg 54780875  T
Q  357 ttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccaccta 456  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||| |||||||    
T  54780874 ttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccaccta 54780775  T
Q  457 acac 460  Q
    ||||    
T  54780774 acac 54780771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 266 - 464
Target Start/End: Complemental strand, 47129172 - 47128977
Alignment:
Q  266 gccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattta 365  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||          |||||| ||||||||||||||    
T  47129172 gccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatgtat---tttttttaaaagaacaatgttctattta 47129076  T
Q  366 tattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||| |||||||||||||||    
T  47129075 tattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 47128977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 274 - 464
Target Start/End: Original strand, 38209520 - 38209708
Alignment:
Q  274 tgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatatttttt 373  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||  ||||          ||||||||||||||||||||||||||||    
T  38209520 tgagaatttggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaa--tataatttttttttaaagagcaatgttctatttatatttttt 38209617  T
Q  374 aaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||    
T  38209618 aaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 38209708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 34768492 - 34768691
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||| ||||||||||||||||||||||||||| ||  ||||||||||||| |||||||||||||||||||||          |||||||||||||||||    
T  34768492 cagggtcgtccctgagaattcggaggctcggctttgggaatgaaaagaggctagtgataaaatcaaaacatat---tttttttaaaagagcaatgttcta 34768588  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||||||||||||    
T  34768589 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccagaggtgaaaatgattaccgtatacatgaggaacccccacctaacacc 34768688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 32915575 - 32915375
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||   |          |||||||| ||||||||    
T  32915575 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacggtt--ttttttttaaaagagcgatgttcta 32915478  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| || ||| ||||||| |||||||||||||||||||| ||||||||||||    
T  32915477 tttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtaaaaatgattaccgtatacatgaggaacccccacctaacacc 32915378  T
Q  462 aaa 464  Q
    |||    
T  32915377 aaa 32915375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 34027768 - 34027569
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||          |||| ||||||||||||    
T  34027768 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtat---ttttttaaaaaaagcaatgttcta 34027672  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| |  ||||||||||||||| |||||||||||||||| ||||||||||||    
T  34027671 tttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactacggtatacatgaggaacccccacctaacacc 34027572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 256 - 464
Target Start/End: Complemental strand, 10979098 - 10978890
Alignment:
Q  256 tatacgcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaat 355  Q
    |||| ||||||||||| ||||||||||||||| |  ||||||  ||||||||||||  ||||||||||||||||| |||          |||||||||||    
T  10979098 tataggcagggccgtctctgagaattcggaggtttagctctgggaatgaaaagaggttagtgataaaatcaaaacgtatttttttttttaaaagagcaat 10978999  T
Q  356 gttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacct 455  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||  ||||||||||||||||||||||||||||||| ||||||    
T  10978998 gttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaagtgaaaatgactaccgtatacatgaggaacccccacct 10978899  T
Q  456 aacaccaaa 464  Q
    |||||||||    
T  10978898 aacaccaaa 10978890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 276 - 461
Target Start/End: Original strand, 43455463 - 43455645
Alignment:
Q  276 agaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatattttttaa 375  Q
    |||||||||||||||| |||||  |||||||||||| |||||||||||||||||| |||          |||||||||||||||||||||||||||||||    
T  43455463 agaattcggaggctcgactctgggaatgaaaagaggtcagtgataaaatcaaaacgtat---tatttttaaaagagcaatgttctatttatattttttaa 43455559  T
Q  376 aagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||| |||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||| ||||||||||||    
T  43455560 aagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 43455645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 261 - 464
Target Start/End: Original strand, 5128757 - 5128959
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatc-aaaacatatannnnnnnnnaaaagagcaatgttc 359  Q
    |||||||||||||||||||||  ||||||||||||||  |||||||||||||||||||||||||| ||||| | |          | |||||| || |||    
T  5128757 gcagggccgtccctgagaatttagaggctcggctctgggaatgaaaagaggccagtgataaaatctaaaacgttt--ttttttttagaagagcgatattc 5128854  T
Q  360 tatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaaca 459  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||| || |||||||||||||||||||||||||||||||||||||||||||    
T  5128855 tatttatattttttaaaagataaatacaaggtgccgtatatatgcagtgcacccagaggtgaaaatgactaccgtatacatgaggaacctccacctaaca 5128954  T
Q  460 ccaaa 464  Q
    |||||    
T  5128955 ccaaa 5128959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 261 - 464
Target Start/End: Complemental strand, 48209437 - 48209230
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaa-----atcaaaacatatannnnnnnnnaaaagagcaat 355  Q
    |||||||||||||||||||||||||||||||||||||  | ||||||||| |||||||||||     |||||||| |||          |||||||||||    
T  48209437 gcagggccgtccctgagaattcggaggctcggctctgggagtgaaaagagaccagtgataaattaaaatcaaaacgtat-tttttttttaaaagagcaat 48209339  T
Q  356 gttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacct 455  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||| |||||||||||||||||||| |||| ||||||    
T  48209338 gttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaatatgactaccgtatacatgagaaacccccacct 48209239  T
Q  456 aacaccaaa 464  Q
    |||||||||    
T  48209238 aacaccaaa 48209230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 262 - 457
Target Start/End: Original strand, 2790659 - 2790851
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||| || ||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||| |          |||||| ||||||||||    
T  2790659 cagggccgtctctaagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacattt---tttttttaaaagaacaatgttcta 2790755  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaa 457  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||| |  |||||||||||||||||||||||||||||||| ||||||||    
T  2790756 tttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaa 2790851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 261 - 464
Target Start/End: Complemental strand, 32128775 - 32128574
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||| |||||| |||||||||||||||  |||||||| ||| |||||||||||||||||| |||          ||||||||||||||||    
T  32128775 gcagggccgtccctaagaatttggaggctcggctctgggaatgaaaaaaggtcagtgataaaatcaaaacgtat--ttttttttaaaagagcaatgttct 32128678  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||| |  |||||||||||||||||||||||| || |||| |||||||||||    
T  32128677 atttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacataagaaacccccacctaacac 32128578  T
Q  461 caaa 464  Q
    ||||    
T  32128577 caaa 32128574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 266 - 464
Target Start/End: Complemental strand, 1105717 - 1105522
Alignment:
Q  266 gccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattta 365  Q
    ||||||| ||||||||| ||||||||||||||  |||||||||||| |||||||||||||||||| |||          |||||||  ||||||||||||    
T  1105717 gccgtccttgagaattcagaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtat---tttttttaaaagagtgatgttctattta 1105621  T
Q  366 tattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||| |||||||||| |||| |||||||||||||||    
T  1105620 tattttttaaaagataaatacaaggtatcgtatatatgcggtacacctagaggtgaaaatgactaccatatacatgagcaacccccacctaacaccaaa 1105522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 16845210 - 16845011
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||| || ||||||||||||||||||| |||          |||||||||||||||||    
T  16845210 cagggccgtccctaagaattcggaggctcggctctggaaatgaaaaaag-ccagtgataaaatcaaaacgtat---tttttttaaaagagcaatgttcta 16845115  T
Q  362 tttatatttttt-aaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    |||||||||||| |||||||||||| |||||| ||||||||||  ||||||| |  |||||||||||||||||||||||||||||||| |||||||||||    
T  16845114 tttatatttttttaaaagataaatataaggtgtcgtatatatgtagtacacccaacggtgaaaatgactaccgtatacatgaggaacccccacctaacac 16845015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 261 - 464
Target Start/End: Original strand, 54083159 - 54083359
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||| | ||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||          |||| | ||||| |||    
T  54083159 gcagggccgtccctaaaaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacgtat---ttttttaaaaaaaacaatgatct 54083255  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |  | | |||||||||||||||||||||||||||| | |||||||||    
T  54083256 atttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagataaaaatgactaccgtatacatgaggaacccctacctaacac 54083355  T
Q  461 caaa 464  Q
    ||||    
T  54083356 caaa 54083359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 261 - 464
Target Start/End: Complemental strand, 55255448 - 55255259
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||         |||||||||||||||     
T  55255448 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaac--ataattttttttaaaagagcaatgttcc 55255351  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    |||||||||||||||||||||||||||||||||||             |||| || |||||||||||||||||||||||||||||||| |||||||||||    
T  55255350 atttatattttttaaaagataaatacaaggtgccg------------ccacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacac 55255263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 253 - 464
Target Start/End: Original strand, 10428107 - 10428322
Alignment:
Q  253 acatatacgcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagc 352  Q
    |||||||| |||||||||||  |||||||||||||||||||||||  |||||||||||| ||||| |||||||||||  |||           ||| |||    
T  10428107 acatatacacagggccgtcctcgagaattcggaggctcggctctgggaatgaaaagaggtcagtgctaaaatcaaaatttatttttttt----aaaaagc 10428202  T
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctag--------tggtgaaaatgactaccgtatacatgagg 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||        | |||||||||||||||||||||||||||    
T  10428203 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaattgtgaaaatgactaccgtatacatgagg 10428302  T
Q  445 aacctccacctaacaccaaa 464  Q
    ||||||||||||||||||||    
T  10428303 aacctccacctaacaccaaa 10428322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 37777140 - 37777340
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||| |||||| | ||||||||||||||||||||  |||||||||||| |||||||||||||||||| |||          |||| || |||||||||    
T  37777140 cagggctgtccctaaaaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtat--tttttaaaaaaaaagtaatgttcta 37777237  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||  || ||||||||    
T  37777238 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccctcaactaacacc 37777337  T
Q  462 aaa 464  Q
    |||    
T  37777338 aaa 37777340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 37514848 - 37514649
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||| |||||||| ||   |||  ||||||||||||||||||||||||||||| |||          ||| |||| ||||||||    
T  37514848 cagggccgtccctgagaatttggaggctcagcggggaa--tgaaaagaggccagtgataaaatcaaaacgtatttttttttttaaa-gagcgatgttcta 37514752  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||| ||| | ||||||||||||    
T  37514751 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgaagaatccccacctaacacc 37514652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 19498691 - 19498494
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||| || |||||||||||||||||||||   |||||||| |||||| ||||||||||||||| |||          |||||||||||||||||    
T  19498691 cagggccgtcactaagaattcggaggctcggctctaggaatgaaaacaggccaatgataaaatcaaaacgtat---tttgtttaaaagagcaatgttcta 19498595  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||||| | |  ||||||||||||||| |||||||||||||||| ||||||||||||    
T  19498594 tttatattttttaaaagataaatataaggtgccgt--atatgcggtacagccaaaggtgaaaatgactactgtatacatgaggaacccccacctaacacc 19498497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 261 - 422
Target Start/End: Complemental strand, 17679590 - 17679432
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||||||| |||||||||||||||||||| ||||  ||||||||||| ||||||||||||||||||| |||          ||||||||||| ||||    
T  17679590 gcagggccgtctctgagaattcggaggctcggttctgggaatgaaaagagaccagtgataaaatcaaaacgtat---tttttttaaaagagcaatattct 17679494  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaa 422  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  17679493 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaa 17679432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 273 - 464
Target Start/End: Complemental strand, 35465284 - 35465097
Alignment:
Q  273 ctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatattttt 372  Q
    |||||||||||||||||||  ||||  |||||||||||| ||||||||||||||||||||||          |||||| ||||||| |||||||||||||    
T  35465284 ctgagaattcggaggctcgattctgggaatgaaaagaggtcagtgataaaatcaaaacatat---tttttttaaaagaacaatgttatatttatattttt 35465188  T
Q  373 taaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    || |||||||||| ||||||| ||||||||||||||||||||   |||||||| |||||||||||||||||||| | |||||||||||||||    
T  35465187 tacaagataaataaaaggtgc-gtatatatgcggtacacctaaaagtgaaaataactaccgtatacatgaggaatccccacctaacaccaaa 35465097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 265 - 464
Target Start/End: Original strand, 35779248 - 35779442
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    |||||||| |||||||||||||| ||| |||    ||||||||||||| ||||||||||||||||| |||           ||||||||||||||||||     
T  35779248 ggccgtccttgagaattcggaggttcgactcgaggaatgaaaagaggctagtgataaaatcaaaacgtatttttttt----aaagagcaatgttctatt- 35779342  T
Q  365 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |  ||||||||||| ||||||||||||||||||||| ||||||||| ||||    
T  35779343 atattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaaccttcacctaacatcaaa 35779442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 261 - 464
Target Start/End: Original strand, 16882312 - 16882512
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||| |||||||||||||||||||||   |||||||||| | |||||||||||||||||| |||          |||| | |||||||||    
T  16882312 gcagggccgtccctaagaattcggaggctcggctctaggaatgaaaagaagtcagtgataaaatcaaaacgtat---ttttttaaaaaaaacaatgttct 16882408  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    ||||||| ||||||||||||||||| |||||||||| ||||| ||||||||| |  ||||||||||||||||||||  ||| ||||||  ||||||||||    
T  16882409 atttatactttttaaaagataaatataaggtgccgtgtatatacggtacaccaaaaggtgaaaatgactaccgtatgtatggggaaccctcacctaacac 16882508  T
Q  461 caaa 464  Q
    ||||    
T  16882509 caaa 16882512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 355 - 464
Target Start/End: Complemental strand, 13460306 - 13460197
Alignment:
Q  355 tgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacc 454  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||  ||||||||||||||||||||||| ||||||| |||||    
T  13460306 tgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtatacccagatgtgaaaatgactaccgtatacataaggaacccccacc 13460207  T
Q  455 taacaccaaa 464  Q
    ||||||||||    
T  13460206 taacaccaaa 13460197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 40089714 - 40089506
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||| ||||||| |||||||||||||||||||||   |||||||||| | |||||||||||||||||| |||          |||| ||||||||| ||    
T  40089714 cagggtcgtccctaagaattcggaggctcggctcttggaatgaaaagaagtcagtgataaaatcaaaacgtat---tttttttaaaaaagcaatgtttta 40089618  T
Q  362 tttatattt---------tttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctcca 452  Q
    |||||||||         ||||||||||||||| |||||||||||||||||||||||| | |  |||||||||||||||||||||||||||||||| |||    
T  40089617 tttatatttatttatatttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaaccccca 40089518  T
Q  453 cctaacaccaaa 464  Q
    ||||||||||||    
T  40089517 cctaacaccaaa 40089506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 265 - 426
Target Start/End: Complemental strand, 51964897 - 51964736
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    |||| ||| ||| ||||||||| ||||||||||  ||||||||||||||  ||||||||||||||| |||          ||||||||||||||||||||    
T  51964897 ggccatccttgaaaattcggagactcggctctgggaatgaaaagaggccgatgataaaatcaaaacgtat---tttttttaaaagagcaatgttctattt 51964801  T
Q  365 atatttttt---aaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatg 426  Q
    |||||||||   |||||||||||||||||||||||||||||||| |||||| || ||||||||||    
T  51964800 atattttttttaaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatg 51964736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 262 - 404
Target Start/End: Original strand, 16922245 - 16922386
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||| ||||||||| || ||  ||||||||||| ||||||||||||||||||| | |          |||||||||||||||||    
T  16922245 cagggccgtccctgagaatttggaggctcgactttgggaatgaaaagagaccagtgataaaatcaaaacgttt-tttatttttaaaagagcaatgttcta 16922343  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgc 404  Q
    |||||||||||||||||||||||| || ||| |||||||||||    
T  16922344 tttatattttttaaaagataaatataaagtgtcgtatatatgc 16922386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 345 - 412
Target Start/End: Original strand, 51691913 - 51691980
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 412  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  51691913 aaaagagcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 51691980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 464
Target Start/End: Original strand, 38352189 - 38352372
Alignment:
Q  268 cgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttata 367  Q
    ||||||| ||||||||||||||||||||||  |||||||||||  |||||||||||||||||| |||           ||| || |||| ||||||||||    
T  38352189 cgtccctaagaattcggaggctcggctctgggaatgaaaagagatcagtgataaaatcaaaacgtat---ttttttttaaaaagtaatgatctatttata 38352285  T
Q  368 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    |||||||||||||||||| ||||||          |||||||||| |  |||||||||||||||||| ||||||||||||| |||||||||||||||    
T  38352286 ttttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtgtacatgaggaacccccacctaacaccaaa 38352372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 277 - 450
Target Start/End: Complemental strand, 52468459 - 52468290
Alignment:
Q  277 gaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatattttttaaa 376  Q
    ||||||||||||||||||||| |  |||||||||| | || ||||||| ||||| |||          |||||| |||||||||||||| ||||||||||    
T  52468459 gaattcggaggctcggctctgtaggtgaaaagaggtctgtaataaaataaaaacgtat----ttttttaaaagaacaatgttctatttaaattttttaaa 52468364  T
Q  377 agataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    |||||||||||||||||||||||||||   |||| | |  ||||||||| |||||||||| |||||||||||||    
T  52468363 agataaatacaaggtgccgtatatatgttatacatccaaaggtgaaaatcactaccgtatgcatgaggaacctc 52468290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 366 - 450
Target Start/End: Original strand, 4167910 - 4167994
Alignment:
Q  366 tattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |  ||||||||| |||||| |||||||||||||||||    
T  4167910 tattttttaaaagataaatacaaggtgccgtatatatgcgatacacccaaaggtgaaaatcactaccttatacatgaggaacctc 4167994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 262 - 410
Target Start/End: Original strand, 9578575 - 9578728
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaa-----atcaaaacatatannnnnnnnnaaaagagcaatg 356  Q
    ||||||||||| |||||||||||||||||| |||||  | ||||||||||| |||||||||     |||||||| |||          ||||||||||||    
T  9578575 cagggccgtccttgagaattcggaggctcgactctgggagtgaaaagaggcaagtgataaattaaaatcaaaacgtat-ttcttttttaaaagagcaatg 9578673  T
Q  357 ttctatttatattttttaaaagataaatacaaggt-gccgtatatatgcggtaca 410  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  9578674 ttctatttatattttttaaaagataaatacaaggtagccatatatatgcggtaca 9578728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 352 - 450
Target Start/End: Complemental strand, 27112132 - 27112034
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| |   |||||||| ||||||||||||||||||||||||    
T  27112132 caatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctc 27112034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 450
Target Start/End: Original strand, 10041998 - 10042103
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |||||| |||| |||||||||||||||||||| |||| | ||||||||   |||||||| ||||||||||||| ||||    
T  10041998 aaaagaacaatgttctatttaaatttttaaaaaaataaatacaaggtgccgtatgtatgtgatacacctaaatgtgaaaatcactaccgtatacaggagg 10042097  T
Q  445 aacctc 450  Q
    ||||||    
T  10042098 aacctc 10042103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 395 - 464
Target Start/End: Original strand, 23509846 - 23509915
Alignment:
Q  395 gtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||    
T  23509846 gtatatatgcggtacacctagaggtgaaaatgactaccgtagacatgaggaacccccacctaacaccaaa 23509915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 345 - 464
Target Start/End: Complemental strand, 24969536 - 24969427
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||| ||||||| |||||||||||||||||||||||||||| ||||||          |||||||||| |  ||||||||||||||||||||||||||||    
T  24969536 aaaaaagcaatgatctatttatattttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtatacatgagg 24969447  T
Q  445 aacctccacctaacaccaaa 464  Q
    |||| |||||||||||||||    
T  24969446 aacccccacctaacaccaaa 24969427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 352 - 450
Target Start/End: Original strand, 36118463 - 36118561
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||| | |||||| |    ||||||| ||||||||||||||||| ||||||    
T  36118463 caatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacacccaaatatgaaaatcactaccgtatacatgagtaacctc 36118561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 262 - 400
Target Start/End: Original strand, 23508427 - 23508564
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||| |||||| ||| ||||||||||||||||| ||  |||||||||||||||||||||||||||||  || ||          || |||||||||||||    
T  23508427 caggaccgtccatgaaaattcggaggctcggctttgggaatgaaaagaggccagtgataaaatcaaa--atgtattttttttttaatgagcaatgttcta 23508524  T
Q  362 tttat-attttttaaaagataaatacaaggtgccgtatat 400  Q
    ||||| |||||||||||||||||||||||||| |||||||    
T  23508525 tttataattttttaaaagataaatacaaggtgtcgtatat 23508564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 352 - 442
Target Start/End: Complemental strand, 36178774 - 36178684
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatga 442  Q
    |||||||||||||| ||| |||||||||||||||||||||| |||||||||||| |||||| |   |||||||| |||||| |||||||||    
T  36178774 caatgttctatttaaattatttaaaagataaatacaaggtgtcgtatatatgcgatacacccaaatgtgaaaatcactaccttatacatga 36178684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 450
Target Start/End: Complemental strand, 24397043 - 24396938
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| |||| || |||||| ||||||||||||||||||| ||||||| ||||||||| | |||||  |  ||||||||| |||| |||||||||||||    
T  24397043 aaaagaacaatattttatttaaattttttaaaagataaatataaggtgcagtatatatgtgatacactcaaaggtgaaaatcactatcgtatacatgagg 24396944  T
Q  445 aacctc 450  Q
    ||||||    
T  24396943 aacctc 24396938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 345 - 425
Target Start/End: Original strand, 39655252 - 39655332
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaat 425  Q
    |||||| |||||||||||||| |||||||||||||||||||||| || ||| |||||||||||||||| |  |||||||||    
T  39655252 aaaagaacaatgttctatttaaattttttaaaagataaatacaaagttccgcatatatgcggtacacccaaaggtgaaaat 39655332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 352 - 450
Target Start/End: Original strand, 2135326 - 2135424
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    |||| ||||||||| |||||||||||||||||||||||||| |||||||||||| |||| | |  ||| || || |||| |||||| ||||||||||||    
T  2135326 caatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacatccaaaggtaaacatcactatcgtatatatgaggaacctc 2135424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 354 - 450
Target Start/End: Original strand, 37744916 - 37745013
Alignment:
Q  354 atgttctatttatatttt-ttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    |||||||||||| ||||| |||||||||||||| |||||| || ||||||||| |||| | |  ||||||||| |||||||||||| |||||||||||    
T  37744916 atgttctatttaaatttttttaaaagataaatataaggtgtcgcatatatgcgatacatccaaaggtgaaaatcactaccgtatacttgaggaacctc 37745013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 24969786 - 24969718
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaac 330  Q
    ||||||||||||| |||||||||||||||| |||||  ||||||||||||| |||||||||| ||||||    
T  24969786 cagggccgtccctaagaattcggaggctcgactctgggaatgaaaagaggctagtgataaaaacaaaac 24969718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 277 - 447
Target Start/End: Original strand, 39329325 - 39329492
Alignment:
Q  277 gaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatattttttaaa 376  Q
    ||||| |||||||||| |||| || |||||||||| | || ||||||| |||||||||          |||||| ||||||||| |||| ||||||||||    
T  39329325 gaatttggaggctcggttctgtaagtgaaaagaggtccgtaataaaataaaaacatat---tttttttaaaagaacaatgttctctttaaattttttaaa 39329421  T
Q  377 agataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaac 447  Q
    ||||||||||||||||  ||||||||| | |||||| |  | |||||||   ||||||||||| |||||||    
T  39329422 agataaatacaaggtgttgtatatatgtgatacacccaaagatgaaaatccataccgtatacaggaggaac 39329492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 450
Target Start/End: Original strand, 36362869 - 36362973
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| ||||| ||| |||| |||||||||||||||||||||| |||||||||||||||  |||||| |   ||| |||| |||||| ||||||| |||    
T  36362869 aaaagaacaatgctctgtttaaattttttaaaagataaatacaaagtgccgtatatatgcaatacacccaaatgtggaaatcactaccatatacat-agg 36362967  T
Q  445 aacctc 450  Q
    ||||||    
T  36362968 aacctc 36362973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 278 - 334
Target Start/End: Original strand, 2975358 - 2975414
Alignment:
Q  278 aattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatat 334  Q
    |||||| | ||||||||||||||||||||||||| || |||||||||||||||||||    
T  2975358 aattcgaatgctcggctctgaaaatgaaaagaggtcaatgataaaatcaaaacatat 2975414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 389
Target Start/End: Complemental strand, 24614061 - 24614018
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaag 389  Q
    ||||| |||||||||||||| |||||||||||||||||||||||    
T  24614061 aaagaacaatgttctatttaaattttttaaaagataaatacaag 24614018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 359 - 410
Target Start/End: Complemental strand, 40217327 - 40217276
Alignment:
Q  359 ctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtaca 410  Q
    ||||||| ||||||||||||||||||| |||||| |||||||||||| ||||    
T  40217327 ctatttaaattttttaaaagataaatataaggtgtcgtatatatgcgataca 40217276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 410
Target Start/End: Original strand, 29425187 - 29425237
Alignment:
Q  360 tatttatattttttaaaagataaatacaaggtgccgtatatatgcggtaca 410  Q
    |||||| ||||||||||| ||||||| |||||||||||||||||| |||||    
T  29425187 tatttaaattttttaaaaaataaatataaggtgccgtatatatgcagtaca 29425237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 387
Target Start/End: Original strand, 30507120 - 30507162
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaataca 387  Q
    |||||| |||||||||||||| |||||||||||||||||||||    
T  30507120 aaaagaacaatgttctatttaaattttttaaaagataaataca 30507162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 450
Target Start/End: Complemental strand, 45656277 - 45656179
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    ||||||| |||||| |||||||||||||||||| ||||||| | |||||||||| || | | |   |||||||| || | ||||||||||| |||||||    
T  45656277 caatgttttatttaaattttttaaaagataaatgcaaggtgtcatatatatgcgataaatccaaatgtgaaaatcacgaacgtatacatgacgaacctc 45656179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 297
Target Start/End: Complemental strand, 980395 - 980360
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctg 297  Q
    |||| |||||||||||||||||||||||||||||||    
T  980395 caggaccgtccctgagaattcggaggctcggctctg 980360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 13460360 - 13460305
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtg 317  Q
    ||||||||||| |||||||||||||||||| |||||  ||| |||||||| |||||    
T  13460360 cagggccgtccttgagaattcggaggctcgactctgggaataaaaagaggtcagtg 13460305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 402
Target Start/End: Complemental strand, 15735189 - 15735142
Alignment:
Q  355 tgttctatttatattttttaaaagataaatacaaggtgccgtatatat 402  Q
    ||||||||||| |||||||||||||||||||||||  | |||||||||    
T  15735189 tgttctatttaaattttttaaaagataaatacaagacgtcgtatatat 15735142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 410
Target Start/End: Original strand, 11906904 - 11906954
Alignment:
Q  360 tatttatattttttaaaagataaatacaaggtgccgtatatatgcggtaca 410  Q
    |||||| ||||||  ||||||||||||||||| ||||||||||| ||||||    
T  11906904 tatttaaatttttataaagataaatacaaggtaccgtatatatgtggtaca 11906954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 261 - 464
Target Start/End: Complemental strand, 1528 - 1328
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| |||          ||||||||| ||||||    
T  1528 gcagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtat---tttttttaaaagagcactgttct 1432  T
Q  361 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacac 460  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| || | |||||||||||||||||||||||||||||| |||||||||||    
T  1431 atttatattttttaaaagataaatacaagctgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacac 1332  T
Q  461 caaa 464  Q
    ||||    
T  1331 caaa 1328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 106723 - 106523
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| |||||| |||||||||||||||  ||||||||||||||||||||||||||||||| |||          |||||| ||||||||||    
T  106723 cagggccgtccctaagaatttggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtat--ttttttttaaaagaacaatgttcta 106626  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacacc 461  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| |  |||||||||||||||||||||||||||||||| ||||||||||||    
T  106625 tttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 106526  T
Q  462 aaa 464  Q
    |||    
T  106525 aaa 106523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 353 - 450
Target Start/End: Original strand, 206496 - 206593
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    ||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||    
T  206496 aatgttctatttaaattttgtaaaagataaatacaaggtgtcgtatatatgcggtacacccaatggtgaaaatcactaccgtatacatgaggaacctc 206593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 345 - 450
Target Start/End: Original strand, 257 - 362
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |   |||||||| |||||||||||||||| |    
T  257 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaatgtgaaaatcactaccgtatacatgatg 356  T
Q  445 aacctc 450  Q
    ||||||    
T  357 aacctc 362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 352 - 450
Target Start/End: Original strand, 173516 - 173614
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||| |  ||| ||||| |||||||||||| |||||||||||    
T  173516 caatgttctatttaaattttttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaggtaaaaatcactaccgtatacgtgaggaacctc 173614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 262 - 403
Target Start/End: Complemental strand, 183244 - 183106
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||||| ||||| ||||||||||||||  ||||||||||||||||||||||||| ||||| |||          |||||||  ||||||||    
T  183244 cagggccgtccctgaaaattcagaggctcggctctgggaatgaaaagaggccagtgataaaattaaaacgtat---tttttttaaaagagagatgttcta 183148  T
Q  362 tttatattttttaaaagataaatacaaggtgccgtatatatg 403  Q
    ||||||||||||||||||||||||||| ||  ||||||||||    
T  183147 tttatattttttaaaagataaatacaaagtatcgtatatatg 183106  T

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Target: scaffold0001; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 399 - 464
Target Start/End: Complemental strand, 181969 - 181904
Alignment:
Q  399 atatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 464  Q
    |||||||||||| | || |||||||||||||||||||||||||||||||| ||| |||||||||||    
T  181969 atatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaacccccatctaacaccaaa 181904  T

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Target: scaffold0097 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 352 - 450
Target Start/End: Complemental strand, 39022 - 38924
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||  |   |||||||| ||||||||||| ||||||||||||    
T  39022 caatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacacacaaatgtgaaaatcactaccgtatatatgaggaacctc 38924  T

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Target: scaffold0182 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 346 - 446
Target Start/End: Original strand, 23993 - 24093
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagga 445  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |   |||||||| | |||||||| ||| ||||    
T  23993 aaagaacaatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatcattaccgtatgcataagga 24092  T
Q  446 a 446  Q
    |    
T  24093 a 24093  T

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Target: scaffold1320 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 353 - 450
Target Start/End: Complemental strand, 1450 - 1353
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    ||||||||||||| | ||||||||||||||||| ||||||| ||||||||||  |||||| |   |||||||| |||| |||||||||||||||||||    
T  1450 aatgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 1353  T

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Target: scaffold0007 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 345 - 447
Target Start/End: Original strand, 230858 - 230960
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |||| |||||||||||||  ||||||  ||||||||||| || ||| |  ||||||||| |||||| |||||||||||    
T  230858 aaaagaacaatgttctatttaaatttgttaaaagataaatttaaggtgttgtatatatgcgatatacccaaaggtgaaaatcactaccttatacatgagg 230957  T
Q  445 aac 447  Q
    |||    
T  230958 aac 230960  T

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Target: scaffold0022 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 450
Target Start/End: Complemental strand, 40191 - 40084
Alignment:
Q  345 aaaagagcaatgttctattta--tattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatga 442  Q
    |||||| ||||||||||||||  | ||||||||||||||||||||||||||||||| ||||  |||||||    ||||||||| || | |||||||||||    
T  40191 aaaagaacaatgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatga 40092  T
Q  443 ggaacctc 450  Q
    | ||||||    
T  40091 gcaacctc 40084  T

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Target: scaffold0022; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 450
Target Start/End: Complemental strand, 138251 - 138144
Alignment:
Q  345 aaaagagcaatgttctattta--tattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatga 442  Q
    |||||| ||||||||||||||  | ||||||||||||||||||||||||||||||| ||||  |||||||    ||||||||| || | |||||||||||    
T  138251 aaaagaacaatgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatga 138152  T
Q  443 ggaacctc 450  Q
    | ||||||    
T  138151 gcaacctc 138144  T

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Target: scaffold0227 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 391
Target Start/End: Complemental strand, 16168 - 16123
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggt 391  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||    
T  16168 aaagagaaatgttctatttaaattttttaaaagataaatacaaggt 16123  T

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Target: scaffold0227; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 450
Target Start/End: Complemental strand, 16095 - 16026
Alignment:
Q  381 aaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    ||||||||| || ||||| ||||||||||| | |  | ||||||| ||||||||||||||||| ||||||    
T  16095 aaatacaagatgtcgtatgtatgcggtacatccaaagatgaaaatcactaccgtatacatgagaaacctc 16026  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 351360 - 351438
Alignment:
Q  372 ttaaaagataaatacaaggtgccgtatatatgcggtacacctagtggtgaaaatgactaccgtatacatgaggaacctc 450  Q
    ||||||||||||||||||||| ||||||||||  ||||||| |  |||||||||  |||| | ||||| |||| |||||    
T  351360 ttaaaagataaatacaaggtgtcgtatatatgttgtacacccaaaggtgaaaatcgctactgaatacacgaggtacctc 351438  T

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