View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7450_high_4 (Length: 345)
Name: NF7450_high_4
Description: NF7450
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7450_high_4 |
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Alignment Details
Target: chr8 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 8 - 331
Target Start/End: Original strand, 33711110 - 33711433
Alignment:
| Q |
8 |
caattcaactgaaaattatattttttaaactcaaacctaatgatcaaactatgagaaaccattaagtctaaagcctttgcatgttacaagacttcttggg |
107 |
Q |
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| T |
33711110 |
caattcaactgaaaattatattttttaaactcaaacctaatgatcaaactatgagaaaccattaagtctaaagcctttgcatgttgcaagacttcttgga |
33711209 |
T |
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| Q |
108 |
tgaaaattccttggtttgtgacaatctctgaaacctccactggtaccttgcattgccaactgataaattgttgcctcataaaagtgtgtgattttctttt |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33711210 |
tgaaaattccttggtttgtgacaatctctgaaacctccacttgtaccttgcattgccaactgataaattgttgcctcataaaagtgtgtgattttctttt |
33711309 |
T |
|
| Q |
208 |
gttggggattgaattagattcttgattaaaatttcaatcatcatcaagaatcagaaaaagataaaataaatcaagtttgctaattccatattaannnnnn |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33711310 |
gttggggattgaattagattcttgattaaaatttcaatcatcatcaagaatcagaaaaagataaaataaatcaagtttgctaattccatattaatttttt |
33711409 |
T |
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| Q |
308 |
nnataaaactcataacaaactttt |
331 |
Q |
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|||||||||||||||||||||| |
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| T |
33711410 |
ttataaaactcataacaaactttt |
33711433 |
T |
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