View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7450_high_7 (Length: 242)
Name: NF7450_high_7
Description: NF7450
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7450_high_7 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 27 - 146
Target Start/End: Complemental strand, 25106486 - 25106366
Alignment:
| Q |
27 |
gcacttggaaaa-aagttagcataatcttttgnnnnnnnatttggtggattataacttataagaacggacaaaaataattgcaccatgagggggtttgag |
125 |
Q |
| |
|
|||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25106486 |
gcacttggaatataagttagcataatcttttgtttttttatttggtggattataacttataagaacggacaaaaataattgcaccatgagggggtttgag |
25106387 |
T |
|
| Q |
126 |
tgtaaacctagagctcttcct |
146 |
Q |
| |
|
|||||||||| |||||||||| |
|
|
| T |
25106386 |
tgtaaacctaaagctcttcct |
25106366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University