View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7450_high_8 (Length: 237)

Name: NF7450_high_8
Description: NF7450
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7450_high_8
NF7450_high_8
[»] chr8 (1 HSPs)
chr8 (154-226)||(30997864-30997936)


Alignment Details
Target: chr8 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 30997936 - 30997864
Alignment:
154 ttgtcctaccttggttttgttctttcagaacaacacaacatgaataaagtttggcttcttgtactaatgatgt 226  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
30997936 ttgtcctacctttgttctgttcttgcagaacaacacaacatgaataaagtttggcttcttgtactaatgatgt 30997864  T

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