View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7450_low_3 (Length: 548)
Name: NF7450_low_3
Description: NF7450
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7450_low_3 |
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Alignment Details
Target: chr2 (Bit Score: 473; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 473; E-Value: 0
Query Start/End: Original strand, 20 - 532
Target Start/End: Original strand, 10760284 - 10760796
Alignment:
| Q |
20 |
ccaccccttctacctccctcgatttcacatcccaattgcagctttgaaatggccaactccagtgccaccccaaatcacaattcgggaaacagttatgctt |
119 |
Q |
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| T |
10760284 |
ccaccccttctacctccctcgatttcacatcccaattgcagctttgaaatggccaactccagtgccaccccaaatcacaattcgggaaacagttttgctt |
10760383 |
T |
|
| Q |
120 |
cctgatcatgttttaatgttcttaaactaccctttatcttttcgctatcacaccaaacatgaccttcaatgtgtttactcttcagatgatgactcaaaac |
219 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |
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| T |
10760384 |
cctgatcatgttttaattttcttaaactaccctttatcttttcgctatcacaccaaacgtgaccttcaatgtgtttactcttcagatcatgactcaaaac |
10760483 |
T |
|
| Q |
220 |
ctcgtctcactcaagaaccggttcaactttactcgattaggcttcacgaacaaattgtacgttgtccaatccctccacgtggcgataatatatcacttat |
319 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
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| T |
10760484 |
ctcgtctcactcaagaaccggttcaactttactcgattaggcttcacgaacaaattgtacgttgtccaatccctccacgtggtgagaatatatcacttat |
10760583 |
T |
|
| Q |
320 |
gataaaatccaacggtcccattaaaataaaaaagtcgtcaatccataattgggaaccactagtctacgaagctctcttcgatcacgacaacaccaccatc |
419 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
10760584 |
gataaaatccaacggtcccattcaaataaaaaagtcgtcaatccataattgggaaccactagtctacgaagctctcttcgatcgcgacaacaccaccatc |
10760683 |
T |
|
| Q |
420 |
gtatttgtgaaaggccttaatctaagaccagagaaattaggtgaaccctctagattccaatgtgtatatggttgggatttcacgaagcccaatttcttat |
519 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
10760684 |
gtatttgtgaaaggccttaatctacgaccagagaaattaggtgaaccctctagattccaatgtgtatatggttgggatttcacgaagccgaatttcttat |
10760783 |
T |
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| Q |
520 |
ttaaatctgatgt |
532 |
Q |
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||||||||||||| |
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| T |
10760784 |
ttaaatctgatgt |
10760796 |
T |
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