View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7451_low_6 (Length: 278)
Name: NF7451_low_6
Description: NF7451
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7451_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 141; Significance: 5e-74; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 10 - 166
Target Start/End: Original strand, 13297979 - 13298135
Alignment:
| Q |
10 |
gaacctgtggacacaaacattatctcaccaccctcttaccaaggaattttggaaccatttccacctcatcatcagttccctacaatctctgatcaatcag |
109 |
Q |
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| T |
13297979 |
gaacctatggacacaaatattatatcaccaccctcttaccaaggaattttggaaccatttccacctcatcatcagttccctacaatctctgatcaatcag |
13298078 |
T |
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| Q |
110 |
gttgttctaactactggagcatggaagatctcttgtcactgcaactactaaatggtg |
166 |
Q |
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| T |
13298079 |
gttgttctaactactggagcatggaagatctcttgtcacttcaactactaaatggtg |
13298135 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 262
Target Start/End: Original strand, 13298186 - 13298227
Alignment:
| Q |
221 |
acctaagtgcttaattaatttccatgaagcagaagtttatat |
262 |
Q |
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| T |
13298186 |
acctaagtgcttaattaattttcatgaagcagaagtttatat |
13298227 |
T |
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