View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7452_low_8 (Length: 240)
Name: NF7452_low_8
Description: NF7452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7452_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 17 - 229
Target Start/End: Original strand, 31328403 - 31328615
Alignment:
| Q |
17 |
cgccgaaccagttgagttacttctatacaaaggaggtaaagaaaaactcaaattcttctttgtatcacaattgagacttttgcttctactaaatccccaa |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31328403 |
cgccgaaccagttgagttacttctatacaaaggaggtaaagaaaaactcaaattcttctttgtatcacaattgagacttttgcttctactaaatccccaa |
31328502 |
T |
|
| Q |
117 |
aaagacttggaatgatgtttcttctcattattagtactcacatttaaaagctctcgaacggtttctgttccggactgagccaagatccaccttggattac |
216 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31328503 |
aaagacttggaatgatgttttttctcattattagtactcacatttaaaagctctcgaacggtttctgttccggactgagccaagatccaccttggattac |
31328602 |
T |
|
| Q |
217 |
tttctttcttcat |
229 |
Q |
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||||||||||||| |
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| T |
31328603 |
tttctttcttcat |
31328615 |
T |
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