View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7453_high_1 (Length: 454)
Name: NF7453_high_1
Description: NF7453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7453_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 404; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 404; E-Value: 0
Query Start/End: Original strand, 18 - 441
Target Start/End: Original strand, 36835572 - 36835995
Alignment:
| Q |
18 |
aatttctgcttttattgtaaacttccttctcattttacattgagatactagcttccctggcatgctccttgcattgtgagtttttactaccaaccaacat |
117 |
Q |
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| T |
36835572 |
aatttctgcttttattgtaaacttctttctcattttacattgagatactagcttccctggcatgctccttgcattgtgagtttttactaccaaccaacat |
36835671 |
T |
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| Q |
118 |
ctccctaagttgctgaaaacacaaccttaattactcataatcatgttcaaacattaacaacataactgttttacttaaatttcattgttaatgaatattc |
217 |
Q |
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| T |
36835672 |
ctccctaagttgctgaaaacacaaccttaatcactcataatcatgttcaaacattaacaacataactgttttactaaagtttcattgttaatgaatattc |
36835771 |
T |
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| Q |
218 |
taacactctaatcaataaacatgttactacagaaaattcaaagttaagataaggagttaccaggaggtggagaaagcagtccctgccattgtgagaatgt |
317 |
Q |
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| T |
36835772 |
taacactctaatcaataaacatgttactatagaaaattcaaagttaagataaggagttaccaggaggtggagaaagcagtccctgccattgtgagaatgt |
36835871 |
T |
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| Q |
318 |
gtgtttgtcattcttatctctgtgaatttggctttcaaaagcttaacacactttagccaaatcttgcatttagtgggccatgaaatttgagatcagcaat |
417 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36835872 |
gtgtttgtcattcttatctctgtgaatttggctttcaaaagcttaacacactttagccaaatcttgcatttagtgggccatgaaatttgagatcagcaat |
36835971 |
T |
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| Q |
418 |
ggatttatgccacgtggcaaatat |
441 |
Q |
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| T |
36835972 |
ggatttatgccacgtggcaaatat |
36835995 |
T |
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