View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7456_low_12 (Length: 240)
Name: NF7456_low_12
Description: NF7456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7456_low_12 |
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Alignment Details
Target: chr1 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 44685131 - 44685285
Alignment:
| Q |
1 |
caacattttcacgtctctcttcttctattgacagcttggcattgttaacattaaccatcggaaacaactctgaatcagaattgaaagccattgtcatggt |
100 |
Q |
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| T |
44685131 |
caacattttcacgtctctcttcttctattgacagcttggcattgttaacattaaccatcggaaacaactctgaatcagaattgaaagccattgccatggt |
44685230 |
T |
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| Q |
101 |
gctttctcctaggttttccattaattattatatacttgtaattttgcagttaatta |
156 |
Q |
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| T |
44685231 |
gctttctcctaggttttcca-taattattatatacttgtaattttgtagttaatta |
44685285 |
T |
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