View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7456_low_6 (Length: 347)

Name: NF7456_low_6
Description: NF7456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7456_low_6
NF7456_low_6
[»] chr3 (18 HSPs)
chr3 (16-331)||(12217249-12217564)
chr3 (16-331)||(7428113-7428431)
chr3 (77-161)||(2501455-2501539)
chr3 (68-146)||(7325091-7325169)
chr3 (57-132)||(772233-772308)
chr3 (65-132)||(2455123-2455190)
chr3 (68-126)||(7443708-7443766)
chr3 (38-163)||(37758418-37758543)
chr3 (77-161)||(9566501-9566585)
chr3 (48-161)||(2491354-2491467)
chr3 (48-161)||(7334950-7335063)
chr3 (77-161)||(755311-755395)
chr3 (95-155)||(759390-759450)
chr3 (80-155)||(23231708-23231783)
chr3 (77-146)||(2474413-2474482)
chr3 (48-161)||(2659821-2659934)
chr3 (20-161)||(9562642-9562783)
chr3 (75-159)||(7398853-7398937)
[»] chr6 (1 HSPs)
chr6 (20-158)||(24418152-24418290)
[»] chr7 (1 HSPs)
chr7 (65-158)||(27754913-27755006)
[»] chr2 (1 HSPs)
chr2 (20-155)||(33037377-33037512)
[»] scaffold1004 (1 HSPs)
scaffold1004 (20-122)||(1376-1478)
[»] scaffold0097 (1 HSPs)
scaffold0097 (57-163)||(33937-34043)
[»] chr5 (2 HSPs)
chr5 (29-156)||(20305085-20305212)
chr5 (29-156)||(20309489-20309616)
[»] scaffold0760 (1 HSPs)
scaffold0760 (20-122)||(3870-3972)


Alignment Details
Target: chr3 (Bit Score: 312; Significance: 1e-176; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 16 - 331
Target Start/End: Original strand, 12217249 - 12217564
Alignment:
Q  16 cacgcttccgtttgatcttgttgcagaaattttgtgtagaattccggtaaagttactcattcagcttcgctgcctctgtaagtccttcaattctttaatc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12217249 cacgcttccgtttgatcttgttgcagaaattttgtgtagaattccggtaaagttactcattcagcttcgctgcctctgtaagtccttcaattctttaatc 12217348  T
Q  116 tctgatcccaaatttgcagagaaacatcttcgcttgtcaaccaagcactgccatcttatgttatgctcctggaacaaccaacataagttttttatgtatg 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12217349 tctgatcccaaatttgcagagaaacatcttcgcttgtcaaccaagcaccgccatcttatgttatgctcctggaacaaccaacataagttttttatgtatg 12217448  T
Q  216 atttccctatccattctgttttctcaaattctagtgtcacgcagacacaactcacttaccctatcagtctcaaaagtacatatggcgcacctttagcggt 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12217449 atttccctatccattctgttttctcaaattctagtgtcacgcagacacaactcacttaccctatcagtctcaaaagtacatatggcgcacctttagcggt 12217548  T
Q  316 gtgctcttgtgccggc 331  Q
    ||||||||||||||||    
T  12217549 gtgctcttgtgccggc 12217564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 16 - 331
Target Start/End: Complemental strand, 7428431 - 7428113
Alignment:
Q  16 cacgcttccgtttgatcttgttgcagaaattttgtgtagaattccggtaaagttactcattcagcttcgctgcctctgtaagtccttcaattctttaatc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7428431 cacgcttccgtttgatcttgttgcagaaattttgtgtagaattccggtaaagttactcattcagcttcgctgcctctgtaagtgcttcaattctttaatc 7428332  T
Q  116 tctgatcccaaatttgcagagaaacatcttcgcttgtcaaccaagcactgccatcttatgttatgctcctggaacaacc---aacataagttttttatgt 212  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||   |  ||||||||||| |||    
T  7428331 tctgatcccaaatttgcagagaagcatcttcgcttgtcaaccaagcaccgccatctcatgttatgctcctggaacaacccatattataagttttttgtgt 7428232  T
Q  213 atgatttccctatccattctgttttctcaaattctagtgtcacgcagacacaactcacttaccctatcagtctcaaaagtacatatggcgcacctttagc 312  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7428231 atgatttccctatccattctgttttctcaacttctagtgtcacgcagacacaactcacttaccctatcagtctcaaaagtacatatggtgcacctttagc 7428132  T
Q  313 ggtgtgctcttgtgccggc 331  Q
    |||||||||||| ||||||    
T  7428131 ggtgtgctcttgcgccggc 7428113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 2501455 - 2501539
Alignment:
Q  77 cagcttcgctgcctctgtaagtccttcaattctttaatctctgatcccaaatttgcagagaaacatcttcgcttgtcaaccaagc 161  Q
    |||||||| ||||| ||||||| ||||||||||||||| |||||||| ||||| ||| |||||||||||||  ||||||||||||    
T  2501455 cagcttcgatgcctttgtaagttcttcaattctttaatttctgatcctaaattcgcaaagaaacatcttcgtatgtcaaccaagc 2501539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 7325169 - 7325091
Alignment:
Q  68 ttactcattcagcttcgctgcctctgtaagtccttcaattctttaatctctgatcccaaatttgcagagaaacatcttc 146  Q
    |||||||| |||||||| ||||||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||||||    
T  7325169 ttactcatacagcttcggtgcctctgtaagttcttcaattctttaatttctgatcccactttcgcaaagaaacatcttc 7325091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 57 - 132
Target Start/End: Complemental strand, 772308 - 772233
Alignment:
Q  57 ttccggtaaagttactcattcagcttcgctgcctctgtaagtccttcaattctttaatctctgatcccaaatttgc 132  Q
    |||| |||||||||||| | ||||||||||||||||| |||||||| ||| || |||| |||||||||||||||||    
T  772308 ttcctgtaaagttactcgtgcagcttcgctgcctctgcaagtcctttaatactctaatatctgatcccaaatttgc 772233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 2455123 - 2455190
Alignment:
Q  65 aagttactcattcagcttcgctgcctctgtaagtccttcaattctttaatctctgatcccaaatttgc 132  Q
    ||||||||| | ||||||||||||||||| |||||||| |||||| | || |||||||||||||||||    
T  2455123 aagttactcgtgcagcttcgctgcctctgcaagtcctttaattctcttatatctgatcccaaatttgc 2455190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 7443766 - 7443708
Alignment:
Q  68 ttactcattcagcttcgctgcctctgtaagtccttcaattctttaatctctgatcccaa 126  Q
    |||||||| || ||||| ||||||||||||| ||||||||||||||| |||||||||||    
T  7443766 ttactcatacaacttcggtgcctctgtaagttcttcaattctttaatttctgatcccaa 7443708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 163
Target Start/End: Complemental strand, 37758543 - 37758418
Alignment:
Q  38 gcagaaattttgtgtagaattccggtaaagttactcattcagcttcgctgcctctgtaagtccttcaattctttaatctctgatcccaaatttgcagaga 137  Q
    ||||||||| | |||||  |||| || ||||||||| | || || || |||||||| |||||||| |||||||||||||  ||||||||||| ||  |||    
T  37758543 gcagaaattctatgtaggcttcctgtcaagttactcttacaactccgatgcctctgcaagtccttgaattctttaatcttggatcccaaattcgctaaga 37758444  T
Q  138 aacatcttcgcttgtcaaccaagcac 163  Q
    | ||||||||  ||||||||| ||||    
T  37758443 agcatcttcgtatgtcaaccacgcac 37758418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 9566585 - 9566501
Alignment:
Q  77 cagcttcgctgcctctgtaagtccttcaattctttaatctctgatcccaaatttgcagagaaacatcttcgcttgtcaaccaagc 161  Q
    |||||||| |||||||| ||||||||||||||| | || |||||||| ||||| ||| | ||||||||||  |||||||| ||||    
T  9566585 cagcttcggtgcctctgcaagtccttcaattctcttatttctgatccaaaattcgcaaaaaaacatcttcaattgtcaacaaagc 9566501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 2491354 - 2491467
Alignment:
Q  48 tgtgtagaattccggtaaagttactcattcagcttcgctgcctctgtaagtccttcaattctttaatctctgatcccaaatttgcagagaaacatcttcg 147  Q
    |||||||  ||||||| || |||||  | |||||||| ||||| |||||||  |||||||||||||| |||||||| ||||| ||| | || |||||||     
T  2491354 tgtgtaggcttccggtgaaattactggtacagcttcgatgcctttgtaagtttttcaattctttaatttctgatcctaaattcgcaaaaaagcatcttca 2491453  T
Q  148 cttgtcaaccaagc 161  Q
     |||||||| ||||    
T  2491454 attgtcaacaaagc 2491467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 7335063 - 7334950
Alignment:
Q  48 tgtgtagaattccggtaaagttactcattcagcttcgctgcctctgtaagtccttcaattctttaatctctgatcccaaatttgcagagaaacatcttcg 147  Q
    |||||||  ||||||| || |||||| | |||||||| || |||||||||| ||| |||||| | ||||||||||| ||||| ||| |||| || ||||     
T  7335063 tgtgtaggcttccggtgaaattactcgtacagcttcgatgtctctgtaagttctttaattctgttatctctgatccaaaattcgcaaagaagcaccttca 7334964  T
Q  148 cttgtcaaccaagc 161  Q
     |||||||| ||||    
T  7334963 attgtcaacaaagc 7334950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 755395 - 755311
Alignment:
Q  77 cagcttcgctgcctctgtaagtccttcaattctttaatctctgatcccaaatttgcagagaaacatcttcgcttgtcaaccaagc 161  Q
    ||||| || |||||||||||||| ||||||||| | || |||||||| ||||| ||| | ||||||||||  |||||||| ||||    
T  755395 cagctgcggtgcctctgtaagtctttcaattctcttatttctgatccaaaattcgcaaaaaaacatcttcaattgtcaacaaagc 755311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 759450 - 759390
Alignment:
Q  95 aagtccttcaattctttaatctctgatcccaaatttgcagagaaacatcttcgcttgtcaa 155  Q
    ||||||||||||||| || |||| |||||||| |||||| |||| || |||||||||||||    
T  759450 aagtccttcaattctatagtctccgatcccaattttgcaaagaaccaccttcgcttgtcaa 759390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 80 - 155
Target Start/End: Complemental strand, 23231783 - 23231708
Alignment:
Q  80 cttcgctgcctctgtaagtccttcaattctttaatctctgatcccaaatttgcagagaaacatcttcgcttgtcaa 155  Q
    ||||| || ||| |||||||||||||| |  |||||||||||||||| || ||| ||||||| |||||||| ||||    
T  23231783 cttcgatgtctcagtaagtccttcaataccctaatctctgatcccaatttcgcaaagaaacaccttcgcttatcaa 23231708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 2474413 - 2474482
Alignment:
Q  77 cagcttcgctgcctctgtaagtccttcaattctttaatctctgatcccaaatttgcagagaaacatcttc 146  Q
    |||||||| ||||||||||||| ||| ||||||||||| ||  |||||| ||| ||| ||||||| ||||    
T  2474413 cagcttcggtgcctctgtaagttctttaattctttaatttccaatcccagattcgcaaagaaacaccttc 2474482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 2659934 - 2659821
Alignment:
Q  48 tgtgtagaattccggtaaagttactcattcagcttcgctgcctctgtaagtccttcaattctttaatctctgatcccaaatttgcagagaaacatcttcg 147  Q
    |||||||  ||||||| || |||||| | |||||||| ||| | |||||||  ||||||||| | || |||||||| || || ||| |||| ||||||||    
T  2659934 tgtgtaggcttccggtgaaattactcgtacagcttcgatgcgtttgtaagtttttcaattctcttatttctgatcctaatttcgcaaagaagcatcttcg 2659835  T
Q  148 cttgtcaaccaagc 161  Q
      ||||||||||||    
T  2659834 tatgtcaaccaagc 2659821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 9562783 - 9562642
Alignment:
Q  20 cttccgtttgatcttgttgcagaaattttgtgtagaattccggtaaagttactcattcagcttcgctgcctctgtaagtccttcaattctttaatctctg 119  Q
    ||||| ||||||||| |  | |||||| | |||||  ||||||| || |||||  | |||||||| || || ||| ||| ||||||||||||||| ||      
T  9562783 cttccttttgatcttctgcctgaaattctctgtaggcttccggtgaaattacttgtacagcttcgatgtctgtgtgagttcttcaattctttaatttcca 9562684  T
Q  120 atcccaaatttgcagagaaacatcttcgcttgtcaaccaagc 161  Q
    |||||||||||||| |||| || ||||  |||||||| ||||    
T  9562683 atcccaaatttgcaaagaagcaccttcaattgtcaactaagc 9562642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 159
Target Start/End: Complemental strand, 7398937 - 7398853
Alignment:
Q  75 ttcagcttcgctgcctctgtaagtccttcaattctttaatctctgatcccaaatttgcagagaaacatcttcgcttgtcaaccaa 159  Q
    |||| ||||| ||||||||||||| ||||||| |  | ||||||||| |||||||| || ||||||| |||| | ||||| ||||    
T  7398937 ttcaacttcgatgcctctgtaagttcttcaatacccttatctctgattccaaatttacaaagaaacaccttcacatgtcagccaa 7398853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 158
Target Start/End: Complemental strand, 24418290 - 24418152
Alignment:
Q  20 cttccgtttgatcttgttgcagaaattttgtgtagaattccggtaaagttactcattcagcttcgctgcctctgtaagtccttcaattctttaatctctg 119  Q
    ||||| || |||||||| || || ||| |||||||  |||| || ||||||||| |||| |||||||| ||||| |||||||||||||| ||||||||||    
T  24418290 cttcccttcgatcttgtagctgagattctgtgtaggcttcccgtgaagttactccttcaacttcgctgtctctgcaagtccttcaattcattaatctctg 24418191  T
Q  120 atcccaaatttgcagagaaacatcttcgcttgtcaacca 158  Q
    |||||||||| ||| | || || ||||||||||||||||    
T  24418190 atcccaaattcgcaaacaagcaccttcgcttgtcaacca 24418152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 158
Target Start/End: Original strand, 27754913 - 27755006
Alignment:
Q  65 aagttactcattcagcttcgctgcctctgtaagtccttcaattctttaatctctgatcccaaatttgcagagaaacatcttcgcttgtcaacca 158  Q
    ||||||||  |||| ||| | ||||||||||||||||| |||||||||||||| ||||| ||||||||  ||||||| ||||||||||||||||    
T  27754913 aagttactacttcaactttgatgcctctgtaagtcctttaattctttaatctccgatccaaaatttgccaagaaacaccttcgcttgtcaacca 27755006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 33037377 - 33037512
Alignment:
Q  20 cttccgtttgatcttgttgcagaaattttgtgtagaattccggtaaagttactcattcagcttcgctgcctctgtaagtccttcaattctttaatctctg 119  Q
    |||||||||||||| || || |||||| | || ||| ||||||||||  | |||||||| ||||| || |||||||||||  ||||||| ||||| ||||    
T  33037377 cttccgtttgatctcgtcgctgaaattctatgcagacttccggtaaaactcctcattcaacttcgatgtctctgtaagtctatcaattcgttaatttctg 33037476  T
Q  120 atcccaaatttgcagagaaacatcttcgcttgtcaa 155  Q
    |||| ||||| ||  |||||||||||||| ||||||    
T  33037477 atcctaaattcgctaagaaacatcttcgcatgtcaa 33037512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1004 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1004
Description:

Target: scaffold1004; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 1376 - 1478
Alignment:
Q  20 cttccgtttgatcttgttgcagaaattttgtgtagaattccggtaaagttactcattcagcttcgctgcctctgtaagtccttcaattctttaatctctg 119  Q
    |||||||| ||||||||||| |||||  |||||||| |||| || || |||||| ||||  |||||||| |||| ||||| ||||| || ||||| ||||    
T  1376 cttccgttagatcttgttgccgaaatcctgtgtagacttcccgtgaaattactccttcaatttcgctgcgtctgcaagtctttcaaatcgttaatttctg 1475  T
Q  120 atc 122  Q
    |||    
T  1476 atc 1478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 163
Target Start/End: Original strand, 33937 - 34043
Alignment:
Q  57 ttccggtaaagttactcattcagcttcgctgcctctgtaagtccttcaattctttaatctctgatcccaaatttgcagagaaacatcttcgcttgtcaac 156  Q
    ||||||| || |||||||| || || || ||||||||||||| |||  ||||||| ||||| |||||||| || ||| ||||||| ||||   |||||||    
T  33937 ttccggtcaaattactcatacaactccgatgcctctgtaagttctttgattctttgatctcagatcccaatttcgcaaagaaacaccttcatatgtcaac 34036  T
Q  157 caagcac 163  Q
    |||||||    
T  34037 caagcac 34043  T

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Target: chr5 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 20305085 - 20305212
Alignment:
Q  29 gatcttgttgcagaaattttgtgtagaattccggtaaagttactcattcagcttcgctgcctctgtaagtccttcaattctttaatctctgatcccaaat 128  Q
    ||||| |||||||||||| | || ||| ||||  | ||||||||| | || ||||| || || |  ||||||||||||||| ||||| | ||||||||||    
T  20305085 gatctggttgcagaaattctatgcagacttcccattaagttactcttgcaacttcggtgtctttccaagtccttcaattctctaatcaccgatcccaaat 20305184  T
Q  129 ttgcagagaaacatcttcgcttgtcaac 156  Q
    | ||  |||| || ||||||||||||||    
T  20305185 tcgccaagaagcaccttcgcttgtcaac 20305212  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 20309489 - 20309616
Alignment:
Q  29 gatcttgttgcagaaattttgtgtagaattccggtaaagttactcattcagcttcgctgcctctgtaagtccttcaattctttaatctctgatcccaaat 128  Q
    ||||| |||||||||||| | || ||| ||||  | ||||||||| | || ||||| || || |  ||||||||||||||| ||||| | ||||||||||    
T  20309489 gatctggttgcagaaattctatgcagacttcccattaagttactcttgcaacttcggtgtctttccaagtccttcaattctctaatcaccgatcccaaat 20309588  T
Q  129 ttgcagagaaacatcttcgcttgtcaac 156  Q
    | ||  |||| || ||||||||||||||    
T  20309589 tcgccaagaagcaccttcgcttgtcaac 20309616  T

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Target: scaffold0760 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0760
Description:

Target: scaffold0760; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 3870 - 3972
Alignment:
Q  20 cttccgtttgatcttgttgcagaaattttgtgtagaattccggtaaagttactcattcagcttcgctgcctctgtaagtccttcaattctttaatctctg 119  Q
    |||||||| ||||||||||| |||||  |||||||  |||| || || |||||| ||||  |||||||| |||| ||||| ||||| || ||||| ||||    
T  3870 cttccgttagatcttgttgccgaaatcctgtgtaggcttcccgtgaaattactccttcaatttcgctgcgtctgcaagtctttcaaatccttaatttctg 3969  T
Q  120 atc 122  Q
    |||    
T  3970 atc 3972  T

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