View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7457_low_13 (Length: 332)

Name: NF7457_low_13
Description: NF7457
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7457_low_13
NF7457_low_13
[»] chr4 (13 HSPs)
chr4 (10-318)||(4009158-4009466)
chr4 (10-318)||(3956142-3956450)
chr4 (22-318)||(3800762-3801056)
chr4 (72-318)||(4024456-4024702)
chr4 (64-318)||(3986211-3986465)
chr4 (26-318)||(3920398-3920690)
chr4 (72-318)||(3816823-3817066)
chr4 (72-315)||(3809237-3809480)
chr4 (26-313)||(3933627-3933911)
chr4 (105-318)||(4217897-4218110)
chr4 (72-318)||(4001530-4001774)
chr4 (111-318)||(4017980-4018187)
chr4 (72-291)||(3963948-3964164)
[»] chr5 (1 HSPs)
chr5 (10-318)||(13397110-13397417)
[»] chr8 (2 HSPs)
chr8 (72-251)||(7074735-7074914)
chr8 (176-254)||(7037045-7037123)


Alignment Details
Target: chr4 (Bit Score: 249; Significance: 1e-138; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 10 - 318
Target Start/End: Original strand, 4009158 - 4009466
Alignment:
Q  10 aagaatatcaaaatattttttaccaaaattacaaatgttatctaaaatcgccaaatatattataccttgtcgtttttcaatacatcatagataatatcag 109  Q
    ||||| ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4009158 aagaaaatcaaaatactttttaccaaaatgacaaatgttatctaaaattgccaaatatattttaccttgtcgtttttcaatacatcatagataatatcag 4009257  T
Q  110 gatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccgacccatttcttgtagaatgtcatgcatagatataacatt 209  Q
    ||||||||| | ||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4009258 gatcccatagttgactgcattttataggatcttcactagattcttaacgaacaacctcccgacccatttcttgtagaatgtcatgcatagatattacatt 4009357  T
Q  210 atcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcattatcactttcaaaatctttcagtaaaagtttcatgtaa 309  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  4009358 atcttcagaaattgttataagagctttatcttttaacctttctaacccaatagccactgcattatcactttcaaaatctttcaataaaagtttcatgcaa 4009457  T
Q  310 tccactttc 318  Q
    |||||||||    
T  4009458 tccactttc 4009466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 10 - 318
Target Start/End: Complemental strand, 3956450 - 3956142
Alignment:
Q  10 aagaatatcaaaatattttttaccaaaattacaaatgttatctaaaatcgccaaatatattataccttgtcgtttttcaatacatcatagataatatcag 109  Q
    ||||| |||||||||||||| |||| ||  |||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||||||||||||    
T  3956450 aagaaaatcaaaatatttttcaccagaaagacaaatgttatctaaaattgccaaatattttttaccttgtcatttttcaatacatcatagataatatcag 3956351  T
Q  110 gatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccgacccatttcttgtagaatgtcatgcatagatataacatt 209  Q
    |||   ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3956350 gattggataatcgactgcattttctagggtcttcactggattcttggcgaacaacctcccgacccatttcttgtagaatgtcatgcatggatataacatt 3956251  T
Q  210 atcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcattatcactttcaaaatctttcagtaaaagtttcatgtaa 309  Q
    |||||||||||| |||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3956250 atcttcagaaattgttataagagatttatctttcaacctttctaaaccaacagccactgcattatcactttcaaaatctttcaataaaagtttcatgtaa 3956151  T
Q  310 tccactttc 318  Q
    |||||||||    
T  3956150 tccactttc 3956142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 22 - 318
Target Start/End: Original strand, 3800762 - 3801056
Alignment:
Q  22 atattttttaccaaaattacaaatgttatctaaaatcgccaaatatattataccttgtcgtttttcaatacatcatagataatatcaggatcccataatc 121  Q
    |||||||| |||||||| ||| ||||||||| |||| ||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||      
T  3800762 atatttttaaccaaaataacatatgttatctgaaatagccaaatattttttaccttgtcatttttcaatacatcatagataatatcaggatcccataaat 3800861  T
Q  122 gactgcattttctagggtcttcactagattcttgacgaacaacctcccgacccatttcttgtagaatgtcatgcatagatataacattatcttcagaaat 221  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||   ||||||    
T  3800862 gactgcattttctagggtcttcactatattcttggcgaacaacctcccgacccatttctcatagaatgtcatgcatagatataacattatc--gagaaat 3800959  T
Q  222 agttataagagatttatcttttaacctttctaacccaatagccactgcattatcactttcaaaatctttcagtaaaagtttcatgtaatccactttc 318  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  3800960 agttataagagctttatcttttaacctttctaacccaacagccactgaattatcactttcacaatctttcagtaaaattttcatgtaatccactttc 3801056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 72 - 318
Target Start/End: Original strand, 4024456 - 4024702
Alignment:
Q  72 taccttgtcgtttttcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccga 171  Q
    ||||||||| |||| |||||||||| | ||   |||| |||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||    
T  4024456 taccttgtcattttccaatacatcacaaatgtcatcatgatcccataatcgactgcgttttctagggtctgcactagattcttggcgaacaacctcccga 4024555  T
Q  172 cccatttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcat 271  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| | ||||||||||| |||| |||||||| ||    
T  4024556 cccatttcttgtagaatgtcatgcatagatataatattatcttcagaaatagttataagagctttatctctcaacctttctaaaccaacagccactgaat 4024655  T
Q  272 tatcactttcaaaatctttcagtaaaagtttcatgtaatccactttc 318  Q
    |||| |||||| ||||||||| |||||||||||||||||||||||||    
T  4024656 tatcgctttcacaatctttcaataaaagtttcatgtaatccactttc 4024702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 64 - 318
Target Start/End: Original strand, 3986211 - 3986465
Alignment:
Q  64 atatattataccttgtcgtttttcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaa 163  Q
    |||| |||||||||||| ||||| || |||||  | ||   |||| |||||||||||||||||| |||  | |||| ||||||||||||||| |||||||    
T  3986211 atattttataccttgtcattttttaagacatcgcaaatttcatcatgatcccataatcgactgcgtttgtttgggtattcactagattcttggcgaacaa 3986310  T
Q  164 cctcccgacccatttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagc 263  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||| ||||| |||    
T  3986311 cctcccgacccatttcttgaagaatgtcatgcatagatataacattatcttcagaaatagttatgagagctttatctttcaacctttctatcccaacagc 3986410  T
Q  264 cactgcattatcactttcaaaatctttcagtaaaagtttcatgtaatccactttc 318  Q
    ||||| |||||||| |||| ||||||||| |||||||||||||||||||||||||    
T  3986411 cactgaattatcaccttcacaatctttcaataaaagtttcatgtaatccactttc 3986465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 26 - 318
Target Start/End: Complemental strand, 3920690 - 3920398
Alignment:
Q  26 tttttaccaaaattacaaatgttatctaaaatcgccaaatatattataccttgtcgtttttcaatacatcatagataatatcaggatcccataatcgact 125  Q
    ||||||||||||| || | |||||||| |||  |||| |||   | ||||||||| ||||||||||||||| | ||   ||||  |||||||||||||||    
T  3920690 tttttaccaaaatgactattgttatctgaaaatgccatataatgtttaccttgtcatttttcaatacatcacaaatgtcatcaacatcccataatcgact 3920591  T
Q  126 gcattttctagggtcttcactagattcttgacgaacaacctcccgacccatttcttgtagaatgtcatgcatagatataacattatcttcagaaatagtt 225  Q
    || ||||  ||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3920590 gcgtttttcagggtgttctctagattcttggcgaactacctcccgacccatttcttgtagaatgtcatgcatagatataacattatcttcagaaatagtt 3920491  T
Q  226 ataagagatttatcttttaacctttctaacccaatagccactgcattatcactttcaaaatctttcagtaaaagtttcatgtaatccactttc 318  Q
    ||||||| ||||||||| || ||||||||||||  ||||||   ||||||||| ||| ||||||||| |||| ||||||||||||||||||||    
T  3920490 ataagagctttatctttcaagctttctaacccaccagccacgtaattatcactatcacaatctttcaataaatgtttcatgtaatccactttc 3920398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 72 - 318
Target Start/End: Original strand, 3816823 - 3817066
Alignment:
Q  72 taccttgtcgtttttcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccga 171  Q
    ||||||||| ||||||||||||||||| ||   |||||||| |||||||||||||| ||||| | ||||   |||||||||||| ||||||| ||||| |    
T  3816823 taccttgtcatttttcaatacatcataaatttcatcaggattccataatcgactgcgttttccaaggtc---actagattcttgccgaacaatctcccaa 3816919  T
Q  172 cccatttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcat 271  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||  ||||||   ||    
T  3816920 cccatttcttgaagaatgtcatgcatagatataacattatcttcagaaatagttataagagctttatctttcaacgtttctaacccaccagccacgtaat 3817019  T
Q  272 tatcactttcaaaatctttcagtaaaagtttcatgtaatccactttc 318  Q
    ||||||| ||| ||||||||| |||| ||||||||||||||||||||    
T  3817020 tatcactatcacaatctttcaataaatgtttcatgtaatccactttc 3817066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 72 - 315
Target Start/End: Original strand, 3809237 - 3809480
Alignment:
Q  72 taccttgtcgtttttcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccga 171  Q
    ||||||||| ||||||||||||||||| ||   |||||||| |||||||||||||| ||||  ||||| ||| ||||||||||| ||||| |||||||||    
T  3809237 taccttgtcatttttcaatacatcataaatttcatcaggattccataatcgactgcgtttttcagggtgttctctagattcttggcgaactacctcccga 3809336  T
Q  172 cccatttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcat 271  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||| || ||||||||||||  |||||||| ||    
T  3809337 cccatttcttgtagaatgtcatgcatagatataacattatattcagaaatagttataagagctttgtctttcaagctttctaacccagcagccactgaat 3809436  T
Q  272 tatcactttcaaaatctttcagtaaaagtttcatgtaatccact 315  Q
    ||||||| | | ||||||||| ||||||| | |||||| |||||    
T  3809437 tatcactgttagaatctttcaataaaagtgttatgtaacccact 3809480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 26 - 313
Target Start/End: Complemental strand, 3933911 - 3933627
Alignment:
Q  26 tttttaccaaaattacaaatgttatctaaaatcgccaaatatattataccttgtcgtttttcaatacatcatagataatatcaggatcccataatcgact 125  Q
    ||||||||||||| || | |||||||| |||  |||| |||   | ||||||||| ||||||||||||||| | ||   ||||  |||||||||||||||    
T  3933911 tttttaccaaaatgactattgttatctgaaaatgccatataatgtttaccttgtcatttttcaatacatcaaaaatgtcatcaacatcccataatcgact 3933812  T
Q  126 gcattttctagggtcttcactagattcttgacgaacaacctcccgacccatttcttgtagaatgtcatgcatagatataacattatcttcagaaatagtt 225  Q
    |||||||| | ||||   |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3933811 gcattttccaaggtc---actagattcttgccgaacaacctcccaacccatttcttgaagaatgtcatgcatagatataacattatcttcagaaatagtt 3933715  T
Q  226 ataagagatttatcttttaacctttctaacccaatagccactgcattatcactttcaaaatctttcagtaaaagtttcatgtaatcca 313  Q
    ||||||| ||||||||| ||| |||||||||||  ||||||   ||||||||| ||| ||||||||| |||| |||||||||||||||    
T  3933714 ataagagctttatctttcaacgtttctaacccaccagccacgtaattatcactatcacaatctttcaataaatgtttcatgtaatcca 3933627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 105 - 318
Target Start/End: Original strand, 4217897 - 4218110
Alignment:
Q  105 atcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccgacccatttcttgtagaatgtcatgcatagatata 204  Q
    ||||||||||||||| |||||   ||| |||||||||| | |||||||| | |||||||||||||||||||| | |||| ||| |||||||||||||||     
T  4217897 atcaggatcccataaccgactttgtttactagggtctttaatagattctaggcgaacaacctcccgacccatcttttgttgaaagtcatgcatagatatt 4217996  T
Q  205 acattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcattatcactttcaaaatctttcagtaaaagtttca 304  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||  ||||||| ||||||||||||| ||||||||| |||||||||||    
T  4217997 acattatcttcagaaatagtaataagagctttatctttcaacctttctaacccaacggccactgaattatcactttcataatctttcaataaaagtttca 4218096  T
Q  305 tgtaatccactttc 318  Q
    ||||||||||||||    
T  4218097 tgtaatccactttc 4218110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 72 - 318
Target Start/End: Original strand, 4001530 - 4001774
Alignment:
Q  72 taccttgtcgtttttcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccga 171  Q
    ||||||||| |||||||||||||   | ||   ||||||||||||||| ||||| | ||| ||||||||||||||||||||||| |||||||||||||||    
T  4001530 taccttgtcatttttcaatacatagcaaatgtcatcaggatcccataaccgacttcgtttactagggtcttcactagattcttggcgaacaacctcccga 4001629  T
Q  172 cccatttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcat 271  Q
    ||||||||||||| ||||||||||||||||| |||||||| ||  |||||||||||||||| ||||||||| ||||||||||| |||| | |||||| ||    
T  4001630 cccatttcttgtaaaatgtcatgcatagatacaacattatatttcgaaatagttataagagctttatctttcaacctttctaaaccaacaaccactgaat 4001729  T
Q  272 tatcactttcaaaatctttcagtaaaagtttcatgtaatccactttc 318  Q
    | ||||||||  | ||| | | || | ||||||||||||||||||||    
T  4001730 tgtcactttc--agtctcttaatagatgtttcatgtaatccactttc 4001774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 111 - 318
Target Start/End: Original strand, 4017980 - 4018187
Alignment:
Q  111 atcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccgacccatttcttgtagaatgtcatgcatagatataacatta 210  Q
    ||||||||| ||||| ||  ||| ||||||| || | |||||||| |||||||  |||| |||||||||||||| |||||||||||| ||||||||||||    
T  4017980 atcccataaccgactacagcttccagggtctccatttgattcttggcgaacaatttccctacccatttcttgtataatgtcatgcatggatataacatta 4018079  T
Q  211 tcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcattatcactttcaaaatctttcagtaaaagtttcatgtaat 310  Q
    |||| ||||| || |||||||  ||||||||| ||||||||||||||| | || |||| ||||||||||||| |||||||||  |||| ||| ||||| |    
T  4018080 tctttagaaaaagatataagacctttatctttcaacctttctaacccactggctactgaattatcactttcagaatctttcaacaaaaattttatgtagt 4018179  T
Q  311 ccactttc 318  Q
    ||||||||    
T  4018180 ccactttc 4018187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 72 - 291
Target Start/End: Complemental strand, 3964164 - 3963948
Alignment:
Q  72 taccttgtcgtttttcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccga 171  Q
    ||||||||| ||||| ||||| |||||   ||| |||  ||||||||||||||| |   ||| ||||||| |||| |||||||| ||||||| ||||| |    
T  3964164 taccttgtcattttttaatacttcata---aatgtcatcatcccataatcgactacggcttccagggtctccacttgattcttggcgaacaatctcccta 3964068  T
Q  172 cccatttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcat 271  Q
    ||||| ||||||| |||  ||||||||||||||||||||| || ||||| ||  | ||||  ||||||||| ||||||||||||||| | || |||| ||    
T  3964067 cccatgtcttgtataattccatgcatagatataacattatgtttagaaacagaaacaagatctttatctttcaacctttctaacccactggctactgaat 3963968  T
Q  272 tatcactttcaaaatctttc 291  Q
    ||||||||||| ||||||||    
T  3963967 tatcactttcagaatctttc 3963948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 10 - 318
Target Start/End: Original strand, 13397110 - 13397417
Alignment:
Q  10 aagaatatcaaaatattttttaccaaaattacaaatgttatctaaaatcgccaaatatattataccttgtcgtttttcaatacatcatagataatatcag 109  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||| | || ||||||||| |||||||||||||| |||||||||||||    
T  13397110 aagaaaatcaaaatattttttaccaaaatgacaaatgttatctaaaattgccaaatttttt-taccttgtcatttttcaatacatcgtagataatatcag 13397208  T
Q  110 gatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccgacccatttcttgtagaatgtcatgcatagatataacatt 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  13397209 gatcccataatcgactgcattttctagggtcttcactagattcttggcgaacaacctcgcgacccatttcctgtagaatgtcatgcatagatataacatt 13397308  T
Q  210 atcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcattatcactttcaaaatctttcagtaaaagtttcatgtaa 309  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||||||||||||| || | ||||||||||||| ||||||||| |||||||||||||||     
T  13397309 atctttagaaatagttataagagctttatctttcaacctttctaacccaatagctacagaattatcactttcataatctttcaataaaagtttcatgtac 13397408  T
Q  310 tccactttc 318  Q
    |||||||||    
T  13397409 tccactttc 13397417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 251
Target Start/End: Original strand, 7074735 - 7074914
Alignment:
Q  72 taccttgtcgtttttcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccga 171  Q
    ||||||||| | ||||||||||| ||| ||   |||||||||| ||| ||| || |  |||| ||| ||||||  ||||||||| ||||||| ||||| |    
T  7074735 taccttgtcatctttcaatacatgataaatgtcatcaggatccaatagtcggcttcggtttccaggttcttcaacagattcttggcgaacaatctcccta 7074834  T
Q  172 cccatttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttc 251  Q
     |  ||||||||| |||||||||||| |||| ||   | | || ||||||||||| ||||| ||||||||||| ||||||    
T  7074835 gctgtttcttgtataatgtcatgcattgatacaatgctttgttgagaaatagttacaagagctttatcttttagcctttc 7074914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 254
Target Start/End: Complemental strand, 7037123 - 7037045
Alignment:
Q  176 tttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaa 254  Q
    ||||||||| |||||||||||| |||| || | | | || ||||||||||| ||||| ||||||||||| ||| |||||    
T  7037123 tttcttgtataatgtcatgcattgatacaataatttattgagaaatagttacaagagctttatcttttagcctgtctaa 7037045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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