View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7457_low_14 (Length: 325)
Name: NF7457_low_14
Description: NF7457
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7457_low_14 |
 |  |
|
| [»] scaffold0294 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 127; Significance: 1e-65; HSPs: 21)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 129 - 316
Target Start/End: Original strand, 5065365 - 5065554
Alignment:
| Q |
129 |
aaagcattcattttcatcactactactaacaataccactcttatcttgtgcatgacactcctccactttttcagcaatcagtccatcatatataagataa |
228 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| | ||||||||||| || |||||||||| |||||| |
|
|
| T |
5065365 |
aaagcattcattttcatcaccgctactaacaataacattcttatcttgtgcatgacactcctcccccttttcagcaattggttcatcatatatgagataa |
5065464 |
T |
 |
| Q |
229 |
actgttgtcctcttcacaacgaaaccattctcaaaaacaacaacaaaatccactttgtttcc--gttcaatacttgacactactctctgc |
316 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| |
|
|
| T |
5065465 |
actgttgtcctcttcacaacgaaaccgttctcaaaaacaacaacaaaatccactttatttccaggttcaatacttgatactactctctgc |
5065554 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 122 - 301
Target Start/End: Complemental strand, 5253919 - 5253738
Alignment:
| Q |
122 |
ttctgacaaagcattcattttcatcactactactaacaataccactcttatcttgtgcatgacactcctccactttttcagcaatcagtccatcatatat |
221 |
Q |
| |
|
|||| ||||| ||||||||||||| || ||||||||||||| || || |||||||| |||||||||||||| | ||||||||||| | | |||||||| |
|
|
| T |
5253919 |
ttctaacaaaacattcattttcataaccactactaacaataacattcatatcttgtccatgacactcctccgccttttcagcaatgggctcgtcatatat |
5253820 |
T |
 |
| Q |
222 |
aagataaactgttgtcctcttcacaacgaaaccattctcaaaaacaacaacaaaatccactttgtttcc--gttcaatactt |
301 |
Q |
| |
|
||||||||||| ||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||| ||||||||||| |
|
|
| T |
5253819 |
gagataaactgtcgtcctcttcacaatgaaactgttctcaaaaacaacaacaaactccactttatttccaggttcaatactt |
5253738 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 161
Target Start/End: Original strand, 5065195 - 5065322
Alignment:
| Q |
32 |
cattgtttt-ttgtcttccatttcctcttgagaattttcttccttcttttatctgttaagtcatcaaccggcgccacttgaggagagacttttctgacaa |
130 |
Q |
| |
|
||||||||| |||||||||||||||| | |||| |||||||| |||| || | ||||||||||| || || ||||||||||||||||||||||||||| |
|
|
| T |
5065195 |
cattgttttattgtcttccatttcctttggagatttttcttc-ttctgttgt--gttaagtcatccacaggaaccacttgaggagagacttttctgacaa |
5065291 |
T |
 |
| Q |
131 |
agcattcattttcatcactactactaacaat |
161 |
Q |
| |
|
||||||||||||| |||| ||||| |||||| |
|
|
| T |
5065292 |
agcattcattttcttcaccactacaaacaat |
5065322 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 114 - 315
Target Start/End: Complemental strand, 5178127 - 5177930
Alignment:
| Q |
114 |
agagacttttctgacaaagcattcattttcatcactactactaacaataccactcttatcttgtgcatgacactcctccactttttcagcaatcagtcca |
213 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||| ||||| ||||| |||| ||||| | || || | ||||| |||||| |||| || || |
|
|
| T |
5178127 |
agagacttctctgacaaagcattcatcttcatcaccactacacacaatt----tctt--cttgttcttggcattgctccattttttctccaattggttca |
5178034 |
T |
 |
| Q |
214 |
tcatatataagataaactgttgtcctcttcacaacgaaaccattctcaaaaacaacaacaaaatccactttgtttc--cgttcaatacttgacactactc |
311 |
Q |
| |
|
||||||| |||||||||||||| ||||||||| |||||| ||||||||||||||||||| ||||||||||| | |||| |||||||| ||||||| |
|
|
| T |
5178033 |
tcatatacgagataaactgttgttttcttcacaatgaaaccgttctcaaaaacaacaacaacctccactttgttacaaggttctatacttgatactactc |
5177934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 203 - 287
Target Start/End: Original strand, 23127300 - 23127384
Alignment:
| Q |
203 |
caatcagtccatcatatataagataaactgttgtcctcttcacaacgaaaccattctcaaaaacaacaacaaaatccactttgtt |
287 |
Q |
| |
|
|||| ||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||| |||||| |
|
|
| T |
23127300 |
caattagttcatcatatacaagataaactgttgtattcttcacaacgaaaccattctcaaaaacgacaacaacctccattttgtt |
23127384 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 315
Target Start/End: Complemental strand, 5279860 - 5279755
Alignment:
| Q |
212 |
catcatatataagataaactgttgtcctcttcacaacgaaaccattctcaaaaacaacaacaaaatccactttgtttc--cgttcaatacttgacactac |
309 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||| |||||| ||||||||||||||||||| ||||||||||| | |||| |||||||| ||||| |
|
|
| T |
5279860 |
catcatatacgagataaactgttgttttcttcacaatgaaaccgttctcaaaaacaacaacaacctccactttgttacaaggttctatacttgatactac |
5279761 |
T |
 |
| Q |
310 |
tctctg |
315 |
Q |
| |
|
|||||| |
|
|
| T |
5279760 |
tctctg |
5279755 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 5126283 - 5126427
Alignment:
| Q |
18 |
aatacttacccaaccattgttttt-tgtcttccatttcctcttgagaattttcttccttcttttatctgttaagtcatcaaccggcgccacttgaggaga |
116 |
Q |
| |
|
|||||||| ||||||||| |||| |||||||||| |||||||||||||||||||| || | |||| |||| ||||||| || |||||||||||||| |
|
|
| T |
5126283 |
aatacttatccaaccattcttttactgtcttccatctcctcttgagaattttcttctttttgttatgctttaaatcatcaatgggagccacttgaggaga |
5126382 |
T |
 |
| Q |
117 |
gacttttctgacaaagcattcattttcatcactactactaacaat |
161 |
Q |
| |
|
|| || |||||||||| ||| ||||| ||| ||||| |||||| |
|
|
| T |
5126383 |
taccttcctgacaaagccttccttttcttcagcactacaaacaat |
5126427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 181
Target Start/End: Complemental strand, 5178210 - 5178132
Alignment:
| Q |
103 |
gccacttgaggagagacttttctgacaaagcattcattttcatcactactactaacaataccactcttatcttgtgcat |
181 |
Q |
| |
|
||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||| || | | ||||||||||| |
|
|
| T |
5178210 |
gccacttgaggagagacatttctgacaacacattcattttcatcaccactactaacaatgacattgtaatcttgtgcat |
5178132 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 315
Target Start/End: Complemental strand, 5346325 - 5346220
Alignment:
| Q |
212 |
catcatatataagataaactgttgtcctcttcacaacgaaaccattctcaaaaacaacaacaaaatccactttgtttcc--gttcaatacttgacactac |
309 |
Q |
| |
|
|||||||||| ||||||| || |||| ||||||||| |||||||||||||| |||||| |||| ||||||||||| || |||| |||||||| || || |
|
|
| T |
5346325 |
catcatatatgagataaattgctgtcttcttcacaatgaaaccattctcaataacaacgacaacctccactttgttaccaggttctatacttgatacaac |
5346226 |
T |
 |
| Q |
310 |
tctctg |
315 |
Q |
| |
|
|||||| |
|
|
| T |
5346225 |
tctctg |
5346220 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 315
Target Start/End: Original strand, 5688902 - 5689007
Alignment:
| Q |
212 |
catcatatataagataaactgttgtcctcttcacaacgaaaccattctcaaaaacaacaacaaaatccactttgtttc--cgttcaatacttgacactac |
309 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||| |||||| |||||||||||| ||||| ||||||||||| | |||| |||||||| ||||| |
|
|
| T |
5688902 |
catcatatacgagataaactgttgttttcttcacaatgaaaccgttctcaaaaacagaaacaacctccactttgttacaaggttctatacttgatactac |
5689001 |
T |
 |
| Q |
310 |
tctctg |
315 |
Q |
| |
|
|||||| |
|
|
| T |
5689002 |
tctctg |
5689007 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 314
Target Start/End: Original strand, 5126628 - 5126732
Alignment:
| Q |
212 |
catcatatataagataaactgttgtcctcttcacaacgaaaccattctcaaaaacaacaacaaaatccactttgtttcc--gttcaatacttgacactac |
309 |
Q |
| |
|
|||||||||| |||||||| | |||| ||||||||| |||||| |||| |||||||||||||| || |||||||| || ||| |||||||| ||||| |
|
|
| T |
5126628 |
catcatatatgagataaacagctgtcttcttcacaatgaaaccgttcttaaaaacaacaacaatctcaactttgttaccagcttctatacttgatactac |
5126727 |
T |
 |
| Q |
310 |
tctct |
314 |
Q |
| |
|
||||| |
|
|
| T |
5126728 |
tctct |
5126732 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 5688716 - 5688769
Alignment:
| Q |
103 |
gccacttgaggagagacttttctgacaaagcattcattttcatcactactacta |
156 |
Q |
| |
|
||||||||||||||||| |||||||||| |||||||||||||||| ||||||| |
|
|
| T |
5688716 |
gccacttgaggagagacatttctgacaacacattcattttcatcaccactacta |
5688769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 5280040 - 5279988
Alignment:
| Q |
104 |
ccacttgaggagagacttttctgacaaagcattcattttcatcactactacta |
156 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||||||||| ||||||| |
|
|
| T |
5280040 |
ccacttgaggagagacatttctgacaacacattcattttcatcaccactacta |
5279988 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 5398341 - 5398286
Alignment:
| Q |
213 |
atcatatataagataaactgttgtcctcttcacaacgaaaccattctcaaaaacaa |
268 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||| |||| ||||||| ||||||| |
|
|
| T |
5398341 |
atcatatacaagataaactgttgtcttcttcacaatgaaatcattctcgaaaacaa |
5398286 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 287
Target Start/End: Complemental strand, 5098530 - 5098432
Alignment:
| Q |
189 |
ctccactttttcagcaatcagtccatcatatataagataaactgttgtcctcttcacaacgaaaccattctcaaaaacaacaacaaaatccactttgtt |
287 |
Q |
| |
|
||||||||||||| |||| || ||||||||| |||||||||| |||| | ||||||| ||||| ||||| |||||||||| | ||||||||||| |
|
|
| T |
5098530 |
ctccactttttcaccaatttgttcatcatataccagataaactgctgtctttttcacaatgaaactgttctcgaaaacaacaatgacctccactttgtt |
5098432 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 5100828 - 5100916
Alignment:
| Q |
223 |
agataaactgttgtcctcttcacaacgaaaccattctcaaaaacaacaacaaaatccactttgtttcc--gttcaatacttgacactac |
309 |
Q |
| |
|
|||||||||| |||| | ||||||| ||||| ||||||||||||||||| | ||||||||||| || |||| |||||||| ||||| |
|
|
| T |
5100828 |
agataaactgctgtctttttcacaatgaaactgttctcaaaaacaacaacgacctccactttgttaccgggttctatacttgatactac |
5100916 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 284
Target Start/End: Original strand, 5124433 - 5124514
Alignment:
| Q |
203 |
caatcagtccatcatatataagataaactgttgtcctcttcacaacgaaaccattctcaaaaacaacaacaaaatccacttt |
284 |
Q |
| |
|
|||||||| |||||||||||| ||| | ||||||| |||||||| ||| | |||| |||||||| |||||| |||||||| |
|
|
| T |
5124433 |
caatcagttcatcatatataatatacattgttgtctccttcacaatgaagcggttcttaaaaacaaaaacaaattccacttt |
5124514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 5135929 - 5136017
Alignment:
| Q |
223 |
agataaactgttgtcctcttcacaacgaaaccattctcaaaaacaacaacaaaatccactttgtttcc--gttcaatacttgacactac |
309 |
Q |
| |
|
|||||||||| |||| | ||||||| ||||| ||||||||||||||||| | ||||||||||| || |||| |||||||| ||||| |
|
|
| T |
5135929 |
agataaactgctgtctttttcacaatgaaactgttctcaaaaacaacaacgacctccactttgttaccgggttctatacttgatactac |
5136017 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 313
Target Start/End: Original strand, 5242511 - 5242614
Alignment:
| Q |
212 |
catcatatataagataaactgttgtcctcttcacaacgaaaccattctcaaaaacaacaacaaaatccactttgtttcc--gttcaatacttgacactac |
309 |
Q |
| |
|
||||||||| ||||||||| |||| ||||||||| ||||| ||||||||||||| ||| | ||||||||||| || |||| |||||| | ||||| |
|
|
| T |
5242511 |
catcatatacgagataaactactgtcttcttcacaatgaaactgttctcaaaaacaaaaacgacctccactttgttaccaggttctatacttcatactac |
5242610 |
T |
 |
| Q |
310 |
tctc |
313 |
Q |
| |
|
|||| |
|
|
| T |
5242611 |
tctc |
5242614 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 5254036 - 5253988
Alignment:
| Q |
71 |
tccttcttttatctgttaagtcatcaaccggcgccacttgaggagagac |
119 |
Q |
| |
|
||||||| ||||||||||||||||| | |||||||||| ||||||||| |
|
|
| T |
5254036 |
tccttctgttatctgttaagtcatccaagggcgccactttaggagagac |
5253988 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 154
Target Start/End: Complemental strand, 5279955 - 5279915
Alignment:
| Q |
114 |
agagacttttctgacaaagcattcattttcatcactactac |
154 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||| ||||| |
|
|
| T |
5279955 |
agagacttctctgacaaagcattcatcttcatcaccactac |
5279915 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 314
Target Start/End: Original strand, 47985393 - 47985496
Alignment:
| Q |
213 |
atcatatataagataaactgttgtcctcttcacaacgaaaccattctcaaaaacaacaacaaaatccactttgtttcc--gttcaatacttgacactact |
310 |
Q |
| |
|
|||||||| ||||||||||| | |||||||||||| |||||||||||||||||||||||| | ||||||||||| || |||| |||||||| |||||| |
|
|
| T |
47985393 |
atcatatacaagataaactgctatcctcttcacaatgaaaccattctcaaaaacaacaaccacctccactttgttaccgggttctatacttgatactact |
47985492 |
T |
 |
| Q |
311 |
ctct |
314 |
Q |
| |
|
|||| |
|
|
| T |
47985493 |
ctct |
47985496 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 314
Target Start/End: Original strand, 47994680 - 47994783
Alignment:
| Q |
213 |
atcatatataagataaactgttgtcctcttcacaacgaaaccattctcaaaaacaacaacaaaatccactttgtttccg--ttcaatacttgacactact |
310 |
Q |
| |
|
|||||||| ||||||||||| | |||||||||||| |||||||||||||||||||||||| | ||||||||||| ||| ||| |||||||| |||||| |
|
|
| T |
47994680 |
atcatatacaagataaactgctatcctcttcacaatgaaaccattctcaaaaacaacaaccacctccactttgttaccggattctatacttgatactact |
47994779 |
T |
 |
| Q |
311 |
ctct |
314 |
Q |
| |
|
|||| |
|
|
| T |
47994780 |
ctct |
47994783 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 314
Target Start/End: Original strand, 48003967 - 48004070
Alignment:
| Q |
213 |
atcatatataagataaactgttgtcctcttcacaacgaaaccattctcaaaaacaacaacaaaatccactttgtttcc--gttcaatacttgacactact |
310 |
Q |
| |
|
|||||||| ||||||||||| | |||||||||||| |||||||||||||||||||||||| | ||||||||||| || |||| |||||||| |||||| |
|
|
| T |
48003967 |
atcatatacaagataaactgctatcctcttcacaatgaaaccattctcaaaaacaacaaccacctccactttgttaccgggttctatacttgatactact |
48004066 |
T |
 |
| Q |
311 |
ctct |
314 |
Q |
| |
|
|||| |
|
|
| T |
48004067 |
ctct |
48004070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 314
Target Start/End: Original strand, 48013252 - 48013355
Alignment:
| Q |
213 |
atcatatataagataaactgttgtcctcttcacaacgaaaccattctcaaaaacaacaacaaaatccactttgtttccg--ttcaatacttgacactact |
310 |
Q |
| |
|
|||||||| ||||||||||| | |||||||||||| |||||||||||||||||||||||| | ||||||||||| ||| ||| |||||||| |||||| |
|
|
| T |
48013252 |
atcatatacaagataaactgctatcctcttcacaatgaaaccattctcaaaaacaacaaccacctccactttgttaccggattctatacttgatactact |
48013351 |
T |
 |
| Q |
311 |
ctct |
314 |
Q |
| |
|
|||| |
|
|
| T |
48013352 |
ctct |
48013355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 4132576 - 4132676
Alignment:
| Q |
171 |
atcttgtgcatgacactcctccactttttcagcaatcagtccatcatatataagataaactgttgtcctcttcacaacgaaaccattctcaaaaacaaca |
270 |
Q |
| |
|
||||||||||||||| | | ||| |||||| |||| || |||||||||| |||||||||| |||| || |||||| ||||| ||| ||||||||||| |
|
|
| T |
4132576 |
atcttgtgcatgacattgccccaaattttcaccaattggttcatcatatatgagataaactgctgtcttcatcacaatgaaactgttcccaaaaacaaca |
4132675 |
T |
 |
| Q |
271 |
a |
271 |
Q |
| |
|
| |
|
|
| T |
4132676 |
a |
4132676 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 286
Target Start/End: Original strand, 4122643 - 4122717
Alignment:
| Q |
212 |
catcatatataagataaactgttgtcctcttcacaacgaaaccattctcaaaaacaacaacaaaatccactttgt |
286 |
Q |
| |
|
|||||||||| |||||||||| |||| || |||||| ||||| || ||||||||||||||| |||||||||| |
|
|
| T |
4122643 |
catcatatatgagataaactgatgtcttcatcacaatgaaactgtttccaaaaacaacaacaatctccactttgt |
4122717 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 291
Target Start/End: Original strand, 7878 - 7955
Alignment:
| Q |
214 |
tcatatataagataaactgttgtcctcttcacaacgaaaccattctcaaaaacaacaacaaaatccactttgtttccg |
291 |
Q |
| |
|
|||||||||||||||| |||||| ||| ||| |||||| | | ||||||||||||||| ||||||||||||||| |
|
|
| T |
7878 |
tcatatataagataaattgttgtttctttcgcaatgaaaccgtccccaaaaacaacaacaacctccactttgtttccg |
7955 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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