View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7457_low_16 (Length: 321)
Name: NF7457_low_16
Description: NF7457
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7457_low_16 |
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Alignment Details
Target: chr4 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 11 - 304
Target Start/End: Complemental strand, 43589441 - 43589148
Alignment:
| Q |
11 |
agaatattttgggtacacacaattgaaattgacacatcacatgtgcacgtatacctgtctgtaaatagtaaaaaccatcaaaacaacagacttgttgtct |
110 |
Q |
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| T |
43589441 |
agaatattttgggtacacacaattgaaattgacacatcacatgtgcacgtatacttgtctgtaaatagtaaaaaccatcaaaacaacagacttgttgtct |
43589342 |
T |
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| Q |
111 |
ctcttgactatatataatacttaatgtgattaatgacacaagctataagtacattatagcaccacaccagtatgtaacgcaaaagatataattccctgca |
210 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
43589341 |
ctcttgactatatataatacttaatgtgattaatgacacaagctataagtacattatagcaccacaccagtatgtaacgcaaaagatataagtccctgca |
43589242 |
T |
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| Q |
211 |
ggacccattgttggcttttcataggtccacgaggacataaagaatttgatgaagggcataaataaatagagatatagcatataggacccctccc |
304 |
Q |
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| T |
43589241 |
ggacccattgttggcttttcataggtccacgaggacataaagaatttgatgaagggcataaataaatagagatatagcatataggacccctccc |
43589148 |
T |
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