View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7457_low_21 (Length: 259)
Name: NF7457_low_21
Description: NF7457
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7457_low_21 |
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Alignment Details
Target: chr8 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 9733752 - 9733608
Alignment:
| Q |
16 |
gacatcacctaaaggaaggaagtgaaaaacaactcttcaaaaagttggttttggttttgcagcttcaacaagtgaaatcaaatgagttaaacaaaaaagt |
115 |
Q |
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| T |
9733752 |
gacatcacctaaaggaaggaagagaaaaacaactcttcaaaaagttggttttggttttgcagcttcaacaagtgaaatcaaatgagttaaacaaaaaagt |
9733653 |
T |
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| Q |
116 |
gatctttgatttt----cattgtcactcaccaacaaacccaagac |
156 |
Q |
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| T |
9733652 |
gatctttgattttcattcattgtcactcaccaacaaacccaagac |
9733608 |
T |
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