View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7460_high_9 (Length: 250)
Name: NF7460_high_9
Description: NF7460
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7460_high_9 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 2360316 - 2360082
Alignment:
| Q |
16 |
atcgagttaaaccgttcaaatttgttcatatttggttaggacaatggatttcaagattcctattcggtcatccgcatgtcgaacatggctacataaatta |
115 |
Q |
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| T |
2360316 |
atcgagttaaaccgttcaaatttgttcatatttggttaggacaatggatttcaagattcctattcggtcatccgcatgtcgaacatggctacataaatta |
2360217 |
T |
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| Q |
116 |
attttctatccaaaagtaaacaatttatttcacttaaaaatagagtttatagtcaagtttgtctctaaaattgtaactacttgtcatattaatccttgac |
215 |
Q |
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| T |
2360216 |
attttctatccaaaagtaaacaatttatttcacttaaaaatagagtttatagtcaagtttgtctctaaaattgtaactacttgtcatattaatccttgac |
2360117 |
T |
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| Q |
216 |
ttttattatttcagaatttcaacttacgttaatca |
250 |
Q |
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||||||||||| ||||||||||||||||||||||| |
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| T |
2360116 |
ttttattatttaagaatttcaacttacgttaatca |
2360082 |
T |
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