View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7460_low_8 (Length: 313)
Name: NF7460_low_8
Description: NF7460
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7460_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 19 - 307
Target Start/End: Complemental strand, 41653468 - 41653180
Alignment:
| Q |
19 |
agccaatctacataaattaactttagagccaccaaagaatcatagaattcaacgcaaaaacatatacggaccacaagaaagtcaccaaaaacaatgcata |
118 |
Q |
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| T |
41653468 |
agccaatctacataaattaactttagagccgccaaagaatcatagaattcaacgcaaaaacatatacggaccacaagaaagtcaccaaaaacaatgcata |
41653369 |
T |
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| Q |
119 |
atttcacttacatttgcttatcaccaacaagatatccattcaacctctcaatagcagcatttgcagattcctctgtttcaaattgaacaaagccatatcc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41653368 |
atttcacttacatttgcttatcaccaacaagatatccattcaacctctcaatagcagcatttgcagattcctctgtttcaaattgaacaaagccatatcc |
41653269 |
T |
|
| Q |
219 |
tttactcttcccatcctcagacattacaactttacttgacaaaatattcccaaacttcttaaacatatcctctaatccagaataatcta |
307 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
41653268 |
tttactcttcccatcctcagacattacaactttacttgacaaaatattcccaaacttcttaaacatatcctctaatccagaattatcta |
41653180 |
T |
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