View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7461_1D_low_18 (Length: 245)
Name: NF7461_1D_low_18
Description: NF7461_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7461_1D_low_18 |
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Alignment Details
Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 45584141 - 45583951
Alignment:
| Q |
19 |
atgttgcaaaggaaaaaagaaacaagatttttggtttcatatttagtttcttttatcattcaactgaaaccgtgtcgtatcaacatcaacgacactgtcg |
118 |
Q |
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| T |
45584141 |
atgttgcaaaggaaaaaagaaacaagatttttggtttcatatttagtttcttttatcattcaactgaaaccgtgtcgtatcaacatcaacgacactgtcg |
45584042 |
T |
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| Q |
119 |
actgagtggtagtgaataagtctatattgaatgaatatatactatcaccatcaacgattgtaaggtatcagccattctgaaacatgatatg |
209 |
Q |
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| T |
45584041 |
actgagtggtagtgaataagtctatattgaatgaatatatactatcaccatcaacgattgtaaggtatcagccattctgaaacatgatatg |
45583951 |
T |
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