View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7461_2D_high_10 (Length: 275)
Name: NF7461_2D_high_10
Description: NF7461_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7461_2D_high_10 |
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Alignment Details
Target: chr1 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 6 - 257
Target Start/End: Complemental strand, 47128872 - 47128621
Alignment:
| Q |
6 |
gagatgaacagtttggtcatgtaaagttttcagactttctagcttattcactcaaatccgtcactcaggttttgcttccagagcttagatctctgtgtga |
105 |
Q |
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| T |
47128872 |
gagatgaacagtttggtcatgtaaagttttcagactttctagcttattcactcaaatccgtcactcaggttttgcttccagagcttagatctctgtgtga |
47128773 |
T |
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| Q |
106 |
caaaactattaatgagtttgatacttttcaagatgtacttgatatttatgaaggaagttttaacctcccaagtggacctttgcatagtaaaatcagagac |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
47128772 |
caaaactattaatgagtttgatacttttcaagatgtacttgatatttatgaaggaagttttaacctcccaagtggacctttgcatagtaaaattagagac |
47128673 |
T |
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| Q |
206 |
cttattccttatgagatttttagagaacttgttaggaatgatggtgagaaat |
257 |
Q |
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| T |
47128672 |
cttattccttatgagatttttagagaacttgttaggaatgatggtgagaaat |
47128621 |
T |
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