View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7461_2D_high_9 (Length: 287)
Name: NF7461_2D_high_9
Description: NF7461_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7461_2D_high_9 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 17 - 287
Target Start/End: Original strand, 45715166 - 45715436
Alignment:
| Q |
17 |
catcacagaacaattcccaagctcaggtggaatcacacctgaaaaccggtttgccgaaagcaaaagagaatcaatattactccacttcccaagccaagaa |
116 |
Q |
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| T |
45715166 |
catcacagaacaattcccaagctcaggtggaatcacacctgaaaaccggtttgccgaaagcaaaagagaatcaatattactccacttcccaagccaagaa |
45715265 |
T |
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| Q |
117 |
ggcaaaggaccatgaagaagattcttttcagctgaaaatgtcttaataggaagcatagaaagctcttgaggcaatgacccagataatgaattaaaggaaa |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
45715266 |
ggcaaaggaccatgaagaagattcttttcagctgaaaatgtcttaataggaagcatagaaagctcttgaggcaatgacccagataatgaattaaaagaaa |
45715365 |
T |
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| Q |
217 |
gcatcacattagtcaaatttgaacaatttccaagctcggatggaactgacccattaagctcagaaaaaaca |
287 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45715366 |
gcatcacattagtcaaatttgaacaatttccaagctcggatggaactgacccattaagctcagaaaaaaca |
45715436 |
T |
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