View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7461_2D_low_11 (Length: 422)

Name: NF7461_2D_low_11
Description: NF7461_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7461_2D_low_11
NF7461_2D_low_11
[»] chr6 (51 HSPs)
chr6 (23-405)||(8465781-8466148)
chr6 (1-217)||(12039773-12039989)
chr6 (1-217)||(13195175-13195391)
chr6 (1-217)||(15897765-15897981)
chr6 (1-217)||(9281800-9282016)
chr6 (1-223)||(14258756-14258978)
chr6 (5-217)||(20558154-20558365)
chr6 (1-217)||(20989856-20990072)
chr6 (1-217)||(25805305-25805521)
chr6 (1-217)||(33665645-33665861)
chr6 (5-217)||(25782662-25782875)
chr6 (1-217)||(17234443-17234659)
chr6 (1-217)||(17855046-17855262)
chr6 (1-155)||(20470294-20470448)
chr6 (39-217)||(25948380-25948558)
chr6 (1-217)||(17864516-17864719)
chr6 (3-162)||(23882787-23882945)
chr6 (1-155)||(29255007-29255160)
chr6 (1-135)||(21706441-21706575)
chr6 (1-132)||(17527976-17528107)
chr6 (1-165)||(26965662-26965826)
chr6 (67-223)||(21717702-21717858)
chr6 (67-223)||(21725538-21725694)
chr6 (36-118)||(17869944-17870026)
chr6 (36-118)||(17879696-17879778)
chr6 (2-82)||(12444812-12444891)
chr6 (1-81)||(24501812-24501892)
chr6 (46-118)||(12385261-12385333)
chr6 (14-78)||(30424926-30424990)
chr6 (1-72)||(20765085-20765156)
chr6 (1-78)||(18152797-18152874)
chr6 (2-89)||(15038328-15038414)
chr6 (1-88)||(16137673-16137759)
chr6 (1-103)||(34657243-34657344)
chr6 (1-110)||(9384572-9384681)
chr6 (4-114)||(20003092-20003201)
chr6 (144-217)||(19077416-19077489)
chr6 (1-105)||(15003254-15003357)
chr6 (2-88)||(19215935-19216019)
chr6 (1-118)||(28623480-28623596)
chr6 (144-222)||(34991217-34991295)
chr6 (1-61)||(21723500-21723560)
chr6 (177-217)||(13870563-13870603)
chr6 (4-88)||(15007431-15007513)
chr6 (1-81)||(16309449-16309527)
chr6 (178-217)||(19894781-19894820)
chr6 (321-403)||(8459794-8459876)
chr6 (1-37)||(13870457-13870493)
chr6 (1-41)||(25964722-25964762)
chr6 (1-41)||(25969369-25969409)
chr6 (1-41)||(25973809-25973849)
[»] chr7 (60 HSPs)
chr7 (1-217)||(16207972-16208188)
chr7 (1-217)||(4458591-4458807)
chr7 (1-217)||(11998731-11998947)
chr7 (1-217)||(16436626-16436842)
chr7 (1-155)||(20991455-20991610)
chr7 (1-217)||(11521501-11521716)
chr7 (1-217)||(644985-645201)
chr7 (1-217)||(13455203-13455418)
chr7 (46-217)||(12325677-12325848)
chr7 (1-217)||(11588316-11588532)
chr7 (1-217)||(29546228-29546436)
chr7 (1-162)||(10279722-10279882)
chr7 (1-110)||(26133005-26133114)
chr7 (1-135)||(14165100-14165233)
chr7 (1-118)||(24902059-24902174)
chr7 (1-81)||(10658371-10658451)
chr7 (1-120)||(14926596-14926715)
chr7 (1-120)||(15350062-15350181)
chr7 (1-79)||(7586621-7586698)
chr7 (1-79)||(23057196-23057274)
chr7 (1-81)||(21260503-21260583)
chr7 (1-81)||(42636235-42636315)
chr7 (4-80)||(31269148-31269224)
chr7 (3-78)||(7508426-7508501)
chr7 (3-78)||(14687358-14687433)
chr7 (4-79)||(20596918-20596993)
chr7 (1-78)||(10251431-10251508)
chr7 (1-82)||(23956864-23956945)
chr7 (1-88)||(48797709-48797795)
chr7 (15-109)||(11560610-11560703)
chr7 (45-99)||(20925232-20925286)
chr7 (1-70)||(9894157-9894226)
chr7 (1-82)||(14984659-14984739)
chr7 (1-82)||(15414270-15414350)
chr7 (1-78)||(23082864-23082941)
chr7 (1-78)||(23580044-23580121)
chr7 (1-88)||(3290775-3290861)
chr7 (4-71)||(10309583-10309650)
chr7 (1-79)||(11407040-11407118)
chr7 (1-70)||(23296499-23296571)
chr7 (1-78)||(6045312-6045388)
chr7 (1-78)||(42782747-42782823)
chr7 (3-79)||(20588800-20588875)
chr7 (1-88)||(7620062-7620148)
chr7 (1-82)||(9566893-9566972)
chr7 (1-78)||(10038819-10038902)
chr7 (1-45)||(15708195-15708239)
chr7 (6-78)||(19353122-19353193)
chr7 (1-80)||(23174971-23175050)
chr7 (1-88)||(30226066-30226153)
chr7 (1-52)||(4794680-4794730)
chr7 (13-88)||(11628621-11628695)
chr7 (1-52)||(15436065-15436116)
chr7 (13-79)||(2076496-2076561)
chr7 (13-79)||(2082915-2082980)
chr7 (1-82)||(9564244-9564323)
chr7 (1-42)||(24813952-24813993)
chr7 (91-183)||(10279621-10279712)
chr7 (1-52)||(15506284-15506335)
chr7 (15-88)||(4547851-4547923)
[»] chr1 (28 HSPs)
chr1 (1-217)||(11667953-11668168)
chr1 (1-214)||(4245890-4246103)
chr1 (1-217)||(26972491-26972706)
chr1 (1-220)||(1973163-1973381)
chr1 (1-217)||(13165249-13165462)
chr1 (1-208)||(14745873-14746080)
chr1 (13-159)||(20859645-20859791)
chr1 (1-115)||(17851463-17851577)
chr1 (1-159)||(20841355-20841513)
chr1 (1-126)||(23478025-23478151)
chr1 (1-78)||(17379713-17379790)
chr1 (1-78)||(17355921-17355998)
chr1 (96-217)||(9451993-9452113)
chr1 (6-79)||(18390200-18390273)
chr1 (1-118)||(41330892-41331009)
chr1 (1-82)||(15804201-15804282)
chr1 (1-81)||(12753049-12753129)
chr1 (3-118)||(10340249-10340364)
chr1 (1-83)||(33062372-33062453)
chr1 (1-78)||(51472183-51472260)
chr1 (1-52)||(17012019-17012070)
chr1 (1-78)||(8281911-8281988)
chr1 (1-110)||(17038207-17038314)
chr1 (2-88)||(40313315-40313400)
chr1 (2-52)||(45599421-45599471)
chr1 (36-79)||(18379856-18379899)
chr1 (13-79)||(8902055-8902121)
chr1 (183-217)||(20841526-20841560)
[»] chr8 (32 HSPs)
chr8 (17-223)||(11221374-11221580)
chr8 (4-217)||(23541505-23541719)
chr8 (4-217)||(45133516-45133729)
chr8 (1-217)||(33976910-33977126)
chr8 (1-217)||(24091824-24092025)
chr8 (2-211)||(33961619-33961828)
chr8 (1-217)||(25240257-25240473)
chr8 (63-217)||(27925576-27925730)
chr8 (38-123)||(22485089-22485174)
chr8 (55-217)||(22472634-22472798)
chr8 (1-81)||(20254974-20255054)
chr8 (1-80)||(1562458-1562537)
chr8 (1-78)||(12814683-12814760)
chr8 (2-79)||(12240228-12240305)
chr8 (1-66)||(24384564-24384629)
chr8 (1-81)||(9996487-9996567)
chr8 (1-80)||(12376962-12377039)
chr8 (1-88)||(23249716-23249802)
chr8 (1-52)||(39080982-39081033)
chr8 (2-52)||(8726861-8726911)
chr8 (4-82)||(17279876-17279953)
chr8 (1-59)||(22476240-22476298)
chr8 (1-103)||(33466251-33466352)
chr8 (1-110)||(24850523-24850632)
chr8 (3-53)||(13660464-13660514)
chr8 (3-53)||(13719107-13719157)
chr8 (4-88)||(17880833-17880917)
chr8 (1-41)||(22874206-22874246)
chr8 (1-52)||(37155617-37155668)
chr8 (1-78)||(18753875-18753952)
chr8 (170-217)||(22480973-22481020)
chr8 (220-277)||(32513492-32513549)
[»] chr3 (43 HSPs)
chr3 (1-217)||(295312-295528)
chr3 (4-222)||(44452327-44452545)
chr3 (1-194)||(28051011-28051204)
chr3 (1-217)||(15635964-15636180)
chr3 (1-217)||(20748255-20748469)
chr3 (1-217)||(13790531-13790747)
chr3 (1-217)||(19633739-19633954)
chr3 (1-215)||(19531974-19532188)
chr3 (1-217)||(18034986-18035203)
chr3 (1-135)||(17702340-17702474)
chr3 (13-217)||(1919339-1919542)
chr3 (1-217)||(18064296-18064515)
chr3 (1-134)||(24195459-24195591)
chr3 (1-124)||(18547593-18547716)
chr3 (14-154)||(23954661-23954802)
chr3 (1-155)||(13524772-13524925)
chr3 (1-82)||(15686248-15686329)
chr3 (1-81)||(6580957-6581037)
chr3 (3-80)||(14406722-14406799)
chr3 (1-81)||(17042844-17042924)
chr3 (1-88)||(9031472-9031558)
chr3 (1-79)||(980455-980533)
chr3 (1-70)||(3552304-3552373)
chr3 (1-70)||(31649690-31649758)
chr3 (6-82)||(11558414-11558489)
chr3 (6-82)||(11567683-11567758)
chr3 (1-83)||(286983-287065)
chr3 (39-135)||(17140434-17140531)
chr3 (2-49)||(8749059-8749106)
chr3 (1-88)||(9036689-9036775)
chr3 (1-122)||(7479228-7479347)
chr3 (1-57)||(8224850-8224907)
chr3 (1-122)||(13913739-13913858)
chr3 (1-62)||(21719016-21719076)
chr3 (1-79)||(21094792-21094866)
chr3 (178-217)||(17702259-17702298)
chr3 (48-82)||(15686417-15686451)
chr3 (3-80)||(3445098-3445174)
chr3 (1-41)||(18476957-18476997)
chr3 (1-88)||(12054539-12054624)
chr3 (1-82)||(13917831-13917910)
chr3 (17-80)||(10082380-10082443)
chr3 (1-81)||(11656010-11656089)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-217)||(26256-26472)
[»] chr4 (34 HSPs)
chr4 (1-217)||(10190738-10190954)
chr4 (1-217)||(10724111-10724327)
chr4 (1-217)||(10937880-10938096)
chr4 (1-217)||(25116675-25116893)
chr4 (1-217)||(16383741-16383958)
chr4 (60-217)||(8163634-8163791)
chr4 (1-217)||(15162579-15162795)
chr4 (1-217)||(21477960-21478175)
chr4 (1-217)||(15700402-15700604)
chr4 (1-114)||(28019259-28019372)
chr4 (1-110)||(33899080-33899189)
chr4 (1-217)||(18618208-18618422)
chr4 (1-132)||(23400286-23400412)
chr4 (1-83)||(13399395-13399477)
chr4 (1-81)||(9068933-9069013)
chr4 (2-79)||(33737973-33738050)
chr4 (1-81)||(33745951-33746031)
chr4 (1-79)||(2679839-2679917)
chr4 (1-79)||(32861637-32861715)
chr4 (2-82)||(41785421-41785501)
chr4 (1-80)||(50907840-50907919)
chr4 (1-75)||(19659432-19659506)
chr4 (1-78)||(10198342-10198418)
chr4 (4-89)||(25354730-25354814)
chr4 (2-88)||(23541225-23541310)
chr4 (1-89)||(22554950-22555037)
chr4 (1-88)||(46741841-46741927)
chr4 (2-82)||(24143122-24143201)
chr4 (1-52)||(11325237-11325288)
chr4 (33-79)||(26244988-26245034)
chr4 (1-78)||(16655430-16655507)
chr4 (13-80)||(13268835-13268902)
chr4 (169-217)||(13399576-13399624)
chr4 (177-217)||(33899450-33899490)
[»] scaffold0226 (3 HSPs)
scaffold0226 (1-222)||(18217-18437)
scaffold0226 (1-222)||(27611-27831)
scaffold0226 (1-217)||(7631-7847)
[»] scaffold0103 (1 HSPs)
scaffold0103 (1-217)||(25765-25981)
[»] chr5 (27 HSPs)
chr5 (1-217)||(13735065-13735281)
chr5 (1-217)||(30605782-30605995)
chr5 (1-202)||(26036677-26036878)
chr5 (1-217)||(22404853-22405069)
chr5 (1-223)||(9422559-9422781)
chr5 (1-127)||(23420653-23420779)
chr5 (1-217)||(25105512-25105729)
chr5 (1-217)||(25164605-25164822)
chr5 (1-217)||(26329305-26329521)
chr5 (1-223)||(18220971-18221178)
chr5 (3-123)||(24189808-24189928)
chr5 (3-100)||(23623846-23623943)
chr5 (1-118)||(13338543-13338659)
chr5 (1-134)||(20845886-20846018)
chr5 (1-83)||(20714828-20714910)
chr5 (1-78)||(13942089-13942166)
chr5 (1-82)||(17661502-17661583)
chr5 (1-78)||(24117586-24117663)
chr5 (1-89)||(7898006-7898093)
chr5 (2-88)||(17920876-17920961)
chr5 (1-78)||(22979736-22979812)
chr5 (1-82)||(26183326-26183406)
chr5 (1-52)||(20741028-20741079)
chr5 (13-79)||(11204712-11204777)
chr5 (1-82)||(22130926-22131005)
chr5 (1-89)||(20498245-20498332)
chr5 (14-118)||(22184702-22184805)
[»] chr2 (26 HSPs)
chr2 (1-217)||(12910341-12910557)
chr2 (1-217)||(23758477-23758693)
chr2 (1-134)||(36398886-36399019)
chr2 (1-154)||(24790250-24790403)
chr2 (1-217)||(22610744-22610960)
chr2 (15-119)||(21250302-21250407)
chr2 (1-83)||(19466614-19466696)
chr2 (1-79)||(12952462-12952540)
chr2 (1-78)||(31587467-31587543)
chr2 (1-80)||(24317901-24317981)
chr2 (1-80)||(20649648-20649727)
chr2 (4-122)||(21530331-21530450)
chr2 (1-83)||(18765662-18765743)
chr2 (1-118)||(22582363-22582481)
chr2 (1-78)||(27111071-27111147)
chr2 (1-69)||(24283620-24283688)
chr2 (1-63)||(25347199-25347261)
chr2 (1-63)||(19198370-19198431)
chr2 (1-80)||(24317280-24317361)
chr2 (1-45)||(26860388-26860432)
chr2 (1-105)||(29565977-29566079)
chr2 (1-80)||(20475367-20475446)
chr2 (13-72)||(23801910-23801969)
chr2 (1-51)||(15328326-15328376)
chr2 (1-105)||(13315057-13315161)
chr2 (1-53)||(20476668-20476720)
[»] scaffold0259 (1 HSPs)
scaffold0259 (1-217)||(17369-17585)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-220)||(87585-87803)
[»] scaffold0059 (2 HSPs)
scaffold0059 (1-217)||(50183-50400)
scaffold0059 (4-217)||(61568-61781)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-209)||(110348-110557)
[»] scaffold0185 (1 HSPs)
scaffold0185 (1-222)||(2450-2671)
[»] scaffold0190 (1 HSPs)
scaffold0190 (1-217)||(16716-16932)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-217)||(36857-37073)
[»] scaffold0338 (1 HSPs)
scaffold0338 (1-217)||(16305-16521)
[»] scaffold0333 (1 HSPs)
scaffold0333 (1-217)||(5496-5713)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-162)||(40240-40402)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-63)||(36598-36660)
[»] scaffold0022 (1 HSPs)
scaffold0022 (4-81)||(3111-3187)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-78)||(202386-202463)
[»] scaffold0505 (1 HSPs)
scaffold0505 (1-78)||(10127-10204)
[»] scaffold0423 (1 HSPs)
scaffold0423 (4-80)||(13596-13672)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-88)||(53017-53102)
[»] scaffold0143 (1 HSPs)
scaffold0143 (1-103)||(36264-36365)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-83)||(103092-103173)
[»] scaffold0520 (1 HSPs)
scaffold0520 (1-78)||(5409-5486)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-78)||(37357-37433)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-83)||(17064-17145)
[»] scaffold0072 (1 HSPs)
scaffold0072 (13-79)||(18540-18605)


Alignment Details
Target: chr6 (Bit Score: 253; Significance: 1e-140; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 23 - 405
Target Start/End: Original strand, 8465781 - 8466148
Alignment:
Q  23 ttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttt 122  Q
    ||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8465781 ttcctggcttggcagcccccagagtaggtgtgtttgtcaccgaaatgggtcaacaaactcattgtgttctttactttcctgtcatttactttcttgtttt 8465880  T
Q  123 tatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaattacaga 222  Q
    |||||  ||||||||||||| ||||||||||||||||||| ||||  ||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  8465881 tatttcagtttatttcgtgatgttggaacattgaacggaacattgcaaacgttaaaacatcatatagaacatattaaaacaagtgcgctagaattacaga 8465980  T
Q  223 tcgggctttggtcgcatcttgcgcaacaacaatgacgacatgttacttgggttcttcggctcactaattccttatgtgtcgaatgccgctgaattaattg 322  Q
    ||||||||||||||||| |  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |      
T  8465981 tcgggctttggtcgcatgtctcgcaacaacaatgacgacttgttacttgggttcttcggctcactaattccttatgtgccgaataccgctgaattact-- 8466078  T
Q  323 caattttaaatggtctcaagattgctcaatctgaaagattcaggaatattatcattaaattagcttccactctaacagttgat 405  Q
                 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8466079 -------------tctcaagattgctcaatctgaaagattcaggaatattatcattaaattagattccactctaacagttgat 8466148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 12039773 - 12039989
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| |  |||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||    
T  12039773 aggactacactagaagatttccttcctagcttggtagcccccaaagtaggtgtgttcgtcaccgaactaggtcaacaaactcattgtgttctttactttc 12039872  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
     |||| |||| |||||||||||||||| ||||||| ||||||  ||||||||||||||| || ||||  |||||||||||||| |  | |||||||||||    
T  12039873 ttgtcgtttattttcttgtttttatttctgtttatctcgtgatattggaacattgaacgaaacattgcaaacgttaaaacatcgtgtagaacatattaaa 12039972  T
Q  201 acaagtgcgctagaatt 217  Q
    ||||||| |||||||||    
T  12039973 acaagtgtgctagaatt 12039989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 13195391 - 13195175
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||| | ||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||    
T  13195391 aggactacactagtggatttccttcatggcttggtagcccctagagtaggtgtgtttgtcatcgaactaggtcaacaaactcattgtgttctttactttc 13195292  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    |||||||||| ||||||||||||||||||||||||| ||||| |||| |||||| |  | || ||||  |||| |||||||||||||  |||||||||||    
T  13195291 ctgtcatttattttcttgtttttatttatgtttattgcgtgatgttgaaacattaattgtaacattgcaaacgctaaaacatcataccaaacatattaaa 13195192  T
Q  201 acaagtgcgctagaatt 217  Q
    ||| ||| |||||||||    
T  13195191 acacgtgtgctagaatt 13195175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 15897765 - 15897981
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  15897765 aggactacactagtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattttgttctttactttc 15897864  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
     |||| |||| |||||| |||||| || |||||||  ||||| |||| ||| ||||||  || ||||   ||||||||||||| ||||||||||||||||    
T  15897865 ttgtcttttattttcttatttttacttctgtttatcgcgtgatgttgaaaccttgaacaaaacattgcatacgttaaaacatcgtacataacatattaaa 15897964  T
Q  201 acaagtgcgctagaatt 217  Q
    ||||||| | |||||||    
T  15897965 acaagtgtgttagaatt 15897981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 9281800 - 9282016
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| || ||||     
T  9281800 aggactacactagtggatttccttccaggcttggtagcccccagagtaggtgtgtttgtcaccgaactagatcaacaaactcattgtgttcattactttt 9281899  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    ||||| |||| ||  |||||||||||| |||||||  | ||| |||||||||||||||  || ||||  ||| ||||||||||||||||||| |||||||    
T  9281900 ctgtcttttatttaattgtttttatttctgtttatcgcttgatgttggaacattgaacttaacattgaaaactttaaaacatcatacataacgtattaaa 9281999  T
Q  201 acaagtgcgctagaatt 217  Q
    |||||||||||||||||    
T  9282000 acaagtgcgctagaatt 9282016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 14258978 - 14258756
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  14258978 aggactacactagtggatttccttcctcgcttggtagcccccaaagtaggtgtgtttctcaccgaactgggtcaacaaactcattgtgttctttactttc 14258879  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    || |  |||| |||||||||||||||| || ||||  ||||| |||| |||||| | || || ||||  ||||||||||||||||| | |||||||||||    
T  14258878 ctattgtttattttcttgtttttatttctgcttatcgcgtgatgttgaaacattaatcgtaacattgcaaacgttaaaacatcataaaaaacatattaaa 14258779  T
Q  201 acaagtgcgctagaattacagat 223  Q
    ||||||||| || |||| |||||    
T  14258778 acaagtgcgttaaaatttcagat 14258756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 5 - 217
Target Start/End: Complemental strand, 20558365 - 20558154
Alignment:
Q  5 ctacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgt 104  Q
    ||||||| ||||||||||||||| ||||||||||| ||||| ||||||   ||| ||||||||||||| |||||||||| |||||||||| ||||| |||    
T  20558365 ctacactagtggatttccttcctggcttggtagcctccagactaggtgacgttg-caccgaactgggttaacaaactcactgtgttctttactttcttgt 20558267  T
Q  105 catttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaa 204  Q
    |||||| |||||||||||||||| |||||||  ||||| |||||||||||||||| || || |  |||||||||||||||||||||||||||||||||||    
T  20558266 catttattttcttgtttttatttctgtttatcgcgtgatgttggaacattgaacgtaacatcgcaaacgttaaaacatcatacataacatattaaaacaa 20558167  T
Q  205 gtgcgctagaatt 217  Q
    ||||||| |||||    
T  20558166 gtgcgctcgaatt 20558154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 20989856 - 20990072
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| |||||||||||| ||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||    
T  20989856 aggactacactagtggatttcctttctgacttggtagcccccagagtaggtgtgtctgtcaccgaactgggtcaacaaactcattgtgttatttactttc 20989955  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    |  ||||||| |||||||||||||||| |  ||||   |||| ||||||||||||| ||||| ||||  || | |||||||||||||| |||||||||||    
T  20989956 ccatcatttattttcttgtttttatttctacttatcgtgtgatgttggaacattgatcggaacattgcaaatgctaaaacatcatacagaacatattaaa 20990055  T
Q  201 acaagtgcgctagaatt 217  Q
    ||||||| |||||||||    
T  20990056 acaagtgagctagaatt 20990072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 25805521 - 25805305
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| ||||||||||| | ||||||||||||||||||||||| |||| | |||||| |||||||||||||| |||||    
T  25805521 aggactacactagtggatttccttcctggcttggtagcctctagagtaggtgtgtttgtcaccgatctggtttaacaaaatcattgtgttctttactttc 25805422  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    ||||||||||||||||||||||||||| | |||||   | || |||| ||||||||||| || ||| | |||| | |||||||||||| |||||||||||    
T  25805421 ctgtcatttactttcttgtttttatttctttttatcaagcgatgttgaaacattgaacgaaacattataaacgcttaaacatcatacagaacatattaaa 25805322  T
Q  201 acaagtgcgctagaatt 217  Q
    ||||||||| |||||||    
T  25805321 acaagtgcgatagaatt 25805305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 33665861 - 33665645
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||    
T  33665861 aggactacactagtggatttccttcctggcttagtagcccccagagtaggtgtgtttgtcaccgaactaggtcaacaaactcattgtgttatttactttc 33665762  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    || ||||||| |||||||||||||||| |||||||   |||| |||  |||||| | || || ||||  |||     ||||||||||| |||||||||||    
T  33665761 ctatcatttattttcttgtttttatttctgtttatcgtgtgatgttaaaacattaatcgtaacattgcaaacaccgtaacatcatacagaacatattaaa 33665662  T
Q  201 acaagtgcgctagaatt 217  Q
    |||||||||||||||||    
T  33665661 acaagtgcgctagaatt 33665645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 5 - 217
Target Start/End: Complemental strand, 25782875 - 25782662
Alignment:
Q  5 ctacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattg-tgttcttttctttcctg 103  Q
    ||||||| |||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||| || |||||||   |||||||    
T  25782875 ctacactagtggatttccttactggcttggtagcctccagagtaggtgtgtttgtcaccgaactgggttaacaaactcactgttgttcttaaatttcctg 25782776  T
Q  104 tcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaaca 203  Q
    |||||||||||||||||||||||| ||||||| ||| || |||| | ||||||| | || |||   || | | ||||||| |||||||||||||||||||    
T  25782775 tcatttactttcttgtttttatttctgtttatctcgcgatgttgaagcattgaatgaaacattacaaatgcttaaacatcgtacataacatattaaaaca 25782676  T
Q  204 agtgcgctagaatt 217  Q
    ||||||||||||||    
T  25782675 agtgcgctagaatt 25782662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 17234659 - 17234443
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| |||||||||||||   ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  17234659 aggactacactggtggatttccttctgggcttggtagcccctagagtaggtgtgtttgtcaccaaactgggtcaacaaactcattgtgttctttactttc 17234560  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    |||||||||| |||||| ||||||||| | |||||  ||||| |||| || ||| | || || ||||  || |   ||||||||||||||| ||||||||    
T  17234559 ctgtcatttattttcttatttttatttctatttatcacgtgatgttgaaatattaatcgtaacattgcaaatgccgaaacatcatacataatatattaaa 17234460  T
Q  201 acaagtgcgctagaatt 217  Q
    ||||||| |||||||||    
T  17234459 acaagtgtgctagaatt 17234443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 17855262 - 17855046
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| ||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||    
T  17855262 aggactacactagtggatttccttcctggcttgatagcctccagagtaggtgtgtttgtcaccgatctgggtcaacaaactcattgcgttctttactttc 17855163  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    ||||| |||| ||||||||||||| || | |||||   |||| |||| |||||| | || || || |  ||  ||||||||||||||| ||| |||||||    
T  17855162 ctgtcttttattttcttgtttttaattctatttatcgtgtgatgttgaaacattaatcgtaacatcgcaaatattaaaacatcatacaaaacgtattaaa 17855063  T
Q  201 acaagtgcgctagaatt 217  Q
    ||||||| |||||||||    
T  17855062 acaagtgtgctagaatt 17855046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 20470294 - 20470448
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    |||| |||||| ||||||||||||||| ||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||||| |||||    
T  20470294 aggagtacactagtggatttccttcctggcttggtagcctccagagtaggtgtgattgtcgccgaactgggtcaacaaactcattatgttctttactttc 20470393  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattg 155  Q
    |||||||||| ||||||||||| | || | |||||||||||| ||||||||||||    
T  20470394 ctgtcatttattttcttgttttaaattctatttatttcgtgatgttggaacattg 20470448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 39 - 217
Target Start/End: Complemental strand, 25948558 - 25948380
Alignment:
Q  39 ccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttc 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||  |    
T  25948558 ccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcctgtcatttattttcttgtttttatttctgtttatcgc 25948459  T
Q  139 gtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 217  Q
    |||| |||| |||||| | || |  ||||  |||| | ||||| |||||||||  |||||||||||||| |||||||||    
T  25948458 gtgatgttgaaacattaatcgtatcattgcaaacgctgaaacaacatacataatgtattaaaacaagtgtgctagaatt 25948380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 17864516 - 17864719
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| |||||||| |||||| | |||||| ||||||||||||||||||||||||||||||| |||||||||||| | |||||||             
T  17864516 aggactacactagtggattttcttcctggattggtaacccccagagtaggtgtgtttgtcaccgaactaggtcaacaaacttactgtgttc--------- 17864606  T
Q  101 ctgtcatttactttcttgttttt-atttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaa 199  Q
         || ||||||||||||||| |||| | |||||||||||| |||| |||||||||||| | ||||| |||||| ||||||| |||||||||||||||    
T  17864607 -----atctactttcttgttttttatttctatttatttcgtgatgttgcaacattgaacggtacattgtaaacgttgaaacatcttacataacatattaa 17864701  T
Q  200 aacaagtgcgctagaatt 217  Q
    ||||||||||||||||||    
T  17864702 aacaagtgcgctagaatt 17864719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 23882787 - 23882945
Alignment:
Q  3 gactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcct 102  Q
    ||||||||| |||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  23882787 gactacactagtggatttccttcctgatttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcgt 23882886  T
Q  103 gtcatttactttcttg-tttttatttatgtttatttcgtgacgttggaacattgaacggaa 162  Q
    |||||||| |||| || ||||||||  |||||| | | ||| ||||||||||| |||||||    
T  23882887 gtcatttattttcatgctttttatt--tgtttactgcatgatgttggaacattaaacggaa 23882945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 29255007 - 29255160
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| |||||||| |||||| ||||| ||||||  |||||||||||||||| ||| ||||||||||||||||||||  ||||||||| |||||    
T  29255007 aggactacactagtggattttcttcctggcttgatagccct-agagtaggtgtgtttgccactgaactgggtcaacaaactcaccgtgttctttactttc 29255105  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattg 155  Q
     ||||||||||||||||||||||||||  ||||| ||||||| ||||||||||||    
T  29255106 ttgtcatttactttcttgtttttatttgagtttaattcgtgatgttggaacattg 29255160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 21706441 - 21706575
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccaga-gtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttcttt 99  Q
    ||||||||||| |||||||| |||||||||| || ||||||| || |||||||||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  21706441 aggactacactagtggattttcttcctagctagg-agcccccggacgtaggtgtgtttgtcaccaaactgggttaacaaactcattgtgttctttacttt 21706539  T
Q  100 cctgtcatttactttcttgtttttatttatgtttat 135  Q
    ||||||  ||| ||||||||||||||||||||||||    
T  21706540 cctgtcgattattttcttgtttttatttatgtttat 21706575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 17527976 - 17528107
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| |||||||  ||| || ||||||||||||| | |||||||||||||||||| ||||||||| |||||||||| |||||||||| |||||    
T  17527976 aggactacactagtggattaactttctggcttggtagccccaatagtaggtgtgtttgtcactgaactgggttaacaaactcactgtgttctttactttc 17528075  T
Q  101 ctgtcatttactttcttgtttttatttatgtt 132  Q
    ||||| |||| |||||||||||||||| ||||    
T  17528076 ctgtcttttattttcttgtttttatttctgtt 17528107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 26965662 - 26965826
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| |||||||||||||||  |||| ||||| |||||||||||||||||||||||||||||||||||||||||  |||||   ||| |||||    
T  26965662 aggactacactagtggatttccttcctgacttgatagcctccagagtaggtgtgtttgtcaccgaactgggtcaacaaactgtttgtgccttttactttc 26965761  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatt-tcgtgacgttggaacattgaacggaatat 165  Q
     ||||||||| |||||||   | |||||||||| || || ||| ||| ||||||||||||||||||    
T  26965762 ttgtcatttattttcttg-cataatttatgtttgttatcatgatgttagaacattgaacggaatat 26965826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 67 - 223
Target Start/End: Original strand, 21717702 - 21717858
Alignment:
Q  67 ctgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatatt 166  Q
    |||||||||||||||||||||||||||| |||||| ||| |||| ||||||| |||||||| |||||||  ||||| ||||||||||| ||||||| |||    
T  21717702 ctgggtcaacaaactcattgtgttctttactttccagtcgtttattttcttgattttatttctgtttatcacgtgatgttggaacattaaacggaacatt 21717801  T
Q  167 gttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaattacagat 223  Q
    |  ||| ||||||||||  ||| ||  || |||||||||  |||||||||| |||||    
T  21717802 gcaaacattaaaacatctgacagaatttaataaaacaagaacgctagaatttcagat 21717858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 67 - 223
Target Start/End: Original strand, 21725538 - 21725694
Alignment:
Q  67 ctgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatatt 166  Q
    |||||||||||||||||||||||||||| |||||| ||| |||| ||||||| |||||||| |||||||  ||||| ||||||||||| ||||||| |||    
T  21725538 ctgggtcaacaaactcattgtgttctttactttccagtcgtttattttcttgattttatttctgtttatcacgtgatgttggaacattaaacggaacatt 21725637  T
Q  167 gttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaattacagat 223  Q
    |  ||| ||||||||||  ||| ||  || |||||||||  |||||||||| |||||    
T  21725638 gcaaacattaaaacatctgacagaatttaataaaacaagaacgctagaatttcagat 21725694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 17869944 - 17870026
Alignment:
Q  36 agcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttg 118  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||| ||||||||| |||||||    
T  17869944 agcccctagagtaggtgtgtttgtcaccgaactgggtcaacaaactcactgtgtcctttactttcttgtcatttattttcttg 17870026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 17879696 - 17879778
Alignment:
Q  36 agcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttg 118  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||| ||||||||| |||||||    
T  17879696 agcccctagagtaggtgtgtttgtcaccgaactgggtcaacaaactcactgtgtcctttactttcttgtcatttattttcttg 17879778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 12444812 - 12444891
Alignment:
Q  2 ggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 82  Q
    |||||||||| ||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||    
T  12444812 ggactacactagtggagttccttcctagcttggtagcctccagagtaggtgtg-ttgtcaccgaactgggttaacaaactc 12444891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 24501892 - 24501812
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 81  Q
    ||||||||||| |||||||||||| || ||||||||||| | |||||||||||||||||||||||||||||| ||||||||    
T  24501892 aggactacactagtggatttcctttctggcttggtagcctctagagtaggtgtgtttgtcaccgaactgggttaacaaact 24501812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 12385261 - 12385333
Alignment:
Q  46 gtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttg 118  Q
    |||||||||||||||| ||||||||| ||||||||||| |||||||||| ||||| ||||||||| |||||||    
T  12385261 gtaggtgtgtttgtcatcgaactgggccaacaaactcactgtgttctttactttcttgtcatttattttcttg 12385333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 30424990 - 30424926
Alignment:
Q  14 tggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    |||||||||||| | ||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  30424990 tggatttccttcttggcttggtagcccctagagtaggtgtgtttgtcaccgaactggttcaacaa 30424926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 20765085 - 20765156
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggt 72  Q
    ||||||||||| ||||| || |||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  20765085 aggactacactagtggactttcttcctggcttggtcgcccccagagtaagtgtgtttgtcaccgaactgggt 20765156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 18152797 - 18152874
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    |||||||| || |||||||||||||||  |||||||||| ||| |||||||||||||||||| ||||||||| |||||    
T  18152797 aggactacgctagtggatttccttcctgccttggtagcctccatagtaggtgtgtttgtcactgaactgggttaacaa 18152874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 15038414 - 15038328
Alignment:
Q  2 ggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgt 89  Q
    |||||||||| |||||||||||||||  |||||||||||||||||||||||   ||| |||| |||||||| |||||||||| |||||    
T  15038414 ggactacactagtggatttccttcctgacttggtagcccccagagtaggtgacgttg-caccaaactgggttaacaaactcactgtgt 15038328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 16137673 - 16137759
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtg 88  Q
    ||||||||||| ||||||||||||||| |||||||||||| |||||||||||   ||| || | |||||||| |||||||||||||||    
T  16137673 aggactacactagtggatttccttcctggcttggtagccctcagagtaggtgacgttg-catcaaactgggttaacaaactcattgtg 16137759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 34657243 - 34657344
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccaga-gtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttcttt 99  Q
    ||||||||||| ||||||||||||| | ||||||||||||| ||| ||||||| | ||||  ||||||||||| |||||||||  |||||||||| ||||    
T  34657243 aggactacactagtggatttccttcttggcttggtagcccctagatgtaggtgag-ttgt-gccgaactgggttaacaaactctctgtgttctttacttt 34657340  T
Q  100 cctg 103  Q
    ||||    
T  34657341 cctg 34657344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9384681 - 9384572
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtg-ttcttttcttt 99  Q
    ||||||||||| |||||||||||||||  |||||||||| ||||| |||| |   |||| |||||||||||| |||||||||| ||||    ||||||||    
T  9384681 aggactacactagtggatttccttcctgacttggtagccaccagaataggcgacgttgt-accgaactgggttaacaaactcactgtgccatttttcttt 9384583  T
Q  100 cctgtcattta 110  Q
    |||||||||||    
T  9384582 cctgtcattta 9384572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 20003201 - 20003092
Alignment:
Q  4 actacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctg 103  Q
    |||||||| || |||||||||||| ||||||||||||| | ||||||||   ||| |||||||||||||  ||||||||||||||   ||||||||| ||    
T  20003201 actacactagttgatttccttcctggcttggtagcccctaaagtaggtgacgttg-caccgaactgggttcacaaactcattgtgccattttctttcatg 20003103  T
Q  104 tcatttacttt 114  Q
    ||  |||||||    
T  20003102 tctgttacttt 20003092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 19077489 - 19077416
Alignment:
Q  144 gttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 217  Q
    ||||||||||||| || || ||||  || ||||||| |||||||| ||||||||||||||||||| ||||||||    
T  19077489 gttggaacattgatcgtaacattgcaaatgttaaaatatcatacagaacatattaaaacaagtgcactagaatt 19077416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 15003254 - 15003357
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||| | |||||||| || ||||||||||||   ||| ||||||||||||| ||| |||||| ||||   |||||||||    
T  15003254 aggactacactagtggatttccttcatggcttggtatccaccagagtaggtgacattg-caccgaactgggttaacgaactcactgtgccattttctttc 15003352  T
Q  101 ctgtc 105  Q
     ||||    
T  15003353 ttgtc 15003357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 19216019 - 19215935
Alignment:
Q  2 ggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtg 88  Q
    |||||||||| ||||||||||||||| ||||||||  ||| ||||||||||   ||| ||||||||||||| |||||||||| ||||    
T  19216019 ggactacactagtggatttccttcctggcttggta-tccctagagtaggtgacgttg-caccgaactgggttaacaaactcaatgtg 19215935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 28623596 - 28623480
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccaga-gtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttcttt 99  Q
    ||||||||||| ||  ||||||||||| ||||||||||||| ||| ||||||| | ||||  ||||||||||| |||||||||  | ||   ||| ||||    
T  28623596 aggactacactagtttatttccttcctggcttggtagcccctagatgtaggtgag-ttgt-gccgaactgggttaacaaactctctctgccttttacttt 28623499  T
Q  100 cctgtcatttactttcttg 118  Q
    |||||||||||||||||||    
T  28623498 cctgtcatttactttcttg 28623480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 34991217 - 34991295
Alignment:
Q  144 gttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaattacaga 222  Q
    ||||||||||| ||||||| ||||   ||||||||||||   ||| |||||||||||| ||||||||||||||| ||||    
T  34991217 gttggaacattaaacggaacattgcagacgttaaaacatatgacagaacatattaaaataagtgcgctagaatttcaga 34991295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21723500 - 21723560
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccaga-gtaggtgtgtttgtca 61  Q
    ||||||||||| ||||||||||||||| |||||| |||||||||| |||||||| |||||||    
T  21723500 aggactacactagtggatttccttcctggcttgg-agcccccagacgtaggtgtatttgtca 21723560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 13870563 - 13870603
Alignment:
Q  177 aaacatcatacataacatattaaaacaagtgcgctagaatt 217  Q
    ||||||||| || ||||||||||||||||||||||||||||    
T  13870563 aaacatcattcagaacatattaaaacaagtgcgctagaatt 13870603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 15007431 - 15007513
Alignment:
Q  4 actacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtg 88  Q
    |||||||| ||||||||||||| | ||||||||  ||||||||||||||  |||| || |||||||||| |||||||||| ||||    
T  15007431 actacactagtggatttccttcatggcttggta-tccccagagtaggtgactttg-catcgaactgggttaacaaactcactgtg 15007513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 16309449 - 16309527
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 81  Q
    ||||||| ||| ||||||||||| ||| ||||||||||||||||||||||||   ||| ||| ||||||||| ||||||||    
T  16309449 aggactatactagtggatttcct-cctggcttggtagcccccagagtaggtgacgttg-cactgaactgggttaacaaact 16309527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 19894781 - 19894820
Alignment:
Q  178 aacatcatacataacatattaaaacaagtgcgctagaatt 217  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  19894781 aacatcatacagaacatattaaaacaagtgtgctagaatt 19894820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 403
Target Start/End: Original strand, 8459794 - 8459876
Alignment:
Q  321 tgcaattttaaatggtctcaagattgctcaatctgaaagattcaggaatattatcattaaattagcttccactctaacagttg 403  Q
    ||||||||||||||||||||| ||||||||| ||  |  ||| || ||||||||| || ||| || || ||||||||||||||    
T  8459794 tgcaattttaaatggtctcaaaattgctcaaactagacaattgagaaatattatcgttgaataagatttcactctaacagttg 8459876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 13870457 - 13870493
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtag 37  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  13870457 aggactacactagtggatttccttcctggcttggtag 13870493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25964762 - 25964722
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccc 41  Q
    |||||||| || ||||||||||||||| |||||||||||||    
T  25964762 aggactaccctagtggatttccttcctggcttggtagcccc 25964722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25969409 - 25969369
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccc 41  Q
    |||||||| || ||||||||||||||| |||||||||||||    
T  25969409 aggactaccctagtggatttccttcctggcttggtagcccc 25969369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25973849 - 25973809
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccc 41  Q
    |||||||| || ||||||||||||||| |||||||||||||    
T  25973849 aggactaccctagtggatttccttcctggcttggtagcccc 25973809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 145; Significance: 3e-76; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 16207972 - 16208188
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||| |||||    
T  16207972 aggactacactagtggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcgccgaaatgggtcaacaaactcattgtcttctttactttc 16208071  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    || ||||||| ||| ||||||||||||||||||||| ||||| |||||||||||||||| || |||   || ||||||||||||||||||||||||||||    
T  16208072 ctatcatttattttattgtttttatttatgtttattgcgtgatgttggaacattgaacgaaacattacaaatgttaaaacatcatacataacatattaaa 16208171  T
Q  201 acaagtgcgctagaatt 217  Q
    ||||||| |||||||||    
T  16208172 acaagtgtgctagaatt 16208188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 4458807 - 4458591
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||| |||||    
T  4458807 aggactacactagtagatttccttcctggcttggtagcccccagagtaggtgtgtttgtcaccgaactcggtcaacaaattcactgtgttctttactttc 4458708  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    |||||||||| |||||||||||||||| ||||| || || || ||||||||||| ||||||| ||||  ||||||||||||||  ||| |||||||||||    
T  4458707 ctgtcatttattttcttgtttttatttctgtttgttacgcgatgttggaacattaaacggaacattgcaaacgttaaaacatctgacagaacatattaaa 4458608  T
Q  201 acaagtgcgctagaatt 217  Q
    ||||||||||| |||||    
T  4458607 acaagtgcgctcgaatt 4458591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 11998947 - 11998731
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccaga-gtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttcttt 99  Q
    ||||||||||| ||||||||||||||| |||||| ||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  11998947 aggactacactagtggatttccttcctggcttgg-agcccccggacgtaggtgtgtttgtcatcgaactgggtcaacaaactcattgtgttctttacttt 11998849  T
Q  100 cctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaa 199  Q
    |||||| |||| |||||||||||| ||| |||||||  ||||| ||||||||||| ||||||| ||||  ||||||||||||||  ||||||||||||||    
T  11998848 cctgtcgtttattttcttgtttttgtttctgtttatcacgtgatgttggaacattaaacggaacattgcaaacgttaaaacatctgacataacatattaa 11998749  T
Q  200 aacaagtgcgctagaatt 217  Q
    ||||||||||||||||||    
T  11998748 aacaagtgcgctagaatt 11998731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 16436842 - 16436626
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  16436842 aggactacactagtggatttccttccttgcttggtagcccccatagtaggtgtgtttgtcaccgaattgggtcaacaaactcactgtgttctttactttc 16436743  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
     |||||||||||||| ||||||||||| |||||| ||||||| ||||||| | ||||||||| ||| | |||||| ||||||| |||| ||||| |||||    
T  16436742 ttgtcatttactttcatgtttttatttctgtttaattcgtgatgttggaaaaatgaacggaacattataaacgttgaaacatcttacagaacattttaaa 16436643  T
Q  201 acaagtgcgctagaatt 217  Q
    |||| | ||||||||||    
T  16436642 acaattacgctagaatt 16436626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 20991610 - 20991455
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20991610 aggactacactagtggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttc 20991511  T
Q  101 ctgtcatttactttcttgt-ttttatttatgtttatttcgtgacgttggaacattg 155  Q
    |||||||||| |||||||| ||||||||||||||| ||||||| ||||||||||||    
T  20991510 ctgtcatttattttcttgttttttatttatgtttacttcgtgatgttggaacattg 20991455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 11521501 - 11521716
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| || |||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  11521501 aggactacactagtagatttccttcctggcttggtagcccctagagtaggtgtgtttgtcaccaaactgggtcaacaaactcattgtgttatttactttc 11521600  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    |||||||||||||||||| ||||||||  ||||||  ||||| |||| |||||| | || || ||||  |||| |  ||||||||| ||||| |||||||    
T  11521601 ctgtcatttactttcttg-ttttatttcagtttatcacgtgatgttgaaacattaatcgtaacattgcaaacgctgtaacatcatatataacttattaaa 11521699  T
Q  201 acaagtgcgctagaatt 217  Q
    |||||||||||||||||    
T  11521700 acaagtgcgctagaatt 11521716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 645201 - 644985
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||||| |||||| |||||||||| ||| |||||    
T  645201 aggactacactggtggatttccttcctggcttcgtagcccccatagtaggtgtgtttgtcactgaactgggttaacaaattcattgtgttatttactttc 645102  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    |||||||||| |||||||||||||||| |||||||  ||||| |||| ||||||    | || ||||  |||| | |||||||||||| ||| |||||||    
T  645101 ctgtcatttattttcttgtttttatttctgtttatcgcgtgatgttgaaacattagttgtaacattgcaaacgattaaacatcatacagaacgtattaaa 645002  T
Q  201 acaagtgcgctagaatt 217  Q
    |||||||||||||||||    
T  645001 acaagtgcgctagaatt 644985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 13455203 - 13455418
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||   ||| ||||||||| ||| ||||||||||||||||||||| |||||    
T  13455203 aggactacactagtggatttccttccttgcttggtagcccccagagtaggtgacgttg-caccgaactaggttaacaaactcattgtgttctttactttc 13455301  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
     ||||||||| | ||||||||||| || |||||||  ||||| ||||||||||| |||| || || |  ||||||||||||||||||| |||||||||||    
T  13455302 ttgtcatttattctcttgtttttagttctgtttataacgtgatgttggaacatttaacgtaacatcgaaaacgttaaaacatcatacagaacatattaaa 13455401  T
Q  201 acaagtgcgctagaatt 217  Q
    |||| |  |||||||||    
T  13455402 acaaatttgctagaatt 13455418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 46 - 217
Target Start/End: Complemental strand, 12325848 - 12325677
Alignment:
Q  46 gtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttcgtgacgt 145  Q
    |||||||||||||||||||||||  ||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||| ||| ||| ||    
T  12325848 gtaggtgtgtttgtcaccgaactaagtcaacaaactcattttgttctttactttccagtcatttactttcttgtttttatttctgtttacttcatgatgt 12325749  T
Q  146 tggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 217  Q
    ||||||||||||||||| ||||  || |||||||||||||||| ||||| |||||||||||||  |||||||    
T  12325748 tggaacattgaacggaacattgcaaatgttaaaacatcatacagaacatcttaaaacaagtgcattagaatt 12325677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 11588532 - 11588316
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||     
T  11588532 aggactacactagtggatttccttcctggcttggtagccgctagagtaggtgtgtttgtcaccgagctgggtcaacaaactcactgtgttctttacttt- 11588434  T
Q  101 ctgtcattta-ctttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaa 199  Q
    ||||| ||||  |||||| ||||||||| ||||| || | ||| |||| |||||| | || || ||||  |||||   ||||||||||||||||||||||    
T  11588433 ctgtcttttatttttcttatttttatttctgtttgttgcatgatgttgaaacattaatcgtaacattgcaaacgtcgtaacatcatacataacatattaa 11588334  T
Q  200 aacaagtgcgctagaatt 217  Q
    ||||||||||||||||||    
T  11588333 aacaagtgcgctagaatt 11588316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 29546228 - 29546436
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||| | ||||||||||||||| ||||||||||||| |||||||||||       || ||| |||||||||||||||| |||||||||| |||||    
T  29546228 aggactacagtagtggatttccttcctggcttggtagccccgagagtaggtgt-------actgaattgggtcaacaaactcactgtgttctttactttc 29546320  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
     ||||||||| ||| |||||||||||| ||||||||| |||| ||||||||||||||||||| ||| | |||||| ||||||| |||| |||||||||||    
T  29546321 ttgtcatttatttttttgtttttatttctgtttattttgtgatgttggaacattgaacggaacattataaacgttgaaacatcttaca-aacatattaaa 29546419  T
Q  201 acaagtgcgctagaatt 217  Q
    |||| || |||||||||    
T  29546420 acaaatgtgctagaatt 29546436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 10279882 - 10279722
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgtt-cttttcttt 99  Q
    ||||||||||| ||| ||||||||||| ||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||| |||| ||||    
T  10279882 aggactacactggtgaatttccttcctggcttggtagcccc-agagtaggtgtgtttgtcgccgaactaggtcaacaaactcattgtgttcctttacttt 10279784  T
Q  100 cctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaa 162  Q
    | ||||||||||||||||| |||||||| |||||| ||||||| ||||||| |||||||||||    
T  10279783 cttgtcatttactttcttg-ttttatttctgtttaattcgtgatgttggaagattgaacggaa 10279722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 26133005 - 26133114
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||  ||| |||||    
T  26133005 aggactacactagtggatttccttcctggcttgatagcccccagagtaggtgtctttgtcaccgaactgggttaacaaactcattgtgtcttttactttc 26133104  T
Q  101 ctgtcattta 110  Q
     |||||||||    
T  26133105 ttgtcattta 26133114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 14165233 - 14165100
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagta-ggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttcttt 99  Q
    ||||||||||| ||||||||||||||| |||  |||||||| |||  | |||||||||||||||||||||| ||||||||||||||||||| ||| ||||    
T  14165233 aggactacactagtggatttccttcctggctatgtagcccc-agacaaaggtgtgtttgtcaccgaactggatcaacaaactcattgtgttatttacttt 14165135  T
Q  100 cctgtcatttactttcttgtttttatttatgtttat 135  Q
    ||||||||||||||||||| |||||||| |||||||    
T  14165134 cctgtcatttactttcttg-ttttatttctgtttat 14165100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 24902174 - 24902059
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| ||||||||||||| | | |||||||||||||||| |||||||||||||||||||  ||||   ||| |||||    
T  24902174 aggactacactagtggatttccttcctggcttggtagcccctataataggtgtgtttgtcactgaactgggtcaacaaactc--tgtgccttttactttc 24902077  T
Q  101 ctgtcatttactttcttg 118  Q
     |||||||||||||||||    
T  24902076 ttgtcatttactttcttg 24902059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 10658451 - 10658371
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 81  Q
    ||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  10658451 aggactacactagtggatttccttcctggcttggtagcctccagagtaggtgtgtttgtcacggaactgggttaacaaact 10658371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 14926715 - 14926596
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| || |||||||||| | ||||||||||||||||||||||||||| ||||||| |||||||| ||||||||  |||||   |||  ||||    
T  14926715 aggactacactagtagatttccttcttggcttggtagcccccagagtaggtgtgtctgtcaccaaactgggttaacaaacttgttgtgccatttaatttc 14926616  T
Q  101 ctgtcatttactttcttgtt 120  Q
     |||||||||||||||||||    
T  14926615 ttgtcatttactttcttgtt 14926596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 15350181 - 15350062
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| || |||||||||| | ||||||||||||||||||||||||||| ||||||| |||||||| ||||||||  |||||   |||  ||||    
T  15350181 aggactacactagtagatttccttcttggcttggtagcccccagagtaggtgtgtctgtcaccaaactgggttaacaaacttgttgtgccatttaatttc 15350082  T
Q  101 ctgtcatttactttcttgtt 120  Q
     |||||||||||||||||||    
T  15350081 ttgtcatttactttcttgtt 15350062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 7586621 - 7586698
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 79  Q
    ||||||||||| ||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  7586621 aggactacactagtggatttccttcctggcttggtagcccc-agagtaggtatgtttgtcaccgaactgggtcaacaaa 7586698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 23057274 - 23057196
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 79  Q
    ||||||||||| ||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  23057274 aggactacactagtgaatttccttcctggcttggtagccctcagagtaggtgtgtttgtcaccgaactgggttaacaaa 23057196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 21260583 - 21260503
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 81  Q
    |||||||||||  ||||||| |||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21260583 aggactacactaatggattttcttcctaagttggtagcccccagagtaggtgtgtttgtcaccgaactggatcaacaaact 21260503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 42636315 - 42636235
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 81  Q
    ||||||||||| ||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||| ||| ||||||||    
T  42636315 aggactacactagtggatttccttccttgcttggtagcctccagagtaggtatgtttgtcaccgaacttggttaacaaact 42636235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 31269148 - 31269224
Alignment:
Q  4 actacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaac 80  Q
    |||||||| ||||||||||||| | |||||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  31269148 actacactagtggatttccttcatggcttggtagcccccggagtaggtgagtttgtcaccgaactgggttaacaaac 31269224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 7508501 - 7508426
Alignment:
Q  3 gactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    ||||||||| ||||||||||||||| ||||||||||||| | ||||||||||||||||| |||||||||| |||||    
T  7508501 gactacactagtggatttccttcctggcttggtagccccaaaagtaggtgtgtttgtcatcgaactgggttaacaa 7508426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 14687433 - 14687358
Alignment:
Q  3 gactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    ||||||||| ||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||| |||||    
T  14687433 gactacactagtgaatttccttcctagcttggtagcctccatagtaggtgtgtttgtcaccgaactaggttaacaa 14687358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 20596918 - 20596993
Alignment:
Q  4 actacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 79  Q
    |||||||| || |||||||||| | |||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  20596918 actacactagtcgatttccttcttggcttggtagcccccagagtaggtgtgtttgtcaccgaactcggttaacaaa 20596993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10251508 - 10251431
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    ||||||||||| |  |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| |||||    
T  10251508 aggactacactagaagatttccttcctggcttggtagcctccagagtaggtgtgtttatcaccgaactgggttaacaa 10251431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 23956945 - 23956864
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 82  Q
    ||||||||||| |||||||| |||||| ||||||||||| | | ||||| |||||||||||||||||| |||||||||||||    
T  23956945 aggactacactagtggattttcttcctggcttggtagcctctaaagtagatgtgtttgtcaccgaactaggtcaacaaactc 23956864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 48797709 - 48797795
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtg 88  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||   ||| ||| ||||||||| |||||||||| ||||    
T  48797709 aggactacactagtggatttccttcctggcttggtagcccccagagtaggtgacgttg-cactgaactgggttaacaaactcactgtg 48797795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 109
Target Start/End: Original strand, 11560610 - 11560703
Alignment:
Q  15 ggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcattt 109  Q
    ||||||||||||||||||||||||||||||||||||||    || ||||||||||||| |||||||||| ||||   ||||||||||| ||||||    
T  11560610 ggatttccttcctagcttggtagcccccagagtaggtgacagtg-caccgaactgggttaacaaactcactgtgccattttctttcctttcattt 11560703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 20925232 - 20925286
Alignment:
Q  45 agtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttcttt 99  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  20925232 agtaggtgtgtttatcaccgaactgggtcaacaaactcattgtgttctttacttt 20925286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 9894157 - 9894226
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgg 70  Q
    ||||||||||| |||||||||||| ||  |||||||| ||||||||||||||||||||||||| ||||||    
T  9894157 aggactacactagtggatttccttactgacttggtagtccccagagtaggtgtgtttgtcaccaaactgg 9894226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 14984739 - 14984659
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 82  Q
    ||||||||||| ||||||||||||||| ||||| ||||||||||||||||||   ||| ||||||||||||| |||||||||    
T  14984739 aggactacactagtggatttccttcctggcttgatagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 14984659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 15414350 - 15414270
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 82  Q
    ||||||||||| ||||||||||||||| ||||| ||||||||||||||||||   ||| ||||||||||||| |||||||||    
T  15414350 aggactacactagtggatttccttcctggcttgatagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 15414270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23082864 - 23082941
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    ||||||||||| |||||||||||||||  |||||||||||  ||||||||||||||| ||||| |||||||| |||||    
T  23082864 aggactacactagtggatttccttcctgacttggtagcccgtagagtaggtgtgtttctcaccaaactgggttaacaa 23082941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23580044 - 23580121
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    ||||||||||| || |||||||||| | |||||||| |||||| |||||||||||| ||||||||||||||| |||||    
T  23580044 aggactacactagtagatttccttcttggcttggtaacccccatagtaggtgtgttagtcaccgaactgggttaacaa 23580121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 3290775 - 3290861
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtg 88  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||| ||||   ||| |||| |||||||| |||||||||| ||||    
T  3290775 aggactacactagtggatttccttcctggcttggtagcccccagagttggtgacgttg-caccaaactgggttaacaaactcactgtg 3290861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 10309583 - 10309650
Alignment:
Q  4 actacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactggg 71  Q
    |||||||| ||||| ||||||| | |||||||||||||||||||||||| ||||||||| ||||||||    
T  10309583 actacactagtggacttccttcttggcttggtagcccccagagtaggtgcgtttgtcactgaactggg 10309650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 11407040 - 11407118
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 79  Q
    ||||||||| | | ||| ||||||||| || |||||||||||||||||||||||||||||| | |||||||| ||||||    
T  11407040 aggactacattagcggacttccttcctggcatggtagcccccagagtaggtgtgtttgtcatctaactgggttaacaaa 11407118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 23296571 - 23296499
Alignment:
Q  1 aggactacacttgtggatttccttccta---gcttggtagcccccagagtaggtgtgtttgtcaccgaactgg 70  Q
    |||||||||||  |||||||||||||||   ||||||||||| ||| ||||||||||||||||||||||||||    
T  23296571 aggactacactaatggatttccttcctattagcttggtagcctccaaagtaggtgtgtttgtcaccgaactgg 23296499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6045388 - 6045312
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    ||||||||||| |||||||| |||||| ||||||||| |||||||||||| |||||| |||||||||| ||| |||||    
T  6045388 aggactacactagtggattttcttcctggcttggtag-ccccagagtaggcgtgtttttcaccgaactaggtaaacaa 6045312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 42782823 - 42782747
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||||||||   ||| ||||||||||||| |||||    
T  42782823 aggactacactagtggattttcttcctggcttggtagcccccagagtaggtgacattg-caccgaactgggttaacaa 42782747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 20588800 - 20588875
Alignment:
Q  3 gactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 79  Q
    ||||||||| || |||||||||||| ||||||||||||||| |||| || ||||||||||||||||| || ||||||    
T  20588800 gactacactagttgatttccttcctggcttggtagcccccaaagta-gtttgtttgtcaccgaactgagttaacaaa 20588875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 7620148 - 7620062
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtg 88  Q
    ||||||||||| |||||||||||||||  |||||||||| ||| ||||||||   ||| ||||||||||||| |||||||||| ||||    
T  7620148 aggactacactagtggatttccttcctgacttggtagcctccaaagtaggtgacgttg-caccgaactgggttaacaaactcactgtg 7620062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 9566972 - 9566893
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 82  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||||||||    ||| ||||||||||||| |||||||||    
T  9566972 aggactacacttgtggatttcc-tcctggcttggtagccccctgagtaggtaacgttg-caccgaactgggttaacaaactc 9566893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10038819 - 10038902
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagccccca------gagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    ||||||||||| ||||||||||||  | |||| ||||||||||      ||||||||||||||||||||||||||||| |||||    
T  10038819 aggactacactagtggatttccttatttgcttagtagcccccaaacccagagtaggtgtgtttgtcaccgaactgggttaacaa 10038902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15708239 - 15708195
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccaga 45  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||    
T  15708239 aggactacactagtggatttccttcctagcttggtagaccccaga 15708195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 19353193 - 19353122
Alignment:
Q  6 tacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    |||||| ||||||||||||| | |||| ||||||| ||||||||||||| |||||| |||||||||| |||||    
T  19353193 tacactagtggatttccttcttggcttagtagccctcagagtaggtgtg-ttgtcatcgaactgggttaacaa 19353122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 23174971 - 23175050
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccaga-gtaggtgtgtttgtcaccgaactgggtcaacaaac 80  Q
    ||||||||||| ||||||||||||||| ||||||||||||| ||| |||||||   ||| ||||||||||||| |||||||    
T  23174971 aggactacactagtggatttccttcctggcttggtagcccctagatgtaggtgatgttg-caccgaactgggttaacaaac 23175050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 30226153 - 30226066
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccaga-gtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtg 88  Q
    ||||||||||| |||||||||||||||  |||||||||||||||| |||||||   ||| ||||||||||||| ||||| ||| |||||    
T  30226153 aggactacactagtggatttccttcctgacttggtagcccccagatgtaggtgacgttg-caccgaactgggttaacaatctctttgtg 30226066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 4794680 - 4794730
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtg 52  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  4794680 aggactacactagtggatttcct-cctggcttggtagcccccagagtaggtg 4794730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 11628695 - 11628621
Alignment:
Q  13 gtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtg 88  Q
    ||||||||||||||||| |||||| |||||| ||||||||   ||| ||||||||||||| |||||||||| ||||    
T  11628695 gtggatttccttcctagtttggtaacccccaaagtaggtgacgttg-caccgaactgggttaacaaactcactgtg 11628621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 15436116 - 15436065
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtg 52  Q
    ||||||||||| |||||||||||| || ||||||||||||| ||||||||||    
T  15436116 aggactacactagtggatttcctttctggcttggtagcccctagagtaggtg 15436065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 2076561 - 2076496
Alignment:
Q  13 gtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 79  Q
    ||||||||||||| | ||||||||||||||||||||||||   ||| ||||||||||||| ||||||    
T  2076561 gtggatttccttcatggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaa 2076496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 2082980 - 2082915
Alignment:
Q  13 gtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 79  Q
    ||||||||||||| | ||||||||||||||||||||||||   ||| ||||||||||||| ||||||    
T  2082980 gtggatttccttcatggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaa 2082915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 9564323 - 9564244
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 82  Q
    |||||||||||  |||||||||| ||| |||| |||||||||||||||||||   ||| ||||||||||||| |||||||||    
T  9564323 aggactacactattggatttcct-cctggctttgtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 9564244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24813993 - 24813952
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagccccc 42  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  24813993 aggactacactagtggatttccttcctggcttggtagccccc 24813952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 10279712 - 10279621
Alignment:
Q  91 cttttctttcctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatc 183  Q
    |||| ||||| ||||||||||||||||| |||| ||| | |||| ||||||| ||||||| |||||||||||  || | |||||| |||||||    
T  10279712 ctttactttcttgtcatttactttcttg-ttttgtttctatttaattcgtgatgttggaagattgaacggaactttataaacgttgaaacatc 10279621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 15506335 - 15506284
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtg 52  Q
    ||||||||||| |||||||||| | || ||||||||||||| ||||||||||    
T  15506335 aggactacactagtggatttccattctggcttggtagcccctagagtaggtg 15506284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 4547851 - 4547923
Alignment:
Q  15 ggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtg 88  Q
    ||||||||||||| ||||| ||||||| ||||||||||   ||| || |||| ||||| |||||||||||||||    
T  4547851 ggatttccttcctggcttgatagcccctagagtaggtgctgttg-catcgaattgggttaacaaactcattgtg 4547923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 141; Significance: 9e-74; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 11667953 - 11668168
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| || |||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||| |||||    
T  11667953 aggactacactagtagatttccttcctggcttggtagcccccagagtaggtgtgtttctcatcgaactgggtcaacaaactcactgtgttctttactttc 11668052  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
     | ||||||| ||||||||||||||||||||||||||  ||| ||||||||||||||||||| ||||| |||||| ||||||| |||| |||||||||||    
T  11668053 ttttcatttattttcttgtttttatttatgtttattttttgatgttggaacattgaacggaacattgtaaacgttgaaacatcttaca-aacatattaaa 11668151  T
Q  201 acaagtgcgctagaatt 217  Q
    |||||||||||||||||    
T  11668152 acaagtgcgctagaatt 11668168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 4246103 - 4245890
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4246103 aggactacactagtggatttccttcctgtcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttc 4246004  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    |||||||||| |||||||||||||||| || ||||  ||||| |||| |||||| | |  || ||||  ||||| |||||||||||||||||||||||||    
T  4246003 ctgtcatttattttcttgtttttatttctgcttatcgcgtgatgttgaaacattaatcataacattgcaaacgtcaaaacatcatacataacatattaaa 4245904  T
Q  201 acaagtgcgctaga 214  Q
    ||||||| ||||||    
T  4245903 acaagtgtgctaga 4245890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 26972491 - 26972706
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |    
T  26972491 aggactacactagtggatttccttactggcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttaattac 26972590  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    ||||| |||| |||||||||||||||  |||||||  |  || |||| |||||| | || || || |  ||||||  ||||||||||| |||||||||||    
T  26972591 ctgtcttttattttcttgtttttattactgtttatcgccggatgttgaaacattaatcgtaacatcg-aaacgttgtaacatcatacagaacatattaaa 26972689  T
Q  201 acaagtgcgctagaatt 217  Q
    |||||||||||||||||    
T  26972690 acaagtgcgctagaatt 26972706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 1973381 - 1973163
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| |||||||||||||||  ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||   ||||||||  ||||    
T  1973381 aggactacactagtggatttccttcctgacttggtatcccccagagtaggagtgtttgtcaccgaactgggtcaacaaactcaccatgttctttattttc 1973282  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
     |||||||||||||||||||||||||| || ||| |||| || |||||||||||||| |||| ||| | ||| || || |||| |||| ||||| |||||    
T  1973281 ttgtcatttactttcttgtttttatttctg-ttaattcgcgatgttggaacattgaatggaacattataaacattgaagcatcttacaaaacattttaaa 1973183  T
Q  201 acaagtgcgctagaattaca 220  Q
    | |||| |||||||||||||    
T  1973182 ataagtacgctagaattaca 1973163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 13165462 - 13165249
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||||||||||||||||| | |||||||||  |||||||||||||| ||||||||||| |||||||||||| |||||    
T  13165462 aggactacactagtggatttccttcctagcttggtagcccc-acagtaggtgt--ttgtcaccgaactgagtcaacaaacttattgtgttctttactttc 13165366  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    || || |||| ||||||||||||| || |||||||  ||||| |||| |||||| | |  || || |  ||||||||||||||||||| ||| |||||||    
T  13165365 ctatcttttattttcttgtttttaattctgtttatcgcgtgatgttgtaacattaatcataacatcgcaaacgttaaaacatcatacagaacgtattaaa 13165266  T
Q  201 acaagtgcgctagaatt 217  Q
    ||||||| |||||||||    
T  13165265 acaagtgtgctagaatt 13165249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 14745873 - 14746080
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  |||||| ||| |||||    
T  14745873 aggactacactagtggattttcttcctggcttggtagcccccagagttggtgtgtttgtcaccgagctgggtcaacaaactcgctgtgttatttactttc 14745972  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    |||||||||| |||||||||||| ||| |||||||  |||||  ||| |||||| | |  || ||||  |||  |||||||||||||||||| | |||||    
T  14745973 ctgtcatttattttcttgtttttgtttctgtttatcgcgtgatattgaaacattaatcttaacattgcaaacactaaaacatcatacataacctcttaaa 14746072  T
Q  201 acaagtgc 208  Q
    ||||||||    
T  14746073 acaagtgc 14746080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 13 - 159
Target Start/End: Original strand, 20859645 - 20859791
Alignment:
Q  13 gtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttact 112  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| |||| |    
T  20859645 gtggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaaatcattgtgttctttactttcttgtcgtttatt 20859744  T
Q  113 ttcttgtttttatttatgtttatttcgtgacgttggaacattgaacg 159  Q
    |||||||||||| ||  ||||||  ||||| |||| |||||||||||    
T  20859745 ttcttgtttttactttcgtttatcgcgtgatgttgaaacattgaacg 20859791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 17851463 - 17851577
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||| | |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| | |||||    
T  17851463 aggactacactagtggatttccttcttggcttagtagcccccagagtaggtgtgtttgtcaccgaactaggtcaacaaactcactgtgttctatactttc 17851562  T
Q  101 ctgtcatttactttc 115  Q
     ||||||||| ||||    
T  17851563 ttgtcatttattttc 17851577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 20841355 - 20841513
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| ||||||||||||  | ||||||||||||||||||||||||   ||||||||||||||||||||||| |||||    
T  20841355 aggactacactagtggatttccttcctggcttggtagcccatatagtaggtgtgtttgtcaccgaactatttcaacaaactcattgtgttctttactttc 20841454  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacg 159  Q
     |||  |||| ||| ||||||||| || |||||||  ||||| |||  |||||||||||    
T  20841455 ttgttgtttatttttttgtttttacttttgtttatcgcgtgatgttaaaacattgaacg 20841513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 23478025 - 23478151
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||   ||| |||||    
T  23478025 aggactacactagtggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcactgaactaggtcaacaaactcactgtgccatttactttc 23478124  T
Q  101 ctgtcattta-ctttcttgtttttatt 126  Q
     |||||||||  |||||||||||||||    
T  23478125 ttgtcatttatttttcttgtttttatt 23478151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 17379713 - 17379790
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17379713 aggactacactagtggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcaccgaactgggttaacaa 17379790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 17355921 - 17355998
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    ||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17355921 aggactacactggtggatttccttccaggcttggtagcccccagagtaggtgtgtttgtcaccgaactgggttaacaa 17355998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 96 - 217
Target Start/End: Complemental strand, 9452113 - 9451993
Alignment:
Q  96 ctttcctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacata 195  Q
    ||||||||||||||| |||||||||||||||| || ||||  ||||| ||||||||||| | || || ||||  ||||||||||||||||| | |||||     
T  9452113 ctttcctgtcatttattttcttgtttttatttctgcttatcgcgtgatgttggaacattaatcgtaacattgcaaacgttaaaacatcatatagaacat- 9452015  T
Q  196 ttaaaacaagtgcgctagaatt 217  Q
    ||||||||||||||||||||||    
T  9452014 ttaaaacaagtgcgctagaatt 9451993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 18390200 - 18390273
Alignment:
Q  6 tacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 79  Q
    |||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18390200 tacactagtggatttccttactggcttggtagcccccagagtaggtgtgtttgtcaccgaactgggttaacaaa 18390273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 41330892 - 41331009
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    |||| |||||| |||| ||| |||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||   ||| | |||    
T  41330892 aggattacactagtggttttacttcctggcttagtagcccccaaagtaggtgtgtttgtcaccgaactgggtcaacaaactctttgtgccttttacattc 41330991  T
Q  101 ctgtcatttactttcttg 118  Q
     ||||||||| |||||||    
T  41330992 ttgtcatttattttcttg 41331009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 15804201 - 15804282
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 82  Q
    ||||||||||| ||| |||| |||||| ||||||||||||||| |||||||||||||||||| ||||||||| |||||||||    
T  15804201 aggactacactagtgaattttcttcctggcttggtagcccccatagtaggtgtgtttgtcactgaactgggttaacaaactc 15804282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12753129 - 12753049
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 81  Q
    |||||||| || |||||||| |||||| ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  12753129 aggactacgctagtggatttacttcctggcttggtagcctccagagtaggtgtgtttctcaccgaactgggttaacaaact 12753049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 10340249 - 10340364
Alignment:
Q  3 gactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcct 102  Q
    ||||||| | |||||||||||||||  ||| ||||||||||||||||||||  |||| |||||||||||||||||||||   ||||   ||| |||||||    
T  10340249 gactacaatagtggatttccttcctgacttagtagcccccagagtaggtgtacttgttaccgaactgggtcaacaaactttctgtgccttttactttcct 10340348  T
Q  103 gtcatttactttcttg 118  Q
    ||| |||| |||||||    
T  10340349 gtcttttattttcttg 10340364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 33062453 - 33062372
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactca 83  Q
    ||||||||||| |||||||||||| || ||||||||||||||||||||||||   ||| ||||||||||||| ||||||||||    
T  33062453 aggactacactagtggatttcctttctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactca 33062372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 51472183 - 51472260
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    ||||||||||| ||||||||||||| | | |||||||||||||||||| ||||||||||||| ||| ||||| |||||    
T  51472183 aggactacactagtggatttccttcttggtttggtagcccccagagtatgtgtgtttgtcactgaattgggttaacaa 51472260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 17012070 - 17012019
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtg 52  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  17012070 aggactacactagtggatttccttcctggcttggtagcccccagagtaggtg 17012019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8281988 - 8281911
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    ||||||||| | |||| |||||||||| ||||||| ||| || ||||||||||||||||||||||||| ||| |||||    
T  8281988 aggactacaatagtgggtttccttcctggcttggtcgcctccggagtaggtgtgtttgtcaccgaactaggttaacaa 8281911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 17038314 - 17038207
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||||||||||||   ||| ||||||||||||| ||||||||   |||||| ||| |||||    
T  17038314 aggactacactagtggatttcct-cctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaacttcctgtgttttttactttc 17038217  T
Q  101 ctgtcattta 110  Q
     |||| ||||    
T  17038216 ttgtctttta 17038207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 40313315 - 40313400
Alignment:
Q  2 ggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtg 88  Q
    |||||||||| ||||||||||||||| |||||||||||||| ||||||||    ||| ||| ||||||||| |||||||||| ||||    
T  40313315 ggactacactagtggatttccttcctggcttggtagccccctgagtaggtaacgttg-cactgaactgggttaacaaactcactgtg 40313400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 45599421 - 45599471
Alignment:
Q  2 ggactacacttgtggatttccttcctagcttggtagcccccagagtaggtg 52  Q
    |||||||| | ||||||||||||||| ||||||||||||| ||||||||||    
T  45599421 ggactacattagtggatttccttcctggcttggtagccccgagagtaggtg 45599471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 18379856 - 18379899
Alignment:
Q  36 agcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 79  Q
    |||||| || ||||||||||||||||||||||||||| ||||||    
T  18379856 agcccctagtgtaggtgtgtttgtcaccgaactgggttaacaaa 18379899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 8902121 - 8902055
Alignment:
Q  13 gtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 79  Q
    ||||| |||||||||  ||||||||| | ||||| |||||||||||||||| ||||| || ||||||    
T  8902121 gtggaattccttcctgacttggtagctctcagagcaggtgtgtttgtcaccaaactgagttaacaaa 8902055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 20841526 - 20841560
Alignment:
Q  183 catacataacatattaaaacaagtgcgctagaatt 217  Q
    ||||||||||||||||||||||||||| |||||||    
T  20841526 catacataacatattaaaacaagtgcgttagaatt 20841560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 139; Significance: 1e-72; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 17 - 223
Target Start/End: Original strand, 11221374 - 11221580
Alignment:
Q  17 atttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttct 116  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||| |||||    
T  11221374 atttccttcctggtttggtagcccccagagtaggtgtgtttgtcaccgaactaggtcaacaaactcactgtgttctttactttcctgtcatttattttct 11221473  T
Q  117 tgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaat 216  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||||| ||||  |||||| ||||||| |||| |||| ||||||||||||||||||||||    
T  11221474 tgtttttatttctgtttatttcatgatgttggaacattgaacggaacattgaaaacgtttaaacatcgtacaaaacaaattaaaacaagtgcgctagaat 11221573  T
Q  217 tacagat 223  Q
    | |||||    
T  11221574 ttcagat 11221580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 23541505 - 23541719
Alignment:
Q  4 actacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctg 103  Q
    |||||||| ||||||||||||||  | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||    
T  23541505 actacactagtggatttccttcccggtttggtagcccccagagtaggtgtgtttgtcaccgaactaggtcaacaaactcattgtgttctttacattcctg 23541604  T
Q  104 tcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacg-gaatattgttaacgttaaaacatcatacataacatattaaaac 202  Q
    ||||||| |||||||||||||||| || ||||  ||||| ||||||||||||| ||  || ||||  ||||||||||||||||||||||||||||||||     
T  23541605 tcatttattttcttgtttttatttctgcttatcgcgtgatgttggaacattgatcgtaaacattgcaaacgttaaaacatcatacataacatattaaaat 23541704  T
Q  203 aagtgcgctagaatt 217  Q
    ||||||| |||||||    
T  23541705 aagtgcggtagaatt 23541719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 45133729 - 45133516
Alignment:
Q  4 actacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctg 103  Q
    |||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||| ||    
T  45133729 actacactagtggatttccttcctggcttgatagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcaatgtgtcctttactttcttg 45133630  T
Q  104 tcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaaca 203  Q
    || |||| |||||||||||||||| |||||||  | ||| ||| ||||||||||| ||| ||||  || ||||||||||| || | ||||||||||||||    
T  45133629 tcgtttattttcttgtttttatttctgtttatcgcatgatgttagaacattgaacagaacattgcaaatgttaaaacatcgtagagaacatattaaaaca 45133530  T
Q  204 agtgcgctagaatt 217  Q
    ||||| ||||||||    
T  45133529 agtgcactagaatt 45133516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 33977126 - 33976910
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| |||||||||||| ||  ||||||||||||||||||||||| |||||| |||||||||||||||||||||||  || |||||| |||||    
T  33977126 aggactacactagtggatttcctttctgacttggtagcccccagagtaggtgcgtttgttaccgaactgggtcaacaaactcacagtattctttactttc 33977027  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
     ||||||||| ||||||||||| |||| |||||||||||||| ||||||||||||||||||| |||   ||  || ||||||| |||| |||||||||||    
T  33977026 ttgtcatttattttcttgttttgatttctgtttatttcgtgatgttggaacattgaacggaacattacaaatattgaaacatcttacaaaacatattaaa 33976927  T
Q  201 acaagtgcgctagaatt 217  Q
    ||||||| |||||||||    
T  33976926 acaagtgtgctagaatt 33976910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 24092025 - 24091824
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||             
T  24092025 aggactacactagtggatttccttcctggcttggtagcccctagagtaggtgtgtttgtcaccgaactaggtcaacaaactcactgtgttc--------- 24091935  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
          ||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||| ||| | |||||| ||||||| |||| |||||||||||    
T  24091934 ------tttactttcttgtttttatttctgtttatttcgtgatgttggaacattgaacagaacattataaacgttgaaacatcttacagaacatattaaa 24091841  T
Q  201 acaagtgcgctagaatt 217  Q
    |||||||||||||||||    
T  24091840 acaagtgcgctagaatt 24091824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 2 - 211
Target Start/End: Complemental strand, 33961828 - 33961619
Alignment:
Q  2 ggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcc 101  Q
    |||||||||| || ||||||||||||  | ||||||||||||||||||||| |||||| |||||||||||||||||||||||  ||||||||| |||||     
T  33961828 ggactacactagttgatttccttcctgacgtggtagcccccagagtaggtgagtttgttaccgaactgggtcaacaaactcacagtgttctttactttct 33961729  T
Q  102 tgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaa 201  Q
    ||||||||| ||||||||||| |||| |||||||||||||| ||||||||||| || ||||  || | |||||| ||||||| |||| |||  |||||||    
T  33961728 tgtcatttattttcttgttttgatttctgtttatttcgtgatgttggaacatttaagggaacgttataaacgttgaaacatcttacagaactaattaaaa 33961629  T
Q  202 caagtgcgct 211  Q
    ||||||||||    
T  33961628 caagtgcgct 33961619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 25240473 - 25240257
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| | ||||||||||||   ||||||||||||||||||||||||||| |||||||||| |||    ||| |||||    
T  25240473 aggactacactggtggatttccttcctggtttggtagcccccttggtaggtgtgtttgtcaccgaactgggtaaacaaactcaatgtaccttttactttc 25240374  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
     ||||||||| || ||||||||||||| |||||| |||||||  |||||||||||||||||| ||| | | |||| |||||||  |||||||||||||||    
T  25240373 ttgtcatttatttccttgtttttatttttgtttacttcgtgatattggaacattgaacggaacattataaccgttgaaacatcgcacataacatattaaa 25240274  T
Q  201 acaagtgcgctagaatt 217  Q
    |||||| ||||||||||    
T  25240273 acaagtacgctagaatt 25240257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 63 - 217
Target Start/End: Original strand, 27925576 - 27925730
Alignment:
Q  63 cgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaa 162  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||| |||| ||||||||||| ||    
T  27925576 cgaactgggtcaacaaactcactgtgttctttactttcctgtcatttattttcttgtttttatttctgtttatttcgtgatgttgaaacattgaacgaaa 27925675  T
Q  163 tattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 217  Q
     ||||   |||||||||||||  ||||||||||||||||||| ||||||||||||    
T  27925676 cattgcatacgttaaaacatctgacataacatattaaaacaaatgcgctagaatt 27925730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 38 - 123
Target Start/End: Complemental strand, 22485174 - 22485089
Alignment:
Q  38 cccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgttttt 123  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  22485174 cccccagagtagttgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcctgtcttttattttcttgttttt 22485089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 55 - 217
Target Start/End: Complemental strand, 22472798 - 22472634
Alignment:
Q  55 tttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttat--ttatgtttatttcgtgacgttggaaca 152  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||| |||| |||| |||||||||||| |  || |||||||   |||| |||| ||||    
T  22472798 tttgtcaccgaactgggtcaacatactcattgtgttctttactttcatgtcttttattttcttgtttttttaattctgtttatcgtgtgatgttgaaaca 22472699  T
Q  153 ttgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 217  Q
    || | || || || |  ||||||||||||||||||| ||| ||||||||||||||  ||||||||    
T  22472698 ttaatcgtaacatcgcaaacgttaaaacatcatacagaacgtattaaaacaagtgtcctagaatt 22472634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 20254974 - 20255054
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 81  Q
    ||||| ||||| ||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  20254974 aggaccacactagtggatttccttcctagcttggtagcccccatagtacatgtgtttgtcaccgaactgggtcaacaaact 20255054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 1562458 - 1562537
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaac 80  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||| |||||||    
T  1562458 aggactacactagtggatttccttcctggcttggtagcccccaaagtaggtgtgtttgtcgccgaactgggttaacaaac 1562537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12814683 - 12814760
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| |||||    
T  12814683 aggactacactagtgaatttccttcctggcttggtagcccccagagtaggtgtgtttgtcaccaaattgggttaacaa 12814760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 12240305 - 12240228
Alignment:
Q  2 ggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 79  Q
    |||||||||| | ||||||||||||| | ||||||||| || ||||||||||||||||||||||||||||| ||||||    
T  12240305 ggactacactagcggatttccttcctggtttggtagcctccggagtaggtgtgtttgtcaccgaactgggttaacaaa 12240228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 24384629 - 24384564
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaa 66  Q
    ||||||||||| |||||||| |||||| |||||||||||||||||||| |||||||||||||||||    
T  24384629 aggactacactagtggattttcttcctggcttggtagcccccagagtacgtgtgtttgtcaccgaa 24384564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9996567 - 9996487
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 81  Q
    ||||||||| | ||||||||| |||||  |||||||| | |||||||||||||||||||||||||||||||| ||||||||    
T  9996567 aggactacaatagtggatttcattcctgacttggtagtctccagagtaggtgtgtttgtcaccgaactgggttaacaaact 9996487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 12376962 - 12377039
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaac 80  Q
    ||||||||||||||||||||||||||| ||||||||| || || |||| |||||||||| |||||||||||| |||||||    
T  12376962 aggactacacttgtggatttccttcct-gcttggtag-ccacatagtatgtgtgtttgttaccgaactgggttaacaaac 12377039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 23249802 - 23249716
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtg 88  Q
    ||||||||||| ||||||||||||| | ||||||||||||||||||||||||   ||| ||||||| ||||| ||||||||| |||||    
T  23249802 aggactacactagtggatttccttcttggcttggtagcccccagagtaggtgacgttg-caccgaattgggttaacaaactcgttgtg 23249716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 39081033 - 39080982
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtg 52  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  39081033 aggactacactagtggatttccttcctggcttggtagcccccagagtaggtg 39080982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 8726911 - 8726861
Alignment:
Q  2 ggactacacttgtggatttccttcctagcttggtagcccccagagtaggtg 52  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  8726911 ggactacactagtggatttccttcctggcttggtagcccccagagtaggtg 8726861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 17279953 - 17279876
Alignment:
Q  4 actacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 82  Q
    |||||||| ||||||||||||||| |||||||| |||||||||||||||   ||| ||||||||||||| |||||||||    
T  17279953 actacactagtggatttccttcctggcttggtatcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 17279876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 22476298 - 22476240
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgt 59  Q
    ||||||||||| ||||||||||||||| |||||||||||| || |||||||||||||||    
T  22476298 aggactacactagtggatttccttcctggcttggtagccctcaaagtaggtgtgtttgt 22476240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 33466251 - 33466352
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||||||||   ||| ||||||||||| | |||||||||  ||||   |||||||||    
T  33466251 aggactacactagtggattttcttcctggcttggtagcccccagagtaggtgacgttg-caccgaactggattaacaaactctctgtgcctttttctttc 33466349  T
Q  101 ctg 103  Q
    |||    
T  33466350 ctg 33466352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 24850523 - 24850632
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccaga-gtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgt-tcttttctt 98  Q
    ||||||||||| ||||||||||||||||||||||||||||||| | ||||||| | ||||  || |||||||| ||||||||| |||||| | ||| |||    
T  24850523 aggactacactagtggatttccttcctagcttggtagcccccatatgtaggtgag-ttgt-gccaaactgggttaacaaactccttgtgtctttttactt 24850620  T
Q  99 tcctgtcattta 110  Q
    | ||||||||||    
T  24850621 ttctgtcattta 24850632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 13660464 - 13660514
Alignment:
Q  3 gactacacttgtggatttccttcctagcttggtagcccccagagtaggtgt 53  Q
    ||||||||| ||||||||| ||||||| |||||||||||||||||||||||    
T  13660464 gactacactagtggatttctttcctagtttggtagcccccagagtaggtgt 13660514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 13719107 - 13719157
Alignment:
Q  3 gactacacttgtggatttccttcctagcttggtagcccccagagtaggtgt 53  Q
    ||||||||| ||||||||| ||||||| |||||||||||||||||||||||    
T  13719107 gactacactagtggatttctttcctagtttggtagcccccagagtaggtgt 13719157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 17880833 - 17880917
Alignment:
Q  4 actacacttgtggatttccttcctagcttggtag-cccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtg 88  Q
    |||||||| ||||||||||||| | ||||||||| |||||||||||||||   ||| ||||||||||||| |||||||||| ||||    
T  17880833 actacactagtggatttccttcttggcttggtagccccccagagtaggtgacgttg-caccgaactgggttaacaaactcactgtg 17880917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 22874246 - 22874206
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccc 41  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  22874246 aggactacactagtggatttccttcctagcttggtagcccc 22874206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 37155617 - 37155668
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtg 52  Q
    |||| |||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  37155617 aggattacactagtgaatttccttcctggcttggtagcccccagagtaggtg 37155668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 18753952 - 18753875
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    |||||||||||  || ||||||||| | ||||| ||||||  ||||||||||| ||||||| |||||||||| |||||    
T  18753952 aggactacactactgtatttccttcttggcttgatagcccttagagtaggtgtatttgtcatcgaactgggttaacaa 18753875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 22480973 - 22481020
Alignment:
Q  170 aacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 217  Q
    |||||||||| |||||||| ||||||||||||||||||  ||||||||    
T  22480973 aacgttaaaatatcatacaaaacatattaaaacaagtgttctagaatt 22481020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 277
Target Start/End: Original strand, 32513492 - 32513549
Alignment:
Q  220 agatcgggctttggtcgcatcttgcgcaacaacaatgacgacatgttacttgggttct 277  Q
    ||||||||||||||   ||||||||| |||||||||| ||||  ||||||||||||||    
T  32513492 agatcgggctttggggacatcttgcgtaacaacaatggcgactagttacttgggttct 32513549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 5e-69; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 295528 - 295312
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  295528 aggactacactagtggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcactgtgttctttactttc 295429  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
     ||||| ||| |||||||||||||||  ||||||||||| || ||| ||||||||||||||| ||| | ||| || ||||||| |||| ||||||||| |    
T  295428 ttgtcaattattttcttgtttttattcctgtttatttcgagatgttagaacattgaacggaacattataaacattgaaacatcttacagaacatattaga 295329  T
Q  201 acaagtgcgctagaatt 217  Q
    ||||||||| |||||||    
T  295328 acaagtgcgttagaatt 295312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 4 - 222
Target Start/End: Complemental strand, 44452545 - 44452327
Alignment:
Q  4 actacacttgtggatttccttcctagcttggtagcccccaga-gtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcct 102  Q
    |||||||| ||||||||||||||| |||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44452545 actacactagtggatttccttcctggcttgg-agcccctagacgtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttcct 44452447  T
Q  103 gtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaac 202  Q
    ||| |||| |||||||||||||||| | |||||  ||||| ||||||||||| |||| || ||||  ||||||||||||||  ||| |||||||||||||    
T  44452446 gtcgtttattttcttgtttttatttctttttatcacgtgatgttggaacattaaacgaaacattgcaaacgttaaaacatctgacagaacatattaaaac 44452347  T
Q  203 aagtgcgctagaattacaga 222  Q
    ||||||||||||||| ||||    
T  44452346 aagtgcgctagaatttcaga 44452327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 28051204 - 28051011
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    |||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||| |||||    
T  28051204 aggactacactattggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcaccaaactgggtcaacaaactcaccgtgttctttactttc 28051105  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacat 194  Q
     |||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||| ||| | |||||| ||| ||| |||| |||||    
T  28051104 ttgtcatttactttcttgtttttatttctgtttaattcgtgatgttggaacattgaacggaacattataaacgttgaaatatcttacagaacat 28051011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 15635964 - 15636180
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  15635964 aggactacactagtgaatttccttcctggcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcatcaaactcattgtgttctttactttc 15636063  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
     ||| ||||| |||||||||||||||| |||||||  ||||| |||| |||||| | || |  ||||  |||| |||||||||| ||| ||| |||||||    
T  15636064 atgttatttattttcttgtttttatttctgtttatcgcgtgatgttgaaacattaatcgtagcattgaaaacgctaaaacatcaaacagaacgtattaaa 15636163  T
Q  201 acaagtgcgctagaatt 217  Q
    ||||||| |||||||||    
T  15636164 acaagtgtgctagaatt 15636180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 20748255 - 20748469
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| ||||||||||||| | ||||||||   ||| ||||||||||||| |||||||||||| |||||||| |||||    
T  20748255 aggactacactagtggatttccttcctggcttggtagccccaa-agtaggtgatgttg-caccgaactgggttaacaaactcattatgttctttactttc 20748352  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
     ||||||||| |||||||||||||||| |||||||  ||||| |||||||||||||||| || || |  ||||||||||||||||||| |||||||||||    
T  20748353 ttgtcatttattttcttgtttttatttctgtttatcgcgtgatgttggaacattgaacgtaacatcgcaaacgttaaaacatcatacaaaacatattaaa 20748452  T
Q  201 acaagtgcgctagaatt 217  Q
    |||||||||||||||||    
T  20748453 acaagtgcgctagaatt 20748469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 13790747 - 13790531
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||  ||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13790747 aggactacactagtatatttccttcttggcttggtagcccccatagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttc 13790648  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
     |||| |||| |||||||||||||||| |||||||  ||||| |||| |||||| | || || ||||  ||||    ||||||||||| |||||||||||    
T  13790647 atgtcttttattttcttgtttttatttctgtttatcgcgtgatgttgaaacattaatcgtaacattgcaaacgccgtaacatcatacagaacatattaaa 13790548  T
Q  201 acaagtgcgctagaatt 217  Q
    ||||||| |||||||||    
T  13790547 acaagtgtgctagaatt 13790531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 19633954 - 19633739
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| ||||||||||||  ||||||| |||||||||| | ||||| |||||||||||||| |||||| ||| |||||    
T  19633954 aggactacactagtggatttccttcctggcttggtagccct-agagtagatgtgtttgtcgctgaactaggtcaacaaactcactgtgttatttactttc 19633856  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
     ||||| ||| |||||||||||||||| |||||||  | ||| |||||||||||||||| || ||||  |||||||||||||||| || |||||||||||    
T  19633855 ttgtcaattattttcttgtttttatttctgtttatcgcatgatgttggaacattgaacgtaacattgcaaacgttaaaacatcatgcaaaacatattaaa 19633756  T
Q  201 acaagtgcgctagaatt 217  Q
    |||||| ||||||||||    
T  19633755 acaagtacgctagaatt 19633739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 19531974 - 19532188
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||| ||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||    
T  19531974 aggacgacactagtggatttccttcctggcttggtagcccccaaagtaggtgtgtttgtcaccgaattggatcaacaaactcattgtgttctttactttc 19532073  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    || || | || |||||||||||||||| |||||||  ||||| |||| |||||||| || || ||||  |||| |  ||||||||| | |||||||||||    
T  19532074 ctttcttgtattttcttgtttttatttctgtttatcgcgtgatgttgaaacattgatcgtaacattgaaaacgctgtaacatcatatagaacatattaaa 19532173  T
Q  201 acaagtgcgctagaa 215  Q
    ||||||| |||||||    
T  19532174 acaagtgtgctagaa 19532188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 18034986 - 18035203
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||  ||| |||||    
T  18034986 aggactacactagtggatttccttcctggcttggtagcctcaagagtaggtgtgtttgtcaccgaactgggttaacaaactcattgtgtcttttactttc 18035085  T
Q  101 ctgtcatttactttcttgtttttatttatgtt-tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaa 199  Q
    || ||||||| |||||||||||||||| |||| ||  |||||| |||| ||  || || |||| | |   |||||| ||||||| |||| ||||||||||    
T  18035086 ctctcatttattttcttgtttttatttttgttataactcgtgatgttgaaaacttaaatggaacactacaaacgtttaaacatcgtacaaaacatattaa 18035185  T
Q  200 aacaagtgcgctagaatt 217  Q
    ||||||||||||||||||    
T  18035186 aacaagtgcgctagaatt 18035203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 17702474 - 17702340
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||     
T  17702474 aggactacactagtggatttccttcctggcttggtagcccccagagtagttgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttt 17702375  T
Q  101 ctgtcatttactttcttgtttttatttatgtttat 135  Q
    | ||| |||| |||||||||||||||| |||||||    
T  17702374 cagtcttttattttcttgtttttatttctgtttat 17702340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 13 - 217
Target Start/End: Original strand, 1919339 - 1919542
Alignment:
Q  13 gtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttact 112  Q
    ||||||||||||| | ||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  1919339 gtggatttccttcttggcttggtagcccc-atagtaggtgtgtttgtcatggaactgggtcaacaaactcattgtgttatttactttcctgtcatttact 1919437  T
Q  113 ttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgcta 212  Q
    ||||||||||||||| |||||||  ||||| |||| |||||| |  | || ||||  ||||   ||||| |||||| ||| |||||||||||||||||||    
T  1919438 ttcttgtttttatttctgtttatcgcgtgatgttgaaacattaattgtaacattgcaaacgcggaaacaacatacagaacgtattaaaacaagtgcgcta 1919537  T
Q  213 gaatt 217  Q
    |||||    
T  1919538 gaatt 1919542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 18064296 - 18064515
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| |||||||||||||||  |||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||  ||| |||||    
T  18064296 aggactacactagtggatttccttcctgccttggtagcctctagagtaggtgtgtttgtcaccgaactgggttaacaaactcattgtgtcttttactttc 18064395  T
Q  101 ctgtcatttactttcttgtttttatttatgtt-tatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataac--atatt 197  Q
    |||||||||| |||||| ||||||||| |||| ||  |||||| |||| || ||| ||| ||| | |   |||||| ||||||| ||||||||  |||||    
T  18064396 ctgtcatttattttcttatttttatttctgttataactcgtgatgttgaaatattaaacagaacactacaaacgtttaaacatcgtacataacatatatt 18064495  T
Q  198 aaaacaagtgcgctagaatt 217  Q
    |||||||||||||| |||||    
T  18064496 aaaacaagtgcgcttgaatt 18064515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 24195591 - 24195459
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||| | ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||    
T  24195591 aggactacactagtggatttccttcttggcttggtagcccc-agagtaggtgtgtttttcaccgaactgggtcaacaaactcattgtgttctttacattc 24195493  T
Q  101 ctgtcatttactttcttgtttttatttatgttta 134  Q
    ||||| |||| |||||||||||||||| ||||||    
T  24195492 ctgtcttttattttcttgtttttatttctgttta 24195459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 18547716 - 18547593
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    |||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| | |||||    
T  18547716 aggactacactattggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcaccgaattgggtcaacaaactcattgtattctctactttc 18547617  T
Q  101 ctgtcatttactttcttgttttta 124  Q
    |||||||||| ||| |||||||||    
T  18547616 ctgtcatttattttgttgttttta 18547593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 23954661 - 23954802
Alignment:
Q  14 tggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactt 113  Q
    |||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||| |||||| ||| | |||| |||| ||    
T  23954661 tggatttccttcctggcttggtagcctccagagtaggtgtgtttgccaccgaactggatcaacaaactcattgtattctttacttacatgtcttttattt 23954760  T
Q  114 tcttg-tttttatttatgtttatttcgtgacgttggaacatt 154  Q
    ||||| |||||||||||||||||| | ||| |||| ||||||    
T  23954761 tcttgttttttatttatgtttattgcatgatgttgaaacatt 23954802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 13524772 - 13524925
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||  ||||||||||||| |  |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||| |||||    
T  13524772 aggactacaccagtggatttccttcttgacttggtagcccccagagtaggtgt-tttgtgaccgaactgggtcaacaaactcattttgttctttactttc 13524870  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattg 155  Q
     |||  |||| ||||||||||| | ||||||||||  ||||| |||| |||||||    
T  13524871 ttgttgtttattttcttgttttgacttatgtttatcgcgtgatgttgaaacattg 13524925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 15686248 - 15686329
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 82  Q
    |||||||||||  |||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  15686248 aggactacactaatggatttccttcctggcttggtagcccctagagtaggtgtgtttgtcatcgaactgggtcaacaaactc 15686329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 6580957 - 6581037
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 81  Q
    ||||||||||| |||||||||||| || |||||||||||  ||||||||||||||||||||||||||||||| ||||||||    
T  6580957 aggactacactagtggatttccttgctggcttggtagccttcagagtaggtgtgtttgtcaccgaactgggttaacaaact 6581037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 14406722 - 14406799
Alignment:
Q  3 gactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaac 80  Q
    ||||||| | ||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||| |||||||    
T  14406722 gactacattggtggatttccttcctggcttggtagcccacaaagtaggtgtgtttgtcaccgaactgggttaacaaac 14406799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17042844 - 17042924
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 81  Q
    ||||||||||| |||||||||||||||  |||||||||| ||||||||||||||||||||||| |||||| | ||||||||    
T  17042844 aggactacactagtggatttccttcctgccttggtagcctccagagtaggtgtgtttgtcaccaaactggtttaacaaact 17042924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 9031472 - 9031558
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtg 88  Q
    ||||||||||| |||||||||||||||  |||||||||||||||||||||||   ||| ||||||||||||| |||||||||||||||    
T  9031472 aggactacactagtggatttccttcctgacttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactcattgtg 9031558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 980455 - 980533
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 79  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| | |||||||||||||| | ||||| ||||||||||    
T  980455 aggactacactagtggatttccttccttgcttggtagcccccaaaataggtgtgtttgtctctgaactaggtcaacaaa 980533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3552304 - 3552373
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgg 70  Q
    |||||||||||  ||||||| |||||| ||||||||||||| |||||||||| |||||||||||||||||    
T  3552304 aggactacactactggattttcttcctggcttggtagccccaagagtaggtgcgtttgtcaccgaactgg 3552373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 31649758 - 31649690
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgg 70  Q
    ||||||||||  ||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  31649758 aggactacacgagtggatttccttcctggcttggtagaccc-agagtaggtgtgtttgtcaccgaactgg 31649690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 11558414 - 11558489
Alignment:
Q  6 tacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 82  Q
    |||||| ||||||||||||||| ||||||||||| ||| |||||||||| ||||||||||||| ||| |||||||||    
T  11558414 tacactagtggatttccttcctggcttggtagcctccatagtaggtgtg-ttgtcaccgaacttggttaacaaactc 11558489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 11567683 - 11567758
Alignment:
Q  6 tacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 82  Q
    |||||| ||||||||||||||| ||||||||||| ||| |||||||||| ||||||||||||| ||| |||||||||    
T  11567683 tacactagtggatttccttcctggcttggtagcctccatagtaggtgtg-ttgtcaccgaacttggttaacaaactc 11567758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 286983 - 287065
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactca 83  Q
    ||||||| ||| ||||||||||||||| | ||||||| ||||| |||| |||||||||||| |||||| ||| ||||||||||    
T  286983 aggactatactagtggatttccttcctggtttggtagtccccatagtaagtgtgtttgtcatcgaactaggttaacaaactca 287065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 17140434 - 17140531
Alignment:
Q  39 ccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcattta-ctttcttgtttttatttatgtttat 135  Q
    ||||| |||||||| ||||| | ||||| |||||||||||| ||||| |||||||| |||||||| | ||||  ||||||||||| ||||||||||||    
T  17140434 ccccatagtaggtgagtttgacgccgaattgggtcaacaaattcattatgttctttactttcctggcttttatttttcttgttttgatttatgtttat 17140531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 8749106 - 8749059
Alignment:
Q  2 ggactacacttgtggatttccttcctagcttggtagcccccagagtag 49  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||    
T  8749106 ggactacactagtggatttccttcctagcttggtagtccccagagtag 8749059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 9036775 - 9036689
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtg 88  Q
    ||||||||||| ||||||||||||||| | |||||||||||||||||| |||   ||| ||||||||||||| |||||| ||| ||||    
T  9036775 aggactacactagtggatttccttcctggtttggtagcccccagagtatgtgatgttg-caccgaactgggttaacaaattcactgtg 9036689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 7479228 - 7479347
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| |||||||||| |||| ||||||||||||||||| |||| |   ||| |||||||||| || ||||||||| ||||| | ||  |||||    
T  7479228 aggactacactagtggatttcc-tcctggcttggtagcccccagattaggcgacgttg-caccgaactgagttaacaaactctttgtgcttttcactttc 7479325  T
Q  101 ctgtcatttactttcttgtttt 122  Q
     |||| |||||||| |||||||    
T  7479326 ttgtcttttactttgttgtttt 7479347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8224907 - 8224850
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccaga-gtaggtgtgttt 57  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  8224907 aggactacactagtggatttccttcctggcttggtagcccccagatgtaggtgagttt 8224850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 13913858 - 13913739
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    |||| |||||| | ||||||||| ||| ||||||||||||||||||||||||   ||| |||||||| |||| |||||||||  |||||| ||| |||||    
T  13913858 aggagtacactagcggatttcct-cctggcttggtagcccccagagtaggtgacgttg-caccgaaccgggttaacaaactctctgtgttttttactttc 13913761  T
Q  101 ctgtcatttactttcttgtttt 122  Q
     |||| |||| ||| |||||||    
T  13913760 ttgtcttttattttgttgtttt 13913739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21719016 - 21719076
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcac 62  Q
    ||||||||||| ||||||||||||||| ||||||||| ||  ||||||||||||||||||||    
T  21719016 aggactacactagtggatttccttcctggcttggtag-ccttagagtaggtgtgtttgtcac 21719076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 21094792 - 21094866
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 79  Q
    ||||||||||| ||| |||||||||||  |||||||| |||||||||||||||||||||   |||||| ||||||||||    
T  21094792 aggactacactagtgaatttccttcctgacttggtag-ccccagagtaggtgtgtttgt---cgaactaggtcaacaaa 21094866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 17702298 - 17702259
Alignment:
Q  178 aacatcatacataacatattaaaacaagtgcgctagaatt 217  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  17702298 aacatcatacataacttattaaaacaagtgcgctagaatt 17702259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 15686451 - 15686417
Alignment:
Q  48 aggtgtgtttgtcaccgaactgggtcaacaaactc 82  Q
    |||||||||||||||||||||||||||||||||||    
T  15686451 aggtgtgtttgtcaccgaactgggtcaacaaactc 15686417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 3445098 - 3445174
Alignment:
Q  3 gactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaac 80  Q
    ||||||||| |||||||||||||||  |||| ||||| | ||||||||||||||| ||||| ||||| || |||||||    
T  3445098 gactacactagtggatttccttcctgacttgatagcctc-agagtaggtgtgtttatcaccaaactgagttaacaaac 3445174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18476997 - 18476957
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccc 41  Q
    ||||||||||| ||||||||||||||| |||||||||||||    
T  18476997 aggactacactagtggatttccttcctggcttggtagcccc 18476957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 12054539 - 12054624
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtg 88  Q
    |||||||||||||| ||||||| ||| ||||||||| |||| ||||||||||   ||| ||||||||||||| || ||||||| ||||    
T  12054539 aggactacacttgtagatttcc-tccgagcttggtatcccctagagtaggtgacattg-caccgaactgggttaagaaactcactgtg 12054624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 13917910 - 13917831
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 82  Q
    |||| ||||||  |||||||||||| | ||||||||||||||||||||||||   ||| ||||||| ||||| |||||||||    
T  13917910 aggagtacactattggatttccttc-tggcttggtagcccccagagtaggtgacgttg-caccgaattgggttaacaaactc 13917831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 10082380 - 10082443
Alignment:
Q  17 atttccttcctagcttggtagcccccaga-gtaggtgtgtttgtcaccgaactgggtcaacaaac 80  Q
    ||||||||||||||||||||||||| ||| |||||||   ||| ||||||||||||| |||||||    
T  10082380 atttccttcctagcttggtagcccctagatgtaggtgacgttg-caccgaactgggttaacaaac 10082443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 11656089 - 11656010
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 81  Q
    ||||||||||| ||| ||||| |||||  |||||||||| ||||||||||||   ||| |||| |||||||| ||||||||    
T  11656089 aggactacactagtgaatttctttcctgacttggtagcctccagagtaggtgacattg-caccaaactgggttaacaaact 11656010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 26472 - 26256
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  26472 aggactacactagtggatttccttccttgcttggtagcccccatagtaggtgtgtttgtcaccgaattgggtcaacaaactcactgtgttctttactttc 26373  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
     |||||||||||||| ||||||||||| |||||| ||||||| ||||||| | ||||||||| ||| | |||||| ||||||| |||| ||||| |||||    
T  26372 ttgtcatttactttcatgtttttatttctgtttaattcgtgatgttggaaaaatgaacggaacattataaacgttgaaacatcttacagaacattttaaa 26273  T
Q  201 acaagtgcgctagaatt 217  Q
    |||| | ||||||||||    
T  26272 acaattacgctagaatt 26256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 129; Significance: 1e-66; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 10190954 - 10190738
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  10190954 aggactacactggtggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgttttctttactttc 10190855  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    |||||||||| |||||||||||||||| |||||||  | ||| |||| |||||| | |  || ||||  || | | |||||||||||| |||||||||||    
T  10190854 ctgtcatttattttcttgtttttatttttgtttatcgcttgatgttgaaacattaatcttaacattgcaaatgctgaaacatcatacagaacatattaaa 10190755  T
Q  201 acaagtgcgctagaatt 217  Q
    |||||||||||||||||    
T  10190754 acaagtgcgctagaatt 10190738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 10724327 - 10724111
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||| ||||||||||| |||| |||||||||| |||||||||||||||||||||||| |||||||||||||| ||| ||||||  ||||    
T  10724327 aggactacactagtgaatttccttcctggctttgtagcccccaaagtaggtgtgtttgtcaccgaactaggtcaacaaactcactgtattctttaatttc 10724228  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
     ||||||||| |||||||||||||||| ||||||||| |||| ||||||||||||||||||| |||   |||| ||||||||| |||| |||||||||||    
T  10724227 ttgtcatttattttcttgtttttatttctgtttattttgtgatgttggaacattgaacggaacattccaaacggtaaaacatcttacaaaacatattaaa 10724128  T
Q  201 acaagtgcgctagaatt 217  Q
    ||||||||| |||||||    
T  10724127 acaagtgcgttagaatt 10724111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 10938096 - 10937880
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||| ||||||||||| |||| |||||||||| |||||||||||||||||||||||| |||||||||||||| ||| ||||||  ||||    
T  10938096 aggactacactagtgaatttccttcctggctttgtagcccccaaagtaggtgtgtttgtcaccgaactaggtcaacaaactcactgtattctttaatttc 10937997  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
     ||||||||| |||||||||||||||| ||||||||| |||| ||||||||||||||||||| |||   |||| ||||||||| |||| |||||||||||    
T  10937996 ttgtcatttattttcttgtttttatttctgtttattttgtgatgttggaacattgaacggaacattccaaacggtaaaacatcttacaaaacatattaaa 10937897  T
Q  201 acaagtgcgctagaatt 217  Q
    ||||||||| |||||||    
T  10937896 acaagtgcgttagaatt 10937880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 25116893 - 25116675
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggt--agcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctt 98  Q
    ||||||||||| ||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  25116893 aggactacactagtggatttccttcctggcttggtgtagcccccagagtaggtgtgtttgtcaccgaactgggtcaataaactcattgtgttctttactt 25116794  T
Q  99 tcctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatatta 198  Q
    ||||||| |||| |||||| ||||||||| |||||||  ||||| |||| |||||| | || || ||||| || | | |||||| ||||| ||| |||||    
T  25116793 tcctgtcgtttattttcttatttttatttctgtttatcgcgtgatgttgaaacattaatcgtaacattgtaaatgctgaaacattatacagaacgtatta 25116694  T
Q  199 aaacaagtgcgctagaatt 217  Q
    ||||||||| |||||||||    
T  25116693 aaacaagtgtgctagaatt 25116675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 16383958 - 16383741
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||  ||||    
T  16383958 aggactacactagtggatttccttcctggcttggaagcccccagagtaggtgtgtttgtcaccgaactaggtcaacaatctcattgtgttctttaatttc 16383859  T
Q  101 ctgtcatttactttcttgt-ttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaa 199  Q
    ||||| |||| |||||||| |||||||| |||||||  ||||| |||| |||||| | || || |||   ||||  | |||||| |||| ||||||||||    
T  16383858 ctgtcttttattttcttgttttttatttctgtttatcgcgtgatgttgaaacattaatcgtaacattacaaacgccataacatcttacagaacatattaa 16383759  T
Q  200 aacaagtgcgctagaatt 217  Q
    ||||||||||||||||||    
T  16383758 aacaagtgcgctagaatt 16383741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 60 - 217
Target Start/End: Complemental strand, 8163791 - 8163634
Alignment:
Q  60 caccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacg 159  Q
    ||||||||||||| |||||||||| |||||||||| ||||| ||||||||| |||||||||||||||| |||||||  ||||| ||||||||||||||||    
T  8163791 caccgaactgggttaacaaactcactgtgttctttactttcttgtcatttattttcttgtttttatttttgtttatcgcgtgatgttggaacattgaacg 8163692  T
Q  160 gaatattgttaacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 217  Q
     || ||  | ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8163691 taacatcataaacgttaaaacatcatacataacgtattaaaacaagtgcgctagaatt 8163634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 15162579 - 15162795
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||| | | |||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||  ||| |||||    
T  15162579 aggactacactagtggatttccttcttgggttggcagcccccagagtaggtgtgtttgtcaccgaactaggtcaacaaacttattgtgtcttttactttc 15162678  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    ||| |||||| |||||||||||||||| ||||||     ||| ||||||||||| | || || || |  |||||| ||||||| ||||||||||||||||    
T  15162679 ctgccatttattttcttgtttttatttctgtttacactatgatgttggaacattaatcgaaacatcgcaaacgttgaaacatcttacataacatattaaa 15162778  T
Q  201 acaagtgcgctagaatt 217  Q
    ||||||  |||||||||    
T  15162779 acaagtatgctagaatt 15162795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 21478175 - 21477960
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||| ||||||||||| ||||||||||| ||||||||||||   ||| ||||||||||||| ||||||||||  ||||||||| |||||    
T  21478175 aggactacactagtgtatttccttcctggcttggtagcctccagagtaggtgacgttg-caccgaactgggttaacaaactcaccgtgttctttactttc 21478077  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
     ||||||||| |||||||||||||||| || ||||  ||||| |||||||||||||| |  | ||    ||| ||||||||||||||| ||| |||||||    
T  21478076 ttgtcatttattttcttgtttttatttctggttatcgcgtgatgttggaacattgaatgtgacatcacaaacattaaaacatcatacagaacgtattaaa 21477977  T
Q  201 acaagtgcgctagaatt 217  Q
    |||||||||||||||||    
T  21477976 acaagtgcgctagaatt 21477960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 15700402 - 15700604
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagccccca-gagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttcttt 99  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||            
T  15700402 aggactacactagtggatttccttcctggcttggtagcccccaagagtaggtgtgtttgtcaccgaactgggtcaacaaactcactgtgttc-------- 15700493  T
Q  100 cctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaa 199  Q
           ||||||||||||||||||||| |||||| ||||||| |||||||||||||||  || ||| | ||| || ||||||| |||| ||||| ||||    
T  15700494 -------tttactttcttgtttttatttctgtttaattcgtgatgttggaacattgaacaaaacattataaacattgaaacatcttacaaaacattttaa 15700586  T
Q  200 aacaagtgcgctagaatt 217  Q
    |||||||  |||||||||    
T  15700587 aacaagtatgctagaatt 15700604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 28019372 - 28019259
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||| | |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  28019372 aggactacactagtggatttccttcttggcttggtagcccccagagcatgtgtgtttgtcaccgaactgggtcaacaaactcattgtgttatttactttc 28019273  T
Q  101 ctgtcatttacttt 114  Q
    ||||||||||||||    
T  28019272 ctgtcatttacttt 28019259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 33899080 - 33899189
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||  |||||||| ||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33899080 aggactacaccagtggattttcttcctgacttggtagcccctagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttc 33899179  T
Q  101 ctgtcattta 110  Q
    ||||||||||    
T  33899180 ctgtcattta 33899189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 18618208 - 18618422
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||  ||| |||||||||||| | |||||||| |||||    
T  18618208 aggactacactagtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccgacttggctcaacaaactcactatgttctttactttc 18618307  T
Q  101 ctgtcattta-ctttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacg-ttaaaacatcatacataacatatta 198  Q
     |||| ||||  |||||||||| ||||  || ||||  ||| | |||| |||||||||| ||| |    ||||| ||||||||| | ||| |||||||||    
T  18618308 ttgtcgtttatttttcttgtttatattactggttatcgcgtaatgttgaaacattgaacagaaca----taacgcttaaaacattacacagaacatatta 18618403  T
Q  199 aaacaagtgcgctagaatt 217  Q
    ||||||||| |||||||||    
T  18618404 aaacaagtgtgctagaatt 18618422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 23400286 - 23400412
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  23400286 aggactacactagtggatttccttcctggcttggtagccc------taggtgtgtttgtcaccgaactaggtcaacaaactcattgtgttctttactttc 23400379  T
Q  101 ctgtcattta-ctttcttgtttttatttatgtt 132  Q
     |||| ||||  |||||||||||||||||||||    
T  23400380 atgtcttttatttttcttgtttttatttatgtt 23400412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 13399395 - 13399477
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactca 83  Q
    ||||||||||| |||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13399395 aggactacactagtggattttcttcctggcttggtagcccctagagtaggtgtgtttgtcaccgaactgggtcaacaaactca 13399477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9069013 - 9068933
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 81  Q
    ||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||| ||||||||    
T  9069013 aggactacactagtggatttccttcctcgcttggtagcctccagagtaggtgtgtttgttaccgaactgggttaacaaact 9068933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 33738050 - 33737973
Alignment:
Q  2 ggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 79  Q
    |||||||||| ||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||| ||||||    
T  33738050 ggactacactagtggatttccttcctggcttggtagcctccatagtaggtgtgtttgtcaccgaactgggttaacaaa 33737973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 33746031 - 33745951
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 81  Q
    ||||||||||| ||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| || ||||||||    
T  33746031 aggactacactagtggatttccttcctagcttggtagcctccatagtaggtgtttttgtcaccgaactgtgttaacaaact 33745951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 2679917 - 2679839
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 79  Q
    ||||||||| | |||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||| ||||||    
T  2679917 aggactacaatagtggatttccttcctaacttggttgcccccagagtaggtgtgtttgtcaccgtactgggttaacaaa 2679839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 32861715 - 32861637
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 79  Q
    ||||||||||| |||||||| ||||||  |||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  32861715 aggactacactagtggattttcttcctgacttggtagcccctagagtaggtgtgtttgtcaccgaactggatcaacaaa 32861637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 41785501 - 41785421
Alignment:
Q  2 ggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 82  Q
    |||||||||| ||||||||||||| | ||||||||||||||  |||| ||||||||||||| |||||||||||||||||||    
T  41785501 ggactacactagtggatttccttcttggcttggtagcccccgtagtatgtgtgtttgtcacagaactgggtcaacaaactc 41785421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 50907919 - 50907840
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaac 80  Q
    ||||||||||| |||||||| ||||||  ||||||||||| |||||||||||||||||||||||||||| || |||||||    
T  50907919 aggactacactagtggattttcttcctgacttggtagccctcagagtaggtgtgtttgtcaccgaactgagttaacaaac 50907840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 19659506 - 19659432
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaa 75  Q
    ||||||||||| ||||||||||||||| ||||||| ||||||||  |||||||||||||||||||| ||||||||    
T  19659506 aggactacactagtggatttccttcctggcttggtggcccccagcttaggtgtgtttgtcaccgaattgggtcaa 19659432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10198342 - 10198418
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    ||||||||||| ||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||| ||| |||||    
T  10198342 aggactacactggtggatttccttcctggcttggtag-ccctagagtaggtgtgtttgtcaccgaactaggttaacaa 10198418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 25354730 - 25354814
Alignment:
Q  4 actacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgt 89  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||   ||| ||||||||||||| |||||||||| |||||    
T  25354730 actacactagtggatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactcactgtgt 25354814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 23541310 - 23541225
Alignment:
Q  2 ggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtg 88  Q
    |||||||||| ||||||||||||||| ||||||||||| ||||||||||||   ||| ||||||||||||| |||||||||| ||||    
T  23541310 ggactacactagtggatttccttcctggcttggtagcctccagagtaggtgacgttg-caccgaactgggttaacaaactcactgtg 23541225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 22555037 - 22554950
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgt 89  Q
    ||||||||||| ||||||||||||||| |||||||||||  |||||||||||   ||| ||||||||||||| |||||||||| |||||    
T  22555037 aggactacactagtggatttccttcctggcttggtagccttcagagtaggtgacgttg-caccgaactgggttaacaaactcactgtgt 22554950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 46741841 - 46741927
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtg 88  Q
    |||| |||||| ||||||||||||| | ||||||||||||||||||||||||   ||| ||||||| ||||| |||||||||||||||    
T  46741841 aggattacactagtggatttccttcatggcttggtagcccccagagtaggtgacgttg-caccgaaatgggttaacaaactcattgtg 46741927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 24143201 - 24143122
Alignment:
Q  2 ggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 82  Q
    |||||||||| |||||||||||||||  |||||||||||||||||||||||   ||| ||||||||| ||| |||||||||    
T  24143201 ggactacactagtggatttccttcctgacttggtagcccccagagtaggtgacgttg-caccgaactaggttaacaaactc 24143122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 11325237 - 11325288
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtg 52  Q
    ||||||||||| ||||||||||||||| ||||||||||| |||||| |||||    
T  11325237 aggactacactagtggatttccttcctggcttggtagcctccagagcaggtg 11325288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 26244988 - 26245034
Alignment:
Q  33 ggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 79  Q
    ||||||| ||||||||||||||||| |||||||||||||| ||||||    
T  26244988 ggtagcctccagagtaggtgtgtttttcaccgaactgggttaacaaa 26245034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16655430 - 16655507
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    |||||||| || ||||||||||||| | ||||| ||||||| ||||||||||||||| || | ||||| ||| |||||    
T  16655430 aggactaccctagtggatttccttcttggcttgttagcccctagagtaggtgtgtttatcgctgaactaggttaacaa 16655507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 13268902 - 13268835
Alignment:
Q  13 gtggatttccttcctagcttggtagcccccaga-gtaggtgtgtttgtcaccgaactgggtcaacaaac 80  Q
    |||||||||||||||  |||||||||||||||| |||||||   ||| ||||||||||||| |||||||    
T  13268902 gtggatttccttcctgacttggtagcccccagatgtaggtgaagttg-caccgaactgggtgaacaaac 13268835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 13399576 - 13399624
Alignment:
Q  169 taacgttaaaacatcatacataacatattaaaacaagtgcgctagaatt 217  Q
    ||||||||||||||   ||||||||| ||||||||||| ||||||||||    
T  13399576 taacgttaaaacattgcacataacatcttaaaacaagtacgctagaatt 13399624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 33899450 - 33899490
Alignment:
Q  177 aaacatcatacataacatattaaaacaagtgcgctagaatt 217  Q
    |||||||||||| ||| |||||||||||||| |||||||||    
T  33899450 aaacatcatacagaacctattaaaacaagtgtgctagaatt 33899490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 124; Significance: 1e-63; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 18217 - 18437
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccc-cagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttcttt 99  Q
    ||||||||||| ||||||||||||| | |||| |||||||| ||||||||||||||||||||||||||| |||||||||||||| | |||||||| ||||    
T  18217 aggactacactagtggatttccttcttggcttcgtagccccccagagtaggtgtgtttgtcaccgaactaggtcaacaaactcactatgttctttacttt 18316  T
Q  100 cctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaa 199  Q
    | ||||||||| |||||||||||||||| ||||||  |||||| |||||||| |||||||| | ||||  |||||||||||||| |||| ||||||||||    
T  18317 cttgtcatttattttcttgtttttatttttgttta--tcgtgatgttggaacgttgaacgggacattgcaaacgttaaaacatcttacagaacatattaa 18414  T
Q  200 aacaagtgcgctagaattacaga 222  Q
    |||||||||||||||||| ||||    
T  18415 aacaagtgcgctagaatttcaga 18437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 27611 - 27831
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccc-cagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttcttt 99  Q
    ||||||||||| ||||||||||||| | |||| |||||||| ||||||||||||||||||||||||||| |||||||||||||| | |||||||| ||||    
T  27611 aggactacactagtggatttccttcttggcttcgtagccccccagagtaggtgtgtttgtcaccgaactaggtcaacaaactcactatgttctttacttt 27710  T
Q  100 cctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaa 199  Q
    | ||||||||| |||||||||||||||| ||||||  |||||| |||||||| |||||||| | ||||  |||||||||||||| |||| ||||||||||    
T  27711 cttgtcatttattttcttgtttttatttttgttta--tcgtgatgttggaacgttgaacgggacattgcaaacgttaaaacatcttacagaacatattaa 27808  T
Q  200 aacaagtgcgctagaattacaga 222  Q
    |||||||||||||||||| ||||    
T  27809 aacaagtgcgctagaatttcaga 27831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 7631 - 7847
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||| ||||||||||| ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| |||||||||| |||||    
T  7631 aggactacactagtgaatttccttcctggcttggtagcccctagagtaagtgtgtttgtcaccgaactaggtcaacaaactcactgtgttctttactttc 7730  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
     ||| ||||| |||||||||||||||| ||||||| ||||||  ||||||||||||||   | ||||  ||||||||| |||| |||| |||||||||||    
T  7731 ttgtaatttattttcttgtttttatttctgtttatctcgtgatattggaacattgaacatgacattgcaaacgttaaatcatcttacagaacatattaaa 7830  T
Q  201 acaagtgcgctagaatt 217  Q
    |||||||||||||||||    
T  7831 acaagtgcgctagaatt 7847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 121; Significance: 7e-62; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 25765 - 25981
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||  ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||    
T  25765 aggactacaccagtggatttccttcctggcttggtagctcccagagtaggtgtgtttgtcaccgaactgggtcaataaactcattgtgttatttactttc 25864  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    |||||||||| ||||||||||||||||||||||||  ||||| |||| |||||| | || |  ||||  |||| | |||||||||||| ||| |||||||    
T  25865 ctgtcatttattttcttgtttttatttatgtttatcgcgtgatgttgaaacattaatcgtagcattgcaaacgctgaaacatcatacagaacgtattaaa 25964  T
Q  201 acaagtgcgctagaatt 217  Q
    |||||| ||||||||||    
T  25965 acaagtacgctagaatt 25981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 7e-62; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 13735065 - 13735281
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    |||||||||||  ||||||||||||||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||  ||| |||||    
T  13735065 aggactacactaatggatttccttcctgacttggtaacccccagagtaggtgtgtttgtcaccgaagtgggtcaacaaactcactgtgtcttttactttc 13735164  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    |||||||||| |||||||||||||||| |||||| ||||||| ||||||||||||||||||| ||| | |||||| |||||||   || |||||||||||    
T  13735165 ctgtcatttattttcttgtttttatttctgtttacttcgtgatgttggaacattgaacggaacattataaacgttgaaacatctcgcagaacatattaaa 13735264  T
Q  201 acaagtgcgctagaatt 217  Q
    |||||| | ||||||||    
T  13735265 acaagttcactagaatt 13735281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 30605782 - 30605995
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    |||||| |||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  30605782 aggactgcactagtggatttccttcctggattggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcactgtgttctttactttc 30605881  T
Q  101 ctgtcatttactttcttg-tttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaa 199  Q
     |||| |||| ||||||| ||||||| | |||||||||||| | ||||||||||||||||||| |   |||||||| ||||||| |||| ||||||||||    
T  30605882 ttgtctttta-tttcttgttttttatctctgtttatttcgtaatgttggaacattgaacggaaca---ttaacgttgaaacatcttacagaacatattaa 30605977  T
Q  200 aacaagtgcgctagaatt 217  Q
    |||||||||| |||||||    
T  30605978 aacaagtgcgttagaatt 30605995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 26036878 - 26036677
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||| | |||| ||| |||||    
T  26036878 aggacaacactagtggatttccttcctggcttggtagcccccagagtaggtgtgttttccaccgaactgggtcaacaaactcactttgttgtttactttc 26036779  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
     ||||||||| |||||| ||||||||| |||||||||||||| |||||||||| ||||| || ||| | |||||| ||||||| |||| |||||||||||    
T  26036778 ttgtcatttattttcttatttttatttttgtttatttcgtgatgttggaacatcgaacgaaacattataaacgttgaaacatcttacagaacatattaaa 26036679  T
Q  201 ac 202  Q
    ||    
T  26036678 ac 26036677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 22404853 - 22405069
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||| ||| ||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  22404853 aggactatactagtggatttccttcctggcttggtagcccctagagcaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttatttactttc 22404952  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    || ||||||| |||||||||||| ||| |||||||  | ||| |||| |||||| | || || ||||  || | | |||||||||||||||| |||||||    
T  22404953 ctttcatttattttcttgtttttgtttctgtttatcgcatgatgttgaaacattaatcgtaacattgcaaatgctgaaacatcatacataacctattaaa 22405052  T
Q  201 acaagtgcgctagaatt 217  Q
    ||||||| |||||||||    
T  22405053 acaagtgtgctagaatt 22405069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 9422559 - 9422781
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccaga-gtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttcttt 99  Q
    ||||| ||||| |||||||||||||||  ||||| || ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  9422559 aggacaacactagtggatttccttcctgacttgg-agtccccagatgtaggtgtgtttgtcaccgaactaggtcaacaaactcattgtgttctttacttt 9422657  T
Q  100 cctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaa 199  Q
     ||||| |||| |||||||||||||||| |||||||   |||| ||||||||| | ||||||| ||||  || |||||||||||  ||| ||||||||||    
T  9422658 tctgtcgtttattttcttgtttttatttctgtttatcatgtgatgttggaacactaaacggaacattgcaaatgttaaaacatctgacagaacatattaa 9422757  T
Q  200 aacaagtgcgctagaattacagat 223  Q
    ||||||||| |||||||| |||||    
T  9422758 aacaagtgcactagaatttcagat 9422781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 23420653 - 23420779
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||| ||||||||||||| || || |||||    
T  23420653 aggactacactagtggatttccttcctagcttggtagcccttagagtaggtgtatttgtcaccgaactgggtcagcaaactcattgtgctccttactttc 23420752  T
Q  101 ctgtcatttactttcttgtttttattt 127  Q
    |||||||||| ||||||||||||||||    
T  23420753 ctgtcatttattttcttgtttttattt 23420779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 25105512 - 25105729
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| |||||||||||||||  |||||||||||| || ||||||| | ||||||||||||||||||||||| |||| ||||||||||  ||||    
T  25105512 aggactacactagtggatttccttcctgacttggtagcccctagtgtaggtgcgcttgtcaccgaactgggtcaacaagctcactgtgttctttagtttc 25105611  T
Q  101 ctgtcattta-ctttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaa 199  Q
    || || ||||  |||||||||||||||| |||||||   |||| |||| |||||| | || || ||||  ||||    ||||||||||| ||||||||||    
T  25105612 ctatcttttatttttcttgtttttatttctgtttatcgtgtgatgttgaaacattaatcgtaacattgcaaacgccgtaacatcatacagaacatattaa 25105711  T
Q  200 aacaagtgcgctagaatt 217  Q
    ||||||||||||||||||    
T  25105712 aacaagtgcgctagaatt 25105729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 25164605 - 25164822
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| |||||||||||||||  |||||||||||| || ||||||| | ||||||||||||||||||||||| |||| ||||||||||  ||||    
T  25164605 aggactacactagtggatttccttcctgacttggtagcccctagtgtaggtgcgcttgtcaccgaactgggtcaacaagctcactgtgttctttagtttc 25164704  T
Q  101 ctgtcattta-ctttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaa 199  Q
    || || ||||  |||||||||||||||| |||||||   |||| |||| |||||| | || || ||||  ||||    ||||||||||| ||||||||||    
T  25164705 ctatcttttatttttcttgtttttatttctgtttatcgtgtgatgttgaaacattaatcgtaacattgcaaacgccgtaacatcatacagaacatattaa 25164804  T
Q  200 aacaagtgcgctagaatt 217  Q
    ||||||||||||||||||    
T  25164805 aacaagtgcgctagaatt 25164822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 26329305 - 26329521
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||  ||||||||||||||| |||||||||| | |||||||||||||||| ||||||||||||||||||||||||| |||||| ||| | |||    
T  26329305 aggactacaccagtggatttccttcctggcttggtagctcacagagtaggtgtgtttatcaccgaactgggtcaacaaactcactgtgtt-tttaccttc 26329403  T
Q  101 ctgtcattta-ctttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaa 199  Q
     |||||||||  |||||||||||||||| |||||| ||| ||| ||||||||||||| |  || ||| | |||||  || ||||  |   ||||||||||    
T  26329404 ttgtcatttatttttcttgtttttatttctgtttacttcatgatgttggaacattgagcataacattataaacgtcgaaccatctcatggaacatattaa 26329503  T
Q  200 aacaagtgcgctagaatt 217  Q
    ||||||| ||||||||||    
T  26329504 aacaagtacgctagaatt 26329521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 18221178 - 18220971
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||| | ||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||  |||||             
T  18221178 aggactacactagtggatttccttcttggcttggtagaccccaaagtaggtgtgtttgtcaccgaactggatcaacaaactcatcttgttc--------- 18221088  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
          ||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||| ||| | ||| || ||||||| |||  ||| | |||||    
T  18221087 ------tttactttcttgtttttatttctgtttaattcgtgatgttggaacattgaacggaacattataaacattgaaacatcttacgaaactttttaaa 18220994  T
Q  201 acaagtgcgctagaattacagat 223  Q
    |||||| |||||||||| |||||    
T  18220993 acaagtacgctagaatttcagat 18220971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 24189928 - 24189808
Alignment:
Q  3 gactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcct 102  Q
    ||||||||| ||| ||||||||||  |||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||| |||||||    
T  24189928 gactacactagtgaatttccttcccggcttggtagcccccagagtatgtgtgtttgtcaccgaactaggtcaacaaactcactgtgttctttactttcct 24189829  T
Q  103 gtcatttactttcttgttttt 123  Q
    ||| |||| ||||||||||||    
T  24189828 gtcttttattttcttgttttt 24189808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 23623943 - 23623846
Alignment:
Q  3 gactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||    
T  23623943 gactacactagtggatttccttcctaggttagtagcccccagagtaggtgtgtttgtcaccgaaataggtcaacaaactcattgtgttctttactttc 23623846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 13338659 - 13338543
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    |||| |||||| ||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||| |||||||||| |||||||||| |||||    
T  13338659 aggattacactagtggatttccttcctggcttggtagcccc-agagtatgtgtgtttgtcaccgaactgggttaacaaactcactgtgttctttactttc 13338561  T
Q  101 ctgtcatttactttcttg 118  Q
     |||| |||| |||||||    
T  13338560 ttgtcttttattttcttg 13338543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 20845886 - 20846018
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| |||||||||||||||  |||||||||||||| ||||||||   ||| ||||||||||||| |||||||||  ||||   ||| |||||    
T  20845886 aggactacactagtggatttccttcctgacttggtagcccccatagtaggtgacgttg-caccgaactgggttaacaaactctgtgtgccttttactttc 20845984  T
Q  101 ctgtcatttactttcttgtttttatttatgttta 134  Q
    |||||||||| |||||||||||||||| ||||||    
T  20845985 ctgtcatttattttcttgtttttatttttgttta 20846018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 20714828 - 20714910
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactca 83  Q
    ||||||||||| ||||||||||| |||  ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  20714828 aggactacactagtggatttcctacctgacttggtagccctcagagtaggtgtgtttgtcaccgaactaggtcaacaaactca 20714910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13942089 - 13942166
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    ||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  13942089 aggactacactagtggatttccttcctgacttggtagcccccagagtaggtgtgtttgtcaccgaactaggttaacaa 13942166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 17661502 - 17661583
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 82  Q
    ||||| ||||| ||| ||||||||||  ||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  17661502 aggacaacactagtgaatttccttccaggcttggtagcccccatagtaggtgtgtttgtcaccgaactgggttaacaaactc 17661583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 24117663 - 24117586
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    ||||||||||| ||||||||| ||||| ||||||||||| |||||||||| ||||||||||||||||||||| |||||    
T  24117663 aggactacactagtggatttcattcctggcttggtagccaccagagtaggcgtgtttgtcaccgaactgggttaacaa 24117586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 7898006 - 7898093
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgt 89  Q
    ||||||||||| ||||||||||||||| ||||||||||| ||||||||||||   ||| ||||||||||||| |||||||||| |||||    
T  7898006 aggactacactagtggatttccttcctggcttggtagcctccagagtaggtgacgttg-caccgaactgggttaacaaactcactgtgt 7898093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 17920876 - 17920961
Alignment:
Q  2 ggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtg 88  Q
    |||||||||| ||||||||||||||| ||||||||||||| ||||||||||   ||| ||||||||||||| |||||||||| ||||    
T  17920876 ggactacactagtggatttccttcctggcttggtagcccctagagtaggtgacgttg-caccgaactgggttaacaaactcactgtg 17920961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22979812 - 22979736
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    ||||||||||| ||| |||| |||||| ||||||||||||| | |||||||||||||||||||||||||||| |||||    
T  22979812 aggactacactagtgtatttgcttccttgcttggtagcccc-atagtaggtgtgtttgtcaccgaactgggttaacaa 22979736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 26183326 - 26183406
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 82  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||||||||||||   ||| ||||||||||||| |||||||||    
T  26183326 aggactacactagtgtatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 26183406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 20741028 - 20741079
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtg 52  Q
    ||||||||||| |||||||||| |||| ||||||||||||||||||||||||    
T  20741028 aggactacactagtggatttccctcctcgcttggtagcccccagagtaggtg 20741079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 11204777 - 11204712
Alignment:
Q  13 gtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 79  Q
    ||||||||||||||| ||||||||||||||||||||||||   ||| ||||||||||||| ||||||    
T  11204777 gtggatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaa 11204712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 22130926 - 22131005
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactc 82  Q
    |||| |||||| ||||||||||| ||| ||||||||||||||||||||||||   ||| ||||||||||||| |||||||||    
T  22130926 aggattacactagtggatttcct-cctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactc 22131005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 20498245 - 20498332
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgt 89  Q
    ||||||||||  |||||||||||||||  |||||||||| ||||||||||||   ||| ||||||||||||| |||||| ||| |||||    
T  20498245 aggactacacgagtggatttccttcctgacttggtagcctccagagtaggtgacgttg-caccgaactgggttaacaaattcactgtgt 20498332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 22184702 - 22184805
Alignment:
Q  14 tggatttccttcctagcttggtagcccccaga-gtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctgtcatttact 112  Q
    |||||||||||||| ||||||||||||| ||| ||||||| | ||||  ||||||||||  |||||||||  ||||   ||| ||||| |||||||||||    
T  22184702 tggatttccttcctggcttggtagcccctagatgtaggtgag-ttgt-gccgaactgggataacaaactctctgtgccgtttactttcttgtcatttact 22184799  T
Q  113 ttcttg 118  Q
    ||||||    
T  22184800 ttcttg 22184805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 7e-62; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 12910557 - 12910341
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||  |||     
T  12910557 aggactacacttgtggatttccttcctggcttggtagcccccagagtaggtatgtttgtcaccgaactgggtcaacaaactcactgtgttctttaatttt 12910458  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    |||||||||| |||||||||||||||| |||||||  ||||| |||| ||| || | || || ||||  |||| | |||||||||||| ||| |||||||    
T  12910457 ctgtcatttattttcttgtttttatttctgtttatcgcgtgatgttgaaactttaatcgtaacattgcaaacgctgaaacatcatacagaacgtattaaa 12910358  T
Q  201 acaagtgcgctagaatt 217  Q
    |||||||||||| ||||    
T  12910357 acaagtgcgctaaaatt 12910341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 23758693 - 23758477
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23758693 aggactacactagtggatttccttcctggcttggtagcccccagagtagttgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttc 23758594  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    ||||| |||| |||||||||||||||| |||||||  ||||| |||| |||||| | || || ||||  |||  | |||||||||||| |||  ||||||    
T  23758593 ctgtcttttattttcttgtttttatttctgtttatcgcgtgatgttgaaacattaatcgtaacattgcaaacactgaaacatcatacaaaactaattaaa 23758494  T
Q  201 acaagtgcgctagaatt 217  Q
    ||||||| |||||||||    
T  23758493 acaagtgtgctagaatt 23758477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 36398886 - 36399019
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  36398886 aggactacactagtggatttccttcctggcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgcgttctttactttc 36398985  T
Q  101 ctgtcatttactttcttgtttttatttatgttta 134  Q
    ||||| |||| |||||||||||||||| ||||||    
T  36398986 ctgtcgtttattttcttgtttttatttctgttta 36399019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 24790250 - 24790403
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    |||||||| || |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24790250 aggactactctagtggatttccttcctgacttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttc 24790349  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacatt 154  Q
    ||||| |||| |||||||||||||||| ||| |||  ||||| |||| ||||||    
T  24790350 ctgtcttttattttcttgtttttatttctgtctatcgcgtgatgttgaaacatt 24790403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 22610960 - 22610744
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| |||||||||||||||  ||||||  ||||    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22610960 aggactacactagtggatttccttcctttcttggtttccccttttgtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttactttc 22610861  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    ||||| |||| |||||||||||||||| |||||||  ||||| |||| |||||| | || |||||||  |||     ||||||||||| |||||||||||    
T  22610860 ctgtcttttattttcttgtttttatttctgtttatcgcgtgatgttgaaacattaatcgtaatattgcaaactccgtaacatcatacagaacatattaaa 22610761  T
Q  201 acaagtgcgctagaatt 217  Q
    | |||||||||||||||    
T  22610760 ataagtgcgctagaatt 22610744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 21250302 - 21250407
Alignment:
Q  15 ggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaact-gggtcaacaaactcattgtgttcttttctttcctgtcatttactt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||   ||| ||||| ||||||||| ||    
T  21250302 ggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactggggtcaacaaactcactgtgccttttactttcttgtcatttattt 21250401  T
Q  114 tcttgt 119  Q
     |||||    
T  21250402 acttgt 21250407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 19466614 - 19466696
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactca 83  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || |||||||    
T  19466614 aggactacactagtggatttccttcctggcttggtagcccccagagtaggtgtgtttatcaccgaactgggttaagaaactca 19466696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 12952540 - 12952462
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 79  Q
    ||||||||||| |||||||||||||||  |||||||||| ||| |||||||||||||||||||||||||||| ||||||    
T  12952540 aggactacactagtggatttccttcctgacttggtagcctccatagtaggtgtgtttgtcaccgaactgggttaacaaa 12952462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31587543 - 31587467
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    ||||||||||| ||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||| |||||    
T  31587543 aggactacactagtggatttccttcctggcttggtagctcc-agagtaggtgtgtttgtcaccgaactgggttaacaa 31587467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 24317901 - 24317981
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccaga-gtaggtgtgtttgtcaccgaactgggtcaacaaac 80  Q
    ||||||||||| ||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| ||||| |||||||    
T  24317901 aggactacactagtggatttccttcctggcttggtaacccccagatgtaggtgtgtttgtcaccgaattgggttaacaaac 24317981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 20649648 - 20649727
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaac 80  Q
    ||||||||||| |||||||||||||||  ||| |||||||| |||||||||||||||||| ||||||||||| |||||||    
T  20649648 aggactacactagtggatttccttcctgactttgtagcccctagagtaggtgtgtttgtccccgaactgggttaacaaac 20649727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 21530450 - 21530331
Alignment:
Q  4 actacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctg 103  Q
    |||||||| ||||||||||||| | ||||||||||||| ||||||||  |||||||||||||||||| | ||||||||| |||||   ||| ||||| ||    
T  21530450 actacactagtggatttccttcttggcttggtagcccctagagtaggcatgtttgtcaccgaactggataaacaaactcgttgtgccatttactttcttg 21530351  T
Q  104 tcattta-ctttcttgtttt 122  Q
    |||||||  |||||||||||    
T  21530350 tcatttatttttcttgtttt 21530331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 18765743 - 18765662
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactca 83  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||   ||| ||||||||||||| ||||||||||    
T  18765743 aggactacactagtggatttccttcctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactca 18765662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 22582481 - 22582363
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttt-cttt 99  Q
    ||||||||||| ||| |||| |||||| |||||||||| ||   ||||||||||||||||| ||||||| ||||||||||||  |||||| |||| ||||    
T  22582481 aggactacactagtgtattttcttccttgcttggtagctcctgtagtaggtgtgtttgtcatcgaactgagtcaacaaactctctgtgtttttttacttt 22582382  T
Q  100 cctgtcatttactttcttg 118  Q
    | ||||||||| |||||||    
T  22582381 cttgtcatttattttcttg 22582363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 27111147 - 27111071
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    ||||||||||| ||||| ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||| |||||    
T  27111147 aggactacactagtggacttccttcctggcttggtagcccc-agagtaggtgtgtttgtcaccgatctgggttaacaa 27111071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 24283620 - 24283688
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactg 69  Q
    ||||||||||| || ||||||||||||  |||||||||||||||| |||||||||||||||||||||||    
T  24283620 aggactacactagtagatttccttcctgacttggtagcccccagaataggtgtgtttgtcaccgaactg 24283688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 25347261 - 25347199
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcacc 63  Q
    ||||||||||| |||| ||||||| || |||||||||||||||||||||||||||||||||||    
T  25347261 aggactacactagtgggtttcctttctggcttggtagcccccagagtaggtgtgtttgtcacc 25347199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 19198370 - 19198431
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcacc 63  Q
    ||||||||||| ||||||||||||||| ||||| ||| |||||||||||||||||||||||||    
T  19198370 aggactacactagtggatttccttcctggcttgatag-ccccagagtaggtgtgtttgtcacc 19198431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 24317280 - 24317361
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagccccc-aga-gtaggtgtgtttgtcaccgaactgggtcaacaaac 80  Q
    ||||||||||| ||||||||||||  || ||||||||||||| ||| |||||||||||||||||||||||| || |||||||    
T  24317280 aggactacactagtggatttcctttataacttggtagccccccagatgtaggtgtgtttgtcaccgaactgagttaacaaac 24317361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 26860388 - 26860432
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccaga 45  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||    
T  26860388 aggactacactagtggatttccttcctggcttggtagcccccaga 26860432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 29566079 - 29565977
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| ||||||||| |||||||||||| |   ||| || ||||||| || |||||||||| ||||   |||||||||    
T  29566079 aggactacactagtggatttccttcctggcttggtag-ccccagagtaggggacgttg-catcgaactgagttaacaaactcactgtgccattttctttc 29565982  T
Q  101 ctgtc 105  Q
    |||||    
T  29565981 ctgtc 29565977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 20475367 - 20475446
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaac 80  Q
    ||||||||||| ||| ||||| ||||| ||||||| ||||||| || |||  |||||||||||||| ||||| |||||||    
T  20475367 aggactacactagtgaatttctttcctggcttggttgcccccaaagcaggcatgtttgtcaccgaattgggttaacaaac 20475446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 23801910 - 23801969
Alignment:
Q  13 gtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggt 72  Q
    ||||||||| ||||| ||||||||||||||  |||| |||||||| ||||||||||||||    
T  23801910 gtggatttcattccttgcttggtagccccccaagtatgtgtgtttctcaccgaactgggt 23801969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15328376 - 15328326
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggt 51  Q
    |||||||||||  |||||||||||| | |||||||||||||||||||||||    
T  15328376 aggactacactaatggatttccttcttggcttggtagcccccagagtaggt 15328326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 13315057 - 13315161
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtag-cccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttcttt 99  Q
    ||||||||||| |||||||| |||||| |||| |||| |||||| ||||||||   ||| ||||||||||||| |||||||||| | ||   ||||||||    
T  13315057 aggactacactagtggattttcttcctggcttagtagccccccatagtaggtgacattg-caccgaactgggttaacaaactcactttgccattttcttt 13315155  T
Q  100 cctgtc 105  Q
    ||||||    
T  13315156 cctgtc 13315161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 20476668 - 20476720
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgt 53  Q
    ||||||||||  ||| ||||||||||||||||||||||||||| |||| ||||    
T  20476668 aggactacaccagtgaatttccttcctagcttggtagcccccaaagtacgtgt 20476720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 17369 - 17585
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| |||||||| ||||||  |||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||| ||| |||||    
T  17369 aggactacactagtggattttcttcctgacttggtagcccccagagtaggtgtgtttgtcacgaaactgggtcaacaaactcactgtgttttttactttc 17468  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
     ||||||||| ||| ||| |||||||| |||||||  |||||  ||| |||||||||| ||| ||||  |||||||||||||| |||| |||||| ||||    
T  17469 ttgtcatttattttattgattttatttttgtttatcgcgtgattttgaaacattgaactgaacattgcaaacgttaaaacatcgtacagaacatactaaa 17568  T
Q  201 acaagtgcgctagaatt 217  Q
    |||||||||||||||||    
T  17569 acaagtgcgctagaatt 17585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 87803 - 87585
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccaga-gtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttcttt 99  Q
    ||||||||||| |||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  87803 aggactacactagtggatttccttcctagcttgg-agcccccatacgtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttctttacttt 87705  T
Q  100 cctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaa 199  Q
    || | |||||| |||||||||||||||| |||||||  ||||| ||||||||||| || |||| |||||  || |||| |||||  ||| ||||| ||||    
T  87704 cccgccatttattttcttgtttttatttctgtttatcacgtgatgttggaacattaaatggaacattgtagacattaatacatctgacagaacat-ttaa 87606  T
Q  200 aacaagtgcgctagaattaca 220  Q
    ||||||||| |||||||||||    
T  87605 aacaagtgcactagaattaca 87585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 110; Significance: 3e-55; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 50183 - 50400
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| |||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  50183 aggactacactagtggatttccttcctgacttggtagcccctagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttatttactttc 50282  T
Q  101 ctgtcatttactttcttg-tttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaa 199  Q
     ||||||||||||||||| ||||||||| |||||||  ||||| |||| |||||| | || || ||||  ||||    ||||||||||| ||| ||||||    
T  50283 atgtcatttactttcttgttttttatttctgtttatcgcgtgatgttgaaacattaatcgtaacattgcaaacgccttaacatcatacagaacgtattaa 50382  T
Q  200 aacaagtgcgctagaatt 217  Q
    |||||||| |||||||||    
T  50383 aacaagtgtgctagaatt 50400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 61568 - 61781
Alignment:
Q  4 actacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttcctg 103  Q
    |||||||| ||||||||||||| | ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| | ||| ||||||||    
T  61568 actacactagtggatttccttcttggcttggtagcccccagagtaa-tgtgtttgtcaccgaactgggtcaacaaactcattgtgctatttactttcctg 61666  T
Q  104 tcatttactttcttg-tttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaaac 202  Q
    ||||||||||||||| ||||||||| |||||||  ||||| |||| || ||| | || || ||||  ||||    ||||||||||| |||||||||||||    
T  61667 tcatttactttcttgttttttatttttgtttatcgcgtgatgttgaaatattaatcgtaacattgcaaacgccgtaacatcatacaaaacatattaaaac 61766  T
Q  203 aagtgcgctagaatt 217  Q
    || || |||||||||    
T  61767 aaatgtgctagaatt 61781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 106; Significance: 7e-53; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 110348 - 110557
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgttt-gtcaccgaactgggtcaacaaactcattgtgttcttttcttt 99  Q
    ||||||||||| |||||||||||||||  |||||||||||| |||||| |||||||| ||||||||||||| ||||||||||||||||||| ||| ||||    
T  110348 aggactacactagtggatttccttcctgacttggtagcccctagagtatgtgtgttttgtcaccgaactggttcaacaaactcattgtgttatttacttt 110447  T
Q  100 cctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaa 199  Q
    |||||||||||||||||||||||||||| |||||||   |||| |||| |||||| | || || ||||  | || | |||||||||||||||| ||||||    
T  110448 cctgtcatttactttcttgtttttatttctgtttatcgagtgatgttgaaacattaatcgtaacattgcaatcgctgaaacatcatacataacgtattaa 110547  T
Q  200 aacaagtgcg 209  Q
    ||||||||||    
T  110548 aacaagtgcg 110557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 2450 - 2671
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    |||||||||||  |||| ||||||||| ||||| ||||||| | |||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||    
T  2450 aggactacactattggacttccttcctggcttgatagcccctaaagtaggtgtgcttgtcaccgaaatgggtcaacaaactcattgtgttctttactttc 2549  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
    || ||||||| ||||||||||||||||||||||||  ||| | |||| ||||||    | ||  |||  |||| ||||| |||||||||||| |||||||    
T  2550 ctatcatttattttcttgtttttatttatgtttatcacgttaggttgaaacattagttgtaactttgcaaacgctaaaaaatcatacataacgtattaaa 2649  T
Q  201 acaagtgcgctagaattacaga 222  Q
    ||||||| ||||||||| ||||    
T  2650 acaagtgtgctagaatttcaga 2671  T

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Target: scaffold0190 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 16716 - 16932
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||| | |||||||||||| || |||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||    
T  16716 aggactacagtagtggatttcctttctggcttggtagcccccggagtaggtgtgtttgtcaccgaactgagtcaacaaactcactgtgttctttactttc 16815  T
Q  101 ctgtcatttactttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaaa 200  Q
     ||||||||| |||||||||||||||| || |||||||||||  ||| |||||| ||  | |  |||  || ||| |||||||  ||  |||||||||||    
T  16816 ttgtcatttattttcttgtttttatttctgcttatttcgtgatattgaaacattaaataggactttgcaaatgttgaaacatctcactgaacatattaaa 16915  T
Q  201 acaagtgcgctagaatt 217  Q
    |||||||||||| ||||    
T  16916 acaagtgcgctaaaatt 16932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 37073 - 36857
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  37073 aggactacactagtggatttccttcctggcttggtagcctccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgtt-tttactttc 36975  T
Q  101 ctgtcatttactttcttg-tttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatattaa 199  Q
    ||  | |||| ||||||| |||||| || |||||||  | |||  ||| |||||| | || || ||||  |||||   ||||||||| | ||||||||||    
T  36974 ctaacttttattttcttgttttttaattttgtttatcgcatgattttgaaacattaatcgtaacattgcaaacgtcgtaacatcatatagaacatattaa 36875  T
Q  200 aacaagtgcgctagaatt 217  Q
    ||||||||  ||||||||    
T  36874 aacaagtgtcctagaatt 36857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 16305 - 16521
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| ||| | ||   ||| ||||||||||||| |||||||||| |||||||||| |||||    
T  16305 aggactacactagtggatttccttcctggcttggtagcccccaaagtggttgacgttg-caccgaactgggttaacaaactcactgtgttctttactttc 16403  T
Q  101 ctgtcatttactttcttgtttttat--ttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatatta 198  Q
     ||||||||| |||||||||||| |  || |||||||  ||||| ||||||| ||| |||| || || |  ||||||||||||||||||||||| |||||    
T  16404 ttgtcatttattttcttgttttttttcttctgtttatcgcgtgatgttggaa-attaaacgtaacatcgcaaacgttaaaacatcatacataacgtatta 16502  T
Q  199 aaacaagtgcgctagaatt 217  Q
    |||||||||| || |||||    
T  16503 aaacaagtgcccttgaatt 16521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 5713 - 5496
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||    
T  5713 aggactacacttgtggatttccttccttgcttggtagccct-agagtaggtgtgtttgacaccgaactgggtcaacaaattcattgtgttctttactttc 5615  T
Q  101 ctgtcatttactttcttg--tttttatttatgtttatttcgtgacgttggaacattgaacggaatattgttaacgttaaaacatcatacataacatatta 198  Q
    ||||| |||| |||  ||  ||||||||| | |||||  ||||| |||| |||||| |  | || ||||  ||||    || |||||||| |||||||||    
T  5614 ctgtcttttattttgctgtttttttatttctatttatcgcgtgatgttgaaacattaattgtaacattgcaaacgccgtaatatcatacagaacatatta 5515  T
Q  199 aaacaagtgcgctagaatt 217  Q
    |||||||||||||| ||||    
T  5514 aaacaagtgcgctaaaatt 5496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 40402 - 40240
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||| |||||    
T  40402 aggactacactagtggatttccttcctagcttggtagcccccagagtaggtgtg-ttgtcactgaactgggtcaacaaactcactgtgttctttactttc 40304  T
Q  101 ctgtcatttact---ttcttgtttttatttatgtttatttcgtgacgttggaacattgaacggaa 162  Q
     | ||||||  |   ||||||||||||||| |||||| |   ||| ||||||||||| |||||||    
T  40303 ttatcattttttttcttcttgtttttattt-tgtttactgtttgatgttggaacattaaacggaa 40240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 36660 - 36598
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcacc 63  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  36660 aggactacactagtggatttccttcctagcttggtagcctccagagtaggtgtgtttgtcacc 36598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 3187 - 3111
Alignment:
Q  4 actacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaact 81  Q
    |||||||| ||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||| | ||||||||    
T  3187 actacactagtggatttccttcctggcttggtagcctccagagtaggtgtg-ttgtcaccgaactggattaacaaact 3111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 202463 - 202386
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    ||||||||||| |||||||||||||||  |||||||||||||||||||  ||||||||||| |||||||||| |||||    
T  202463 aggactacactagtggatttccttcctgacttggtagcccccagagtacttgtgtttgtcaacgaactgggttaacaa 202386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10127 - 10204
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    ||||||||||| |||||||||||| ||  |||||||||||| |||||| |||| |||||||||||||||||| |||||    
T  10127 aggactacactagtggatttcctttctgacttggtagccccaagagtaagtgtatttgtcaccgaactgggttaacaa 10204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 13672 - 13596
Alignment:
Q  4 actacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaac 80  Q
    ||||||||  || |||| |||||| ||||||||||||| |||||||||||||||||||||||||||| | |||||||    
T  13672 actacactaatgaattttcttcctggcttggtagcccctagagtaggtgtgtttgtcaccgaactggattaacaaac 13596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 53017 - 53102
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtg 88  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||||||||||||   ||| ||||||||||||| |||||||||| ||||    
T  53017 aggactacactagtggatttcct-cctggcttggtagcccccagagtaggtgacgttg-caccgaactgggttaacaaactcactgtg 53102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 36365 - 36264
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactcattgtgttcttttctttc 100  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||||||||   ||| ||||||||||| | |||||||||  ||||   |||||||||    
T  36365 aggactacactagtggattttcttcctggcttggtagcccccagagtaggtgacgttg-caccgaactggattaacaaactctctgtgcctttttctttc 36267  T
Q  101 ctg 103  Q
    |||    
T  36266 ctg 36264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 103173 - 103092
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactca 83  Q
    ||||||||||| ||||||||||||||| ||||||||||||| ||||||||||   ||| ||| ||||||||| ||||||||||    
T  103173 aggactacactagtggatttccttcctggcttggtagcccctagagtaggtgacgttg-cactgaactgggttaacaaactca 103092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 5486 - 5409
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    ||||||||||| |||||||||||| ||  |||   |||||| |||||||||||||||||||||||||||||| |||||    
T  5486 aggactacactagtggatttcctttctgacttaacagcccctagagtaggtgtgtttgtcaccgaactgggttaacaa 5409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37433 - 37357
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaa 78  Q
    ||||||||||| |||||||||||||||  |||||||| ||||| ||| ||||||| |||||||||||||||| |||||    
T  37433 aggactacactagtggatttccttcctgacttggtag-ccccatagtgggtgtgtctgtcaccgaactgggttaacaa 37357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 17064 - 17145
Alignment:
Q  1 aggactacacttgtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaactca 83  Q
    ||||||||||| ||||||||||||||| | |||||   ||||| ||||||||   ||| ||||||||||||| ||||||||||    
T  17064 aggactacactagtggatttccttcctggattggttagccccatagtaggtgacgttg-caccgaactgggttaacaaactca 17145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 18605 - 18540
Alignment:
Q  13 gtggatttccttcctagcttggtagcccccagagtaggtgtgtttgtcaccgaactgggtcaacaaa 79  Q
    ||||||||||||| | ||||||||||||| | ||||||||   ||| ||||||||||||||||||||    
T  18605 gtggatttccttcatggcttggtagccccaaaagtaggtgaagttg-caccgaactgggtcaacaaa 18540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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