View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7461_2D_low_16 (Length: 301)
Name: NF7461_2D_low_16
Description: NF7461_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7461_2D_low_16 |
 |  |
|
| [»] scaffold0190 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 8936180 - 8936463
Alignment:
| Q |
1 |
tggtttgatgtttatggtaatgattttggttggggaaagcctgtggcagttcgtagtggatatagaggaaatggacttattacggtttttgctggaatag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||| |||| |||| ||||||||| || ||||||||||||||| || ||||| ||||||| |
|
|
| T |
8936180 |
tggtttgatgtttatggtaatgattttggatggggaaagcctgtagcaggtcgtggtggatataaagcaaatggacttattacagtatttgccggaatag |
8936279 |
T |
 |
| Q |
101 |
aagaaggtagtatagatcttcaagtttgtctttcacatgagattttggaggcaatgggaaatgaccctcaattcatggatgttgattccaactaatgcaa |
200 |
Q |
| |
|
||||||||||||| || ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
8936280 |
aagaaggtagtattgaccttcaagtttgtcttccatatgagattttggaggcaatgggaaatgaccctcaattcatggatgttgcgtccaactaatgcaa |
8936379 |
T |
 |
| Q |
201 |
catgatgtgtgtaaaatcaatttggtacaatatcgttgaaatgcttgaatttgttttttgtgtgacaacccatgaataattttt |
284 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
8936380 |
catgatgtgtgtaaaatcaatttggtacaatatcgttgaaatgcttgaatttgttttttgtgtgacaacccttgaataattttt |
8936463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 233
Target Start/End: Original strand, 8913686 - 8913909
Alignment:
| Q |
3 |
gtttgatgtttatggtaatgattttggttggggaaagcctgtggcagttcgtagtggatatagaggaaatggacttattacggtttttgctggaatagaa |
102 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||| || |||| ||||||||| |
|
|
| T |
8913686 |
gtttgatgtttatggtaatgat-------ggggaaagcctgtggcagttcgtagtggatataaaataaatggacttattacagtatttgtcggaatagaa |
8913778 |
T |
 |
| Q |
103 |
gaaggtagtatagatcttcaagtttgtctttcacatgagattttggaggcaatgggaaatgaccctcaattcatggatgttgattccaactaatgcaaca |
202 |
Q |
| |
|
||||||| |||||| ||||||||||||||| | | |||||||||||||| ||||||||||||||| | ||||||||||||| ||||||||||||| | |
|
|
| T |
8913779 |
gaaggtattatagaccttcaagtttgtcttcctcgtgagattttggagggaatgggaaatgaccccaatttcatggatgttgtgtccaactaatgcagcg |
8913878 |
T |
 |
| Q |
203 |
tgatgtgtgtaaaatcaatttggtacaatat |
233 |
Q |
| |
|
||| ||||||||||||||| || |||||||| |
|
|
| T |
8913879 |
tgaggtgtgtaaaatcaatatgatacaatat |
8913909 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 8941825 - 8942005
Alignment:
| Q |
1 |
tggtttgatgtttatggtaatgattttggttggggaaagcctgtggcagttcgtagtggatatagaggaaatggacttattacggtttttgctggaatag |
100 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||||| ||| | ||||| ||||||||||||| | ||||||| || | | || ||||||||||||| |
|
|
| T |
8941825 |
tggtttgatgtttatggtaatgatttcggatggggaaaacctatagcagt-cgtagtggatataaaataaatggaattgtaaatgtatttgctggaatag |
8941923 |
T |
 |
| Q |
101 |
aagaaggtagtatagatcttcaagtttgtctttcacatgagattttggaggcaatgggaaatgaccctcaattcatggatgt |
182 |
Q |
| |
|
||||||||||||| || |||||||| |||||| | | ||| |||||||||||||||||| |||||| | ||||||||||| |
|
|
| T |
8941924 |
aagaaggtagtattgaccttcaagtatgtcttccttacgaggttttggaggcaatgggaagtgacccacgtttcatggatgt |
8942005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 15)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 7615281 - 7615061
Alignment:
| Q |
1 |
tggtttgatgtttatggtaatgattttggttggggaaagcctgtggcagttcgtagtggatatagaggaaatggacttattacggtttttgctggaatag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
7615281 |
tggtttgatgtttatggtaatgattttggttggggaaagcctgtggcagttcgtagtggatataaaggaaatggacttattacggtttttgctggaatag |
7615182 |
T |
 |
| Q |
101 |
aagaaggtagtatagatcttcaagtttgtctttcacatgagattttggaggcaatgggaaatgaccctcaattcatggatgttgattccaactaatgcaa |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
7615181 |
aagaaggtagtatagatcttcaagtttgtctttcacatgagattttggaggcaatgggaaatgaccctcaattcatggatgttgcgtccaactaatgcaa |
7615082 |
T |
 |
| Q |
201 |
catgatgtgtgtaaaatcaat |
221 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
7615081 |
catgatgtgtgtaaaatcaat |
7615061 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 7637095 - 7636863
Alignment:
| Q |
1 |
tggtttgatgtttatggtaatgattttggttggggaaagcctgtggcagttcgtagtggatatagaggaaatggacttattacggtttttgctggaatag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| | |||||||||||||||||| ||||| ||||||| |
|
|
| T |
7637095 |
tggtttgatgtttatggtaatgattttggatggggaaagcctctggcagttcgtagtggatataaaataaatggacttattacggtatttgccggaatag |
7636996 |
T |
 |
| Q |
101 |
aagaaggtagtatagatcttcaagtttgtctttcacatgagattttggaggcaatgggaaatgaccctcaattcatggatgttgattccaactaatgcaa |
200 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| | | |||||||||||||| ||||||||||||||| | ||||||||||||| ||||||||||||| |
|
|
| T |
7636995 |
aagaaggtagtatagaccttcaagtttgtcttcctcgtgagattttggagggaatgggaaatgaccccaatttcatggatgttgtgtccaactaatgcag |
7636896 |
T |
 |
| Q |
201 |
catgatgtgtgtaaaatcaatttggtacaatat |
233 |
Q |
| |
|
| ||| ||||||||||||||| || |||||||| |
|
|
| T |
7636895 |
cgtgaggtgtgtaaaatcaatatgatacaatat |
7636863 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 51 - 284
Target Start/End: Complemental strand, 7628669 - 7628436
Alignment:
| Q |
51 |
tcgtagtggatatagaggaaatggacttattacggtttttgctggaatagaagaaggtagtatagatcttcaagtttgtctttcacatgagattttggag |
150 |
Q |
| |
|
|||||||||||||| | || |||||| ||| || |||||||||||||||||||||||||| || |||||| | |||||| | | |||||||||||| |
|
|
| T |
7628669 |
tcgtagtggatataaaatgaaaggacttgttaatgtatttgctggaatagaagaaggtagtattgaccttcaaatctgtcttccttacgagattttggag |
7628570 |
T |
 |
| Q |
151 |
gcaatgggaaatgaccctcaattcatggatgttgattccaactaatgcaacatgatgtgtgtaaaatcaatttggtacaatatcgttgaaatgcttgaat |
250 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||||||||||||||| || ||| ||| | |||||| ||| |
|
|
| T |
7628569 |
gcaatgggaaatgaccctcaatttgtggatgttgtgtccaactaatgcaacgtgaggtgtgtaaaatcaatttggtgcagtattgttcagatgcttcaat |
7628470 |
T |
 |
| Q |
251 |
ttgttttttgtgtgacaacccatgaataattttt |
284 |
Q |
| |
|
||| |||||||||||||||||||||||||||||| |
|
|
| T |
7628469 |
ttggtttttgtgtgacaacccatgaataattttt |
7628436 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 7606267 - 7606086
Alignment:
| Q |
1 |
tggtttgatgtttatggtaatgattttggttggggaaagcctgtggcagttcgtagtggatatagaggaaatggacttattacggtttttgctggaatag |
100 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||||| ||| | ||||||||||||||||||| | ||||||| || | | || ||||||||||||| |
|
|
| T |
7606267 |
tggtttgatgtttatggtaatgatttcggatggggaaaacctatagcagttcgtagtggatataaaataaatggaattgtaaatgtatttgctggaatag |
7606168 |
T |
 |
| Q |
101 |
aagaaggtagtatagatcttcaagtttgtctttcacatgagattttggaggcaatgggaaatgaccctcaattcatggatgt |
182 |
Q |
| |
|
||||||||||||| || |||||||| |||||| | | || |||||||||||||||||| |||||| || ||||||||||| |
|
|
| T |
7606167 |
aagaaggtagtattgaccttcaagtatgtcttccttacaaggttttggaggcaatgggaagtgacccacatttcatggatgt |
7606086 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 3 - 180
Target Start/End: Original strand, 7656227 - 7656404
Alignment:
| Q |
3 |
gtttgatgtttatggtaatgattttggttggggaaagcctgtggcagttcgtagtggatatagaggaaatggacttattacggtttttgctggaatagaa |
102 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| | ||||||| | || | ||||||||||||||| |
|
|
| T |
7656227 |
gtttgatgtttatggtaatgattttggatggggaaagcctgtggcagttcgtagtggaaataaaacaaatggaatggtttgtgcctttgctggaatagaa |
7656326 |
T |
 |
| Q |
103 |
gaaggtagtatagatcttcaagtttgtctttcacatgagattttggaggcaatgggaaatgaccctcaattcatggat |
180 |
Q |
| |
|
|||| ||| || || |||||||| |||||| | | ||||||||||||||||||||||||| ||| | ||||||||| |
|
|
| T |
7656327 |
gaagctagcattgaccttcaagtgtgtcttccttacaagattttggaggcaatgggaaatgatcctgagttcatggat |
7656404 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 39097623 - 39097544
Alignment:
| Q |
97 |
atagaagaaggtagtatagatcttcaagtttgtctttcacatgagattttggaggcaatgggaaatgaccctcaattcat |
176 |
Q |
| |
|
||||||||||||||||| ||| || ||||||| ||||| |||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
39097623 |
atagaagaaggtagtattgatgttgaagtttgcctttcttatgatattttggaggctatgggaaatgaccctcaattcat |
39097544 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 39091355 - 39091270
Alignment:
| Q |
79 |
attacggtttttgctggaatagaagaaggtagtatagatcttcaagtttgtctttcacatgagattttggaggcaatgggaaatga |
164 |
Q |
| |
|
||||| || |||||||| | ||||||||||| |||||| || ||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
39091355 |
attaccgtgtttgctggggttgaagaaggtagcatagatgttgaagtttgtctttcttatgagattttggaggctttgggaaatga |
39091270 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 39091438 - 39091394
Alignment:
| Q |
2 |
ggtttgatgtttatggtaatgattttggttggggaaagcctgtgg |
46 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
39091438 |
ggtttgatgtttacggtaatgattttggttgggggaagcctgtgg |
39091394 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 39082393 - 39082354
Alignment:
| Q |
2 |
ggtttgatgtttatggtaatgattttggttggggaaagcc |
41 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
39082393 |
ggtttgatgtttatggtaatgattttggttgggggaagcc |
39082354 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 39088047 - 39088005
Alignment:
| Q |
2 |
ggtttgatgtttatggtaatgattttggttggggaaagcctgt |
44 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
39088047 |
ggtttgatgtttatgataatgattttggttgggggaagcctgt |
39088005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 39097724 - 39097682
Alignment:
| Q |
2 |
ggtttgatgtttatggtaatgattttggttggggaaagcctgt |
44 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
39097724 |
ggtttgatgtttatggtaatgactttggttggggtaagcctgt |
39097682 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 39070989 - 39070932
Alignment:
| Q |
2 |
ggtttgatgtttatggtaatgattttggttggggaaagcctgtggcagttcgtagtgg |
59 |
Q |
| |
|
|||||||||||| ||| ||||||||||| ||||||||||| ||||| ||||| ||||| |
|
|
| T |
39070989 |
ggtttgatgtttttggcaatgattttggctggggaaagccagtggcggttcgaagtgg |
39070932 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 39075160 - 39075095
Alignment:
| Q |
99 |
agaagaaggtagtatagatcttcaagtttgtctttcacatgagattttggaggcaatgggaaatga |
164 |
Q |
| |
|
||||||||||||| | ||| |||||||||||||| | |||| ||||||||||| ||||||||||| |
|
|
| T |
39075160 |
agaagaaggtagtgttgatattcaagtttgtcttccttatgatattttggaggctatgggaaatga |
39075095 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 39070885 - 39070833
Alignment:
| Q |
100 |
gaagaaggtagtatagatcttcaagtttgtctttcacatgagattttggaggc |
152 |
Q |
| |
|
|||||||||||||||||| || || |||||||||| |||||||||||||||| |
|
|
| T |
39070885 |
gaagaaggtagtatagatgttgaaatttgtctttcttatgagattttggaggc |
39070833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 39087940 - 39087879
Alignment:
| Q |
103 |
gaaggtagtatagatcttcaagtttgtctttcacatgagattttggaggcaatgggaaatga |
164 |
Q |
| |
|
|||||||| || ||| || ||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
39087940 |
gaaggtagcattgatattgaagtttgtctttcttatgagattttggaggctttgggaaatga |
39087879 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 40147453 - 40147636
Alignment:
| Q |
1 |
tggtttgatgtttatggtaatgattttggttggggaaagcctgtggcagttcgtagtggatatagaggaaatggacttattacggtttttgctggaatag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| | |||||||||||||| |||||| ||| | || |||| | ||||| || |||||||||| || |
|
|
| T |
40147453 |
tggtttgatgtttatggtaatgattttggatggggagaacctgtggcagttcgcagtggaaataaaataagtggaatgattactgtatttgctggaaaag |
40147552 |
T |
 |
| Q |
101 |
aagaaggtagtatagatcttcaagtttgtctttcacatgagattttggaggcaatgggaaatgaccctcaattcatggatgttg |
184 |
Q |
| |
|
|||||||||| || || ||||||| |||||| | || ||||||||||||||||||||||||||| | | ||||||||||||| |
|
|
| T |
40147553 |
aagaaggtagcatggactttcaagtgtgtcttcctcacaagattttggaggcaatgggaaatgaccatgacttcatggatgttg |
40147636 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 8102486 - 8102323
Alignment:
| Q |
1 |
tggtttgatgtttatggtaatgattttggttggggaaagcctgtggcagttcgtagtggatatagaggaaatggacttattacggtttttgctggaatag |
100 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| || ||||||||||| |||||| ||| | || |||||| || | || ||||||||||||| |
|
|
| T |
8102486 |
tggtttgatgtttatggcaataattttggatggggaaaaccagtggcagttcgcagtggaaataaacaaagtggactgtttgctgtatttgctggaatag |
8102387 |
T |
 |
| Q |
101 |
aagaaggtagtatagatcttcaagtttgtctttcacatgagattttggaggcaatgggaaatga |
164 |
Q |
| |
|
||||||||||||| || |||||||| |||||| | || ||||||||||||||||||||||||| |
|
|
| T |
8102386 |
aagaaggtagtatggaccttcaagtatgtcttcctcacaagattttggaggcaatgggaaatga |
8102323 |
T |
 |
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Target: chr6 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 6500530 - 6500335
Alignment:
| Q |
1 |
tggtttgatgtttatggtaatgattttggttggggaaagcctgtggcagttcgtagtggatatagaggaaatggacttattacggtttttgctggaatag |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||| || || |||||| |||| |||| | ||| | | |||| | ||| || |||||||||| || |
|
|
| T |
6500530 |
tggtttgatatttatggtaatgattttggatgggggaaacccgtggcatttcgcagtgtaaataaaatagatggtatggttagtgtatttgctggaaaag |
6500431 |
T |
 |
| Q |
101 |
aagaaggtagtatagatcttcaagtttgtctttcacatgagattttggaggcaatgggaaatgaccctcaattcatggatgttgattccaactaat |
196 |
Q |
| |
|
|| ||||||||||||| ||||||||||||||| | | ||| |||||| |||||| | |||||||| | |||||||||| || |||||||||| |
|
|
| T |
6500430 |
aataaggtagtatagaccttcaagtttgtcttccttacaagactttggaagcaatgagttatgaccctaatttcatggatgctgtgtccaactaat |
6500335 |
T |
 |
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Target: scaffold0190 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0190
Description:
Target: scaffold0190; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 4493 - 4435
Alignment:
| Q |
1 |
tggtttgatgtttatggtaatgattttggttggggaaagcctgtggcagttcgtagtgg |
59 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| |
|
|
| T |
4493 |
tggtttgatgtttatggtaatgattttggttggggaaaacctgtgggggttcgaagtgg |
4435 |
T |
 |
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Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15745029 - 15745074
Alignment:
| Q |
1 |
tggtttgatgtttatggtaatgattttggttggggaaagcctgtgg |
46 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
15745029 |
tggtttgatgtttatggcaatgattttggttggggaaaacctgtgg |
15745074 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 162
Target Start/End: Complemental strand, 34174053 - 34173991
Alignment:
| Q |
100 |
gaagaaggtagtatagatcttcaagtttgtctttcacatgagattttggaggcaatgggaaat |
162 |
Q |
| |
|
|||||||||||||| ||| |||||||||||||| | |||| ||||||||||| || |||||| |
|
|
| T |
34174053 |
gaagaaggtagtattgatattcaagtttgtcttccttatgatattttggaggctattggaaat |
34173991 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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