View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7461_2D_low_28 (Length: 232)
Name: NF7461_2D_low_28
Description: NF7461_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7461_2D_low_28 |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 24875233 - 24875462
Alignment:
| Q |
1 |
tacttttgatttggtaaattatgcatgaaatgtgattgttactgttatcattgatagggacagaaatccaaagtacctgaattcattgaatatgcaagaa |
100 |
Q |
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| T |
24875233 |
tacttttgatttggtaaattatgcatgaaatgtgattgttactgttatcattgatagggacagaaatccaaagtacctgaattcattgaatatgcaagaa |
24875332 |
T |
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| Q |
101 |
tatgtaattctcacaaaattatgaaatttattccttgtttataacttggttggtagatgtcattgttgttacagttgcatttttcaattgttctcctttc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24875333 |
tatgtaattctcacaaaattatgaaatttattccttgtttatagcttggttggtagatgtcattgttgttacagttgcatttttcaattgttctcctttc |
24875432 |
T |
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| Q |
201 |
cctatcttatttattctcaaaaaacaccaa |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
24875433 |
cctatcttatttattctcaaaaaacaccaa |
24875462 |
T |
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