View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7461_2D_low_36 (Length: 212)

Name: NF7461_2D_low_36
Description: NF7461_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7461_2D_low_36
NF7461_2D_low_36
[»] scaffold0525 (1 HSPs)
scaffold0525 (10-121)||(5463-5574)
[»] chr6 (21 HSPs)
chr6 (10-109)||(14470916-14471015)
chr6 (10-121)||(8242447-8242560)
chr6 (10-121)||(11565436-11565549)
chr6 (10-121)||(12620264-12620377)
chr6 (10-121)||(23988338-23988451)
chr6 (10-121)||(22861790-22861903)
chr6 (11-109)||(18918525-18918623)
chr6 (46-121)||(1643323-1643398)
chr6 (53-121)||(16758782-16758852)
chr6 (53-121)||(22947734-22947804)
chr6 (53-121)||(22951690-22951760)
chr6 (53-121)||(23870178-23870248)
chr6 (53-121)||(23874134-23874204)
chr6 (11-93)||(2076322-2076404)
chr6 (11-104)||(23400714-23400805)
chr6 (10-93)||(11716899-11716984)
chr6 (10-72)||(27555574-27555636)
chr6 (11-103)||(18953436-18953526)
chr6 (10-91)||(22075347-22075434)
chr6 (48-109)||(14981182-14981244)
chr6 (11-63)||(27222868-27222920)
[»] chr8 (13 HSPs)
chr8 (10-121)||(21974114-21974227)
chr8 (10-121)||(21978224-21978337)
chr8 (10-121)||(43250237-43250350)
chr8 (11-121)||(21386195-21386305)
chr8 (53-121)||(21829402-21829472)
chr8 (11-93)||(23913301-23913383)
chr8 (11-93)||(44385794-44385876)
chr8 (10-91)||(14399053-14399136)
chr8 (11-91)||(21409937-21410019)
chr8 (11-91)||(21804429-21804511)
chr8 (53-121)||(22110668-22110738)
chr8 (11-93)||(23427862-23427944)
chr8 (50-93)||(37515104-37515148)
[»] chr7 (31 HSPs)
chr7 (10-121)||(31760-31873)
chr7 (10-121)||(12706053-12706166)
chr7 (10-121)||(12713575-12713688)
chr7 (10-118)||(16908443-16908553)
chr7 (10-118)||(12722233-12722343)
chr7 (10-121)||(12717322-12717435)
chr7 (10-121)||(18278029-18278142)
chr7 (10-121)||(18281993-18282106)
chr7 (10-91)||(2531293-2531376)
chr7 (53-121)||(72313-72383)
chr7 (53-121)||(76422-76492)
chr7 (11-93)||(16582457-16582539)
chr7 (11-93)||(20486778-20486860)
chr7 (11-93)||(10607281-10607363)
chr7 (11-109)||(18301387-18301485)
chr7 (11-104)||(26291193-26291284)
chr7 (10-91)||(2833442-2833525)
chr7 (11-91)||(15083262-15083344)
chr7 (13-121)||(1859955-1860062)
chr7 (11-109)||(9752452-9752550)
chr7 (11-93)||(25928331-25928414)
chr7 (13-93)||(13919372-13919453)
chr7 (11-91)||(39721232-39721314)
chr7 (11-91)||(7520176-7520258)
chr7 (11-66)||(39268301-39268356)
chr7 (11-63)||(11660318-11660370)
chr7 (11-63)||(13891666-13891718)
chr7 (11-63)||(14420823-14420875)
chr7 (11-63)||(16005040-16005092)
chr7 (11-63)||(18606374-18606426)
chr7 (11-63)||(18871333-18871385)
[»] chr5 (17 HSPs)
chr5 (10-121)||(20294549-20294662)
chr5 (10-121)||(19474103-19474216)
chr5 (10-121)||(40727332-40727443)
chr5 (10-121)||(15238050-15238161)
chr5 (10-109)||(20912197-20912296)
chr5 (10-93)||(22108410-22108493)
chr5 (11-93)||(22120552-22120634)
chr5 (10-91)||(18354832-18354915)
chr5 (10-72)||(24768544-24768606)
chr5 (48-110)||(22120499-22120562)
chr5 (52-112)||(22108355-22108416)
chr5 (11-63)||(19510498-19510550)
chr5 (11-63)||(22339048-22339100)
chr5 (11-63)||(23113393-23113445)
chr5 (11-63)||(28372072-28372124)
chr5 (11-63)||(37599999-37600051)
chr5 (11-63)||(38146409-38146461)
[»] chr4 (26 HSPs)
chr4 (10-121)||(9555104-9555217)
chr4 (10-121)||(14758922-14759035)
chr4 (10-121)||(14955690-14955803)
chr4 (10-121)||(17807089-17807202)
chr4 (10-121)||(4562704-4562817)
chr4 (10-121)||(5758386-5758499)
chr4 (10-121)||(25688477-25688590)
chr4 (10-121)||(33740871-33740984)
chr4 (10-121)||(12486306-12486416)
chr4 (11-109)||(23996911-23997009)
chr4 (11-109)||(27532788-27532886)
chr4 (11-109)||(631692-631790)
chr4 (11-93)||(17052406-17052488)
chr4 (11-109)||(22634871-22634969)
chr4 (12-93)||(12422980-12423061)
chr4 (11-91)||(20158408-20158490)
chr4 (10-91)||(20163859-20163942)
chr4 (10-91)||(20161084-20161167)
chr4 (11-91)||(10711861-10711943)
chr4 (11-91)||(10925631-10925713)
chr4 (11-66)||(13813820-13813875)
chr4 (11-66)||(13818308-13818363)
chr4 (11-63)||(15533255-15533307)
chr4 (11-63)||(18211640-18211692)
chr4 (11-63)||(24048375-24048427)
chr4 (11-63)||(49549073-49549125)
[»] chr3 (38 HSPs)
chr3 (10-121)||(7108273-7108386)
chr3 (10-121)||(7112208-7112321)
chr3 (10-121)||(11068648-11068761)
chr3 (10-121)||(22320164-22320277)
chr3 (10-121)||(22335219-22335332)
chr3 (10-121)||(55021411-55021524)
chr3 (10-121)||(11167024-11167137)
chr3 (10-121)||(14497982-14498095)
chr3 (10-121)||(28948496-28948609)
chr3 (10-121)||(15616212-15616325)
chr3 (11-121)||(30064421-30064534)
chr3 (11-121)||(4590093-4590203)
chr3 (11-109)||(17318454-17318552)
chr3 (53-121)||(4112579-4112649)
chr3 (11-93)||(16795539-16795621)
chr3 (11-112)||(14068004-14068105)
chr3 (53-121)||(4108730-4108800)
chr3 (51-121)||(8490324-8490394)
chr3 (11-92)||(12853325-12853406)
chr3 (11-80)||(18933329-18933398)
chr3 (10-91)||(5219882-5219965)
chr3 (10-91)||(11853741-11853824)
chr3 (11-91)||(37440641-37440723)
chr3 (13-121)||(15463916-15464023)
chr3 (10-91)||(11301626-11301709)
chr3 (10-91)||(14664460-14664543)
chr3 (10-91)||(14667624-14667707)
chr3 (11-93)||(14670062-14670141)
chr3 (10-69)||(12337291-12337348)
chr3 (56-93)||(14681626-14681663)
chr3 (12-63)||(23372534-23372585)
chr3 (12-63)||(51299570-51299621)
chr3 (11-63)||(3802006-3802058)
chr3 (11-63)||(13435854-13435906)
chr3 (11-63)||(14764786-14764838)
chr3 (11-63)||(20249840-20249892)
chr3 (11-63)||(29545929-29545981)
chr3 (11-63)||(54519633-54519685)
[»] chr2 (16 HSPs)
chr2 (10-121)||(24629978-24630091)
chr2 (10-121)||(24645186-24645299)
chr2 (10-121)||(24647962-24648075)
chr2 (10-121)||(27600406-27600519)
chr2 (10-121)||(30346588-30346701)
chr2 (10-121)||(27380924-27381037)
chr2 (10-121)||(27384894-27385007)
chr2 (10-117)||(10103231-10103340)
chr2 (10-121)||(12902537-12902650)
chr2 (10-91)||(31343952-31344035)
chr2 (11-89)||(9784030-9784108)
chr2 (50-112)||(20319664-20319727)
chr2 (11-63)||(6481820-6481872)
chr2 (11-63)||(6485287-6485339)
chr2 (11-63)||(19663548-19663600)
chr2 (11-63)||(20260293-20260345)
[»] chr1 (11 HSPs)
chr1 (10-121)||(1009297-1009410)
chr1 (10-121)||(1926726-1926839)
chr1 (10-121)||(16376746-16376859)
chr1 (10-121)||(20925740-20925853)
chr1 (10-121)||(52634303-52634416)
chr1 (11-109)||(21406289-21406387)
chr1 (11-93)||(22132059-22132141)
chr1 (11-104)||(20230090-20230181)
chr1 (10-91)||(33796068-33796151)
chr1 (11-93)||(41801239-41801321)
chr1 (11-63)||(16370961-16371013)
[»] scaffold0372 (1 HSPs)
scaffold0372 (10-121)||(6251-6364)
[»] scaffold0061 (1 HSPs)
scaffold0061 (14-121)||(68486-68595)
[»] scaffold0028 (1 HSPs)
scaffold0028 (10-121)||(60255-60369)
[»] scaffold0349 (1 HSPs)
scaffold0349 (10-118)||(11086-11195)
[»] scaffold0157 (1 HSPs)
scaffold0157 (10-121)||(34061-34171)
[»] scaffold0575 (1 HSPs)
scaffold0575 (11-93)||(6921-7003)
[»] scaffold0380 (2 HSPs)
scaffold0380 (11-109)||(4010-4108)
scaffold0380 (54-98)||(1-45)
[»] scaffold0124 (1 HSPs)
scaffold0124 (11-109)||(25512-25610)
[»] scaffold0410 (1 HSPs)
scaffold0410 (10-91)||(14879-14962)
[»] scaffold0293 (1 HSPs)
scaffold0293 (11-93)||(21299-21382)
[»] scaffold0029 (1 HSPs)
scaffold0029 (11-109)||(62786-62882)
[»] scaffold0486 (1 HSPs)
scaffold0486 (10-72)||(8612-8674)
[»] scaffold0327 (1 HSPs)
scaffold0327 (11-93)||(18859-18941)
[»] scaffold0109 (1 HSPs)
scaffold0109 (11-104)||(37149-37240)
[»] scaffold1852 (1 HSPs)
scaffold1852 (10-91)||(781-864)
[»] scaffold0139 (1 HSPs)
scaffold0139 (50-109)||(22300-22359)
[»] scaffold0166 (1 HSPs)
scaffold0166 (10-72)||(11041-11103)
[»] scaffold0142 (1 HSPs)
scaffold0142 (11-93)||(8700-8782)
[»] scaffold0013 (2 HSPs)
scaffold0013 (11-93)||(74292-74374)
scaffold0013 (47-109)||(74240-74303)
[»] scaffold0031 (1 HSPs)
scaffold0031 (11-93)||(37162-37245)
[»] scaffold0023 (1 HSPs)
scaffold0023 (11-91)||(11813-11895)
[»] scaffold0299 (1 HSPs)
scaffold0299 (10-69)||(5860-5917)
[»] scaffold1873 (1 HSPs)
scaffold1873 (59-121)||(717-777)
[»] scaffold0544 (1 HSPs)
scaffold0544 (12-63)||(3507-3558)
[»] scaffold1427 (1 HSPs)
scaffold1427 (11-63)||(236-288)
[»] scaffold0842 (1 HSPs)
scaffold0842 (11-63)||(5278-5330)
[»] scaffold0337 (1 HSPs)
scaffold0337 (11-63)||(10812-10864)
[»] scaffold0026 (1 HSPs)
scaffold0026 (11-63)||(109637-109689)
[»] scaffold0012 (1 HSPs)
scaffold0012 (11-63)||(224133-224185)


Alignment Details
Target: scaffold0525 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 5574 - 5463
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaatagtaat 109  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||| ||||| ||||    
T  5574 acatcatcaagtacacctaagaactcataaatatcttcatataatcatcatcactaataacttggactacacaatataatcatcacttaataataataat 5475  T
Q  110 aattatctacat 121  Q
    |||||| |||||    
T  5474 aattatatacat 5463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 4e-40; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 14470916 - 14471015
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaatagtaat 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||| ||||    
T  14470916 acatcatcaagtacacctaacaactcataaatatcttcatataatcttcatcactaataacttaaactacacaatataatcatcacttaataataataat 14471015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 8242447 - 8242560
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  8242447 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 8242546  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  8242547 ataattatctacat 8242560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 11565436 - 11565549
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  11565436 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 11565535  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  11565536 ataattatctacat 11565549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 12620377 - 12620264
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  12620377 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 12620278  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  12620277 ataattatctacat 12620264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 23988338 - 23988451
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  23988338 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 23988437  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  23988438 ataattatctacat 23988451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 22861790 - 22861903
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||| ||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  22861790 acatcaccaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 22861889  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  22861890 ataattatctacat 22861903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 18918623 - 18918525
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaatagtaat 109  Q
    ||||||||||||||  ||||||||| || ||| | |||| |||||||||||||||||||||||||||| |||||||||||||| |||| ||||| ||||    
T  18918623 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataacttaaactatacaatataatcatcacttaataataataat 18918525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 46 - 121
Target Start/End: Original strand, 1643323 - 1643398
Alignment:
Q  46 tcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaatagtaataattatctacat 121  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||| || || |||||||||| |||||    
T  1643323 tcatgtaatcatcatcactaataacttaaactacacaatataatcatcacttaatagtaataataattatatacat 1643398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 16758782 - 16758852
Alignment:
Q  53 atcatcatcactaataactt--aaactacacaatataatcatctcttattaatagtaataattatctacat 121  Q
    ||||||||||||||||| ||  |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16758782 atcatcatcactaataaatttaaaacaacacaatataatcatctcttattaatagtaataattatctacat 16758852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 22947734 - 22947804
Alignment:
Q  53 atcatcatcactaataactt--aaactacacaatataatcatctcttattaatagtaataattatctacat 121  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||| |||||    
T  22947734 atcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagtaataattatatacat 22947804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 22951690 - 22951760
Alignment:
Q  53 atcatcatcactaataactt--aaactacacaatataatcatctcttattaatagtaataattatctacat 121  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||| |||||    
T  22951690 atcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagtaataattatatacat 22951760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 23870178 - 23870248
Alignment:
Q  53 atcatcatcactaataactt--aaactacacaatataatcatctcttattaatagtaataattatctacat 121  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||| |||||    
T  23870178 atcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagtaataattatatacat 23870248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 23874134 - 23874204
Alignment:
Q  53 atcatcatcactaataactt--aaactacacaatataatcatctcttattaatagtaataattatctacat 121  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||| |||||    
T  23874134 atcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagtaataattatatacat 23874204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 2076322 - 2076404
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatc 93  Q
    ||||||||| ||||  |||||||||||| ||| | |||| |||||||||||||||||||||||||| ||||||||||||||||    
T  2076322 catcatcaaatacatttaacaactcatagataacatcatgtaatcatcatcactaataacttaaacaacacaatataatcatc 2076404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 23400714 - 23400805
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaata 104  Q
    ||||||||||||||  |||||||||||| ||| | |||| |||||||||||||||||||||||||||  |||||||||||||| |||| |||||    
T  23400714 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataacttaaact--acaatataatcatcacttaataata 23400805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 11716984 - 11716899
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatc 93  Q
    |||||||||||||||| |||||||||||| ||||| |||| |||||||||||| |||||||||  |||| ||||||||||| ||||    
T  11716984 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcattaataactttaaaacaacacaatataaacatc 11716899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 27555574 - 27555636
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt 72  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||    
T  27555574 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 27555636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 18953526 - 18953436
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaat 103  Q
    ||||||||||||||  ||||||||| || ||  | |||| |||||||||||||||||||||||||||  |||||||||||||| |||| ||||    
T  18953526 catcatcaagtacatttaacaactcctagatgacatcatgtaatcatcatcactaataacttaaact--acaatataatcatcacttaataat 18953436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 22075434 - 22075347
Alignment:
Q  10 acatcatcaagtacacctaacaactc----ataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    |||||||||||||||| |||||||||    ||| ||||| |||| ||||||||||||||||||||||  |||| ||||||| ||||||    
T  22075434 acatcatcaagtacacttaacaactcatagatatatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 22075347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 14981244 - 14981182
Alignment:
Q  48 atataatcatcatcac-taataacttaaactacacaatataatcatctcttattaatagtaat 109  Q
    |||||||||||||| | ||||||||||||| |||||| ||||||||| |||| ||||| ||||    
T  14981244 atataatcatcatctcataataacttaaacaacacaacataatcatcacttaataataataat 14981182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 27222868 - 27222920
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  27222868 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 27222920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 2e-39; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 21974227 - 21974114
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  21974227 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 21974128  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  21974127 ataattatctacat 21974114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 21978337 - 21978224
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  21978337 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 21978238  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  21978237 ataattatctacat 21978224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 43250237 - 43250350
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| |||||||||||| |||||||||  |||| ||||||||||||||||||||||||||||||    
T  43250237 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcattaataactttaaaacaacacaatataatcatctcttattaatagta 43250336  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  43250337 ataattatctacat 43250350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 21386195 - 21386305
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaatagtaata 110  Q
    ||||||||||||||  ||||||||| || ||| | |||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||    
T  21386195 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataacttaaactacacaatataatcatcacttaataataataata 21386294  T
Q  111 attatctacat 121  Q
    ||||| |||||    
T  21386295 attatatacat 21386305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 21829472 - 21829402
Alignment:
Q  53 atcatcatcactaataactt--aaactacacaatataatcatctcttattaatagtaataattatctacat 121  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21829472 atcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagtaataattatctacat 21829402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 23913301 - 23913383
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatc 93  Q
    ||||||||||||||  |||||||| ||| ||| | |||| |||||||||||||||||||||||||| ||||||||||||||||    
T  23913301 catcatcaagtacatttaacaacttatagataacatcatgtaatcatcatcactaataacttaaacaacacaatataatcatc 23913383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 44385876 - 44385794
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatc 93  Q
    ||||||||||||||  |||||||||||| ||| | |||| |||||||||||||||| ||||||||| ||||||||||||||||    
T  44385876 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaacaacttaaacaacacaatataatcatc 44385794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 14399136 - 14399053
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||| ||||||    
T  14399136 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14399053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 21409937 - 21410019
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    ||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||| ||||||    
T  21409937 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 21410019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 21804429 - 21804511
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    ||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||| ||||||    
T  21804429 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 21804511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 22110668 - 22110738
Alignment:
Q  53 atcatcatcactaataactt--aaactacacaatataatcatctcttattaatagtaataattatctacat 121  Q
    ||||||||||||||||||||  |||| ||| ||||||||||||||||||||||| ||||||||||||||||    
T  22110668 atcatcatcactaataactttaaaacaacataatataatcatctcttattaatattaataattatctacat 22110738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 23427862 - 23427944
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatc 93  Q
    |||||| |||||||  |||||||||||| ||| | |||| ||||||||||||||||||||||| || ||||||||||||||||    
T  23427862 catcattaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataacttagacaacacaatataatcatc 23427944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 93
Target Start/End: Original strand, 37515104 - 37515148
Alignment:
Q  50 ataatcatcatcac-taataacttaaactacacaatataatcatc 93  Q
    |||||||||||| | ||||||||||||| ||||||||||||||||    
T  37515104 ataatcatcatctcataataacttaaacaacacaatataatcatc 37515148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 31760 - 31873
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  31760 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 31859  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  31860 ataattatctacat 31873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 12706166 - 12706053
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  12706166 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 12706067  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  12706066 ataattatctacat 12706053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 12713575 - 12713688
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  12713575 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 12713674  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  12713675 ataattatctacat 12713688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 118
Target Start/End: Complemental strand, 16908553 - 16908443
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  16908553 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 16908454  T
Q  108 ataattatcta 118  Q
    |||||||||||    
T  16908453 ataattatcta 16908443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 118
Target Start/End: Original strand, 12722233 - 12722343
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||| ||||||||||    
T  12722233 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctctcattaatagta 12722332  T
Q  108 ataattatcta 118  Q
    |||||||||||    
T  12722333 ataattatcta 12722343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 12717322 - 12717435
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||| ||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||| ||||||||||    
T  12717322 acatcagcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctctcattaatagta 12717421  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  12717422 ataattatctacat 12717435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 18278029 - 18278142
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| ||||  |||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  18278029 acatcatcaagtacacttaacaactcatagatatcatcatgcaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 18278128  T
Q  108 ataattatctacat 121  Q
    |||||| |||||||    
T  18278129 ataattgtctacat 18278142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 18281993 - 18282106
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| |||||||||||||||| |||||  |||| ||||||||||||||||||||||||||||||    
T  18281993 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaaaaactttaaaacaacacaatataatcatctcttattaatagta 18282092  T
Q  108 ataattatctacat 121  Q
    |||||| |||||||    
T  18282093 ataattgtctacat 18282106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 2531376 - 2531293
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||| ||||||| ||||||    
T  2531376 acatcatcaagtacacctaacaactcatagatatcttcatataatcatcatcactaataactttaaaacaacacaatgtaatca 2531293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 72383 - 72313
Alignment:
Q  53 atcatcatcactaataactt--aaactacacaatataatcatctcttattaatagtaataattatctacat 121  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  72383 atcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagtaataattatctacat 72313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 76492 - 76422
Alignment:
Q  53 atcatcatcactaataactt--aaactacacaatataatcatctcttattaatagtaataattatctacat 121  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  76492 atcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagtaataattatctacat 76422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 16582457 - 16582539
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatc 93  Q
    ||||||||||||||  |||||||||||||||| | |||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  16582457 catcatcaagtacatttaacaactcataaataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcatc 16582539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 20486778 - 20486860
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatc 93  Q
    ||||||||||||||  |||||||||||| ||| | |||| |||||||||||||||||||||||||| ||||||||||||||||    
T  20486778 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataacttaaacaacacaatataatcatc 20486860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 10607363 - 10607281
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatc 93  Q
    ||||||||||||||  |||||||||||| ||| | |||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  10607363 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcatc 10607281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 18301387 - 18301485
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaatagtaat 109  Q
    ||||||||||||||  ||||||||| || ||| | |||| |||||||||||||||||||||||||| ||||||||||||| || |||| ||||| ||||    
T  18301387 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataacttaaacaacacaatataatcgtcacttaataataataat 18301485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 26291193 - 26291284
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaata 104  Q
    ||||||||||||||| |||||||||||| ||| | |||| |||||||||||||||||||||||||||  |||||||||||| | |||| |||||    
T  26291193 catcatcaagtacacttaacaactcatagataacatcatgtaatcatcatcactaataacttaaact--acaatataatcaccacttaataata 26291284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 2833525 - 2833442
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||| ||||||    
T  2833525 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 2833442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 15083262 - 15083344
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    ||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||| ||||||    
T  15083262 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 15083344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 1860062 - 1859955
Alignment:
Q  13 tcatcaagtacacctaacaactcataaatatcttcatataatcatca-tcactaataacttaaactacacaatataatcatctcttattaatagtaataa 111  Q
    ||||||||||||  |||||||||||| ||| | || | ||||||||| ||||||||||||||||| |||||||||||||||| ||  |||||| ||||||    
T  1860062 tcatcaagtacatttaacaactcatatataacatcctgtaatcatcaatcactaataacttaaacaacacaatataatcatcact--ttaataataataa 1859965  T
Q  112 ttatctacat 121  Q
    |||| |||||    
T  1859964 ttatatacat 1859955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 9752550 - 9752452
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaatagtaat 109  Q
    ||||| ||||||||  |||||||||||| ||| | |||| |||| ||||||||||||||||||||| ||||||||| |||||| |||| ||||| ||||    
T  9752550 catcaccaagtacatttaacaactcatagataacatcatgtaattatcatcactaataacttaaacaacacaatatgatcatcacttaataataataat 9752452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 25928414 - 25928331
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataac-ttaaactacacaatataatcatc 93  Q
    |||||| |||||||  |||||||||||| ||| | |||| |||||||||||||||||||| |||||| ||||||||||||||||    
T  25928414 catcataaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactttaaacaacacaatataatcatc 25928331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 13919453 - 13919372
Alignment:
Q  13 tcatcaagtacacctaacaactcataaatatcttcatataatcatca-tcactaataacttaaactacacaatataatcatc 93  Q
    ||||||||||||  |||||||||||| ||| | || | ||||||||| ||||||||||||||||| ||||||||||||||||    
T  13919453 tcatcaagtacatttaacaactcatatataacatcctgtaatcatcaatcactaataacttaaacaacacaatataatcatc 13919372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 39721232 - 39721314
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    ||||||||||||||  |||||||||||| ||||| |||| |||||||||| |||||||||||  |||| ||||||| ||||||    
T  39721232 catcatcaagtacatttaacaactcatagatatcatcatgtaatcatcattactaataactttaaaacaacacaatgtaatca 39721314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 7520258 - 7520176
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    ||||||||||||||  |||||||||||| ||| | |||| |||||||||||||| |||||||  |||| ||||||| ||||||    
T  7520258 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactgataactttaaaacaacacaatgtaatca 7520176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 39268356 - 39268301
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaa 66  Q
    ||||||||||||||  |||||||||||| ||| | |||| ||||||||||||||||    
T  39268356 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaa 39268301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 11660318 - 11660370
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | |||| |||||||||||||    
T  11660318 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcac 11660370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 13891666 - 13891718
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | |||| |||||||||||||    
T  13891666 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcac 13891718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 14420823 - 14420875
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  14420823 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 14420875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 16005040 - 16005092
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  16005040 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 16005092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 18606374 - 18606426
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  18606374 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 18606426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 18871333 - 18871385
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  18871333 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 18871385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 2e-39; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 20294549 - 20294662
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  20294549 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 20294648  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  20294649 ataattatctacat 20294662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 19474216 - 19474103
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||| ||    
T  19474216 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaataata 19474117  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  19474116 ataattatctacat 19474103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 40727443 - 40727332
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaatagtaat 109  Q
    ||||||||||||||||| ||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| || || ||||    
T  40727443 acatcatcaagtacaccaaacaacttatagatatcttcatgtaatcatcatcactaataacttaaactacacaatataatcatcacttaatagtaataat 40727344  T
Q  110 aattatctacat 121  Q
    |||||| |||||    
T  40727343 aattatatacat 40727332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 15238161 - 15238050
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaatagtaat 109  Q
    |||||||||||||||  |||||||||||| ||| | |||| ||||||||||||||||||||||||||||||||||||||||||| |||| || || ||||    
T  15238161 acatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataacttaaactacacaatataatcatcacttaatagtaataat 15238062  T
Q  110 aattatctacat 121  Q
    |||||| |||||    
T  15238061 aattatatacat 15238050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 20912296 - 20912197
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaatagtaat 109  Q
    |||||||||||||||| |||||||||||| ||| | |||| |||||||||||||||||||||||||| | |||||||||||||| |||| ||||| ||||    
T  20912296 acatcatcaagtacacttaacaactcatagataacatcatgtaatcatcatcactaataacttaaacaatacaatataatcatcacttaataataataat 20912197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 22108493 - 22108410
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatc 93  Q
    |||||||||||||||  |||||||||||| ||| | |||| |||||||||||||||||||||||||| |||||||| |||||||    
T  22108493 acatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataacttaaacaacacaatagaatcatc 22108410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 22120634 - 22120552
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatc 93  Q
    ||||||||||||||  |||||||||||| ||| | |||||||||||||||||||||||| |||||  ||||||||||||||||    
T  22120634 catcatcaagtacatttaacaactcatagataacatcatataatcatcatcactaataaattaaataacacaatataatcatc 22120552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 18354832 - 18354915
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||| ||||||    
T  18354832 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 18354915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 24768606 - 24768544
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt 72  Q
    ||||||||| |||||| |||||||||||| ||||| |||| ||||||||||||||||||||||    
T  24768606 acatcatcaggtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 24768544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 110
Target Start/End: Complemental strand, 22120562 - 22120499
Alignment:
Q  48 atataatcatcatcac-taataacttaaactacacaatataatcatctcttattaatagtaata 110  Q
    |||||||||||||| | |||||||||| ||||||||||||||||||| |||| ||||| |||||    
T  22120562 atataatcatcatctcataataacttagactacacaatataatcatcacttaataataataata 22120499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 22108416 - 22108355
Alignment:
Q  52 aatcatcatcac-taataacttaaactacacaatataatcatctcttattaatagtaataat 112  Q
    |||||||||| | |||||||||| || |||||||||||||||| |||| ||||| |||||||    
T  22108416 aatcatcatctcataataacttagaccacacaatataatcatcacttaataataataataat 22108355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 19510498 - 19510550
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  19510498 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 19510550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 22339048 - 22339100
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  22339048 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 22339100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 23113445 - 23113393
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  23113445 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 23113393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 28372124 - 28372072
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  28372124 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 28372072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 37600051 - 37599999
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  37600051 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 37599999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 38146461 - 38146409
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  38146461 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 38146409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 9555104 - 9555217
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  9555104 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 9555203  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  9555204 ataattatctacat 9555217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 14759035 - 14758922
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  14759035 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 14758936  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  14758935 ataattatctacat 14758922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 14955803 - 14955690
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  14955803 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 14955704  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  14955703 ataattatctacat 14955690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 17807089 - 17807202
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  17807089 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 17807188  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  17807189 ataattatctacat 17807202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 4562817 - 4562704
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  4562817 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacccaatataatcatctcttattaatagta 4562718  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  4562717 ataattatctacat 4562704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 5758499 - 5758386
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| |||||||| |||||||||||||||||||||    
T  5758499 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatagaatcatctcttattaatagta 5758400  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  5758399 ataattatctacat 5758386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 25688477 - 25688590
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  25688477 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 25688576  T
Q  108 ataattatctacat 121  Q
    |||||||| |||||    
T  25688577 ataattatatacat 25688590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 33740871 - 33740984
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||| ||  |||| ||||||||||||||||||||||||||||||    
T  33740871 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataattttaaaacaacacaatataatcatctcttattaatagta 33740970  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  33740971 ataattatctacat 33740984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 12486306 - 12486416
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| |||||||||   ||||||||||  |||| ||||||||||||||||||||||||||||||    
T  12486306 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatca---ctaataactttaaaacaacacaatataatcatctcttattaatagta 12486402  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  12486403 ataattatctacat 12486416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 23997009 - 23996911
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaatagtaat 109  Q
    ||||||||||||||  |||||||||||| ||| | |||| |||||||||||||||||||||||||| |||||||||||||||| |||| ||||| ||||    
T  23997009 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataacttaaacaacacaatataatcatcacttaataataataat 23996911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 27532788 - 27532886
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaatagtaat 109  Q
    ||||||||||||||  ||||||||| || ||| | |||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||    
T  27532788 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataacttaaactacacaatataatcatcacttaataataataat 27532886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 631790 - 631692
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaatagtaat 109  Q
    ||||||||||||||  |||||||||||| ||| | |||| |||||||||||||||||||||||||| ||||||||||||| || |||| ||||| ||||    
T  631790 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataacttaaacaacacaatataatcgtcacttaataataataat 631692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 17052488 - 17052406
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatc 93  Q
    ||||||||||||||  |||||||||||| ||| | |||| |||||||||||||||||||||||||| ||||||||||||||||    
T  17052488 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataacttaaacaacacaatataatcatc 17052406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 22634969 - 22634871
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaatagtaat 109  Q
    ||||||||||||||  |||||||||||| ||| | |||| |||||||||||||||||||||||||| ||||||||| |||||| |||| ||||| ||||    
T  22634969 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataacttaaacaacacaatatgatcatcacttaataataataat 22634871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 12422980 - 12423061
Alignment:
Q  12 atcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatc 93  Q
    |||||||||||||  |||||||||||| ||| | |||| |||||||||||||||||||||||||| ||||||||||||||||    
T  12422980 atcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataacttaaacaacacaatataatcatc 12423061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 20158490 - 20158408
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    ||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||| ||||||    
T  20158490 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 20158408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 20163942 - 20163859
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||| ||||||||||||||||  |||| ||||||| ||||||    
T  20163942 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcgtcatcactaataactttaaaacaacacaatgtaatca 20163859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 20161167 - 20161084
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    |||| ||||||||||| |||||||||||| ||||| |||| ||||| ||||||||||||||||  |||| ||||||| ||||||    
T  20161167 acattatcaagtacacttaacaactcatagatatcatcatgtaatcgtcatcactaataactttaaaacaacacaatgtaatca 20161084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 10711861 - 10711943
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    ||||||||||||||  ||||||||| || ||| | |||| ||||||||||||||||||||||  |||| ||||||| ||||||    
T  10711861 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 10711943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 10925631 - 10925713
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    ||||||||||||||  ||||||||| || ||| | |||| ||||||||||||||||||||||  |||| ||||||| ||||||    
T  10925631 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 10925713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 13813875 - 13813820
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaa 66  Q
    ||||||||||||||  |||||||||||| ||| | |||| ||||||||||||||||    
T  13813875 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaa 13813820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 13818363 - 13818308
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaa 66  Q
    ||||||||||||||  |||||||||||| ||| | |||| ||||||||||||||||    
T  13818363 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaa 13818308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 15533255 - 15533307
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  15533255 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 15533307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 18211640 - 18211692
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  18211640 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 18211692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 24048427 - 24048375
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | |||| |||||||||||||    
T  24048427 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcac 24048375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 49549125 - 49549073
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  49549125 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 49549073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 7108273 - 7108386
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  7108273 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 7108372  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  7108373 ataattatctacat 7108386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 7112208 - 7112321
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  7112208 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 7112307  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  7112308 ataattatctacat 7112321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 11068648 - 11068761
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  11068648 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 11068747  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  11068748 ataattatctacat 11068761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 22320164 - 22320277
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  22320164 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 22320263  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  22320264 ataattatctacat 22320277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 22335219 - 22335332
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  22335219 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 22335318  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  22335319 ataattatctacat 22335332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 55021411 - 55021524
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  55021411 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 55021510  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  55021511 ataattatctacat 55021524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 11167137 - 11167024
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    ||||||||||||| || |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  11167137 acatcatcaagtaaacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 11167038  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  11167037 ataattatctacat 11167024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 14497982 - 14498095
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||| ||||||||||  |||| ||||||||||||||||||||||||||||||    
T  14497982 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcgctaataactttaaaacaacacaatataatcatctcttattaatagta 14498081  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  14498082 ataattatctacat 14498095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 28948496 - 28948609
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||| ||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  28948496 acatcatcaagtacacttaacaacttatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 28948595  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  28948596 ataattatctacat 28948609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 15616212 - 15616325
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    ||||| |||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||| ||||||||||||||||||||||||    
T  15616212 acatcttcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacattataatcatctcttattaatagta 15616311  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  15616312 ataattatctacat 15616325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 30064421 - 30064534
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactac---acaatataatcatctcttattaatagta 107  Q
    ||||||||||||||| |||||||||||| ||| | |||| |||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||    
T  30064421 catcatcaagtacacttaacaactcatagataacatcatgtaatcatcatcactaataacttaaactacaatataatataatcatctcttattaatagta 30064520  T
Q  108 ataattatctacat 121  Q
     |||||||||||||    
T  30064521 gtaattatctacat 30064534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 4590203 - 4590093
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaatagtaata 110  Q
    ||||||||||||||  ||||||||| || ||| | |||| |||||||||||||||||||||||||||||||||||||||| || |||| ||||| |||||    
T  4590203 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataacttaaactacacaatataatcgtcacttaataataataata 4590104  T
Q  111 attatctacat 121  Q
    ||||| |||||    
T  4590103 attatatacat 4590093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 17318552 - 17318454
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaatagtaat 109  Q
    ||||||||||||||  ||||||||| || ||| |||||| || |||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||    
T  17318552 catcatcaagtacatttaacaactcctagataacttcatgtattcatcatcactaataacttaaactacacaatataatcatcacttaataataataat 17318454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 4112649 - 4112579
Alignment:
Q  53 atcatcatcactaataactt--aaactacacaatataatcatctcttattaatagtaataattatctacat 121  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4112649 atcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagtaataattatctacat 4112579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 16795539 - 16795621
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatc 93  Q
    ||||||||||||||  |||||||||||| ||| | |||| |||||||||||||||||||||||||| ||||||||||||||||    
T  16795539 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataacttaaacaacacaatataatcatc 16795621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 14068105 - 14068004
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaatagtaata 110  Q
    ||||||||| ||||  || |||||| || ||| | |||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||    
T  14068105 catcatcaaatacatttagcaactcctagataacatcatgtaatcatcatcactaataacttaaactacacaatataatcatcacttaataataataata 14068006  T
Q  111 at 112  Q
    ||    
T  14068005 at 14068004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 4108800 - 4108730
Alignment:
Q  53 atcatcatcactaataactt--aaactacacaatataatcatctcttattaatagtaataattatctacat 121  Q
    ||||||||||||||||||||  |||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  4108800 atcatcatcactaataactttaaaacaacacaatataatcatttcttattaatagtaataattatctacat 4108730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 8490394 - 8490324
Alignment:
Q  51 taatcatcatcactaataacttaaactacacaatataatcatctcttattaatagtaataattatctacat 121  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||| |||||    
T  8490394 taatcaccatcactaataacttaaactacacaatataatcatcacttaataataataataattatatacat 8490324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 12853406 - 12853325
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcat 92  Q
    ||||||||||||||  |||||||||||| ||| | |||| ||||||||||||||||||| |||||| |||||||||||||||    
T  12853406 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 12853325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 18933398 - 18933329
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactaca 80  Q
    ||||||||||||||| |||||||||||| ||| | |||| ||||||||||||||||||||||||||||||    
T  18933398 catcatcaagtacacttaacaactcatagataacatcatgtaatcatcatcactaataacttaaactaca 18933329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 5219882 - 5219965
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||| ||||||    
T  5219882 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 5219965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 11853741 - 11853824
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||| ||||||    
T  11853741 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 11853824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 37440723 - 37440641
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    ||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||| ||||||    
T  37440723 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 37440641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 15463916 - 15464023
Alignment:
Q  13 tcatcaagtacacctaacaactcataaatatcttcatataatcatca-tcactaataacttaaactacacaatataatcatctcttattaatagtaataa 111  Q
    ||||||||||||  |||||||||||| ||| | || | ||||||||| ||||||||||||||||| |||||||||||||||| ||  |||||| ||||||    
T  15463916 tcatcaagtacatttaacaactcatatataacatcctgtaatcatcaatcactaataacttaaacaacacaatataatcatcact--ttaataataataa 15464013  T
Q  112 ttatctacat 121  Q
    |||| |||||    
T  15464014 ttatatacat 15464023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 11301709 - 11301626
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    |||||||||||||||| |||||||||||| ||||| ||||  |||||||||||||||||||||  |||| ||||||| ||||||    
T  11301709 acatcatcaagtacacttaacaactcatagatatcatcatgcaatcatcatcactaataactttaaaacaacacaatgtaatca 11301626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 14664460 - 14664543
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    |||||||||||||||| |||||||||||| ||||| | || ||||||||||||||||||||||  |||| ||||||| ||||||    
T  14664460 acatcatcaagtacacttaacaactcatagatatcattatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14664543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 14667624 - 14667707
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    |||||||||||||||| |||||||||||| || || |||| ||||||||||||||||||||||  |||| ||||||| ||||||    
T  14667624 acatcatcaagtacacttaacaactcatagatctcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14667707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 14670062 - 14670141
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatc 93  Q
    ||||||||||||||  |||||||||||| ||| | |||| ||||||   ||||||||||||||||| ||||||||||||||||    
T  14670062 catcatcaagtacatttaacaactcatagataacatcatgtaatca---tcactaataacttaaacaacacaatataatcatc 14670141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 12337291 - 12337348
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataa 69  Q
    |||||||||||||||| |||||||||||  ||||| |||| |||||||||||||||||||    
T  12337291 acatcatcaagtacacttaacaactcat--atatcatcatgtaatcatcatcactaataa 12337348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 14681626 - 14681663
Alignment:
Q  56 atcatcactaataacttaaactacacaatataatcatc 93  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  14681626 atcatcactaataacttaaacaacacaatataatcatc 14681663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 23372585 - 23372534
Alignment:
Q  12 atcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    |||||||||||||  |||||||||||||||| | ||| ||||||||||||||    
T  23372585 atcatcaagtacatttaacaactcataaataacatcacataatcatcatcac 23372534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 51299570 - 51299621
Alignment:
Q  12 atcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    |||||||||||||  |||||||||||||||| | ||| ||||||||||||||    
T  51299570 atcatcaagtacatttaacaactcataaataacatcacataatcatcatcac 51299621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 3802006 - 3802058
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  3802006 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 3802058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 13435854 - 13435906
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | |||| |||||||||||||    
T  13435854 catcatcaagtacatttaacaactcatatataacatcatgtaatcatcatcac 13435906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 14764838 - 14764786
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  14764838 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 14764786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 20249892 - 20249840
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  20249892 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 20249840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 29545981 - 29545929
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  29545981 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 29545929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 54519633 - 54519685
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  54519633 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 54519685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 24630091 - 24629978
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  24630091 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 24629992  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  24629991 ataattatctacat 24629978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 24645186 - 24645299
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  24645186 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 24645285  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  24645286 ataattatctacat 24645299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 24647962 - 24648075
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  24647962 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 24648061  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  24648062 ataattatctacat 24648075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 27600406 - 27600519
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  27600406 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 27600505  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  27600506 ataattatctacat 27600519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 30346701 - 30346588
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  30346701 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 30346602  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  30346601 ataattatctacat 30346588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 27381037 - 27380924
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| |||| |||||||||||||||||||||||||    
T  27381037 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacaccatataatcatctcttattaatagta 27380938  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  27380937 ataattatctacat 27380924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 27385007 - 27384894
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| |||| |||||||||||||||||||||||||    
T  27385007 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacaccatataatcatctcttattaatagta 27384908  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  27384907 ataattatctacat 27384894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 10103340 - 10103231
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| |||||  ||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  10103340 acatcatcaagtacacttaacaactcatagatatcaacatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 10103241  T
Q  108 ataattatct 117  Q
    ||||||||||    
T  10103240 ataattatct 10103231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 12902650 - 12902537
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| | || ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||| ||    
T  12902650 acatcatcaagtacacttaacaactcatagatatcattatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatacta 12902551  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  12902550 ataattatctacat 12902537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 31343952 - 31344035
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||| ||||||| ||||||    
T  31343952 acatcatcaagtacacctaacaactcatagatatcttcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 31344035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 9784030 - 9784108
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataat 89  Q
    ||||||||||||||   ||||||||||| ||| | |||| |||||||||||||||||||||||||| ||||||||||||    
T  9784030 catcatcaagtacattaaacaactcatagataacatcatgtaatcatcatcactaataacttaaacaacacaatataat 9784108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 20319727 - 20319664
Alignment:
Q  50 ataatcatcatcac-taataacttaaactacacaatataatcatctcttattaatagtaataat 112  Q
    |||||||||||| | ||||||||||||| |||||||||||| ||| |||| ||||| |||||||    
T  20319727 ataatcatcatctcataataacttaaacaacacaatataatgatcacttaataataataataat 20319664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 6481820 - 6481872
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  6481820 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 6481872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 6485287 - 6485339
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  6485287 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 6485339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 19663600 - 19663548
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  19663600 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 19663548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 20260293 - 20260345
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  20260293 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 20260345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 1009297 - 1009410
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  1009297 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 1009396  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  1009397 ataattatctacat 1009410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 1926839 - 1926726
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  1926839 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 1926740  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  1926739 ataattatctacat 1926726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 16376859 - 16376746
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  16376859 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 16376760  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  16376759 ataattatctacat 16376746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 20925853 - 20925740
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  20925853 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 20925754  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  20925753 ataattatctacat 20925740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 52634303 - 52634416
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  52634303 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagta 52634402  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  52634403 ataattatctacat 52634416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 21406289 - 21406387
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaatagtaat 109  Q
    ||||||||||||||  ||||||||| || ||| | |||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||    
T  21406289 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataacttaaactacacaatataatcatcacttaataataataat 21406387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 22132141 - 22132059
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatc 93  Q
    ||||||||||||||  |||||||||||| ||| | |||| |||||||||||||||||||||||||| ||||||||||||||||    
T  22132141 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataacttaaacaacacaatataatcatc 22132059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 20230181 - 20230090
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaata 104  Q
    ||||||||||||||| |||||||||||| ||| | |||| |||||||||||||||||||||||||||  |||||||||||| | |||| |||||    
T  20230181 catcatcaagtacacttaacaactcatagataacatcatgtaatcatcatcactaataacttaaact--acaatataatcaccacttaataata 20230090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 33796068 - 33796151
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||| ||||||    
T  33796068 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 33796151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 41801321 - 41801239
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatc 93  Q
    ||||||||||||||  |||||||||||| |||   |||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  41801321 catcatcaagtacatttaacaactcatagataatatcatgtaatcatcatcactaataaattaaacaacacaatataatcatc 41801239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 16370961 - 16371013
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  16370961 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 16371013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 6364 - 6251
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||| ||||||||||  |||| ||||||||||||||||||||||||||||||    
T  6364 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcgctaataactttaaaacaacacaatataatcatctcttattaatagta 6265  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  6264 ataattatctacat 6251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 68595 - 68486
Alignment:
Q  14 catcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagtaataa 111  Q
    |||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||    
T  68595 catcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatctcttattaatagtaataa 68496  T
Q  112 ttatctacat 121  Q
    ||||||||||    
T  68495 ttatctacat 68486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 60369 - 60255
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt---aaactacacaatataatcatctcttattaatagt 106  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||   |||| ||||||||||||||||||||||| |||||    
T  60369 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataacttttaaaacaacacaatataatcatctcttattgatagt 60270  T
Q  107 aataattatctacat 121  Q
    |||||||||||||||    
T  60269 aataattatctacat 60255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 10 - 118
Target Start/End: Original strand, 11086 - 11195
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||  |||| |||||| |||||||||||||||||||||||    
T  11086 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaa-ataatcatctcttattaatagta 11184  T
Q  108 ataattatcta 118  Q
    |||||||||||    
T  11185 ataattatcta 11195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 34171 - 34061
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatcatctcttattaatagta 107  Q
    |||||||||||||||| |||||||||||| ||||| |||| |||||||||   ||||||||||  |||| ||||||||||||||||||||||||||||||    
T  34171 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatca---ctaataactttaaaacaacacaatataatcatctcttattaatagta 34075  T
Q  108 ataattatctacat 121  Q
    ||||||||||||||    
T  34074 ataattatctacat 34061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 7003 - 6921
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatc 93  Q
    ||||||||||||||  |||||||||||| ||| | |||| |||||||||||||||||||||||||| ||||||||||||||||    
T  7003 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataacttaaacaacacaatataatcatc 6921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 4010 - 4108
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaatagtaat 109  Q
    ||||||||||||||  ||||||||| || ||| | |||| ||||||| ||||||||||||||||||||||||||||||||||| |||| ||||| ||||    
T  4010 catcatcaagtacatttaacaactcctagataacatcatgtaatcataatcactaataacttaaactacacaatataatcatcacttaataataataat 4108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 1 - 45
Alignment:
Q  54 tcatcatcactaataacttaaactacacaatataatcatctctta 98  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  1 tcatcatcactaataacttaaactacacaatataatcatcactta 45  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 25610 - 25512
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaatagtaat 109  Q
    ||||||||||||||  |||||||||||| ||| | |||| || ||||||||||||||||||||||| |||||||||||||||| |||| ||||| ||||    
T  25610 catcatcaagtacatttaacaactcatagataacatcatgtattcatcatcactaataacttaaacaacacaatataatcatcacttaataataataat 25512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 14879 - 14962
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||  |||| ||||||| ||||||    
T  14879 acatcatcaagtacacttaacaactcatagatatcttcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 21382 - 21299
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataac-ttaaactacacaatataatcatc 93  Q
    ||||||||||||||  |||||||||||| ||| | |||| |||||||||||||||||||| |||||| ||||||||||||||||    
T  21382 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactttaaacaacacaatataatcatc 21299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 62882 - 62786
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaatagtaat 109  Q
    ||||||||||||||  ||||||||| || ||| | |||| |||||||||||||||||||||||||||  |||||||||||||| |||| ||||| ||||    
T  62882 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataacttaaact--acaatataatcatcacttaataataataat 62786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 8612 - 8674
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt 72  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||    
T  8612 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 8674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 18859 - 18941
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatc 93  Q
    ||||||||||||||  |||||||| ||| ||| | ||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  18859 catcatcaagtacatttaacaacttatagataacatcacataatcatcatcactaataactgaaacaacacaatataatcatc 18941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 37240 - 37149
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatctcttattaata 104  Q
    ||||||||||||||  ||||||||| || ||| | |||| |||||||||||||||||||||||||||  |||||||||||||| |||| |||||    
T  37240 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataacttaaact--acaatataatcatcacttaataata 37149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 864 - 781
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    |||||||||||||||| |||||||||||| ||||| ||||  |||||||||||||||||||||  |||| ||||||| ||||||    
T  864 acatcatcaagtacacttaacaactcatagatatcatcatgcaatcatcatcactaataactttaaaacaacacaatgtaatca 781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 109
Target Start/End: Complemental strand, 22359 - 22300
Alignment:
Q  50 ataatcatcatcactaataacttaaactacacaatataatcatctcttattaatagtaat 109  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||| ||||| ||||    
T  22359 ataatcatcatcactaataactcaaactacacaatataatcatcacttaataataataat 22300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 11103 - 11041
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt 72  Q
    ||||||||| |||||| |||||||||||| ||||| |||| ||||||||||||||||||||||    
T  11103 acatcatcaggtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 11041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 8782 - 8700
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatc 93  Q
    |||||||| |||||  ||||||||| || ||| | |||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  8782 catcatcatgtacatttaacaactcgtagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcatc 8700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 74374 - 74292
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataacttaaactacacaatataatcatc 93  Q
    ||||||||||||||  |||||||||||| ||| | |||| |||||||| |||||||||| |||||| |||| |||||||||||    
T  74374 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcttcactaataaattaaacaacaccatataatcatc 74292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 74303 - 74240
Alignment:
Q  47 catataatcatcatcac-taataacttaaactacacaatataatcatctcttattaatagtaat 109  Q
    ||||||||||||||| | |||||||||| || |||||||||||||||| |||| ||||| ||||    
T  74303 catataatcatcatctcataataacttagaccacacaatataatcatcacttaataataataat 74240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 37245 - 37162
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac-taataacttaaactacacaatataatcatc 93  Q
    ||||||||||||||  |||||||||||| ||| | |||| ||||||||||| | |||||||||| || ||||||||||||||||    
T  37245 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatctcataataacttagaccacacaatataatcatc 37162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 11813 - 11895
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataactt--aaactacacaatataatca 91  Q
    ||||||||||||||| |||||||||||| || || |||| ||||||||||||||||||| ||  |||| ||||||| ||||||    
T  11813 catcatcaagtacacttaacaactcatagatttcatcatgtaatcatcatcactaataattttaaaacaacacaatgtaatca 11895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 5860 - 5917
Alignment:
Q  10 acatcatcaagtacacctaacaactcataaatatcttcatataatcatcatcactaataa 69  Q
    |||||||||||||||| |||||||||||  ||||| |||| |||||||||||||||||||    
T  5860 acatcatcaagtacacttaacaactcat--atatcatcatgtaatcatcatcactaataa 5917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1873 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1873
Description:

Target: scaffold1873; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 717 - 777
Alignment:
Q  59 atcactaataacttaaactacacaatataatcatctcttattaatagtaataattatctacat 121  Q
    |||||||||||||||||| |||||||||||||||| ||  |||||| |||||||||| |||||    
T  717 atcactaataacttaaacaacacaatataatcatcact--ttaataataataattatatacat 777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 3558 - 3507
Alignment:
Q  12 atcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    |||||||||||||  |||||||||||||||| | ||| ||||||||||||||    
T  3558 atcatcaagtacatttaacaactcataaataacatcacataatcatcatcac 3507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 236 - 288
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  236 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0842 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 5278 - 5330
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  5278 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 5330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 10864 - 10812
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  10864 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 10812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 109637 - 109689
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  109637 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 109689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 224185 - 224133
Alignment:
Q  11 catcatcaagtacacctaacaactcataaatatcttcatataatcatcatcac 63  Q
    ||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||    
T  224185 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 224133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University