View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7461_high_3 (Length: 461)

Name: NF7461_high_3
Description: NF7461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7461_high_3
NF7461_high_3
[»] scaffold0565 (3 HSPs)
scaffold0565 (80-340)||(9850-10110)
scaffold0565 (80-237)||(9639-9796)
scaffold0565 (380-417)||(9806-9843)
[»] chr4 (79 HSPs)
chr4 (80-317)||(30261257-30261493)
chr4 (80-313)||(47817736-47817969)
chr4 (80-313)||(19451131-19451370)
chr4 (80-308)||(10573085-10573313)
chr4 (43-237)||(45043589-45043784)
chr4 (80-308)||(41496203-41496430)
chr4 (80-257)||(50203074-50203249)
chr4 (80-255)||(8971040-8971216)
chr4 (83-265)||(6991236-6991417)
chr4 (80-237)||(20448037-20448195)
chr4 (80-237)||(44571866-44572024)
chr4 (83-265)||(52162107-52162287)
chr4 (80-237)||(19878646-19878804)
chr4 (81-313)||(45839636-45839865)
chr4 (80-237)||(52848055-52848213)
chr4 (80-237)||(52957791-52957949)
chr4 (80-237)||(40345348-40345506)
chr4 (80-265)||(11364224-11364409)
chr4 (80-237)||(37654408-37654566)
chr4 (80-237)||(1819560-1819718)
chr4 (83-265)||(46392037-46392217)
chr4 (80-263)||(47458362-47458544)
chr4 (83-237)||(56373576-56373733)
chr4 (80-237)||(54042184-54042342)
chr4 (85-312)||(620103-620332)
chr4 (42-237)||(34316182-34316378)
chr4 (83-237)||(29370604-29370759)
chr4 (83-262)||(44868229-44868401)
chr4 (80-237)||(2493100-2493258)
chr4 (80-237)||(19930712-19930870)
chr4 (80-261)||(34413524-34413706)
chr4 (80-237)||(49080478-49080635)
chr4 (43-237)||(41920310-41920505)
chr4 (80-237)||(24940877-24941036)
chr4 (80-237)||(49089462-49089619)
chr4 (81-263)||(56460082-56460267)
chr4 (125-237)||(42605615-42605728)
chr4 (87-237)||(2728399-2728550)
chr4 (118-237)||(18430025-18430145)
chr4 (101-205)||(25123760-25123864)
chr4 (87-265)||(44650893-44651071)
chr4 (80-237)||(50623081-50623240)
chr4 (80-237)||(52253843-52254004)
chr4 (87-237)||(53814498-53814649)
chr4 (80-237)||(29519526-29519684)
chr4 (80-237)||(27653674-27653830)
chr4 (134-237)||(28734650-28734754)
chr4 (80-188)||(37624554-37624662)
chr4 (136-250)||(30780008-30780123)
chr4 (184-313)||(44061096-44061224)
chr4 (80-188)||(25231173-25231281)
chr4 (80-237)||(38991764-38991923)
chr4 (80-237)||(40010873-40011033)
chr4 (80-188)||(52915593-52915701)
chr4 (80-161)||(22220437-22220518)
chr4 (87-152)||(39982108-39982173)
chr4 (87-258)||(7905987-7906148)
chr4 (80-156)||(31917954-31918030)
chr4 (80-188)||(51733545-51733653)
chr4 (80-147)||(4505335-4505402)
chr4 (85-188)||(21864434-21864537)
chr4 (85-188)||(21920295-21920398)
chr4 (80-165)||(27943619-27943705)
chr4 (80-236)||(40837128-40837287)
chr4 (184-244)||(19903197-19903257)
chr4 (105-188)||(38510296-38510379)
chr4 (217-263)||(33034182-33034228)
chr4 (80-165)||(24157183-24157268)
chr4 (80-145)||(44061006-44061071)
chr4 (132-187)||(18053023-18053079)
chr4 (273-317)||(24157312-24157356)
chr4 (118-258)||(36558280-36558423)
chr4 (168-237)||(39984904-39984973)
chr4 (381-416)||(22220284-22220319)
chr4 (378-417)||(29519436-29519475)
chr4 (223-258)||(38510236-38510271)
chr4 (383-417)||(54711036-54711070)
chr4 (119-163)||(50621234-50621278)
chr4 (210-258)||(55338564-55338612)
[»] chr1 (83 HSPs)
chr1 (80-313)||(29567894-29568126)
chr1 (101-317)||(25560789-25561004)
chr1 (81-313)||(26594990-26595221)
chr1 (118-263)||(31699259-31699404)
chr1 (87-237)||(10842785-10842936)
chr1 (88-261)||(27208995-27209168)
chr1 (80-263)||(16757168-16757347)
chr1 (43-237)||(15822995-15823190)
chr1 (80-313)||(18794463-18794694)
chr1 (40-237)||(48025249-48025447)
chr1 (80-237)||(49468706-49468864)
chr1 (80-237)||(44108597-44108757)
chr1 (80-262)||(7191177-7191360)
chr1 (40-237)||(32806933-32807131)
chr1 (80-231)||(9915441-9915593)
chr1 (81-262)||(49900727-49900910)
chr1 (85-236)||(46286814-46286966)
chr1 (100-308)||(2610762-2610963)
chr1 (126-265)||(8894983-8895122)
chr1 (87-308)||(8989565-8989781)
chr1 (80-237)||(31798587-31798746)
chr1 (80-237)||(5463573-5463731)
chr1 (80-237)||(31491765-31491923)
chr1 (80-237)||(48009008-48009166)
chr1 (80-237)||(35847931-35848086)
chr1 (87-237)||(50094234-50094386)
chr1 (80-237)||(46045971-46046129)
chr1 (80-237)||(1740635-1740794)
chr1 (80-195)||(46554796-46554911)
chr1 (88-237)||(52125131-52125281)
chr1 (87-237)||(24611514-24611666)
chr1 (81-308)||(51244761-51244988)
chr1 (83-260)||(33622331-33622515)
chr1 (90-230)||(34110535-34110676)
chr1 (80-237)||(15573605-15573769)
chr1 (100-237)||(43759350-43759488)
chr1 (80-200)||(26755218-26755338)
chr1 (137-265)||(5034-5162)
chr1 (190-308)||(44556995-44557112)
chr1 (80-258)||(34032065-34032233)
chr1 (83-189)||(25487089-25487195)
chr1 (87-161)||(40717368-40717442)
chr1 (169-308)||(46270949-46271087)
chr1 (150-262)||(28538272-28538385)
chr1 (101-237)||(52066285-52066420)
chr1 (80-190)||(39477751-39477860)
chr1 (103-237)||(49426414-49426545)
chr1 (88-237)||(25151821-25151966)
chr1 (87-159)||(27720963-27721035)
chr1 (80-152)||(44258588-44258660)
chr1 (80-188)||(50249308-50249416)
chr1 (80-159)||(12591156-12591235)
chr1 (80-159)||(26352155-26352234)
chr1 (80-165)||(44557112-44557197)
chr1 (105-262)||(9092618-9092772)
chr1 (80-188)||(34047280-34047388)
chr1 (80-161)||(38531369-38531450)
chr1 (168-240)||(5225818-5225890)
chr1 (80-148)||(13408350-13408418)
chr1 (177-237)||(38530834-38530894)
chr1 (88-147)||(14593406-14593465)
chr1 (80-159)||(52024308-52024387)
chr1 (80-154)||(52706880-52706953)
chr1 (80-257)||(11799459-11799636)
chr1 (83-313)||(14373344-14373563)
chr1 (83-160)||(24884416-24884493)
chr1 (82-164)||(46271386-46271468)
chr1 (80-161)||(43358272-43358353)
chr1 (80-144)||(24483386-24483450)
chr1 (209-265)||(33694390-33694446)
chr1 (81-157)||(49402947-49403023)
chr1 (81-161)||(7214108-7214185)
chr1 (80-154)||(30292938-30293012)
chr1 (80-157)||(12484704-12484781)
chr1 (376-416)||(10842988-10843028)
chr1 (273-313)||(28410739-28410779)
chr1 (182-260)||(38947695-38947772)
chr1 (80-161)||(41857311-41857393)
chr1 (379-417)||(49426575-49426613)
chr1 (273-317)||(8565943-8565986)
chr1 (273-317)||(12484555-12484599)
chr1 (81-157)||(39125647-39125723)
chr1 (209-237)||(43358209-43358237)
[»] chr8 (60 HSPs)
chr8 (80-316)||(6374412-6374644)
chr8 (83-317)||(34156535-34156769)
chr8 (136-317)||(40399796-40399975)
chr8 (80-255)||(45358874-45359049)
chr8 (40-237)||(39463217-39463413)
chr8 (80-313)||(9812171-9812403)
chr8 (80-265)||(34796651-34796833)
chr8 (80-237)||(39698663-39698821)
chr8 (83-253)||(514875-515048)
chr8 (80-237)||(40228572-40228730)
chr8 (80-237)||(4760556-4760713)
chr8 (80-237)||(43448714-43448872)
chr8 (87-313)||(5295329-5295554)
chr8 (84-263)||(29312164-29312344)
chr8 (80-263)||(14234187-14234373)
chr8 (40-237)||(17920914-17921113)
chr8 (133-312)||(15750253-15750435)
chr8 (83-237)||(43084624-43084779)
chr8 (80-265)||(15227565-15227753)
chr8 (40-237)||(4989437-4989634)
chr8 (40-237)||(9880498-9880695)
chr8 (43-313)||(6115927-6116197)
chr8 (87-265)||(13496240-13496421)
chr8 (42-237)||(9304631-9304826)
chr8 (100-237)||(31899245-31899383)
chr8 (80-237)||(31693616-31693776)
chr8 (80-237)||(7839456-7839614)
chr8 (118-313)||(13367873-13368065)
chr8 (142-263)||(42179155-42179276)
chr8 (80-237)||(29025746-29025901)
chr8 (80-235)||(44713532-44713688)
chr8 (90-317)||(31233863-31234084)
chr8 (80-265)||(2375816-2375996)
chr8 (101-265)||(41679338-41679495)
chr8 (155-265)||(43970022-43970131)
chr8 (118-207)||(19574423-19574513)
chr8 (80-159)||(37559609-37559688)
chr8 (80-159)||(40362433-40362512)
chr8 (171-237)||(36669791-36669857)
chr8 (88-207)||(19438242-19438363)
chr8 (80-159)||(15160522-15160601)
chr8 (146-250)||(43561387-43561491)
chr8 (85-159)||(36921360-36921434)
chr8 (80-188)||(39765907-39766014)
chr8 (80-159)||(396290-396369)
chr8 (83-312)||(12339712-12339941)
chr8 (81-145)||(40400441-40400505)
chr8 (127-237)||(5790643-5790756)
chr8 (87-157)||(35356312-35356382)
chr8 (102-159)||(17655927-17655984)
chr8 (83-140)||(43594830-43594887)
chr8 (80-159)||(43724379-43724459)
chr8 (103-156)||(44342865-44342918)
chr8 (381-449)||(14234350-14234418)
chr8 (85-145)||(40400066-40400126)
chr8 (88-143)||(1511495-1511550)
chr8 (379-417)||(18673263-18673301)
chr8 (84-129)||(43561341-43561386)
chr8 (87-140)||(43974886-43974939)
chr8 (273-313)||(24245140-24245180)
[»] chr2 (89 HSPs)
chr2 (80-313)||(37038692-37038921)
chr2 (80-241)||(18719426-18719587)
chr2 (80-265)||(18579165-18579345)
chr2 (40-265)||(8539996-8540222)
chr2 (80-312)||(4658156-4658388)
chr2 (80-237)||(38926604-38926762)
chr2 (80-262)||(36685715-36685895)
chr2 (80-237)||(441228-441386)
chr2 (80-261)||(12565954-12566135)
chr2 (87-313)||(19164362-19164584)
chr2 (80-237)||(4288708-4288866)
chr2 (80-237)||(12342091-12342249)
chr2 (80-237)||(29396677-29396835)
chr2 (89-237)||(45081897-45082046)
chr2 (80-237)||(29808810-29808969)
chr2 (80-237)||(32228008-32228166)
chr2 (40-237)||(4132982-4133178)
chr2 (80-300)||(11132548-11132766)
chr2 (147-261)||(33055956-33056070)
chr2 (80-263)||(33482199-33482384)
chr2 (137-262)||(10195730-10195855)
chr2 (80-212)||(29411694-29411826)
chr2 (80-237)||(6220401-6220559)
chr2 (80-237)||(12393916-12394076)
chr2 (80-237)||(13561992-13562150)
chr2 (80-237)||(16807514-16807672)
chr2 (80-237)||(16846795-16846953)
chr2 (80-237)||(25383482-25383639)
chr2 (100-237)||(1423209-1423347)
chr2 (80-237)||(8789427-8789581)
chr2 (85-263)||(40608578-40608753)
chr2 (82-237)||(30855105-30855261)
chr2 (179-313)||(11188172-11188305)
chr2 (177-265)||(27964194-27964282)
chr2 (83-237)||(42004892-42005046)
chr2 (80-237)||(8774054-8774208)
chr2 (80-165)||(4469499-4469584)
chr2 (80-239)||(43971502-43971646)
chr2 (80-188)||(43427334-43427442)
chr2 (118-234)||(43480870-43480986)
chr2 (80-195)||(7028852-7028967)
chr2 (141-242)||(27726412-27726511)
chr2 (80-188)||(45301763-45301871)
chr2 (85-157)||(7644649-7644721)
chr2 (88-180)||(27964425-27964517)
chr2 (87-158)||(16463109-16463180)
chr2 (133-265)||(19469575-19469709)
chr2 (80-159)||(22620410-22620489)
chr2 (93-237)||(42753756-42753903)
chr2 (80-188)||(4051750-4051859)
chr2 (80-240)||(17695830-17695980)
chr2 (80-237)||(36106400-36106554)
chr2 (145-313)||(7872701-7872866)
chr2 (80-156)||(34546410-34546486)
chr2 (81-188)||(5717512-5717618)
chr2 (80-195)||(7042226-7042341)
chr2 (101-313)||(15083091-15083286)
chr2 (80-188)||(28072565-28072676)
chr2 (80-157)||(36177974-36178051)
chr2 (87-182)||(11188545-11188640)
chr2 (87-158)||(14285943-14286014)
chr2 (211-312)||(29412113-29412213)
chr2 (87-165)||(9391628-9391706)
chr2 (175-237)||(19636602-19636664)
chr2 (175-237)||(19835195-19835257)
chr2 (103-188)||(34455011-34455096)
chr2 (200-313)||(14833681-14833794)
chr2 (80-188)||(27986034-27986144)
chr2 (80-258)||(35799201-35799368)
chr2 (133-237)||(42743080-42743184)
chr2 (83-159)||(7874720-7874795)
chr2 (183-263)||(34455793-34455873)
chr2 (80-143)||(16792481-16792544)
chr2 (80-143)||(17703017-17703080)
chr2 (200-262)||(9366147-9366209)
chr2 (80-150)||(10195572-10195642)
chr2 (183-233)||(27726542-27726592)
chr2 (168-237)||(34546145-34546215)
chr2 (80-157)||(35046516-35046593)
chr2 (80-161)||(777768-777851)
chr2 (212-313)||(9391515-9391616)
chr2 (273-317)||(43971966-43972010)
chr2 (227-265)||(4469591-4469629)
chr2 (175-237)||(18717170-18717232)
chr2 (82-188)||(45423618-45423724)
chr2 (380-449)||(4840858-4840927)
chr2 (80-133)||(14833837-14833890)
chr2 (273-302)||(18719259-18719288)
chr2 (273-313)||(12565393-12565433)
[»] chr6 (45 HSPs)
chr6 (100-317)||(3988663-3988878)
chr6 (80-265)||(9940646-9940831)
chr6 (87-263)||(12459290-12459466)
chr6 (81-314)||(13503765-13504002)
chr6 (80-237)||(234032-234190)
chr6 (80-265)||(577059-577245)
chr6 (86-317)||(13011266-13011495)
chr6 (80-237)||(24163711-24163869)
chr6 (88-313)||(17552169-17552392)
chr6 (80-317)||(31233540-31233780)
chr6 (118-237)||(1134961-1135081)
chr6 (80-313)||(18737010-18737245)
chr6 (80-215)||(32193700-32193835)
chr6 (87-237)||(29713403-29713554)
chr6 (147-265)||(1502722-1502840)
chr6 (147-265)||(17828348-17828466)
chr6 (87-257)||(12322861-12323032)
chr6 (80-237)||(31443442-31443601)
chr6 (168-312)||(20226144-20226287)
chr6 (168-312)||(22120128-22120271)
chr6 (80-237)||(23259322-23259480)
chr6 (87-237)||(19674985-19675134)
chr6 (151-317)||(21271321-21271485)
chr6 (83-237)||(24555924-24556080)
chr6 (80-157)||(10520717-10520794)
chr6 (147-313)||(16127932-16128094)
chr6 (175-263)||(32619796-32619884)
chr6 (83-265)||(12588527-12588708)
chr6 (40-159)||(29399904-29400023)
chr6 (179-308)||(8957865-8957995)
chr6 (179-308)||(8961362-8961492)
chr6 (109-232)||(17267609-17267733)
chr6 (199-313)||(32193927-32194039)
chr6 (139-229)||(10540481-10540572)
chr6 (88-186)||(12063558-12063657)
chr6 (80-313)||(4850428-4850650)
chr6 (87-154)||(8030647-8030714)
chr6 (175-262)||(3847745-3847832)
chr6 (80-195)||(19600419-19600534)
chr6 (175-237)||(10520387-10520449)
chr6 (100-156)||(34513682-34513738)
chr6 (209-256)||(13597932-13597979)
chr6 (118-159)||(19689366-19689407)
chr6 (80-157)||(21272180-21272257)
chr6 (80-157)||(32429282-32429359)
[»] chr5 (70 HSPs)
chr5 (87-313)||(11977593-11977818)
chr5 (83-263)||(27797782-27797957)
chr5 (86-313)||(34534364-34534589)
chr5 (83-265)||(36164888-36165070)
chr5 (83-237)||(3306006-3306161)
chr5 (80-237)||(34446024-34446182)
chr5 (40-313)||(38369831-38370102)
chr5 (88-265)||(843027-843201)
chr5 (80-237)||(2729783-2729941)
chr5 (80-237)||(39566181-39566339)
chr5 (83-313)||(13974278-13974504)
chr5 (80-237)||(6518974-6519133)
chr5 (80-237)||(26660753-26660910)
chr5 (80-237)||(26932346-26932503)
chr5 (81-313)||(15166935-15167164)
chr5 (118-313)||(14161822-14162018)
chr5 (83-237)||(42661937-42662091)
chr5 (80-237)||(42104060-42104218)
chr5 (118-313)||(1309281-1309475)
chr5 (81-262)||(38362110-38362291)
chr5 (87-237)||(14620491-14620642)
chr5 (175-312)||(7736467-7736604)
chr5 (147-316)||(21634177-21634344)
chr5 (147-316)||(21642424-21642591)
chr5 (80-237)||(4424975-4425130)
chr5 (80-237)||(21375647-21375806)
chr5 (80-250)||(7721094-7721263)
chr5 (118-237)||(39335200-39335321)
chr5 (101-238)||(14005911-14006049)
chr5 (80-237)||(21319309-21319465)
chr5 (80-237)||(39504720-39504881)
chr5 (80-192)||(13761555-13761668)
chr5 (134-263)||(41645292-41645417)
chr5 (87-237)||(8336404-8336557)
chr5 (126-263)||(28591596-28591735)
chr5 (83-188)||(4630866-4630971)
chr5 (175-316)||(4911029-4911175)
chr5 (80-157)||(7579947-7580024)
chr5 (87-258)||(35765887-35766048)
chr5 (83-237)||(29807311-29807469)
chr5 (80-263)||(11195079-11195256)
chr5 (80-237)||(27600397-27600550)
chr5 (40-159)||(7316986-7317105)
chr5 (80-188)||(10344979-10345087)
chr5 (83-244)||(24281098-24281262)
chr5 (83-244)||(24380949-24381113)
chr5 (80-159)||(43584452-43584532)
chr5 (80-258)||(3024918-3025086)
chr5 (147-237)||(39730011-39730102)
chr5 (87-165)||(21195384-21195462)
chr5 (177-237)||(42978070-42978130)
chr5 (83-241)||(7748891-7749049)
chr5 (80-211)||(34208917-34209052)
chr5 (118-237)||(34972647-34972759)
chr5 (149-315)||(27557741-27557901)
chr5 (80-144)||(24280991-24281055)
chr5 (80-144)||(24381157-24381221)
chr5 (80-157)||(9066501-9066578)
chr5 (184-237)||(13761823-13761876)
chr5 (185-249)||(7579579-7579643)
chr5 (80-188)||(25362847-25362955)
chr5 (88-157)||(36073708-36073777)
chr5 (80-164)||(4911221-4911305)
chr5 (111-159)||(32158589-32158637)
chr5 (95-157)||(891091-891154)
chr5 (199-258)||(32158649-32158708)
chr5 (83-157)||(40776653-40776728)
chr5 (379-417)||(29044696-29044734)
chr5 (383-417)||(38982066-38982100)
chr5 (119-163)||(7736226-7736270)
[»] chr3 (71 HSPs)
chr3 (80-313)||(30315307-30315540)
chr3 (40-313)||(36844662-36844934)
chr3 (83-265)||(9189402-9189584)
chr3 (80-263)||(30934778-30934958)
chr3 (43-265)||(19373547-19373769)
chr3 (81-314)||(38140949-38141181)
chr3 (80-313)||(42071983-42072215)
chr3 (80-237)||(38016373-38016530)
chr3 (41-237)||(45213716-45213911)
chr3 (80-265)||(48903284-48903469)
chr3 (87-263)||(40487833-40488009)
chr3 (87-237)||(30431125-30431276)
chr3 (80-237)||(33194025-33194183)
chr3 (80-237)||(44676219-44676377)
chr3 (80-237)||(47895338-47895496)
chr3 (80-235)||(50088312-50088468)
chr3 (43-237)||(51397971-51398166)
chr3 (80-237)||(2458005-2458164)
chr3 (80-237)||(47137961-47138121)
chr3 (80-237)||(30426317-30426476)
chr3 (80-237)||(11393543-11393701)
chr3 (80-237)||(23525310-23525468)
chr3 (80-237)||(31853556-31853714)
chr3 (81-237)||(36460805-36460961)
chr3 (80-237)||(53200675-53200832)
chr3 (40-225)||(35557764-35557950)
chr3 (80-227)||(48901718-48901865)
chr3 (80-237)||(3152801-3152958)
chr3 (107-237)||(45566824-45566955)
chr3 (87-215)||(36729826-36729955)
chr3 (81-262)||(8817139-8817321)
chr3 (80-188)||(50646154-50646262)
chr3 (82-237)||(38363785-38363947)
chr3 (80-237)||(41287490-41287651)
chr3 (127-240)||(50346670-50346783)
chr3 (41-187)||(4392155-4392302)
chr3 (80-188)||(50038215-50038323)
chr3 (81-317)||(7230810-7231047)
chr3 (80-195)||(22857088-22857203)
chr3 (80-237)||(32492176-32492333)
chr3 (41-237)||(33024294-33024491)
chr3 (80-163)||(11019895-11019978)
chr3 (118-242)||(27067644-27067766)
chr3 (80-161)||(39356883-39356964)
chr3 (168-237)||(39359007-39359076)
chr3 (80-237)||(41850388-41850537)
chr3 (135-237)||(13756867-13756970)
chr3 (43-188)||(31583478-31583623)
chr3 (43-159)||(4758952-4759068)
chr3 (118-254)||(40717648-40717785)
chr3 (80-188)||(42571573-42571681)
chr3 (132-237)||(36381366-36381474)
chr3 (80-165)||(47823518-47823603)
chr3 (80-258)||(19115385-19115552)
chr3 (177-313)||(3985946-3986079)
chr3 (177-237)||(39168802-39168862)
chr3 (108-258)||(45460689-45460832)
chr3 (108-202)||(51481961-51482056)
chr3 (204-258)||(30680797-30680850)
chr3 (88-138)||(52654310-52654360)
chr3 (80-258)||(42886749-42886915)
chr3 (199-262)||(47823388-47823449)
chr3 (273-312)||(11337543-11337582)
chr3 (198-237)||(36729766-36729805)
chr3 (233-313)||(22857207-22857286)
chr3 (379-417)||(44645290-44645328)
chr3 (277-314)||(24357244-24357281)
chr3 (132-161)||(24357465-24357494)
chr3 (180-237)||(45391952-45392008)
chr3 (81-114)||(49877155-49877188)
chr3 (277-317)||(54918276-54918316)
[»] chr7 (74 HSPs)
chr7 (40-265)||(40339417-40339642)
chr7 (83-262)||(10476137-10476316)
chr7 (87-314)||(28289220-28289446)
chr7 (87-309)||(37490789-37491013)
chr7 (80-237)||(42879929-42880087)
chr7 (80-258)||(48843550-48843731)
chr7 (80-265)||(40753398-40753581)
chr7 (84-313)||(6563339-6563563)
chr7 (43-237)||(37815685-37815880)
chr7 (80-263)||(21819282-21819464)
chr7 (80-262)||(19104972-19105154)
chr7 (80-237)||(1741989-1742147)
chr7 (80-237)||(13405122-13405280)
chr7 (80-237)||(22297994-22298152)
chr7 (80-237)||(45948625-45948783)
chr7 (80-239)||(24133122-24133283)
chr7 (80-237)||(27947496-27947654)
chr7 (87-265)||(29636194-29636373)
chr7 (83-194)||(30312459-30312570)
chr7 (87-261)||(21752083-21752257)
chr7 (80-237)||(24680126-24680284)
chr7 (100-237)||(31418508-31418646)
chr7 (80-237)||(35777817-35777975)
chr7 (80-265)||(1031153-1031338)
chr7 (80-237)||(23935420-23935577)
chr7 (80-237)||(29530930-29531088)
chr7 (80-252)||(33939714-33939887)
chr7 (80-237)||(45933584-45933737)
chr7 (83-237)||(44453136-44453289)
chr7 (80-237)||(27935765-27935923)
chr7 (118-312)||(8292990-8293183)
chr7 (80-193)||(8603973-8604086)
chr7 (87-237)||(48684728-48684879)
chr7 (83-232)||(7759263-7759410)
chr7 (184-312)||(34012559-34012686)
chr7 (137-313)||(47461296-47461469)
chr7 (80-263)||(45499793-45499980)
chr7 (80-313)||(42285906-42286128)
chr7 (80-237)||(41137726-41137884)
chr7 (177-313)||(19303315-19303450)
chr7 (80-159)||(715937-716016)
chr7 (169-313)||(25055869-25056010)
chr7 (40-206)||(4268569-4268736)
chr7 (80-313)||(12977617-12977839)
chr7 (175-265)||(7335373-7335464)
chr7 (125-239)||(31196613-31196725)
chr7 (80-258)||(34274792-34274960)
chr7 (80-237)||(36807933-36808090)
chr7 (83-188)||(31929905-31930010)
chr7 (80-220)||(42753706-42753843)
chr7 (40-188)||(44567086-44567234)
chr7 (147-262)||(24780289-24780405)
chr7 (80-164)||(34012159-34012243)
chr7 (168-237)||(23155457-23155525)
chr7 (83-188)||(25440873-25440978)
chr7 (182-237)||(10599464-10599519)
chr7 (221-313)||(4268871-4268962)
chr7 (81-161)||(10599212-10599292)
chr7 (80-313)||(18292333-18292555)
chr7 (230-308)||(30312683-30312760)
chr7 (108-180)||(33682555-33682627)
chr7 (87-159)||(37502324-37502396)
chr7 (219-265)||(4268790-4268836)
chr7 (179-265)||(47187749-47187835)
chr7 (80-159)||(6747225-6747303)
chr7 (87-157)||(18270582-18270653)
chr7 (80-317)||(2297036-2297267)
chr7 (83-140)||(39557323-39557380)
chr7 (279-315)||(29635858-29635894)
chr7 (381-416)||(18270775-18270810)
chr7 (124-165)||(8604076-8604117)
chr7 (212-265)||(25086865-25086918)
chr7 (197-237)||(7795238-7795278)
chr7 (379-415)||(39557273-39557309)
[»] scaffold0294 (1 HSPs)
scaffold0294 (87-237)||(3501-3652)
[»] scaffold0182 (1 HSPs)
scaffold0182 (87-261)||(18228-18402)
[»] scaffold0110 (1 HSPs)
scaffold0110 (80-237)||(24737-24895)
[»] scaffold0983 (1 HSPs)
scaffold0983 (80-312)||(611-841)
[»] scaffold0026 (1 HSPs)
scaffold0026 (83-239)||(4141-4298)
[»] scaffold0502 (1 HSPs)
scaffold0502 (83-254)||(552-723)
[»] scaffold0300 (1 HSPs)
scaffold0300 (87-313)||(4570-4793)
[»] scaffold0015 (1 HSPs)
scaffold0015 (43-237)||(21078-21273)
[»] scaffold0048 (1 HSPs)
scaffold0048 (80-237)||(62631-62789)
[»] scaffold0136 (2 HSPs)
scaffold0136 (138-242)||(9600-9705)
scaffold0136 (107-153)||(9470-9516)
[»] scaffold2107 (2 HSPs)
scaffold2107 (83-159)||(589-665)
scaffold2107 (381-451)||(643-713)
[»] scaffold0332 (1 HSPs)
scaffold0332 (80-188)||(3857-3965)
[»] scaffold0078 (1 HSPs)
scaffold0078 (80-189)||(1458-1568)


Alignment Details
Target: scaffold0565 (Bit Score: 184; Significance: 2e-99; HSPs: 3)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 80 - 340
Target Start/End: Complemental strand, 10110 - 9850
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataatttttt-cttttcaattgtacccttcaattaatactatatacggtacttcaaaag 178  Q
    ||||||||||||||||||| |||||| |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||  ||||||||||     
T  10110 ttgttttaaaatgaatgtcactttcaattttcaatactataataatttttttcttttcaattgtacccttcaattagtactatatacaatacttcaaaaa 10011  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatata 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||       ||||||    
T  10010 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatctttttttcttttaattaatgca-ttttttaatata 9912  T
Q  279 tgtgtaaaaactttaaacgacattcattttgaaacagagcgaggaaaatacaatggtagtat 340  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  9911 tgtgtaaaaactttaaacgacattcattttgaaacagagcgagtataatacaatggtagtat 9850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 9796 - 9639
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||||||||||||||||  ||||||||| |||| | ||||||| ||||||||||||||||||||||||||||||||||||  |||  |||||| |||     
T  9796 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaa- 9698  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| |||||||||   |||||||||||| ||||||||||||||||    
T  9697 tattattttttctttaatgaaaaacaactcaatagttgattatgataatttggtaaaat 9639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 417
Target Start/End: Complemental strand, 9843 - 9806
Alignment:
Q  380 taatacttcatccgtttcaaaatgactgtcgttttagc 417  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  9843 taatatttcctccgtttcaaaatgactgtcgttttagc 9806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 9e-71; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 80 - 317
Target Start/End: Original strand, 30261257 - 30261493
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||| |||||||||| |||| | |||||||| |||||||||||||||||||||||||||||||||||||||  |||||  |||||    
T  30261257 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatgttttcttttcaattgtacccttcaattaatactatatacattactttcaaagt 30261356  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatat 279  Q
    |||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||| ||| ||||||| |||||||| |       ||||| |    
T  30261357 attattttttctttaatgaaaaacaaaccaatagttgattaaaataatttggtaaaataacatctctctttctttaaattaatgta-tttcttaatatgt 30261455  T
Q  280 gtgtaaaaactttaaacgacattcattttgaaacagag 317  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  30261456 gtgtaaaaactttaaacgatattcattttgaaacagag 30261493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 80 - 313
Target Start/End: Original strand, 47817736 - 47817969
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| ||||||||| |  |||||||||| |||| | ||||||| ||||||||||||||||||||||||||||||||||||||||  |||||| |||||    
T  47817736 ttgtttcaaaatgaatttaactttcagtttgcaatgcaataataactttttcttttcaattgtacccttcaattaatactatatacactacttccaaagt 47817835  T
Q  180 atta-ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatata 278  Q
    |||| |||||||||||| ||||||||||| |||||||||||| ||||| ||||||||||||||| ||| ||||||||||||||||||       |||||     
T  47817836 attatttttttctttaatgaaaaacaaaccaatagttgattatgataaattggtaaaataacatctctctttcttttaattaatgca-tttcttaatatg 47817934  T
Q  279 tgtgtaaaaactttaaacgacattcattttgaaac 313  Q
    ||| ||||||  |||||||||||||||||||||||    
T  47817935 tgtataaaaaacttaaacgacattcattttgaaac 47817969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 80 - 313
Target Start/End: Complemental strand, 19451370 - 19451131
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatac-------tatatacggtactt 172  Q
    |||||| |||||||||||| |||||||||| |||| | ||||||| |||||||||||||||||||||||||||||||||       |||||||  |||||    
T  19451370 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaataccatatagtatatacactactt 19451271  T
Q  173 caaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnn 272  Q
    | ||||||||||||||||||||| ||||||||||| |||| ||||||| | || |||||||||||||||| ||| ||||||||||||||||||           
T  19451270 ccaaagtattattttttctttaatgaaaaacaaaccaataattgattaggctattttggtaaaataacatctctctttcttttaattaatgca-tttctt 19451172  T
Q  273 aatatatgtgtaaaaactttaaacgacattcattttgaaac 313  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  19451171 aatatgtgtgtaaaaactttaaacaacattcattttgaaac 19451131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 80 - 308
Target Start/End: Complemental strand, 10573313 - 10573085
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| ||||||||||||  ||| ||||| |||| | ||||||| ||||||||||||||||||||||||||||||||||||||||  |||||| |||||    
T  10573313 ttgtttcaaaatgaatgtcatttttagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatatacaatacttccaaagt 10573214  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatat 279  Q
    ||||||||||| |||| ||||| ||||  |||||||||||| ||||||||||||||||||||| ||| |||||||||| ||||| |       ||||| |    
T  10573213 attattttttcattaatgaaaatcaaatcaatagttgattaggataatttggtaaaataacatctctctttcttttaaataatgtatttttttaatatgt 10573114  T
Q  280 gtgtaaaaactttaaacgacattcatttt 308  Q
    |||||||||  ||||||||||||||||||    
T  10573113 gtgtaaaaatcttaaacgacattcatttt 10573085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 43 - 237
Target Start/End: Complemental strand, 45043784 - 45043589
Alignment:
Q  43 tccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgt 142  Q
    ||||||||| |||||||||||||||| |         ||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||    
T  45043784 tccgttttaaaatgagtgtcgttttatttaaaaaaaattgttttaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattgt 45043685  T
Q  143 acccttcaattaatactat-atacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||||||||||||  |||  |||||| ||| ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  45043684 acccttcaattaatactatgttacactacttccaaaatattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 45043589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 80 - 308
Target Start/End: Original strand, 41496203 - 41496430
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| ||||| ||| || ||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||| |||||||  |||| | ||| |    
T  41496203 ttgtttcaaaataaatctcactttcagttttcaatacaataataactttttcttttcaattgtactcttcaattaatattatatacactactcccaaaat 41496302  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatat 279  Q
    ||||||| ||||| ||  |||||||||| |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||| ||       ||||| |    
T  41496303 attatttattcttcaataaaaaacaaacaaatagttgattaggataatttggtgaaataacatttctatttcttttaattaataca-ttttttaatatgt 41496401  T
Q  280 gtgtaaaaactttaaacgacattcatttt 308  Q
    |||||||||| |||||||| |||||||||    
T  41496402 gtgtaaaaaccttaaacgatattcatttt 41496430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 80 - 257
Target Start/End: Original strand, 50203074 - 50203249
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    ||||||||||||||||||| ||||||||   |||| | ||||||| |||||||||||||||||||||||||||||||| |||||||  ||||||||||||    
T  50203074 ttgttttaaaatgaatgtcactttcagtc--caatgcaataataactttttcttttcaattgtacccttcaattaatattatatacattacttcaaaagt 50203171  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaa 257  Q
    |||||||||||||||| ||||||||||  |||||||||||| ||||||||||| ||||||||| | | ||||||||||    
T  50203172 attattttttctttaatgaaaaacaaatcaatagttgattatgataatttggtgaaataacatatttctttcttttaa 50203249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 80 - 255
Target Start/End: Original strand, 8971040 - 8971216
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    ||||||||||||||  ||| |||||||||||||||   ||||||||||||||||||||||||||| |||||||||||| |||||||  |||||| |||||    
T  8971040 ttgttttaaaatgaccgtcactttcagttttcaatgaaataataattttttcttttcaattgtactcttcaattaataatatatacactacttccaaagt 8971139  T
Q  180 atta-ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttctttt 255  Q
    |||| |||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||| || ||||||| ||||    
T  8971140 attatttttttctttaatgaaaaacaaaccaatagtttattaagataatttggtaaaataaaatctctttttttttt 8971216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 83 - 265
Target Start/End: Complemental strand, 6991417 - 6991236
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatt 182  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| |||||||  || ||  ||||||||    
T  6991417 ttttaaaatgaatgtcactttcagttttcaatacaataataattttttcttttcaat-gtacccttcagttaatattatatacactattttcaaagtatt 6991319  T
Q  183 attttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    |||||||||||||  ||||| |||| ||||||||| || |||||||||||| ||||| || ||| ||||||||||||||||||    
T  6991318 attttttctttaataaaaaataaaccaatagttgactaggataatttggtataataaaatatctctttcttttaattaatgca 6991236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 20448037 - 20448195
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||  |||  |||||| ||||    
T  20448037 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattatacccttcaattaatactatgttacactacttccaaag 20448136  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||| ||||| |||||||||||| ||||||||||||||||    
T  20448137 tattattttttctttaatgaaaatcaaaccaatagttgattaggataatttggtaaaat 20448195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 44572024 - 44571866
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||||||||||||||||||||||||||| |||| | |||| || |||||||||||||||||||||||||||||||| |||  |||  |||||| ||||    
T  44572024 ttgttttaaaatgaatgtcgctttcagtttccaatgcaataaaaactttttcttttcaattgtacccttcaattaataatatgttacactacttccaaag 44571925  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||    
T  44571924 tattattttttctttaatgaaaaataaaccaatagttgattaagataatttggtaaaat 44571866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 83 - 265
Target Start/End: Original strand, 52162107 - 52162287
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatt 182  Q
    |||||||||||||||| |||||| |||||||  | |||||||||||||  ||| |||| ||||||||||||||||||| ||||  || ||| ||||||||    
T  52162107 ttttaaaatgaatgtcactttcaattttcaacgcaataataatttttt--tttgaattatacccttcaattaatactaaatacactagttccaaagtatt 52162204  T
Q  183 attttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    ||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||| |||  ||||||||| |||||||    
T  52162205 attttttctttaatgaaaaacaaaccaatatttgattaagataatttggtaaaataacatctctagttcttttaactaatgca 52162287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 19878646 - 19878804
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||||||| |||| | ||||||| |||||||||||||||||||||||||||| |||||||  |||  |||||| ||||    
T  19878646 ttgtttgaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaatttatactatgttacactacttccaaag 19878745  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  19878746 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 19878804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 81 - 313
Target Start/End: Original strand, 45839636 - 45839865
Alignment:
Q  81 tgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagta 180  Q
    |||||| ||||||||||| ||||||||||  ||||| ||||||| ||||| |||||||||||||| ||||||||||| |||||||  |||||| ||||||    
T  45839636 tgttttgaaatgaatgtcactttcagtttctaatacaataataactttttattttcaattgtaccattcaattaatattatatacattacttccaaagta 45839735  T
Q  181 tta-ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatat 279  Q
    ||| |||||||||||| ||||||||||  ||| |||||||| ||||||||||||||||||  ||||| |||||||||| |||||||          || |    
T  45839736 ttatttttttctttaatgaaaaacaaatcaattgttgattaggataatttggtaaaataatttttctctttcttttaa-taatgcatttctta---attt 45839831  T
Q  280 gtgtaaaaactttaaacgacattcattttgaaac 313  Q
    ||||||||||||||||||||||||||||| ||||    
T  45839832 gtgtaaaaactttaaacgacattcattttaaaac 45839865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 52848213 - 52848055
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    ||||||||||||||||||| |||||| ||| |||| | |||||||||||||||||||||||||||||||||||||||| |||  |||  |||||| ||||    
T  52848213 ttgttttaaaatgaatgtcactttcaatttccaatgcaataataattttttcttttcaattgtacccttcaattaatattatgttacactacttccaaag 52848114  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||| | |||||||||||| ||||||||||||||||    
T  52848113 tattattttttctttaatgaaaaacaagccaatagttgattaggataatttggtaaaat 52848055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 52957949 - 52957791
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||||||| |||| | ||||||| |||||||||||||||||||||||||||||||| ||| | ||  |||||| ||||    
T  52957949 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatattatgttacactacttccaaag 52957850  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  52957849 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 52957791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 40345506 - 40345348
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||  |||  |||||| ||||    
T  40345506 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatactatgttacactacttccaaag 40345407  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||| | ||||||||||  |||||||||| |||||||||||| ||||||||||||||||    
T  40345406 tattgtattttctttaataaaaaacaaaccaatagttgattaggataatttggtaaaat 40345348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 80 - 265
Target Start/End: Original strand, 11364224 - 11364409
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    ||||||||| |||||||   ||||| ||||| |||   ||||||| |||||||||||||||||||||||||||||||| ||||||   |||||| |||||    
T  11364224 ttgttttaagatgaatgatactttcggtttttaatgaaataataactttttcttttcaattgtacccttcaattaatattatatatactacttccaaagt 11364323  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    |||||||| |||| || ||||||||||| |||| || |||||||||||||||||||||||||| ||  ||||||||||||||||||    
T  11364324 attattttctcttcaatgaaaaacaaaccaataattaattaagataatttggtaaaataacatatccctttcttttaattaatgca 11364409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 37654408 - 37654566
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||||||||||||||||  || |||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||  |||  |||||| ||||    
T  37654408 ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaag 37654506  T
Q  179 tattattttttctttaa-ggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| | |||||||||| |||||||||||| ||||||||||||||||    
T  37654507 tattattttttctttaatgaaaaaacaaaccaatagttgattaggataatttggtaaaat 37654566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 1819560 - 1819718
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||||||| |||| | ||||||| ||||||||||||||||||||||||||||||||||||  |||  |||||  ||||    
T  1819560 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaatttttcttttcaattgtacccttcaattaatactatgttacactactttcaaag 1819659  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| |||||| |||  |||||||||||| ||||||||||||||||    
T  1819660 tattattttttctttaatgaaaaataaatcaatagttgattaggataatttggtaaaat 1819718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 83 - 265
Target Start/End: Complemental strand, 46392217 - 46392037
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatt 182  Q
    ||||||||||  |||| |||||| |||||||  | ||||||||||||||||||||||| |||| ||||||||||| ||| |||  |||||| ||||||||    
T  46392217 ttttaaaatggctgtcactttcacttttcaaagcaataataattttttcttttcaattatacctttcaattaata-tatttacactacttccaaagtatt 46392119  T
Q  183 attttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    ||||||| |||||   ||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||    
T  46392118 attttttatttaatagaaaacaaaccaatagttgattaggataatttggtaaaattacatttctttttctttt-attaatgca 46392037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 80 - 263
Target Start/End: Complemental strand, 47458544 - 47458362
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataata-attttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaag 178  Q
    ||||||||||||||||||  || | || ||||||| | ||||||  ||||||||||||||||||||| |||||||||||||||||||  |||||  ||||    
T  47458544 ttgttttaaaatgaatgtaactcttag-tttcaatgcaataatattttttttcttttcaattgtaccattcaattaatactatatacattacttttaaag 47458446  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatg 263  Q
    ||||| ||||||||||| |||||||||||  ||||||||||| ||||||||||||||||||||| | | ||||||||||||||||    
T  47458445 tatta-tttttctttaacgaaaaacaaacatatagttgattaggataatttggtaaaataacatctgtctttcttttaattaatg 47458362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 83 - 237
Target Start/End: Complemental strand, 56373733 - 56373576
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat---acggtacttcaaaagt 179  Q
    ||||||||||||| |  ||||||||||  ||||  |||||||||||||||||||||||||||||||||||||||| |||||   ||  |||||| |||||    
T  56373733 ttttaaaatgaatattactttcagtttctaatataataataattttttcttttcaattgtacccttcaattaatattatatgttacactacttccaaagt 56373634  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||||||||| |||||||||| |||| |||||||| ||||||||||||||||    
T  56373633 attattttttctttaatgaaaaacaaaataattgttgattaggataatttggtaaaat 56373576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 54042342 - 54042184
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    ||||||||||||||||||| ||||| |||| ||||   |||||||||||||||||||||||||||| |||||||||||| ||  |||  |||||| ||||    
T  54042342 ttgttttaaaatgaatgtcactttcggtttccaatgtaataataattttttcttttcaattgtacctttcaattaataccatgttacactacttccaaag 54042243  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||| ||||||||| ||||||||||| |||||||||||| ||||||||| ||||||    
T  54042242 tattattatttctttaatgaaaaacaaaccaatagttgattatgataatttgataaaat 54042184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 85 - 312
Target Start/End: Complemental strand, 620332 - 620103
Alignment:
Q  85 ttaaaatgaatgtcgctttcagttttcaatacgataataatttttt-cttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatta 183  Q
    ||||||||||| ||  ||| |||||  ||| | ||||||||||||| ||||||||||||||||||||||||||||| |||||  |||||| |||||||||    
T  620332 ttaaaatgaatatcagtttaagtttctaatgcaataataatttttttcttttcaattgtacccttcaattaatactctatacattacttccaaagtatta 620233  T
Q  184 tttttt--ctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgt 281  Q
    ||||||   ||||| ||||||||||  ||||||||||||| |||||||||||||||||||| |||  |||||||||| |||  |       |||||||||    
T  620232 tttttttcttttaaagaaaaacaaatcaatagttgattaaaataatttggtaaaataacatctctccttcttttaataaatata-ttttttaatatatgt 620134  T
Q  282 gtaaaaactttaaacgacattcattttgaaa 312  Q
    |||||||| |||||||||| | |||||||||    
T  620133 gtaaaaaccttaaacgacaattattttgaaa 620103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 42 - 237
Target Start/End: Original strand, 34316182 - 34316378
Alignment:
Q  42 ctccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattg 141  Q
    |||||||||| |||||||||||||||| |         || ||||||||| |||||| |||||||||| |||| | ||||||||||||| ||||||||||    
T  34316182 ctccgttttaaaatgagtgtcgttttaattaaacaaaattattttaaaataaatgtcactttcagtttccaatgcaataataattttttattttcaattg 34316281  T
Q  142 tacccttcaattaatactata-tacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||||||||| |||| | |  |||||| |||| |||||| ||||||||| ||||||||||  |||||||||||| ||||||||||||||||    
T  34316282 tacccttcaattaatattatattgcactacttccaaaggattattctttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 34316378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 83 - 237
Target Start/End: Original strand, 29370604 - 29370759
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgta-cccttcaattaatactata-tacggtacttcaaaagta 180  Q
    ||||||||| |||||| ||||||||||||||||  ||||||| |||||||||||||||||| || |||||||||||||| | |||  |||||| ||||||    
T  29370604 ttttaaaataaatgtcactttcagttttcaatataataataactttttcttttcaattgtatcctttcaattaatactaaattacactacttccaaagta 29370703  T
Q  181 ttattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||| ||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  29370704 tta-tttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 29370759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 83 - 262
Target Start/End: Complemental strand, 44868401 - 44868229
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatt 182  Q
    |||||||||||||||| |||||| |||||||||      ||| |||||||||||||||||||| ||||||||||| |||||||  |||||| ||| ||||    
T  44868401 ttttaaaatgaatgtcactttcaattttcaata------taactttttcttttcaattgtaccattcaattaataatatatacattacttccaaaatatt 44868308  T
Q  183 attttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaat 262  Q
    ||||| ||||||| | ||||||||  |||||||||||| || ||||||||||||||||| |||||||| |||||||||||    
T  44868307 attttatctttaatggaaaacaaatcaatagttgattaggacaatttggtaaaataacaattcttttt-ttttaattaat 44868229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 2493100 - 2493258
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||| ||| |||||| ||| |||| | ||||||||||||||||||||||||||||||||||||||||||||  |||  |||||| || |    
T  2493100 ttgtttcaaaatgaaagtcactttcattttccaatgcaataataattttttcttttcaattgtacccttcaattaatactatgttacattacttccaagg 2493199  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||| |||||||||| ||||||||| | |||||||||||| |||||| |||||||||    
T  2493200 tattatcttttctttaatgaaaaacaacccaatagttgattaggataatctggtaaaat 2493258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 19930712 - 19930870
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||| ||| | || | ||||||| |||||||||||||||||||||||||||||||| |||  |||  |||||| |||     
T  19930712 ttgtttcaaaatgaatgtcactttcaatttccgatgcaataataactttttcttttcaattgtacccttcaattaatattatgttacactacttccaaaa 19930811  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||| |||||| ||||||||||| |||||||||||||||||||||| ||||||    
T  19930812 tattatttttcctttaatgaaaaacaaaccaatagttgattaagataatttgataaaat 19930870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 80 - 261
Target Start/End: Complemental strand, 34413706 - 34413524
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| ||||| |||||| |||||| |||  ||| | ||||||| ||||| |||||||||||||| ||||||||||| |||||||  |||||| ||| |    
T  34413706 ttgtttcaaaataaatgtcactttcaatttcaaatgcaataataactttttattttcaattgtaccattcaattaatattatatacactacttctaaaat 34413607  T
Q  180 attatttttt-ctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaa 261  Q
    |||||||||| |||||| ||||||  ||| ||||||||||||  ||||||| |||||||||||||||| ||||||||||||||    
T  34413606 attatttttttctttaatgaaaaaagaaccaatagttgattagcataatttagtaaaataacatttctctttcttttaattaa 34413524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 49080635 - 49080478
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    |||||| |||||||||||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||||||||||||| ||| | ||  ||||||  |||    
T  49080635 ttgtttcaaaatgaatgtcactttcagtttt-aatgcaataataactttttattttcaattgtacccttcaattaatattatgttacactacttccgaag 49080537  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||||  |||||||||||| ||||||||||||||||    
T  49080536 tattattttttctttaatgaaaaacaaatcaatagttgattatgataatttggtaaaat 49080478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 43 - 237
Target Start/End: Complemental strand, 41920505 - 41920310
Alignment:
Q  43 tccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgt 142  Q
    ||||||||| ||||||||| ||||||||         |||||||||||| ||||||  ||||||||| |||  | ||||||| ||||||||||||||| |    
T  41920505 tccgttttaaaatgagtgttgttttagttaaaaaaaattgttttaaaataaatgtcattttcagtttccaaagcaataataactttttcttttcaattat 41920406  T
Q  143 acccttcaattaatactatatacgg-tacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||| ||| | |   |||||| ||||||||||||||||||||| ||||||||||| ||||||||||||  |||||||||||||||    
T  41920405 acccttcaattaatattatgttccactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaat 41920310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 24940877 - 24941036
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| ||||||||||||  ||||  ||| |||| | ||||||| ||||||||||||||||||||||||||||||||||||  |||  ||||| ||||     
T  24940877 ttgtttcaaaatgaatgtcattttcgatttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactactttaaaaa 24940976  T
Q  179 tatta-ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||| |||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  24940977 tattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 24941036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 49089462 - 49089619
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    |||||| |||||||||||| |||| |||||||||| | ||||||| ||||| ||| ||||| ||||||||||||| |||||| | ||  |||||| ||||    
T  49089462 ttgtttcaaaatgaatgtcacttttagttttcaatgcaataataacttttt-tttccaattatacccttcaattagtactatgttacactacttccaaag 49089560  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||||| |||||||||||| |||||||| |||||||    
T  49089561 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttagtaaaat 49089619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 81 - 263
Target Start/End: Original strand, 56460082 - 56460267
Alignment:
Q  81 tgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaat--taatactatatacggtacttcaaaag 178  Q
    |||||||||||||||||| ||||||| ||||||| | ||| ||| |||||||||| |||| || ||||||||  ||||| |||||||  |||||| |||     
T  56460082 tgttttaaaatgaatgtcactttcagctttcaatgcaatagtaactttttctttttaattatatccttcaattataatattatatacactacttccaaaa 56460181  T
Q  179 tattattttttc-tttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatg 263  Q
    |||||||||||| ||||| |||||||||||| |||| ||||||  ||||||| ||||||||| || ||| ||||||||||||||||    
T  56460182 tattattttttcttttaatgaaaaacaaacttatagctgattagaataatttagtaaaataatatatctctttcttttaattaatg 56460267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 42605615 - 42605728
Alignment:
Q  125 ttttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaaga 223  Q
    ||||||||||||||||||||||||||||||||| ||| | ||  |||||  ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  42605615 ttttttcttttcaattgtacccttcaattaatattatgttacattactttcaaagtattattttttctttaatgaaaaacaaaccaatagttgattaaga 42605714  T
Q  224 taatttggtaaaat 237  Q
    ||||||||||||||    
T  42605715 taatttggtaaaat 42605728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 2728550 - 2728399
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat---atacggtacttcaaaagtatta 183  Q
    ||||||||||||  ||||||||| |||| | ||||||| |||||||||||||  |||||||||| ||||||||||   ||||  |||||| |||||||||    
T  2728550 aaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaacagtacccttcagttaatactatgttatac--tacttccaaagtatta 2728453  T
Q  184 ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||||| |||||||| || |||||||||||| ||||||||||||||||    
T  2728452 ttttttctttaatgaaaaacacaccaatagttgattaggataatttggtaaaat 2728399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 118 - 237
Target Start/End: Original strand, 18430025 - 18430145
Alignment:
Q  118 ataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttg 216  Q
    ||||||| |||||||||||||||||||||||||||||||||||| | ||  |||||   |||||||||||||||||||| ||||||||||| ||||||||    
T  18430025 ataataactttttcttttcaattgtacccttcaattaatactatgttacactactttctaagtattattttttctttaaagaaaaacaaacgaatagttg 18430124  T
Q  217 attaagataatttggtaaaat 237  Q
    |||| ||||||||||||||||    
T  18430125 attatgataatttggtaaaat 18430145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 101 - 205
Target Start/End: Complemental strand, 25123864 - 25123760
Alignment:
Q  101 tttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaa 200  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||   ||||| ||| ||||||||||||||||| ||||    
T  25123864 tttcagttttcaatacaataataattttttcttttcagttgtacccttcaattaatactatatacacgacttccaaaatattattttttctttaaagaaa 25123765  T
Q  201 aacaa 205  Q
    |||||    
T  25123764 aacaa 25123760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 87 - 265
Target Start/End: Original strand, 44650893 - 44651071
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattt 186  Q
    |||||||| ||| ||||||||||||||| | |||| ||    |||||||||||| |||||  |||||||||||||||||  |||||  ||| |||||| |    
T  44650893 aaaatgaacgtcactttcagttttcaatgcaataaaaaaaaattcttttcaattatacccaacaattaatactatatacactactttcaaaatattatat 44650992  T
Q  187 tttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    | ||||||| |||||| ||||||||||  ||||| ||||||||||||||||||||| | | ||||||||||||||||||    
T  44650993 tgtctttaatgaaaaataaactaatagccgattatgataatttggtaaaataacatatatctttcttttaattaatgca 44651071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 50623081 - 50623240
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    ||||||||||||| ||||   ||| |||||||||| | ||||||| ||||||||||||||| ||||||||||||||||  || | ||  |||||| ||||    
T  50623081 ttgttttaaaatgtatgttatttttagttttcaatgcaataataactttttcttttcaattatacccttcaattaatataatgttacactacttctaaag 50623180  T
Q  179 tattatttt-ttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||| |||||||| ||||||||||| |||||||||||| ||||||||| ||||||    
T  50623181 tattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttgataaaat 50623240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 52253843 - 52254004
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttctttt---caattgtacccttcaattaatactatatacgg-tacttcaa 175  Q
    |||||| |||||||||||| |||||||||| |||| | ||||||| || |||||||   |||||||||||||||||||||| ||| | |   |||||| |    
T  52253843 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttcttctttttttcaattgtacccttcaattaatattatgttccactacttcca 52253942  T
Q  176 aagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    | |||||||||||||||||| |||||||| || |||||||||||| ||||||||||||||||    
T  52253943 aggtattattttttctttaatgaaaaacagaccaatagttgattaggataatttggtaaaat 52254004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 53814649 - 53814498
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaagtattatt 185  Q
    |||||||||||| |||| ||||  |||| | ||||||| ||||| |||| ||||||||||||||||||||||||| | ||  |||||  |||||||||||    
T  53814649 aaaatgaatgtcacttttagttaacaatgcaataataactttttatttttaattgtacccttcaattaatactatgttacactactttcaaagtattatt 53814550  T
Q  186 ttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||| ||||||||||  |||| ||||||| ||||||||||||||||    
T  53814549 ttttctttaatgaaaaacaaatcaataattgattaggataatttggtaaaat 53814498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 29519684 - 29519526
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| ||||| |||||| |||| ||||| |||| | ||||||| ||||| |||||||||||| |||||||||||||||||  |||  |||||| ||||    
T  29519684 ttgtttcaaaataaatgtcacttttagtttccaatgcaataataactttttattttcaattgtatccttcaattaatactatgttacactacttctaaag 29519585  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||| ||| ||||||| ||||   ||||||||||||||    
T  29519584 tattattttttctttaatgaaaaacgaaccaatagtttattagagtaatttggtaaaat 29519526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 27653674 - 27653830
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    |||||||||||| ||||||  ||| |||||  ||| | || |||| |||||  ||||||||||||||||||||||||||||| | ||  |||||| |||     
T  27653674 ttgttttaaaataaatgtcatttttagtttctaatgcaatgataacttttt--tttcaattgtacccttcaattaatactatgttacactacttccaaaa 27653771  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| |||||||||   |||||||||||| ||||||||||||||||    
T  27653772 tattattttttctttaatgaaaaacaactcaatagttgattaggataatttggtaaaat 27653830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 28734650 - 28734754
Alignment:
Q  134 ttcaattgtacccttcaattaatactatat-acggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggt 232  Q
    |||||||||||||||||||||||||||| | ||  |||||  ||||||||||||||||||||| ||||||||||| |||| ||||||| ||||||||| |    
T  28734650 ttcaattgtacccttcaattaatactatgttacactacttgcaaagtattattttttctttaatgaaaaacaaaccaataattgattaggataatttgat 28734749  T
Q  233 aaaat 237  Q
    |||||    
T  28734750 aaaat 28734754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 37624554 - 37624662
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| ||||| |||||| |||||||||| |||| | ||||||| |||||||||||||||||| ||| ||||||||||| |  ||  ||||||||||||    
T  37624554 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtatcctccaattaatactctgcacactacttcaaaagt 37624653  T
Q  180 attattttt 188  Q
    |||||||||    
T  37624654 attattttt 37624662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 250
Target Start/End: Complemental strand, 30780123 - 30780008
Alignment:
Q  136 caattgtacccttcaattaatactatatacggtacttcaaaagtattatttttt-ctttaaggaaaaacaaactaatagttgattaagataatttggtaa 234  Q
    ||||||||| |||||||||||| |||| |   |||||  ||||||||||||||| |||||| ||||||||||  |||||||||||| |||||||| ||||    
T  30780123 caattgtactcttcaattaatattataaagactactttcaaagtattatttttttctttaatgaaaaacaaatcaatagttgattaggataatttagtaa 30780024  T
Q  235 aataacatttcttttt 250  Q
    |||||||||| |||||    
T  30780023 aataacattttttttt 30780008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 44061096 - 44061224
Alignment:
Q  184 ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgt 283  Q
    |||||| ||||| ||||||||||| |||||||||||| |||||||| |||||||||||| | ||||||| ||||||||||||       ||||  ||| |    
T  44061096 ttttttatttaatgaaaaacaaaccaatagttgattatgataatttagtaaaataacatctatttttctcttaattaatgca-tttcttaatacgtgtat 44061194  T
Q  284 aaaaactttaaacgacattcattttgaaac 313  Q
    |||||| |||||||||||||||||| ||||    
T  44061195 aaaaaccttaaacgacattcattttaaaac 44061224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 25231173 - 25231281
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    ||||||||||||||||||| |||||| ||| |||| | ||||||| ||||||||||| ||||||||||  |||||||||| | |||  |||||| |||||    
T  25231173 ttgttttaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttctattgtaccctataattaatactttgtacactacttccaaagt 25231272  T
Q  180 attattttt 188  Q
    |||| ||||    
T  25231273 attactttt 25231281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 38991923 - 38991764
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttca---gttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaa 175  Q
    ||||||||||| |||||||  |||||   |||| |||| | ||||||| |||||||||| |||||||  |||||||||||| ||| | ||  |||||  |    
T  38991923 ttgttttaaaacgaatgtcaatttcatcggtttccaatgcaataataactttttcttttgaattgtattcttcaattaatattatgttacactactttca 38991824  T
Q  176 aagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| || ||||||||||| |||  ||||||| ||||||||||||||||    
T  38991823 aagtattattttttcttgaatgaaaaacaaaccaat--ttgattaggataatttggtaaaat 38991764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 40011033 - 40010873
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattt-tttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaa 177  Q
    ||||||||||||||||||  |||||||||| |||| | |||| || || ||| ||||||||||||||||||||||||||||||  |||  | ||| ||||    
T  40011033 ttgttttaaaatgaatgttactttcagtttccaatgcaataacaacttcttttttttcaattgtacccttcaattaatactatgttacactgctttaaaa 40010934  T
Q  178 gtatta-ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
     ||||| ||||||||||||   ||||||||  ||||||| |||| |||||||| |||||||    
T  40010933 atattatttttttctttaatataaaacaaatcaatagttaattaggataattttgtaaaat 40010873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 52915701 - 52915593
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| ||||||||||||||||||||||| |||| | ||||||| |||||||||||||||||| | | ||||||||||| |  ||  |||||| |||||    
T  52915701 ttgtttcaaaatgaatgtcgctttcagtttccaatgcaataataactttttcttttcaattgtatcatccaattaatactctgcacactacttccaaagt 52915602  T
Q  180 attattttt 188  Q
    |||| ||||    
T  52915601 attactttt 52915593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 22220518 - 22220437
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat 161  Q
    |||||| ||||| ||||||  ||||| |||||||| | ||||||| |||||||||||||||||||||| |||||||||||||    
T  22220518 ttgtttcaaaataaatgtcattttcaattttcaatgcaataataactttttcttttcaattgtaccctccaattaatactat 22220437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 39982108 - 39982173
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaat 152  Q
    |||||||||||| |||||||||| |||| | ||||||| |||||||||||||||||||||||||||    
T  39982108 aaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaat 39982173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 258
Target Start/End: Complemental strand, 7906148 - 7905987
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattt 186  Q
    |||||||||||| |||||||||| |  | | ||||||| |||||||||||||||||||||| ||||||||||| |  ||  | |||| ||||||||| ||    
T  7906148 aaaatgaatgtcactttcagtttccggtgcaataataactttttcttttcaattgtaccctccaattaatactctggacactgcttccaaagtattactt 7906049  T
Q  187 tttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaat 258  Q
    ||          ||||| ||| ||||||| || | |||||||||||||||||||| |||| |||||||||||    
T  7906048 tt----------aaaactaacaaatagttaataaggataatttggtaaaataacaattctctttcttttaat 7905987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 80 - 156
Target Start/End: Original strand, 31917954 - 31918030
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaat 156  Q
    |||||||||||||||| || ||||||| || |||| | |||||| |||||||||||||||| |||||||||||||||    
T  31917954 ttgttttaaaatgaatttcactttcagcttccaatgcaataatagttttttcttttcaattttacccttcaattaat 31918030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 51733653 - 51733545
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||| ||||||||||  ||| | |||||||||||||||||| | ||||||||| ||||||||||| |  ||  |||||| |||||    
T  51733653 ttgtttcaaaatgaatgtcactttcagtttctaatgcaataataattttttctttttacttgtaccctccaattaatactctgcacactacttccaaagt 51733554  T
Q  180 attattttt 188  Q
    |||| ||||    
T  51733553 attactttt 51733545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 4505335 - 4505402
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtaccct 147  Q
    |||||| |||||||||||| |||||||||| |||| | ||||||| ||||||||||||||||||||||    
T  4505335 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccct 4505402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 85 - 188
Target Start/End: Complemental strand, 21864537 - 21864434
Alignment:
Q  85 ttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattat 184  Q
    |||||||||||||  |||||||||| |||| | ||||||| |||||||||||||||||| ||| ||||||||||| |  ||  |||||| |||||||||     
T  21864537 ttaaaatgaatgttactttcagtttccaatgcaataataactttttcttttcaattgtatcctccaattaatactctgcacactacttccaaagtattac 21864438  T
Q  185 tttt 188  Q
    ||||    
T  21864437 tttt 21864434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 85 - 188
Target Start/End: Complemental strand, 21920398 - 21920295
Alignment:
Q  85 ttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattat 184  Q
    |||||||||||||  |||||||||| |||| | ||||||| |||||||||||||||||| ||| ||||||||||| |  ||  |||||| |||||||||     
T  21920398 ttaaaatgaatgttactttcagtttccaatgcaataataactttttcttttcaattgtatcctccaattaatactctgcacactacttccaaagtattac 21920299  T
Q  185 tttt 188  Q
    ||||    
T  21920298 tttt 21920295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 27943705 - 27943619
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattt-tttcttttcaattgtacccttcaattaatactatatac 165  Q
    |||||| |||||||||||| |||||| |||||||| | ||||||| || ||| ||||||||| |||||||||||||||| |||||||    
T  27943705 ttgtttcaaaatgaatgtcactttcaattttcaatgcaataataacttcttttttttcaattatacccttcaattaatattatatac 27943619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 236
Target Start/End: Original strand, 40837128 - 40837287
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtaccc-ttcaattaatactat-atacggtacttcaaaa 177  Q
    |||||| |||||||||||| |||||| ||| |||| | ||||||| ||||| |||||||| ||||||  ||||||||||||||  |||  |||||| |||    
T  40837128 ttgtttcaaaatgaatgtcactttcattttccaatgcaataataacttttt-ttttcaatcgtacccgatcaattaatactatgttacactacttccaaa 40837226  T
Q  178 --gtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaa 236  Q
       |||| |||||||||||| ||||||||||  |||   ||||||||||||||||||||||    
T  40837227 ttttatttttttttctttaatgaaaaacaaatcaatgagtgattaagataatttggtaaaa 40837287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 19903257 - 19903197
Alignment:
Q  184 ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacattt 244  Q
    |||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||||||    
T  19903257 ttttttctttaatgaaaaacaaaccaatagtttattcagataattttgtaaaataacattt 19903197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 188
Target Start/End: Complemental strand, 38510379 - 38510296
Alignment:
Q  105 agttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattttt 188  Q
    |||||||||| | ||||||| |||||||||||||||||||| | ||||||||||| || ||  |||||| ||||||||| ||||    
T  38510379 agttttcaatgcaataataactttttcttttcaattgtaccatccaattaatactctacacactacttccaaagtattactttt 38510296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 33034182 - 33034228
Alignment:
Q  217 attaagataatttggtaaaataacatttctttttcttttaattaatg 263  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  33034182 attaagataatttggtaaaatgacatatctttttcttttaattaatg 33034228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 24157183 - 24157268
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatac 165  Q
    |||||| ||||| ||||||  ||| |||||  ||| | |||||||||||||||||| ||||||| |||| ||||||||||||||||    
T  24157183 ttgtttcaaaataaatgtcaattttagtttctaatgcaataataattttttctttttaattgtatcctttaattaatactatatac 24157268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 145
Target Start/End: Original strand, 44061006 - 44061071
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacc 145  Q
    |||||||| |||||||||| |||||| |||  ||||| ||||||| ||||||||||||||||||||    
T  44061006 ttgttttataatgaatgtcactttcattttctaatacaataataactttttcttttcaattgtacc 44061071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 18053079 - 18053023
Alignment:
Q  132 ttttcaattgtacccttcaattaatactatatacggtactt-caaaagtattatttt 187  Q
    |||||||||||||||||||||||||||||||||   ||||| |||||||||||||||    
T  18053079 ttttcaattgtacccttcaattaatactatatatactacttccaaaagtattatttt 18053023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 24157312 - 24157356
Alignment:
Q  273 aatatatgtgtaaaaactttaaacgacattcattttgaaacagag 317  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||    
T  24157312 aatatgtgtgtaaaaactttaaacgacattcattttaaaacagag 24157356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 258
Target Start/End: Complemental strand, 36558423 - 36558280
Alignment:
Q  118 ataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattatt---ttttctttaaggaaaaacaaactaatagt 214  Q
    ||||||| ||||||||  ||||||||| || |||| |||||| | |||  |||| | |||||||||||   ||| |||||  | ||||||||| ||||||    
T  36558423 ataataactttttcttcccaattgtactctccaatgaatactgtgtacattactcccaaagtattattacttttactttagtggaaaacaaaccaatagt 36558324  T
Q  215 tgattaagataatttggtaaaataacatttctttttcttttaat 258  Q
    | || | |||||||||||||||||| | || | |||||||||||    
T  36558323 taataaggataatttggtaaaataaaaattatctttcttttaat 36558280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 39984904 - 39984973
Alignment:
Q  168 tacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||| ||||||| ||| ||||||||| ||||||||||  ||||||||||||  |||||||| ||||||    
T  39984904 tacttccaaagtataattgtttctttaatgaaaaacaaatcaatagttgattagaataatttgataaaat 39984973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 416
Target Start/End: Original strand, 22220284 - 22220319
Alignment:
Q  381 aatacttcatccgtttcaaaatgactgtcgttttag 416  Q
    |||||||||||||||||||||||| |||||||||||    
T  22220284 aatacttcatccgtttcaaaatgagtgtcgttttag 22220319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 417
Target Start/End: Original strand, 29519436 - 29519475
Alignment:
Q  378 tataatacttcatccgtttcaaaatgactgtcgttttagc 417  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  29519436 tataatacttcatccgttttaaaatgagtgtcgttttagc 29519475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 38510271 - 38510236
Alignment:
Q  223 ataatttggtaaaataacatttctttttcttttaat 258  Q
    |||||||||||||||||| |||||||||||||||||    
T  38510271 ataatttggtaaaataacctttctttttcttttaat 38510236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 417
Target Start/End: Complemental strand, 54711070 - 54711036
Alignment:
Q  383 tacttcatccgtttcaaaatgactgtcgttttagc 417  Q
    |||| ||||||||||||||||||||||||||||||    
T  54711070 tactccatccgtttcaaaatgactgtcgttttagc 54711036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 50621278 - 50621234
Alignment:
Q  119 taataattttttcttttcaattgtacccttcaattaatactatat 163  Q
    |||||| ||||||||||||||| || | |||||||||||||||||    
T  50621278 taataactttttcttttcaattatatcattcaattaatactatat 50621234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 55338612 - 55338564
Alignment:
Q  210 atagttgattaagataatttggtaaaataacatttctttttcttttaat 258  Q
    |||||| || ||||||||||| ||||||||||||| | |||||||||||    
T  55338612 atagttaataaagataatttgataaaataacatttatgtttcttttaat 55338564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 9e-71; HSPs: 83)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 80 - 313
Target Start/End: Original strand, 29567894 - 29568126
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||| |||||||||| |||| | ||||||| ||||||||||||||||||||||||||||||||||||||||  |||||| |||||    
T  29567894 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatatacactacttccaaagt 29567993  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatat 279  Q
    |||||||||||||||| ||||||||||| ||||||||||||  |||||||||||||||||||| | | ||||||||||||||||||       ||||| |    
T  29567994 attattttttctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaataacatatttctttcttttaattaatgca-tttcttaatatgt 29568092  T
Q  280 gtgtaaaaactttaaacgacattcattttgaaac 313  Q
    |||||||||| |||||||||||||||||||||||    
T  29568093 gtgtaaaaaccttaaacgacattcattttgaaac 29568126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 101 - 317
Target Start/End: Complemental strand, 25561004 - 25560789
Alignment:
Q  101 tttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaa 200  Q
    ||||||||| |||| | ||||||||||||||||||||||| |||| |||||||||||||||||||  |||||| ||| ||||||||||||||||| ||||    
T  25561004 tttcagtttccaatgcaataataattttttcttttcaattatacctttcaattaatactatatacactacttccaaaatattattttttctttaatgaaa 25560905  T
Q  201 aacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacgaca 300  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||| |       |||||||||||||||||| |||||||||    
T  25560904 aacaaactaatagttgattatgataatttggtaaaataacatctctctttcttttaattaatgta-tttcttaatatatgtgtaaaaactctaaacgaca 25560806  T
Q  301 ttcattttgaaacagag 317  Q
    |||||||||||| ||||    
T  25560805 ttcattttgaaatagag 25560789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 81 - 313
Target Start/End: Complemental strand, 26595221 - 26594990
Alignment:
Q  81 tgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagta 180  Q
    |||||||||||||||||| |||||||||| |||| | ||||||| |||||||||||||||||||| |||||||||||||||||||  || ||| |||| |    
T  26595221 tgttttaaaatgaatgtcactttcagtttacaatgcaataataaatttttcttttcaattgtaccattcaattaatactatatacactatttccaaagaa 26595122  T
Q  181 ttattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatg 280  Q
    ||| ||||||||||| ||||||||||| |||| ||||||| ||||||||||||||||||||| ||| |||||||||||||||| |       ||||| ||    
T  26595121 ttaatttttctttaatgaaaaacaaaccaataattgattaggataatttggtaaaataacatctctctttcttttaattaatgta-tttcttaatatgtg 26595023  T
Q  281 tgtaaaaactttaaacgacattcattttgaaac 313  Q
    ||||||||| |||||||||||||||||||||||    
T  26595022 tgtaaaaaccttaaacgacattcattttgaaac 26594990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 118 - 263
Target Start/End: Complemental strand, 31699404 - 31699259
Alignment:
Q  118 ataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttga 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||  |||||| ||| ||||||||||||||||| ||||||||||| |||||||||    
T  31699404 ataataattttttcttttcaattgtacccttcaattaatactataaacattacttccaaaatattattttttctttaatgaaaaacaaaccaatagttga 31699305  T
Q  218 ttaagataatttggtaaaataacatttctttttcttttaattaatg 263  Q
    ||| ||||||||||||||||||||| ||| ||||||||||||||||    
T  31699304 ttatgataatttggtaaaataacatctctctttcttttaattaatg 31699259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 87 - 237
Target Start/End: Original strand, 10842785 - 10842936
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaagtattatt 185  Q
    |||||||||||| ||||||||||||||| | |||||||  |||||||||||||||||| |||||||||||||||| | || ||||||| |||||||||||    
T  10842785 aaaatgaatgtcactttcagttttcaatgcaataataacattttcttttcaattgtactcttcaattaatactatgttacagtacttccaaagtattatt 10842884  T
Q  186 ttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10842885 ttttctttaatgaaaaacaaactaatagttgattaagataatttggtaaaat 10842936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 88 - 261
Target Start/End: Original strand, 27208995 - 27209168
Alignment:
Q  88 aaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattatttt 187  Q
    ||||||||||| ||||| |||| |||| | ||||||| ||||| |||||||||||||| ||||||||||| |||||||  |||||| |||||||||||||    
T  27208995 aaatgaatgtcactttcggtttccaatgcaataataactttttattttcaattgtaccattcaattaatattatatacactacttccaaagtattatttt 27209094  T
Q  188 ttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaa 261  Q
    |||||||| ||||||||||  |||||||||||| ||||||||||||||||||||| ||| ||||||||||||||    
T  27209095 ttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacatatctctttcttttaattaa 27209168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 80 - 263
Target Start/End: Complemental strand, 16757347 - 16757168
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||| ||||| |||||||||| |||| | ||||||| || |||||||||||||||||||||||||||||||||||||   ||||  |||||    
T  16757347 ttgtttcaaaatgtatgtcactttcagtttccaatgcaataataacttattcttttcaattgtacccttcaattaatactatatacacaactttcaaagt 16757248  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatg 263  Q
    ||||||||| |||    |||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  16757247 attatttttcctt----gaaaaacaaactaatagttgattaggatagtttggtaaaataacatttctctttcttttaattaatg 16757168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 43 - 237
Target Start/End: Original strand, 15822995 - 15823190
Alignment:
Q  43 tccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgt 142  Q
    ||||||||| |||||| |||||||||||         ||||||||||||||||||| |||||||||| |||| | ||||||| |||||||||||||||||    
T  15822995 tccgttttaaaatgagagtcgttttagtcaaaagaatttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgt 15823094  T
Q  143 acccttcaattaatactat-atacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||||||||||||  |||  |||||  ||||||||||||||||||||| ||||||||||| | |||||||||| ||||||||||||||||    
T  15823095 acccttcaattaatactatgttacactactttcaaagtattattttttctttaatgaaaaacaaaccattagttgattaggataatttggtaaaat 15823190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 80 - 313
Target Start/End: Complemental strand, 18794694 - 18794463
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||||||||| ||||||  |||||||||  ||| | ||||||| |||||||||||| ||| ||||||||||||||| |||||||  |||||| ||| |    
T  18794694 ttgttttaaaataaatgtca-tttcagtttcgaatgcaataataactttttcttttcagttgcacccttcaattaatattatatacactacttccaaaat 18794596  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatat 279  Q
    ||| |||||||||||| | ||||||||||||||||||||||  |||||||||||||||||||| | | ||||||||||||||||||       ||||| |    
T  18794595 attcttttttctttaatggaaaacaaactaatagttgattagaataatttggtaaaataacatatttctttcttttaattaatgca-tttattaatatgt 18794497  T
Q  280 gtgtaaaaactttaaacgacattcattttgaaac 313  Q
    |||||||||  |||||||||||||||||| ||||    
T  18794496 gtgtaaaaatattaaacgacattcattttaaaac 18794463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 40 - 237
Target Start/End: Complemental strand, 48025447 - 48025249
Alignment:
Q  40 ccctccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaat 139  Q
    |||||||||||| |||||||||||||||||          |||||| |||||||||||| ||||| |||| |||| | ||||||| |||||| |||||||    
T  48025447 ccctccgttttaaaatgagtgtcgttttagcaaaaaaaaattgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcgtttcaat 48025348  T
Q  140 tgtacccttcaattaatactatat-acggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||||||||||||||| | ||  |||||| ||||||||||||||||||||| ||||||||||| ||||||| |||| ||||||||||||||||    
T  48025347 tgtacccttcaattaatactatgttacactacttccaaagtattattttttctttaaagaaaaacaaacaaatagtttattaggataatttggtaaaat 48025249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 49468864 - 49468706
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactata-tacggtacttcaaaag 178  Q
    |||||| |||||||||||  |||||||||| |||| | |||||||  |||||||||||||||||||||||||||||||||||| |||  |||||| ||||    
T  49468864 ttgtttcaaaatgaatgtaactttcagtttccaatgcaataataacattttcttttcaattgtacccttcaattaatactatattacactacttccaaag 49468765  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
     |||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  49468764 gattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 49468706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 44108597 - 44108757
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||||||||| |||||| |||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||  |||  |||||| ||||    
T  44108597 ttgttttaaaataaatgtcactttcagtttccaatacaataataactttttcttttcaattgtacccttcaattaatactatgttacaatacttccaaag 44108696  T
Q  179 tatta--ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||  |||||||||||| ||||||||||| |||||||| ||| ||||||||||||||||    
T  44108697 tattattttttttctttaatgaaaaacaaaccaatagttgtttaggataatttggtaaaat 44108757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 80 - 262
Target Start/End: Complemental strand, 7191360 - 7191177
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||||||||| |||||| |||||  ||||| ||   ||||||| ||||||||||||||| |||| |||||||||||||||||||  |||||  ||| |    
T  7191360 ttgttttaaaataaatgtcactttcgattttctatgtaataataactttttcttttcaattatacctttcaattaatactatatacactacttttaaaat 7191261  T
Q  180 attatttttt-ctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaat 262  Q
    |||||||||| |||||| |||||| |||| |||||||||||| ||||||||||||||||||||| ||| |||||||||||||||    
T  7191260 attatttttttctttaacgaaaaataaacaaatagttgattaggataatttggtaaaataacatctctctttcttttaattaat 7191177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 40 - 237
Target Start/End: Complemental strand, 32807131 - 32806933
Alignment:
Q  40 ccctccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaat 139  Q
    |||||||||| | |||||||||||||||||          |||||| |||||||||||| |||||||||| |||| | ||||||| ||||||||||||||    
T  32807131 ccctccgtttcaaaatgagtgtcgttttagcctaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaat 32807032  T
Q  140 tgtacccttcaattaatactat-atacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||||| |||||||||  |||  |||||  ||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| ||||||||    
T  32807031 tgtacccttcaaataatactatgttacactactttcaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataattcggtaaaat 32806933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 9915441 - 9915593
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||||||||||||||||  ||||||||| |||| | ||||||| ||||||||||||||||||||||||||||||||||||  |||  |||||  ||||    
T  9915441 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataaatttttcttttcaattgtacccttcaattaatactatgttacactacttgcaaag 9915540  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttgg 231  Q
    ||||||||||||||||| ||||||||||  |||||||||||| ||||||||||    
T  9915541 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttgg 9915593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 81 - 262
Target Start/End: Complemental strand, 49900910 - 49900727
Alignment:
Q  81 tgttttaaaatgaatgtcgctttcagttttcaa-tacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    ||||||||||| |||||| |||||||||||||| ||| ||||||| ||||| |||||||||||||| ||||||||||| |||||||  |||||  |||||    
T  49900910 tgttttaaaataaatgtcactttcagttttcaaatacaataataactttttattttcaattgtacctttcaattaataatatatacactactttcaaagt 49900811  T
Q  180 attatt-ttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaat 262  Q
    |||||| |||||||||| |||||| |||| |||||||||||| |||||||| ||||||||| || | | |||||| ||||||||    
T  49900810 attatttttttctttaaagaaaaataaaccaatagttgattaggataatttagtaaaataatatatttctttcttctaattaat 49900727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 85 - 236
Target Start/End: Complemental strand, 46286966 - 46286814
Alignment:
Q  85 ttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaagtatta 183  Q
    |||||| ||||||| |||||| |||||||| | ||||||| |||||||||||||||| ||||||||||||||||||||| ||  || ||  ||||||| |    
T  46286966 ttaaaaagaatgtcactttcatttttcaatgcaataataactttttcttttcaattgcacccttcaattaatactatattacactatttttaaagtatca 46286867  T
Q  184 ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaa 236  Q
    |||||||||||| ||||||||||| |||||||||||| |||||||||||||||    
T  46286866 ttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaa 46286814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 100 - 308
Target Start/End: Complemental strand, 2610963 - 2610762
Alignment:
Q  100 ctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaa 199  Q
    ||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||| | |||||  |||||| ||||||||||||||  ||||| |||    
T  2610963 ctttcagttttcaatacaataataattttttcttttcaattgtaacattcaattaatattctatacactacttccaaagtattattttt--tttaatgaa 2610866  T
Q  200 aaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacgac 299  Q
    ||| |||| || | ||||||| ||||| ||||||||||||||||| ||    |||||||||||| |       ||||| ||| |||||||||||||||||    
T  2610865 aaataaaccaacaattgattaggataacttggtaaaataacatttatt----ttttaattaatg-aatttcttaatatgtgtataaaaactttaaacgac 2610771  T
Q  300 attcatttt 308  Q
    |||||||||    
T  2610770 attcatttt 2610762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 126 - 265
Target Start/End: Complemental strand, 8895122 - 8894983
Alignment:
Q  126 tttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagata 225  Q
    |||||||||| ||||||||||||||||||||| |||||||  || ||  ||| ||||||||||| ||||| ||||||||||  |||||||||||| ||||    
T  8895122 tttttctttttaattgtacccttcaattaatattatatacactattttcaaaatattattttttttttaatgaaaaacaaatcaatagttgattaggata 8895023  T
Q  226 atttggtaaaataacatttctttttcttttaattaatgca 265  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  8895022 atttggtaaaataacatctctctttcttttaattaatgca 8894983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 87 - 308
Target Start/End: Complemental strand, 8989781 - 8989565
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtac-ttcaaaagtattatt 185  Q
    ||||| ||||||  |||||||||||||||  ||||||||||||| |    |||| || ||||||||||||||| |||||  ||| ||||||| |||||||    
T  8989781 aaaataaatgtcattttcagttttcaatagaataataatttttttt----aattatatccttcaattaatactctatacactacattcaaaa-tattatt 8989687  T
Q  186 ttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaa 285  Q
    |||||||||| ||||||||||| ||||||||||||  |||||||||||||||||||| | | ||||||||||||||||||       ||||| |||||||    
T  8989686 ttttctttaatgaaaaacaaaccaatagttgattataataatttggtaaaataacatctttctttcttttaattaatgca-tttcttaatatgtgtgtaa 8989588  T
Q  286 aaactttaaacgacattcatttt 308  Q
    ||||||||| ||||||| |||||    
T  8989587 aaactttaatcgacatttatttt 8989565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 31798587 - 31798746
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    |||||| |||||||| ||| |||||||||| | |||| ||||||| ||||||||||||||| |||| || |||||||||||| | ||  |||||| ||||    
T  31798587 ttgtttcaaaatgaacgtcactttcagtttccgatacaataataactttttcttttcaattataccttttaattaatactatgttacactacttccaaag 31798686  T
Q  179 tattatttt-ttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  31798687 tattatttttttctttaatgaaaaacaaaccaatagttgattaagataatttggtaaaat 31798746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 5463573 - 5463731
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||||||| |||| | || |||| ||||||||||||||||||| ||| ||||||||||||  |||  |||||| |||     
T  5463573 ttgtttcaaaatgaatgtcactttcagtttccaatgcaattataactttttcttttcaattgtacactttaattaatactatgttacactacttccaaaa 5463672  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||| ||||||||||||    
T  5463673 tattattttttctttaatgaaaaacaaaccaatagttgattaggattatttggtaaaat 5463731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 31491923 - 31491765
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||| ||||||||   ||||||| |||||||||||||||||| |||||||||||||||||  |||  |||||  ||||    
T  31491923 ttgtttcaaaatgaatgtcactttcaattttcaatgtcataataactttttcttttcaattgtatccttcaattaatactatgttacactactttcaaag 31491824  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||| ||||||||||||| ||||||||||  |||||||||||| ||||||||||||||||    
T  31491823 tataattttttctttaatgaaaaacaaatcaatagttgattatgataatttggtaaaat 31491765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 48009008 - 48009166
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    ||||||||||||||||| |  ||| |||||| ||| | ||||||| |||||||||||||||||||| ||||||||||||||| | ||  | |||| ||||    
T  48009008 ttgttttaaaatgaatggcatttttagtttttaatgcaataataactttttcttttcaattgtaccgttcaattaatactatgttacactgcttccaaag 48009107  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||  ||||||||||| |||||||||||| ||||||||||||||||    
T  48009108 tattattttttctttattgaaaaacaaaccaatagttgattaggataatttggtaaaat 48009166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 35848086 - 35847931
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| ||| |||||||| |||||||||| |||| | ||||||| |||||||||||||||||||| |||||||||||||||  |||  |||||  ||||    
T  35848086 ttgtttgaaagtgaatgtcactttcagtttacaatgcaataataactttttcttttcaattgtacctttcaattaatactatgttacactactttcaaag 35847987  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||||||||   ||||||||||  |||||||||||||||||||||||||||||    
T  35847986 tattattttttcttt---gaaaaacaaatcaatagttgattaagataatttggtaaaat 35847931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 87 - 237
Target Start/End: Original strand, 50094234 - 50094386
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaagtatt-at 184  Q
    |||||||||||| |||||||||| |||| | ||||||| ||||||||||||||||||||||||||||||||||||  |||  |||||  ||||||||  |    
T  50094234 aaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttacaaagtattgtt 50094333  T
Q  185 tttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||| ||||| ||||| |||||||||||| ||||||||||||||||    
T  50094334 tttttctttaatgaaaagcaaaccaatagttgattaggataatttggtaaaat 50094386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 46045971 - 46046129
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||||||||| || | ||||||| ||||| ||||||||| |||||||| |||||||||||  |||  |||||  ||||    
T  46045971 ttgtttcaaaatgaatgtcactttcagttttcgatgcaataataactttttattttcaattatacccttcgattaatactatgttacactactttcaaag 46046070  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||| |||||||| ||||| |||| ||||||||||||| ||||||||||||||||    
T  46046071 tattatttattctttaatgaaaatcaaattaatagttgattaggataatttggtaaaat 46046129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 1740794 - 1740635
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatacta-tatacggtacttcaaaag 178  Q
    ||||||||||||||||||| |||||||||| ||||   ||||||| ||||| |||||||||||||| ||||||||||||||   |||  |||||| |||     
T  1740794 ttgttttaaaatgaatgtcactttcagtttccaatgaaataataactttttattttcaattgtaccattcaattaatactacgttacactacttccaaaa 1740695  T
Q  179 tatta-ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
     |||| ||||||||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  1740694 cattatttttttctttaataaaaaacaaactaatagttgattatgataatttggtaaaat 1740635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 80 - 195
Target Start/End: Original strand, 46554796 - 46554911
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    ||||||||||||||||||| | |||||||| || | | ||||||| ||||| ||||||||||||||||||||||||||||||||||  |||||| |||||    
T  46554796 ttgttttaaaatgaatgtcaccttcagtttccactgcaataataactttttattttcaattgtacccttcaattaatactatatacactacttccaaagt 46554895  T
Q  180 attattttttctttaa 195  Q
    ||||||||||||||||    
T  46554896 attattttttctttaa 46554911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 88 - 237
Target Start/End: Complemental strand, 52125281 - 52125131
Alignment:
Q  88 aaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaagtattattt 186  Q
    |||||||||||  ||||||||| |||| | ||||||||||||| || ||||||||||||||||||||||| ||| | ||  |||||| | ||||||||||    
T  52125281 aaatgaatgtcaatttcagtttccaatgcaataataattttttattctcaattgtacccttcaattaatattatgttacactacttccatagtattattt 52125182  T
Q  187 tttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||| ||||| ||||||||||| ||||||||||||  |||||||||||||||    
T  52125181 tttgtttaatgaaaaacaaaccaatagttgattagaataatttggtaaaat 52125131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 24611666 - 24611514
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaagtatta-t 184  Q
    |||||||||||| |||| |||||  |||   ||||||| ||||||||||||||||||||||||||||||||||||  |||  |||||| ||||||||| |    
T  24611666 aaaatgaatgtcacttttagtttctaatgtaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaagtattatt 24611567  T
Q  185 tttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||| ||||||||||| |||||||||||| | |||||| |||||||    
T  24611566 tttttctttaatgaaaaacaaaccaatagttgattagggtaatttagtaaaat 24611514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 81 - 308
Target Start/End: Complemental strand, 51244988 - 51244761
Alignment:
Q  81 tgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagta 180  Q
    ||||||||||| || ||| |||||| ||| |||||| ||||||| |||||||||||||||||||  |||| ||||||||||||||  |||||| ||||||    
T  51244988 tgttttaaaataaaagtcactttcacttt-caatacaataataactttttcttttcaattgtacatttcagttaatactatatacattacttccaaagta 51244890  T
Q  181 ttattt--tttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatata 278  Q
     |||||  ||||||| | |||||| |||  |||  |||| || |||||||| |||||||||||| ||| |||||||||||||||  |       ||||||    
T  51244889 atattttatttctttgatgaaaaataaatcaatgattgactaggataatttagtaaaataacatatctctttcttttaattaattta-ttttttaatata 51244791  T
Q  279 tgtgtaaaaactttaaacgacattcatttt 308  Q
    |||||||||||||||||| ||||| |||||    
T  51244790 tgtgtaaaaactttaaacaacatttatttt 51244761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 83 - 260
Target Start/End: Complemental strand, 33622515 - 33622331
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatt 182  Q
    ||||||||||||||||  ||||  |||||||| | ||||||| ||| ||||||||||||||| ||| | |||||| ||| |||  |||||| ||||||||    
T  33622515 ttttaaaatgaatgtcattttcgattttcaatgcaataataactttatcttttcaattgtactctttagttaatattatgtacactacttctaaagtatt 33622416  T
Q  183 a-ttttttctttaaggaaaaacaaactaa------tagttgattaagataatttggtaaaataacatttctttttcttttaatta 260  Q
    |  ||||||||||| |||||| |||||||      |||||||||||||||||||| ||||||||||| ||| |||||||||||||    
T  33622415 acatttttctttaatgaaaaataaactaatactactagttgattaagataatttgataaaataacatatctctttcttttaatta 33622331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 90 - 230
Target Start/End: Original strand, 34110535 - 34110676
Alignment:
Q  90 atgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaagtattattttt 188  Q
    ||||||||  |||||||||| |||| | ||||||| |||||||||| |||||||||||||||||| || ||| | ||  |||||  ||||||||||||||    
T  34110535 atgaatgttactttcagtttccaatgcaataataactttttctttttaattgtacccttcaattattattatcttactctactttcaaagtattattttt 34110634  T
Q  189 tctttaaggaaaaacaaactaatagttgattaagataatttg 230  Q
    ||||||| ||||||||||| |||||||||||| |||||||||    
T  34110635 tctttaatgaaaaacaaaccaatagttgattaggataatttg 34110676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 15573605 - 15573769
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataa----ttttttcttttcaattgtacccttcaattaatactat-atacggtacttca 174  Q
    |||||| |||||||||||| ||||||||||||||| | |||||||    ||||||||||||||||||||||||||||||||| |||  ||   ||||||     
T  15573605 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttttttcttttcaattgtacccttcaattaatattatgttagactacttcc 15573704  T
Q  175 aaagtatta--ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||| |||||  |||||||||||| ||||||||||| ||||| | |||| ||||||||||||||||    
T  15573705 aaaatattattttttttctttaatgaaaaacaaaccaatagataattaggataatttggtaaaat 15573769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 100 - 237
Target Start/End: Original strand, 43759350 - 43759488
Alignment:
Q  100 ctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaagtattattttttctttaagga 198  Q
    |||||||||||| || | |||||||||||||||||||||||||||||||||||||||| |||  |||  |||||| ||| | ||||||||||||||| ||    
T  43759350 ctttcagttttcgatgcaataataattttttcttttcaattgtacccttcaattaataatatgttacactacttccaaaatgttattttttctttaatga 43759449  T
Q  199 aaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||| ||  ||||||| |||| ||||||||| ||||||    
T  43759450 aaaaccaatcaatagttaattaggataatttgataaaat 43759488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 80 - 200
Target Start/End: Original strand, 26755218 - 26755338
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||||||| ||||||  |||||| ||||||||||||||| |||||||||||||||||||| | ||  |||||| ||||    
T  26755218 ttgtttcaaaatgaatgtcactttcagtttccaatacattaataactttttcttttcaatt-tacccttcaattaatactatgtcacactacttccaaag 26755316  T
Q  179 tattattttttctttaaggaaa 200  Q
    ||||||||||||||||| ||||    
T  26755317 tattattttttctttaatgaaa 26755338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 137 - 265
Target Start/End: Original strand, 5034 - 5162
Alignment:
Q  137 aattgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaa 236  Q
    ||||||| | ||||||||||| |||||||  |||||  |||||||||||||||| | |  ||||||||||| |||||||||||| |||||||||||||||    
T  5034 aattgtatcattcaattaatattatatacactactttcaaagtattattttttcatcagcgaaaaacaaaccaatagttgattaggataatttggtaaaa 5133  T
Q  237 taacatttctttttcttttaattaatgca 265  Q
    |||||| | | ||||||| ||||||||||    
T  5134 taacatctatctttctttaaattaatgca 5162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 190 - 308
Target Start/End: Complemental strand, 44557112 - 44556995
Alignment:
Q  190 ctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaaaaac 289  Q
    |||||| ||||||||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||||||||       ||||| ||| |||||||    
T  44557112 ctttaatgaaaaacaaaccaacagtttattaagataatttggtaaaataacatttctctttcttttaattaatgca-ttttttaatatgtgtataaaaac 44557014  T
Q  290 tttaaacgacattcatttt 308  Q
     ||||||||||||||||||    
T  44557013 cttaaacgacattcatttt 44556995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 80 - 258
Target Start/End: Complemental strand, 34032233 - 34032065
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||| |||||||||| |||| | |||||||||||||||||||||||||||| | ||||||||||| |  ||| |||||| |||||    
T  34032233 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtaccgtccaattaatactttgcacgctacttccaaagt 34032134  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaat 258  Q
    |||| ||||          ||||| ||| ||||||| || | |||||||||||||||||||  |||| |||||||||||    
T  34032133 attactttt----------aaaactaaccaatagttaataaggataatttggtaaaataaccattctctttcttttaat 34032065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 83 - 189
Target Start/End: Original strand, 25487089 - 25487195
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatt 182  Q
    |||||||||||||||| ||||||||||||||| | ||||||| |||||||||||||||||||||| ||||||||||| |  ||  |||||| ||||||||    
T  25487089 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtaccctccaattaatactctgcacactacttccaaagtatt 25487188  T
Q  183 atttttt 189  Q
    | |||||    
T  25487189 aattttt 25487195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 40717442 - 40717368
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat 161  Q
    |||||||||||| ||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  40717442 aaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaactgtacccttcaattaatactat 40717368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 169 - 308
Target Start/End: Complemental strand, 46271087 - 46270949
Alignment:
Q  169 acttcaaaagtattattttttctttaaggaaaaacaaactaata-gttgattaagataatttggtaaaataacatttctttttcttttaattaatgcann 267  Q
    ||||| ||||||||||||||||||||| |||||||||||||||| |||||||| |||||| ||||||||||| |||| ||||| || |||||||||||      
T  46271087 acttccaaagtattattttttctttaatgaaaaacaaactaatacgttgattacgataatctggtaaaataatattt-ttttttttgtaattaatgca-t 46270990  T
Q  268 nnnnnaatatatgtgtaaaaactttaaacgacattcatttt 308  Q
         ||||| | ||||||||| ||||||||||||||||||    
T  46270989 ttattaatatttatgtaaaaacgttaaacgacattcatttt 46270949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 150 - 262
Target Start/End: Original strand, 28538272 - 28538385
Alignment:
Q  150 aattaatactatatacggtacttcaaaagtattatttt-ttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttcttt 248  Q
    ||||||||||||||||  || ||  || |||||||||| |||||||| |||||| |||| |||||||||||| ||||||||||||||||||||| ||| |    
T  28538272 aattaatactatatacactattttcaatgtattatttttttctttaatgaaaaataaaccaatagttgattatgataatttggtaaaataacatctctct 28538371  T
Q  249 ttcttttaattaat 262  Q
    ||||||||||||||    
T  28538372 ttcttttaattaat 28538385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 101 - 237
Target Start/End: Complemental strand, 52066420 - 52066285
Alignment:
Q  101 tttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaagtattattttttctttaaggaa 199  Q
    ||||| |||||||| |  ||||||||||| ||||||||||||||||||||||||||| ||||| ||  |||||  |||| ||| |||||| ||||| |||    
T  52066420 tttcaattttcaatgcagtaataattttt-cttttcaattgtacccttcaattaatattatattacactactttcaaag-atttttttttgtttaatgaa 52066323  T
Q  200 aaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||  |||||||||||||||||||||||||||||    
T  52066322 aaacaaatcaatagttgattaagataatttggtaaaat 52066285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 80 - 190
Target Start/End: Complemental strand, 39477860 - 39477751
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    ||||||||||||| ||||| |||| | ||| |||| | ||||||||||||| ||||||||||||| ||||||||||||||||||||  ||||||  ||||    
T  39477860 ttgttttaaaatggatgtcacttttaatttccaatgcaataataatttttt-ttttcaattgtacacttcaattaatactatatacactacttcctaagt 39477762  T
Q  180 attattttttc 190  Q
    |||||||||||    
T  39477761 attattttttc 39477751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 103 - 237
Target Start/End: Complemental strand, 49426545 - 49426414
Alignment:
Q  103 tcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaagtattattttttctttaaggaaaa 201  Q
    |||||||||||| | ||||||||||||||||||||| ||||||| ||||||||||||||  |||  |||||| ||| ||    ||||| ||||| ||| |    
T  49426545 tcagttttcaatgcaataataattttttcttttcaactgtacccgtcaattaatactatgttacactacttccaaaata----tttttttttaatgaaga 49426450  T
Q  202 acaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||| |||||||||||| ||||||||||||||||    
T  49426449 acaaaccaatagttgattaggataatttggtaaaat 49426414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 88 - 237
Target Start/End: Original strand, 25151821 - 25151966
Alignment:
Q  88 aaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattatttt 187  Q
    ||||||||||| ||||| |||| |||| | |||||||  ||||||||||||||||||||||||||||    | | |||  |||||| |||||||||||||    
T  25151821 aaatgaatgtcactttcggtttccaatgcaataataacattttcttttcaattgtacccttcaatta----tgt-tacactacttccaaagtattatttt 25151915  T
Q  188 ttctttaa-ggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||| | ||||| |||| ||||||||||||  |||||||||||||||    
T  25151916 ttctttaatgaaaaaaaaaaccaatagttgattagtataatttggtaaaat 25151966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 27720963 - 27721035
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatact 159  Q
    |||||||||||| ||||||||||||||||  ||||||| |||||||||||||||||||||| |||||||||||    
T  27720963 aaaatgaatgtcactttcagttttcaatataataataactttttcttttcaattgtaccctccaattaatact 27721035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 44258660 - 44258588
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaat 152  Q
    ||||||||||||||||||| |||||||||| |||| | |||||||||||||||||||||||||||||| ||||    
T  44258660 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtaccctccaat 44258588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 50249308 - 50249416
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||| |||||||||| |||| | ||||||| |||||||||||||||||||||| ||||||||||| |  ||  |||||| |||||    
T  50249308 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactttgcacactacttccaaagt 50249407  T
Q  180 attattttt 188  Q
    |||| ||||    
T  50249408 attactttt 50249416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 12591235 - 12591156
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatact 159  Q
    ||||||||||||||||||| |||| ||||| |||| | ||||||| |||||||||||||||||||||| |||||||||||    
T  12591235 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatact 12591156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 26352234 - 26352155
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatact 159  Q
    |||||| |||||||||||| |||| |||||||||| | ||||||| |||||||||||||||||||||| |||||||||||    
T  26352234 ttgtttcaaaatgaatgtcacttttagttttcaatgcaataataactttttcttttcaattgtaccctccaattaatact 26352155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 44557197 - 44557112
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatac 165  Q
    ||||||||||||||||||| |||||||| | |||| | |||||||  ||||||||||||||||||| |||||||||| ||||||||    
T  44557197 ttgttttaaaatgaatgtcactttcagtctccaatgcaataataacattttcttttcaattgtaccattcaattaatgctatatac 44557112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 105 - 262
Target Start/End: Original strand, 9092618 - 9092772
Alignment:
Q  105 agttttcaatacgataataatttttt-cttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaac 203  Q
    ||||| |||| | ||||||||||||| ||||||||  |||| |||||||||||||   ||||  ||||||||||||||| |||||||||||| |||||||    
T  9092618 agtttccaatccaataataatttttttcttttcaaacgtactcttcaattaatac---atacactacttcaaaagtatt-ttttttctttaatgaaaaac 9092713  T
Q  204 aaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaat 262  Q
    |||  |||| |||||||  |||||||   |||||||||| ||| ||| |||||||||||    
T  9092714 aaatcaatatttgattagaataattttagaaaataacatctctctttattttaattaat 9092772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 34047388 - 34047280
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||| |||| ||||| |||| | ||||||| |||||||||||||||||||||| ||||||||||| || ||  |||||| ||| |    
T  34047388 ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctacacactacttccaaaat 34047289  T
Q  180 attattttt 188  Q
    |||| ||||    
T  34047288 attactttt 34047280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 38531450 - 38531369
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat 161  Q
    |||||| ||||||||||||  ||||||||| |||| | ||||||||||||||||||||||| | |||||||||| |||||||    
T  38531450 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataattttttcttttcaattatgcccttcaattgatactat 38531369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 5225890 - 5225818
Alignment:
Q  168 tacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataac 240  Q
    |||||| ||||||||| ||||||||||| |||||| |||| ||||||| |||| |||||||||||||||||||    
T  5225890 tacttccaaagtattactttttctttaatgaaaaataaaccaatagttaattatgataatttggtaaaataac 5225818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 13408418 - 13408350
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtaccctt 148  Q
    |||||||||||||||| |  ||||||||||||||| | ||||||| |||||||||||||||||||||||    
T  13408418 ttgttttaaaatgaattttactttcagttttcaatgcaataataactttttcttttcaattgtaccctt 13408350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 38530894 - 38530834
Alignment:
Q  177 agtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||||| ||||||||||| |||||||||||| |||||||| |||||||    
T  38530894 agtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttagtaaaat 38530834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 14593465 - 14593406
Alignment:
Q  88 aaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtaccct 147  Q
    ||||||||||| |||||||||| |||| | ||||||||||||||||||||||||||||||    
T  14593465 aaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtaccct 14593406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 52024387 - 52024308
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatact 159  Q
    |||||| ||||| |||||   |||||||||||||| | ||||||| |||||||||||||||||||||| |||||||||||    
T  52024387 ttgtttcaaaataaatgttattttcagttttcaatgcaataataaatttttcttttcaattgtaccctccaattaatact 52024308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 52706880 - 52706953
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaatta 154  Q
    |||||||||||| |||||| ||||||||||| |||   |||||||||||||||||| ||||||||||||||||||    
T  52706880 ttgttttaaaat-aatgtcactttcagtttttaatgtaataataattttttctttttaattgtacccttcaatta 52706953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 257
Target Start/End: Original strand, 11799459 - 11799636
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    ||||| |||||||||||||  ||  |||||||||||| ||| ||| |||||||||| |||||||   || |||||||||||| | |  ||||   |||||    
T  11799459 ttgttctaaaatgaatgtcatttcaagttttcaatacaatagtaagtttttctttttaattgtaatatttaattaatactatgtgcattactcttaaagt 11799558  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaa 257  Q
    |||| |||| |||||| | ||||||||  |||| || || | |||| | ||||||||||||| |||| ||||||||||    
T  11799559 attacttttactttaatggaaaacaaatcaataattaataaggatagtgtggtaaaataacaattctctttcttttaa 11799636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 313
Target Start/End: Complemental strand, 14373563 - 14373344
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatt 182  Q
    ||||||||||||||||  ||||||||| |||| | | ||||| ||||| ||||||||| |||||| ||||||||| | |  ||  |||||  ||||||||    
T  14373563 ttttaaaatgaatgtcattttcagtttccaatgcaacaataactttttattttcaattataccctccaattaataatctgcacactactttcaaagtatt 14373464  T
Q  183 attttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtg 282  Q
    ||||||          ||||| ||| ||||||| || | |||||||||||||||||||  |||||||||||||||| | ||||       ||||| ||||    
T  14373463 attttt----------aaaactaaccaatagttaataaggataatttggtaaaataaccattctttttcttttaatcattgca-tttcttaatatgtgtg 14373375  T
Q  283 taaaaactttaaacgacattcattttgaaac 313  Q
    |||| || | |||||||||||||||| ||||    
T  14373374 taaacacctaaaacgacattcattttaaaac 14373344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 24884416 - 24884493
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatacta 160  Q
    ||||||||| |||||| |||||| ||| |||| | ||||||| ||||| ||||||||| |||||||||||||||||||    
T  24884416 ttttaaaataaatgtcactttcaatttccaatgcaataataactttttattttcaattatacccttcaattaatacta 24884493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 46271468 - 46271386
Alignment:
Q  82 gttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatata 164  Q
    |||| ||||||||||||  ||||||||| ||||   ||||||||||||| ||||||||  ||| |||||||||||||||||||    
T  46271468 gtttcaaaatgaatgtcattttcagtttccaatggaataataattttttattttcaataatacacttcaattaatactatata 46271386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 43358353 - 43358272
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat 161  Q
    |||||| || |||||| || |||||| |||||||| | |||||||  |||| ||||||||||||| ||||||||||||||||    
T  43358353 ttgtttcaatatgaatatcactttcacttttcaatgcaataataacattttattttcaattgtactcttcaattaatactat 43358272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 24483386 - 24483450
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtac 144  Q
    |||||| ||||||||||||  ||||||||| |||||| ||||||| | |||||||||||||||||    
T  24483386 ttgtttcaaaatgaatgtcagtttcagtttccaatacaataataactgtttcttttcaattgtac 24483450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 33694446 - 33694390
Alignment:
Q  209 aatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    ||||||||||||  |||||||||||||||||||| ||| ||| ||||||||||||||    
T  33694446 aatagttgattagaataatttggtaaaataacatatctctttattttaattaatgca 33694390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 157
Target Start/End: Complemental strand, 49403023 - 49402947
Alignment:
Q  81 tgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaata 157  Q
    ||||| ||||| ||| ||| ||||||||| |||| | ||||||| ||||||||||||||||||| || |||||||||    
T  49403023 tgtttcaaaataaatatcgttttcagtttccaatgcaataataactttttcttttcaattgtactctccaattaata 49402947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 161
Target Start/End: Complemental strand, 7214185 - 7214108
Alignment:
Q  81 tgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat 161  Q
    ||||||||||| |||||| |||   ||||||||| | ||||||| |||||||||| |||| ||| ||||||||||||||||    
T  7214185 tgttttaaaataaatgtcactt---gttttcaatgcaataataaatttttctttttaattatacgcttcaattaatactat 7214108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 30292938 - 30293012
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaatta 154  Q
    ||||||||||||||||| | |||||||||| |||| | ||||||| ||| | ||||||| |||||||| ||||||    
T  30292938 ttgttttaaaatgaatgccactttcagtttccaatgcaataataactttgttttttcaactgtaccctccaatta 30293012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 12484781 - 12484704
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaata 157  Q
    |||||| ||||||||| ||  ||||| ||  |||||| ||||||| ||||||||||||| |||||||| |||||||||    
T  12484781 ttgtttcaaaatgaatttcattttcatttgccaatacaataataactttttcttttcaactgtaccctccaattaata 12484704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 416
Target Start/End: Complemental strand, 10843028 - 10842988
Alignment:
Q  376 aatataatacttcatccgtttcaaaatgactgtcgttttag 416  Q
    ||||||||||| ||||||||||||||||| |||||||||||    
T  10843028 aatataatactccatccgtttcaaaatgagtgtcgttttag 10842988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 313
Target Start/End: Complemental strand, 28410779 - 28410739
Alignment:
Q  273 aatatatgtgtaaaaactttaaacgacattcattttgaaac 313  Q
    ||||| ||||||| |||||||||||||||||||||||||||    
T  28410779 aatatgtgtgtaacaactttaaacgacattcattttgaaac 28410739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 260
Target Start/End: Original strand, 38947695 - 38947772
Alignment:
Q  182 tattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaatta 260  Q
    |||||||||||||| |||||| || | ||| ||| |||| | |||||||||||||||| || ||| |||||||||||||    
T  38947695 tattttttctttaatgaaaaaaaatc-aatggttaattatggtaatttggtaaaataatatctctctttcttttaatta 38947772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 41857311 - 41857393
Alignment:
Q  80 ttgttttaaaatgaatgtcgcttt-cagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat 161  Q
    ||||||||||||||| |||  ||| || ||| |||||| ||||||||||||  ||||||||| ||||||  ||||||||||||    
T  41857311 ttgttttaaaatgaacgtcatttttcattttccaatacaataataatttttctttttcaattataccctctaattaatactat 41857393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 417
Target Start/End: Complemental strand, 49426613 - 49426575
Alignment:
Q  379 ataatacttcatccgtttcaaaatgactgtcgttttagc 417  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  49426613 ataatacttcctccgtttcaaaatgaatgtcgttttagc 49426575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 8565943 - 8565986
Alignment:
Q  273 aatatatgtgtaaaaactttaaacgacattcattttgaaacagag 317  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||||    
T  8565943 aatatgtgtgtaaaaaccttaa-cgacattcattttgaaacagag 8565986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 317
Target Start/End: Complemental strand, 12484599 - 12484555
Alignment:
Q  273 aatatatgtgtaaaaactttaaacgacattcattttgaaacagag 317  Q
    ||||| ||||||||||| ||||||| ||||||||||| |||||||    
T  12484599 aatatgtgtgtaaaaaccttaaacggcattcattttgtaacagag 12484555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 157
Target Start/End: Original strand, 39125647 - 39125723
Alignment:
Q  81 tgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaata 157  Q
    ||||| ||||||| ||||  ||| |||||||||| | ||||||| ||||||||| || || ||||||||||| ||||    
T  39125647 tgtttcaaaatgactgtcattttaagttttcaatgcaataataaatttttctttccagttctacccttcaatcaata 39125723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 237
Target Start/End: Complemental strand, 43358237 - 43358209
Alignment:
Q  209 aatagttgattaagataatttggtaaaat 237  Q
    |||||||||||||||||||||||||||||    
T  43358237 aatagttgattaagataatttggtaaaat 43358209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 3e-61; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 80 - 316
Target Start/End: Original strand, 6374412 - 6374644
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||| ||||||||||||||| | ||||||| |||||||||||||||||||| ||||||||||| |||||||  |||||| |||||    
T  6374412 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacc-ttcaattaatattatatacattacttccaaagt 6374510  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatat 279  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||  ||||||| |||||||||||| |       |||||||    
T  6374511 attattttttctttaatgaaaaacaaactaatagttgattatgataatttggtaaaataaca--tcttttttttttaattaatgta-tttcctaatatat 6374607  T
Q  280 gtgtaaaaactttaaacgacattcattttgaaacaga 316  Q
     | ||||||| ||||||||| |||||||| |||||||    
T  6374608 ttataaaaaccttaaacgacgttcattttaaaacaga 6374644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 83 - 317
Target Start/End: Original strand, 34156535 - 34156769
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataatttt-ttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtat 181  Q
    ||||||||||||| || ||| | |||| |||| | ||||||||||| ||||||||||||||||||||||||||||||||| |||  |||||| ||| |||    
T  34156535 ttttaaaatgaatatcacttacggtttccaatgcaataataatttttttcttttcaattgtacccttcaattaatactatgtacactacttccaaaatat 34156634  T
Q  182 tattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgt 281  Q
    |||||||||||||| ||||||||||| ||| |||||||| ||||||||| ||||||||||  ||| ||||||||||||||||||       ||||||  |    
T  34156635 tattttttctttaatgaaaaacaaaccaatggttgattatgataatttgataaaataacagctctatttcttttaattaatgca-tttcataatatacat 34156733  T
Q  282 gtaaaaactttaaacgacattcattttgaaacagag 317  Q
    |||||||||||||||| |||||||||||||||||||    
T  34156734 gtaaaaactttaaacgccattcattttgaaacagag 34156769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 136 - 317
Target Start/End: Complemental strand, 40399975 - 40399796
Alignment:
Q  136 caattgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaa 235  Q
    |||||||||| ||||||||||| |||||||  |||||  ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  40399975 caattgtacc-ttcaattaatattatatacactactttcaaagtattattttttctttaatgaaaaacaaactaatagttgattatgataatttggtaaa 40399877  T
Q  236 ataacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacgacattcattttgaaacagag 317  Q
    ||||||| ||| ||||||||||||||||||       |||||||||||||||||||||||||||||| ||||||||||||||    
T  40399876 ataacatatctctttcttttaattaatgca-tttcttaatatatgtgtaaaaactttaaacgacatttattttgaaacagag 40399796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 80 - 255
Target Start/End: Complemental strand, 45359049 - 45358874
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| ||||||| ||||  ||||| |||||||| | ||||||||||||||||||||||||||   ||||||||||| |||||||  |||||| |||||    
T  45359049 ttgtttcaaaatgactgtcattttcaattttcaatgcaataataattttttcttttcaattgtatttttcaattaatattatatacactacttccaaagt 45358950  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttctttt 255  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||| ||||||| ||||    
T  45358949 attattttttctttaatgaaaaacaaactaatagttgattaaaataattcggtaaaataacatctctttttatttt 45358874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 40 - 237
Target Start/End: Original strand, 39463217 - 39463413
Alignment:
Q  40 ccctccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaat 139  Q
    |||||||||| | |||||||||||||||||          |||||| |||||||||||| |||||||||| |||| | ||||||| ||||||||||||||    
T  39463217 ccctccgtttcaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaat 39463316  T
Q  140 tgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||||||||||||  |||||| ||||||||||||||||||||| ||||||||||| || ||||||||| ||||| ||||||||||    
T  39463317 tgtacccttcaattaatactatatacactacttccaaagtattattttttctttaatgaaaaacaaaccaacagttgattaggataa-ttggtaaaat 39463413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 80 - 313
Target Start/End: Original strand, 9812171 - 9812403
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    ||||||||||||||||||| ||||||||||  ||| | ||||||| ||||| |||||||||||||| ||||| ||||| |||||||  |||||  |||||    
T  9812171 ttgttttaaaatgaatgtcactttcagtttctaatgcaataataactttttattttcaattgtacctttcaagtaatattatatacactactttcaaagt 9812270  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatat 279  Q
    |  ||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||| | | ||| ||||||||| ||||       ||||| |    
T  9812271 acaattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataacatctttctttattttaattagtgca-tttcttaatatgt 9812369  T
Q  280 gtgtaaaaactttaaacgacattcattttgaaac 313  Q
    || ||||||| ||||||| |||||||||||||||    
T  9812370 gtataaaaaccttaaacggcattcattttgaaac 9812403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 80 - 265
Target Start/End: Complemental strand, 34796833 - 34796651
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||  |||| |||||  ||| | |||||||||||||||||||||||| ||||||||||||||  |||||||  |||||| |||||    
T  34796833 ttgtttcaaaatgaatgttccttttagtttctaatgcaataataattttttcttttcaattgaacccttcaattaat--tatatacactacttccaaagt 34796736  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    |||||||||| ||||| ||||||||||| |||||||||||| ||||||||| ||||||||||| ||| ||||||||||||||||||    
T  34796735 attatttttt-tttaatgaaaaacaaaccaatagttgattaggataatttgataaaataacatatctctttcttttaattaatgca 34796651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 39698821 - 39698663
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||||||| |||| | ||||||| ||||||||||||||||||||||||||||||||||||  |||  |||||| |||     
T  39698821 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacattacttccaaaa 39698722  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  39698721 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 39698663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 514875 - 515048
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaat---taatactatatacggtacttcaaaagt 179  Q
    |||||||||||||||| |||||| |||||||| | |||||||||||||||||||||||||| ||||||||   |||||||||||||  ||||||  ||||    
T  514875 ttttaaaatgaatgtcactttcaattttcaatgcaataataattttttcttttcaattgtatccttcaattaataatactatatacactacttccgaagt 514974  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttctt 253  Q
    ||||| |||||| ||| ||||||||||| |||||||||||| ||||||||| ||||||||||| ||| ||||||    
T  514975 attatattttctataatgaaaaacaaaccaatagttgattaggataatttgctaaaataacatctctctttctt 515048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 40228572 - 40228730
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    |||||| |||||||||||| ||||||||||||||| | ||||||| |||||||||||||||||||  ||||||||||| ||| | ||  |||||| ||||    
T  40228572 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacatttcaattaatattatgttacattacttccaaag 40228671  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  40228672 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 40228730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 4760713 - 4760556
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    ||||||||||||||||||| |||||| ||| |||| | | ||||||||||||||||||||||||||||||||||||||||||  |||  |||||  ||||    
T  4760713 ttgttttaaaatgaatgtcactttcattttccaatgcaacaataattttttcttttcaattgtacccttcaattaatactatgttacactactttcaaag 4760614  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||| ||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  4760613 tatta-tttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 4760556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 43448714 - 43448872
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    |||||| ||||||||| || |||||||||| |||| | ||||||| ||||| |||||||||||||||||||||||||||||  | ||  |||||  ||||    
T  43448714 ttgtttcaaaatgaatatcactttcagtttccaatgcaataataacttttttttttcaattgtacccttcaattaatactacgttacattactttcaaag 43448813  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  43448814 tattattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaat 43448872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 87 - 313
Target Start/End: Complemental strand, 5295554 - 5295329
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattatt- 185  Q
    |||||||||||| |||| |||||  ||| | |||||||||||||||||||||||||||||||||||||||| |||||||  |||||| ||| |||||||     
T  5295554 aaaatgaatgtcactttaagtttctaatgcaataataattttttcttttcaattgtacccttcaattaatattatatacactacttccaaaatattattt 5295455  T
Q  186 ttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaa 285  Q
    ||||| ||||  |||||||||  |||||||||||| |||||||||||||||| | || ||| ||||||||||| ||| ||       ||||| |||||||    
T  5295454 ttttcattaataaaaaacaaagcaatagttgattaggataatttggtaaaat-atatatctctttcttttaatcaataca-tttcttaatatgtgtgtaa 5295357  T
Q  286 aaactttaaacgacattcattttgaaac 313  Q
    ||||||||||| ||||||||||| ||||    
T  5295356 aaactttaaacaacattcattttaaaac 5295329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 84 - 263
Target Start/End: Complemental strand, 29312344 - 29312164
Alignment:
Q  84 tttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaa---agta 180  Q
    |||||||||||||||  ||||||||| |||| | |||||||   ||| ||||||||||||| ||||||||||||||||||||  ||||||| |   ||||    
T  29312344 tttaaaatgaatgtcattttcagtttccaatgcaataataaccgtttgttttcaattgtactcttcaattaatactatatacactacttcagaagtagta 29312245  T
Q  181 ttattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatg 263  Q
    ||||||||||||||| ||||||||||| ||||||||||||  ||||||  |||||||||||| ||||||||||||||||||||    
T  29312244 ttattttttctttaatgaaaaacaaaccaatagttgattagtataatt--gtaaaataacatctctttttcttttaattaatg 29312164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 80 - 263
Target Start/End: Complemental strand, 14234373 - 14234187
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaata---ctatatacggtacttcaaa 176  Q
    ||||||||||||||||||| |||| | |||  ||| | |||||||| |||| ||||||||||||||||| | ||||||   ||||||||  |||||| ||    
T  14234373 ttgttttaaaatgaatgtcacttttaatttctaatgcaataataatatttttttttcaattgtaccctttagttaataatactatatacactacttccaa 14234274  T
Q  177 agtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatg 263  Q
    | ||||||||||||||||| ||||||||||| |||||||||||| |||||||||| |||||||||| ||| |||| |||||||||||    
T  14234273 aatattattttttctttaacgaaaaacaaaccaatagttgattaggataatttggcaaaataacatatctctttcgtttaattaatg 14234187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 40 - 237
Target Start/End: Original strand, 17920914 - 17921113
Alignment:
Q  40 ccctccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaat 139  Q
    |||||||||||| ||||| |||||||||||          ||||||||||||||||||| ||||||||||||||| | ||||||| ||||||||| ||||    
T  17920914 ccctccgttttaaaatgaatgtcgttttagcaaaaaaaaattgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctttacaat 17921013  T
Q  140 tgtacccttcaattaatactat-atacggtacttcaaaagtatta-ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||| |||||||||||| |||  |||  |||||| ||||||||| |||||||||||| ||||||||||| ||||||||||||  |||||||||||||||    
T  17921014 tgtactcttcaattaatattatgttacactacttccaaagtattatttttttctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaat 17921113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 133 - 312
Target Start/End: Complemental strand, 15750435 - 15750253
Alignment:
Q  133 tttcaattgtacccttcaattaata---ctatatacggtacttcaaaagtattatttttt-ctttaaggaaaaacaaactaatagttgattaagataatt 228  Q
    |||||||||||||||||||||||||   ||||||||  |||||| ||||||||||||||| |||||| |||||| |||| |||||||||||| |||||||    
T  15750435 tttcaattgtacccttcaattaataatactatatacactacttccaaagtattatttttttctttaatgaaaaataaaccaatagttgattaggataatt 15750336  T
Q  229 tggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacgacattcattttgaaa 312  Q
    ||||||||||| || ||| |||||||||||||||| |       ||||| |||||||||||| |||||||||||||||||||||    
T  15750335 tggtaaaataatatctctctttcttttaattaatgta-tttcttaatatgtgtgtaaaaactataaacgacattcattttgaaa 15750253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 83 - 237
Target Start/End: Complemental strand, 43084779 - 43084624
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaagtat 181  Q
    |||||||||||||||| ||||||||||||||| | ||||||| |||||||||||||||||||| |||||||||||||||  |||  |||||| |||  ||    
T  43084779 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacctttcaattaatactatgttacactacttccaaaaaat 43084680  T
Q  182 tattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||||||| |||| |||||| |||||||||||| | ||||||||||||||    
T  43084679 tattttttctttaatgaaacacaaaccaatagttgattagggtaatttggtaaaat 43084624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 80 - 265
Target Start/End: Original strand, 15227565 - 15227753
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||| ||||||  ||||||| | ||||||| | |||||||||||| |||| ||||||||||||||||||||   ||||  |||||    
T  15227565 ttgtttcaaaatgaatgtcactttcaaatttcaatgcaataataaatgtttcttttcaatggtacacttcaattaatactatatacacaactttcaaagt 15227664  T
Q  180 attatttt---ttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    ||||||||   |||||||| |||||||||||||||  |||||||  |||||||| ||||||||||| | ||||||||||||||||||||    
T  15227665 attatttttttttctttaatgaaaaacaaactaatgattgattagaataatttgataaaataacatctttttttcttttaattaatgca 15227753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 40 - 237
Target Start/End: Original strand, 4989437 - 4989634
Alignment:
Q  40 ccctccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaat 139  Q
    |||||||||||| ||||||||||||||||||         |||||| ||||||||| || |||||||||| |||| | ||||||| ||||||||||||||    
T  4989437 ccctccgttttaaaatgagtgtcgttttagtaaaaaaaa-ttgtttcaaaatgaatatcactttcagtttccaatgcaataataactttttcttttcaat 4989535  T
Q  140 tgtacccttcaattaatactat-atacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||||||||||| |||  |||  |||||  ||||||||||||||||||||| ||||||||||  ||||||||| || |||||||||| |||||    
T  4989536 tgtacccttcaattaatattatgttacactacttacaaagtattattttttctttaatgaaaaacaaatcaatagttgagtaggataatttgggaaaat 4989634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 40 - 237
Target Start/End: Complemental strand, 9880695 - 9880498
Alignment:
Q  40 ccctccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaat 139  Q
    |||||||||||| ||||||||||||||||||         |||||| |||||||||||| ||  |||||| |||| | ||||||||||||||||||||||    
T  9880695 ccctccgttttaaaatgagtgtcgttttagtcaaaaaaa-ttgtttcaaaatgaatgtcactcacagtttccaatgcaataataattttttcttttcaat 9880597  T
Q  140 tgtacccttcaattaatactat-atacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    | | ||||||||||||||||||  |||  |||||| ||||||||||||||||||||| |||||| |||  |||||||||||| |||||||| |||||||    
T  9880596 tatgcccttcaattaatactatgttacactacttccaaagtattattttttctttaatgaaaaataaatcaatagttgattaggataatttcgtaaaat 9880498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 43 - 313
Target Start/End: Complemental strand, 6116197 - 6115927
Alignment:
Q  43 tccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgt 142  Q
    ||||||| |||||||||||||||||||          |||||||||||||||| || ||||| ||||||||| | ||||||| ||||||||||||||| |    
T  6116197 tccgtttcagaatgagtgtcgttttagcaaaaaaaaattgttttaaaatgaatatcactttcggttttcaatgcaataataactttttcttttcaattat 6116098  T
Q  143 acccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgatt-------aagataatttggtaaa 235  Q
    |||||||  ||||||||||||||  |||||| || |      ||||| ||||| ||||||||||| |||||||||||       ||||||| ||||||||    
T  6116097 acccttcgtttaatactatatacactacttccaagg------tttttttttaatgaaaaacaaaccaatagttgattaagataaaagataagttggtaaa 6116004  T
Q  236 ataacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacgacattcattttgaaac 313  Q
    ||||||| ||  ||||||||||||||||||       ||||| ||||||||||| |||||||||| ||||||||||||    
T  6116003 ataacatctccctttcttttaattaatgca-ttttttaatatgtgtgtaaaaaccttaaacgacactcattttgaaac 6115927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 87 - 265
Target Start/End: Original strand, 13496240 - 13496421
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagta---tta 183  Q
    |||||||||||   ||||| ||| |||| | |||||||  ||||||||||||||||||  ||||||||||||| |||||  |||||| ||||||   |||    
T  13496240 aaaatgaatgttattttcaatttccaatgcaataataacgttttcttttcaattgtacaattcaattaatactgtatacactacttccaaagtagtatta 13496339  T
Q  184 ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    ||||||||| || ||||||||||| |||| ||||||| ||||||||||||||||||||| | | ||||||||||||||||||    
T  13496340 ttttttcttgaaagaaaaacaaaccaataattgattaggataatttggtaaaataacatctttctttcttttaattaatgca 13496421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 42 - 237
Target Start/End: Complemental strand, 9304826 - 9304631
Alignment:
Q  42 ctccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattg 141  Q
    |||||||||| |||||||||||||||| |         |||||| |||||||||||  |||| ||||| |||| | ||||||||||||||||||||||||    
T  9304826 ctccgttttaaaatgagtgtcgttttaattaaaaaaaattgtttcaaaatgaatgtgacttttagtttccaatgcaataataattttttcttttcaattg 9304727  T
Q  142 tacccttcaattaatacta---tatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||||||||  ||   |||||  |||||| ||| ||||||||||||||||| ||||||||||  |||||||||||| ||||||||||||||||    
T  9304726 tacccttcaattaatgttatgttatac--tacttccaaaatattattttttctttaa-gaaaaacaaatcaatagttgattaggataatttggtaaaat 9304631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 100 - 237
Target Start/End: Complemental strand, 31899383 - 31899245
Alignment:
Q  100 ctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaagtattattttttctttaagga 198  Q
    |||||||||| |||| | ||||||||||||||||||||||||||| |||||||||||| ||| | ||  |||||| |||||||||| |||||||||| ||    
T  31899383 ctttcagtttccaatgcaataataattttttcttttcaattgtactcttcaattaatattatgttacactacttccaaagtattatcttttctttaatga 31899284  T
Q  199 aaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||  |||||||||||| ||||||||||||||||    
T  31899283 aaaacaaatcaatagttgattaggataatttggtaaaat 31899245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 31693776 - 31693616
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||||||||||||| || ||||||||||||||| | ||||||| |||||||||||||||||||| ||||||||||| |||  |||  || ||| ||||    
T  31693776 ttgttttaaaatgaatatcactttcagttttcaatgcaataataactttttcttttcaattgtacctttcaattaatattatgttacacta-ttccaaag 31693678  T
Q  179 tattattttttctttaaggaaaaacaaactaat---agttgattaagataatttggtaaaat 237  Q
    ||||||||| ||||||| |||||||||||||||   ||||||||| |||||||| |||||||    
T  31693677 tattattttatctttaatgaaaaacaaactaataccagttgattaggataatttagtaaaat 31693616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 7839456 - 7839614
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||| ||| |||| | |||||||  |||||||||||||| |||| ||||||||||| ||| | ||  |||||| |||     
T  7839456 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataaccttttcttttcaattttacctttcaattaatattatgttacactacttccaaaa 7839555  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| |||||| |||| |||||||||||||||||||| ||||||||    
T  7839556 tattattttttctttaatgaaaaataaaccaatagttgattaagataattcggtaaaat 7839614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 118 - 313
Target Start/End: Complemental strand, 13368065 - 13367873
Alignment:
Q  118 ataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttga 217  Q
    |||||||  ||||||||||||||| ||||||||||||||| |||||||  |||||| ||||||||||||||||||||| |||||| |||| | || ||||    
T  13368065 ataataacattttcttttcaattgcacccttcaattaatattatatacactacttccaaagtattattttttctttaatgaaaaataaaccagtaattga 13367966  T
Q  218 ttaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacgacattcattttgaaac 313  Q
    ||| |||||| |||||||||||||  |||| || ||||||||||| ||       ||||| ||||||||||| |||||| | ||| ||||||||||    
T  13367965 ttaggataatatggtaaaataaca--tcttctttttttaattaataca-tttcttaatatgtgtgtaaaaaccttaaacaatatttattttgaaac 13367873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 142 - 263
Target Start/End: Original strand, 42179155 - 42179276
Alignment:
Q  142 tacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataaca 241  Q
    |||| |||||||||||||||||||  || || |||||||||||||||||||||| ||||||||||||||||||| |||| |||||||| |||||||| ||    
T  42179155 taccattcaattaatactatatacactattttaaaagtattattttttctttaatgaaaaacaaactaatagttaattatgataatttagtaaaatatca 42179254  T
Q  242 tttctttttcttttaattaatg 263  Q
    |  || ||||||||||||||||    
T  42179255 tcactctttcttttaattaatg 42179276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 29025901 - 29025746
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||| ||||||| |||| ||||| |||| | ||||||| ||||||||||||||| ||||||||||||||||||||  |||   ||||| || |    
T  29025901 ttgtttcaaaacgaatgtcactttaagtttccaatgcaataataactttttcttttcaattctacccttcaattaatactatgttac---acttccaatg 29025805  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||||||||||  |||||||||  |||||||||||| ||||||||||||||||    
T  29025804 tattattttttctttaataaaaaacaaatcaatagttgattaggataatttggtaaaat 29025746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 44713532 - 44713688
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    |||||||||||||||| || |||||| ||| |||| | ||||||| ||||| ||||||||| |||||||||||||||| | | | ||  |||||  |||     
T  44713532 ttgttttaaaatgaatatcactttcattttccaatgcaataataacttttttttttcaattatacccttcaattaatattgtgttacactactttcaaaa 44713631  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaa 235  Q
    ||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||    
T  44713632 tattattttttctttaatgaaaaataaactaatagttgattatgataatttggtaaa 44713688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 90 - 317
Target Start/End: Complemental strand, 31234084 - 31233863
Alignment:
Q  90 atgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtaccctt-caattaatactatatacggtacttcaaaagtattattttt 188  Q
    ||||||||| |||| |||||| ||| | ||||||| || || |||||||||||| |||| ||||||||| ||||||||||||||| ||| ||||||||||    
T  31234084 atgaatgtcacttttagtttttaatgcaataataacttctt-ttttcaattgtatcctttcaattaatattatatacggtacttctaaattattattttt 31233986  T
Q  189 tctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaaaaa 288  Q
     |||||| |||||| |||| |||||||||||| ||| |||| ||||| |||     |||||| |||||||||||| |       ||||| ||||||||||    
T  31233985 cctttaatgaaaaataaaccaatagttgattaggatgattttgtaaagtaa-----cttttttttttaattaatgta-tttcttaatatgtgtgtaaaaa 31233892  T
Q  289 ctttaaacgacattcattttgaaacagag 317  Q
      |||| ||||||||||||||||||||||    
T  31233891 tcttaagcgacattcattttgaaacagag 31233863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 80 - 265
Target Start/End: Complemental strand, 2375996 - 2375816
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||||||||||| | ||  |||||||||| ||||| |||| || ||| |||||| || |||||||||||||||||| |||||||  || ||| ||       
T  2375996 ttgttttaaaatgattatcattttcagtttttaatacaataacaactttatctttttaactgtacccttcaattaataatatatacactatttccaa--- 2375900  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
      | |||||||||||| ||||||||||| |||  |||||||||| |||||| ||||||||||| ||| ||||||||||||||||||    
T  2375899 --ttttttttctttaatgaaaaacaaaccaatgattgattaagacaatttgataaaataacatctctctttcttttaattaatgca 2375816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 101 - 265
Target Start/End: Original strand, 41679338 - 41679495
Alignment:
Q  101 tttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaa 200  Q
    |||||||||||||||| ||||||| |||||||||| |||| ||  |||||| ||||||     ||  |||||  ||| ||||||||||||||||| ||||    
T  41679338 tttcagttttcaatacaataataactttttctttttaattttattcttcaactaatac-----ac--tacttttaaaatattattttttctttaatgaaa 41679430  T
Q  201 aacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    | ||||| |||||||||||| ||||||||||||||||||||  ||| ||||||||||||||||||    
T  41679431 atcaaaccaatagttgattatgataatttggtaaaataacacctctctttcttttaattaatgca 41679495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 155 - 265
Target Start/End: Complemental strand, 43970131 - 43970022
Alignment:
Q  155 atactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttt 254  Q
    |||||||||||  |||||| |||||||||||||||||||||  ||| |||||  |||||||||||| ||||||||| ||||||||||||| |||||||||    
T  43970131 atactatatacattacttctaaagtattattttttctttaataaaagacaaatcaatagttgattaggataatttgataaaataacattt-tttttcttt 43970033  T
Q  255 taattaatgca 265  Q
    |||||||||||    
T  43970032 taattaatgca 43970022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 118 - 207
Target Start/End: Original strand, 19574423 - 19574513
Alignment:
Q  118 ataataattttttcttttcaattgtacccttcaattaatactata-tacggtacttcaaaagtattattttttctttaaggaaaaacaaac 207  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||  |||||| ||| ||||||||||||||||| |||||||||||    
T  19574423 ataataactttttcttttcaattgtacccttcaattaatactatattacactacttccaaaatattattttttctttaatgaaaaacaaac 19574513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 37559688 - 37559609
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatact 159  Q
    |||||||||||| |||||| |||||||||| |||||| ||||||| |||||||||||||||||||||| |||||||||||    
T  37559688 ttgttttaaaatcaatgtcactttcagtttccaatacaataataactttttcttttcaattgtaccctccaattaatact 37559609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 40362433 - 40362512
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatact 159  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||| ||||||||||||||| |||||| |||||||||||    
T  40362433 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattttaccctccaattaatact 40362512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 36669857 - 36669791
Alignment:
Q  171 ttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  36669857 ttcaaaaatattattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaat 36669791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 88 - 207
Target Start/End: Original strand, 19438242 - 19438363
Alignment:
Q  88 aaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactata-tacggtacttcaaaagta-ttatt 185  Q
    |||| |||||| || ||||||| ||||   ||||||| ||||||||||||||||||||||||||||||||||||| |||  |||||| ||| || |||||    
T  19438242 aaataaatgtcactctcagtttccaatgtaataataactttttcttttcaattgtacccttcaattaatactatattacactacttccaaaatatttatt 19438341  T
Q  186 ttttctttaaggaaaaacaaac 207  Q
    |||||||||| |||||||||||    
T  19438342 ttttctttaatgaaaaacaaac 19438363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 15160601 - 15160522
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatact 159  Q
    |||||| |||||||||||| |||||||||| |||| | ||||||| |||||||||||||||||||||| |||||||||||    
T  15160601 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatact 15160522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 43561387 - 43561491
Alignment:
Q  146 cttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttc 245  Q
    ||||||||||||| |||||   |||||  ||||||||||||||||||||| |||||| ||| ||||  ||||||||||||||||| ||||||||| |||     
T  43561387 cttcaattaataccatatattctactttcaaagtattattttttctttaatgaaaaataaattaatgattgattaagataatttgataaaataacttttt 43561486  T
Q  246 ttttt 250  Q
    |||||    
T  43561487 ttttt 43561491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 85 - 159
Target Start/End: Original strand, 36921360 - 36921434
Alignment:
Q  85 ttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatact 159  Q
    |||||||||| ||| |||||| |||||||| | |||||||||||||||||||||||||||| | |||||||||||    
T  36921360 ttaaaatgaacgtcactttcaattttcaatgcaataataattttttcttttcaattgtaccttccaattaatact 36921434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 39766014 - 39765907
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||| ||||||||||||||| | ||||||| ||||||||||| | |||||||| ||||||||||| |  ||  |||||| |||||    
T  39766014 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttc-actgtaccctccaattaatactctgcacactacttccaaagt 39765916  T
Q  180 attattttt 188  Q
    |||| ||||    
T  39765915 attactttt 39765907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 396369 - 396290
Alignment:
Q  80 ttgttttaaaatgaatgtcgcttt-cagttttcaatacgataataattttttcttttcaattgtacccttcaattaatact 159  Q
    ||||||||||||||||||| |||| ||||||  ||| | ||||||| ||||||||||||||||||||| ||||||||||||    
T  396369 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttcttttcaattgtaccc-tcaattaatact 396290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 83 - 312
Target Start/End: Original strand, 12339712 - 12339941
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttt-tcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt-- 179  Q
    ||||||||||||||||  ||| |||||||||||| |||||||||||| | ||| ||||||||| || ||||||||| |||| ||  |||||| ||| |      
T  12339712 ttttaaaatgaatgtcatttttagttttcaatacaataataatttttctttttccaattgtacactccaattaatagtatacacactacttccaaaatac 12339811  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatat 279  Q
    || | |||| || ||| ||||||| ||| |||| |  || |  ||||||| ||||||||||| |||  | ||||||||| | ||||       ||||| |    
T  12339812 atgaattttactataatgaaaaactaaccaataatcaataagaataattttgtaaaataacaattc--tctcttttaatcattgca-tttcttaatatgt 12339908  T
Q  280 gtgtaaaaactttaaacgacattcattttgaaa 312  Q
    |||||||||| ||||||||||||||||||||||    
T  12339909 gtgtaaaaaccttaaacgacattcattttgaaa 12339941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 40400441 - 40400505
Alignment:
Q  81 tgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacc 145  Q
    |||||||||||||||||| |||| |||||  ||||  ||||||||||||||||||||||||||||    
T  40400441 tgttttaaaatgaatgtcacttttagtttctaatataataataattttttcttttcaattgtacc 40400505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 127 - 237
Target Start/End: Complemental strand, 5790756 - 5790643
Alignment:
Q  127 ttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaagtatta--ttttttctttaaggaaaaacaaactaatagttgattaaga 223  Q
    |||||||||||||| || ||||||||||||| |||  |||  |||||  ||| |||||  |||||||| ||| ||||| ||||| |||||||||||| ||    
T  5790756 ttttcttttcaattttatccttcaattaatattatcttacactactttcaaaatattattttttttctctaatgaaaagcaaaccaatagttgattagga 5790657  T
Q  224 taatttggtaaaat 237  Q
    ||||||||||||||    
T  5790656 taatttggtaaaat 5790643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 35356312 - 35356382
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaata 157  Q
    ||||||||| ||  ||||||||| |||| | ||||||| ||||||||||||||| ||||||||||||||||    
T  35356312 aaaatgaatatcattttcagtttccaatgcaataataactttttcttttcaattatacccttcaattaata 35356382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 17655927 - 17655984
Alignment:
Q  102 ttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatact 159  Q
    ||||||||||||| | ||||||| ||||||||||||| |||||||| |||||||||||    
T  17655927 ttcagttttcaatgcaataataactttttcttttcaactgtaccctccaattaatact 17655984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 43594830 - 43594887
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaatt 140  Q
    ||||||||||||||||||||| | |||||||||| ||||||| ||||| |||||||||    
T  43594830 ttttaaaatgaatgtcgcttttaattttcaatacaataataactttttattttcaatt 43594887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 43724379 - 43724459
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttctt-ttcaattgtacccttcaattaatact 159  Q
    |||||| ||||||||| || |||||||||| |||| | ||||||||||||| || |||||||||||| | |||||||||||    
T  43724379 ttgtttcaaaatgaatttcactttcagtttccaatgcaataataatttttttttcttcaattgtaccttccaattaatact 43724459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 44342918 - 44342865
Alignment:
Q  103 tcagttttcaatacgataataattttttcttttcaattgtacccttcaattaat 156  Q
    ||||||| |||||  ||||||| ||||||||||||||||||||||| |||||||    
T  44342918 tcagtttccaatataataataactttttcttttcaattgtaccctttaattaat 44342865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 449
Target Start/End: Complemental strand, 14234418 - 14234350
Alignment:
Q  381 aatacttcatccgtttcaaaatgactgtcgttttagcnnnnnnnnttgtttcaaaatgaatgtcacttt 449  Q
    |||||||||||||||| ||||||| ||||||||||||        |||||| |||||||||||||||||    
T  14234418 aatacttcatccgttttaaaatgagtgtcgttttagcaaaaaaaattgttttaaaatgaatgtcacttt 14234350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 40400126 - 40400066
Alignment:
Q  85 ttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacc 145  Q
    |||||||||||||  |||| ||||| |||| | | ||||||||||||||||||||||||||    
T  40400126 ttaaaatgaatgtgacttttagtttccaatgcaacaataattttttcttttcaattgtacc 40400066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 143
Target Start/End: Original strand, 1511495 - 1511550
Alignment:
Q  88 aaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgta 143  Q
    ||||||||||| |||| | |||||||||| ||| ||||||| ||||||||||||||    
T  1511495 aaatgaatgtcacttttatttttcaatacaatattaattttctcttttcaattgta 1511550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 417
Target Start/End: Complemental strand, 18673301 - 18673263
Alignment:
Q  379 ataatacttcatccgtttcaaaatgactgtcgttttagc 417  Q
    |||||||| ||||||||||||||||| ||||||||||||    
T  18673301 ataatactccatccgtttcaaaatgagtgtcgttttagc 18673263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 43561341 - 43561386
Alignment:
Q  84 tttaaaatgaatgtcgctttcagttttcaatacgataataattttt 129  Q
    ||||||||||||||| | ||||||||||||| | ||||||||||||    
T  43561341 tttaaaatgaatgtcaccttcagttttcaatgcaataataattttt 43561386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 43974939 - 43974886
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaatt 140  Q
    |||||||||||| |||| ||||| |||| | ||||||| |||||||||||||||    
T  43974939 aaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaatt 43974886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 313
Target Start/End: Complemental strand, 24245180 - 24245140
Alignment:
Q  273 aatatatgtgtaaaaactttaaacgacattcattttgaaac 313  Q
    ||||| ||||||||||  |||||||||||||||||||||||    
T  24245180 aatatgtgtgtaaaaatcttaaacgacattcattttgaaac 24245140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 5e-60; HSPs: 89)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 80 - 313
Target Start/End: Complemental strand, 37038921 - 37038692
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    ||||||||||||||||||| ||||||||||||||| |   ||||| ||||||||||||||| |||||||||||||||| |||||||  |||||  |||||    
T  37038921 ttgttttaaaatgaatgtcactttcagttttcaatgc---aataactttttcttttcaattatacccttcaattaatattatatacactactttcaaagt 37038825  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatat 279  Q
    |||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||| ||| |||||||||||||||| |       ||||| |    
T  37038824 attattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataacatctctctttcttttaattaatgta-tttcttaatatgt 37038726  T
Q  280 gtgtaaaaactttaaacgacattcattttgaaac 313  Q
    |||||||||  |||||||||| ||||||||||||    
T  37038725 gtgtaaaaatcttaaacgacactcattttgaaac 37038692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 80 - 241
Target Start/End: Complemental strand, 18719587 - 18719426
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    ||||||| ||||||||||| ||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||  || ||  |||||    
T  18719587 ttgttttgaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatatacactattttcaaagt 18719488  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataaca 241  Q
    |||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||    
T  18719487 attattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataaca 18719426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 80 - 265
Target Start/End: Original strand, 18579165 - 18579345
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||| ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||  |||||| |||||    
T  18579165 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattgcacccttcaattaatactatatacactacttccaaagt 18579264  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    || ||||||||||||| ||||||||||| |||||||||     |||||| ||||||||||||| |||| |||||| ||||||||||    
T  18579265 ataattttttctttaatgaaaaacaaaccaatagttga-----ataattcggtaaaataacatctcttattctttaaattaatgca 18579345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 40 - 265
Target Start/End: Original strand, 8539996 - 8540222
Alignment:
Q  40 ccctccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaat 139  Q
    |||| ||||||| ||||||||| ||||||||         ||||||||||||||||| |  ||||||||| || | | ||||||| |||||||||| |||    
T  8539996 cccttcgttttaaaatgagtgttgttttagtaaaaaaaaattgttttaaaatgaatgacattttcagtttccagtgcaataataactttttctttttaat 8540095  T
Q  140 tgtacccttcaattaatactatatacggtacttcaaaagtattatttt-ttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaata 238  Q
    |||||||||||||||||| ||| |||  |||||| ||| ||||||||| |||||||| |||||||||||||||||||||||| ||||||||| |||||||    
T  8540096 tgtacccttcaattaatattatttacactacttctaaaatattatttttttctttaatgaaaaacaaactaatagttgattaggataatttgataaaata 8540195  T
Q  239 acatttctttttcttttaattaatgca 265  Q
    |||| ||||||||||||||||||||||    
T  8540196 acatctctttttcttttaattaatgca 8540222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 80 - 312
Target Start/End: Complemental strand, 4658388 - 4658156
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| ||||||||||||  ||||| ||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||  |||||  |||||    
T  4658388 ttgtttcaaaatgaatgtctttttcatttttcaatgtaataataattttttcttttcaattgtacccttcaattaatactatatacactactttcaaagt 4658289  T
Q  180 atta--ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatat 277  Q
    ||||  |||||||||||| ||||||||||| |||||||||||| || |||||||||||||||||| | | ||| ||||||||||| ||       |||||    
T  4658288 attaatttttttctttaatgaaaaacaaaccaatagttgattaggacaatttggtaaaataacatctttctttattttaattaataca-ttttttaatat 4658190  T
Q  278 atgtgtaaaaactttaaacgacattcattttgaaa 312  Q
     ||||||||||| |||||||||| |||||||||||    
T  4658189 gtgtgtaaaaac-ttaaacgacactcattttgaaa 4658156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 38926604 - 38926762
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||| || || ||||||||||||||||||||||||||||||  |||  |||||| ||||    
T  38926604 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttctttttttcaattgtacccttcaattaatactatgttacactacttccaaag 38926703  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  38926704 tattattttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaaat 38926762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 80 - 262
Target Start/End: Complemental strand, 36685895 - 36685715
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    ||||||||||||||||||  |||||| |||  ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  |||||  ||| |    
T  36685895 ttgttttaaaatgaatgttactttcaatttcaaatacaataataattttttcttttcaattgtacccttcaattaatactataaacactactttgaaaat 36685796  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaat 262  Q
    |||||||||||||| | | ||||||||| |||| ||||||| ||||||||||||||||||||| ||||||| |||||||||||    
T  36685795 attattttttctttgatg-aaaacaaaccaataattgattaggataatttggtaaaataacatatcttttt-ttttaattaat 36685715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 441386 - 441228
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||||||| ||||| ||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||  |||   ||||| ||||    
T  441386 ttgtttcaaaatgaatgtcactttctgttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacaccacttccaaag 441287  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||||| ||| |||||||| ||||||||||||||||    
T  441286 tattattttttctttaatgaaaaacaaaccaatggttgattaggataatttggtaaaat 441228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 80 - 261
Target Start/End: Complemental strand, 12566135 - 12565954
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||| |||||||||| |||| | ||||||||||||| |||||||||||||| ||||||||||| |||||||  | |||| |||||    
T  12566135 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatttttttttttcaattgtaccattcaattaatattatatacactgcttccaaagt 12566036  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaa 261  Q
    || ||||| ||||||| ||||||||||  |||  |||| ||||||||||||||||||||| || ||| ||||||||||||||    
T  12566035 ataattttgtctttaatgaaaaacaaatcaatgattgagtaagataatttggtaaaataatatatctctttcttttaattaa 12565954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 87 - 313
Target Start/End: Original strand, 19164362 - 19164584
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattt 186  Q
    |||||||||| |  ||||| |||| ||| | ||||||| |||||||||| ||||||| ||||||||||||| |||||||  |||||  ||||||||||||    
T  19164362 aaaatgaatggcaatttcaatttttaatgcaataataactttttctttttaattgtatccttcaattaatattatatacactactttcaaagtattattt 19164461  T
Q  187 tttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaaa 286  Q
    ||||||||| ||| ||||||| |||||||||||   |||||||||||||||||||| ||| |||||||||||||||  |       ||||||||||||||    
T  19164462 tttctttaatgaataacaaaccaatagttgatt---ataatttggtaaaataacatatctctttcttttaattaat-aaatttcttaatatatgtgtaaa 19164557  T
Q  287 aactttaaacgacattcattttgaaac 313  Q
    ||| |||||| |||||| |||||||||    
T  19164558 aaccttaaacaacattcgttttgaaac 19164584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 4288866 - 4288708
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    |||||| ||||||||| || ||| ||||||  ||| | |||||||||||||||||||||||| ||| ||||||||||||||| | ||  |||||| ||||    
T  4288866 ttgtttcaaaatgaatatcacttacagtttctaatgcaataataattttttcttttcaattgcaccattcaattaatactatgttacactacttccaaag 4288767  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  4288766 tattattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaat 4288708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 12342091 - 12342249
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||||||| ||||| |||| |||| | ||||||| ||||||||||||||||||||||||||||||||||||  |||  |||||| |||     
T  12342091 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaaa 12342190  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||||  |||||||||||| ||||||||||||||||    
T  12342191 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 12342249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 29396835 - 29396677
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    |||||| |||||||||||| ||||| |||| |||| | ||||||| ||||||||||||||| |||||||||||||||| ||| | ||  |||||| ||||    
T  29396835 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaattatacccttcaattaatattatgttacactacttccaaag 29396736  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  29396735 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 29396677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 89 - 237
Target Start/End: Complemental strand, 45082046 - 45081897
Alignment:
Q  89 aatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaagtattatttt 187  Q
    |||||||||| |||||||||| |||| | |||||||||||||||||||||||||||||||||||||||| |||  |||  |||||| |||| ||||||||    
T  45082046 aatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatattatgttacactacttccaaagcattatttt 45081947  T
Q  188 ttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||| ||||||||||  |||||||||||| ||||||||||||||||    
T  45081946 ttctttaatgaaaaacaaaacaatagttgattaggataatttggtaaaat 45081897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 29808810 - 29808969
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    ||||||||||||||||||| ||||||||||||||| | || |||| |||||||||||||| |||||||||| |||||| |||  |||  |||||| ||||    
T  29808810 ttgttttaaaatgaatgtcactttcagttttcaatgcaatcataactttttcttttcaatcgtacccttcacttaatattatgttacactacttccaaag 29808909  T
Q  179 tatta-ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||| |||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  29808910 tattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 29808969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 32228166 - 32228008
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    ||||||||||||||||||| ||||  ||||| ||| | ||||||| |||||||||||| |||||||||||||||||||||||  |||  |||||  ||||    
T  32228166 ttgttttaaaatgaatgtcacttttggttttaaatgcaataataactttttcttttcagttgtacccttcaattaatactatgttacaatactttcaaag 32228067  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||| | |||||||||||| ||||||||||||||||    
T  32228066 tattattttttctttaatgaaaaacaacccaatagttgattaggataatttggtaaaat 32228008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 40 - 237
Target Start/End: Original strand, 4132982 - 4133178
Alignment:
Q  40 ccctccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaat 139  Q
    |||||||||| | |||||||||||||||||          |||||| |||||||||||| ||||| |||| |||| | ||||||| ||||||||||||||    
T  4132982 ccctccgtttcaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaat 4133081  T
Q  140 tgtacccttcaattaatactatat-acggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||||  ||||||||| | ||  |||||| |||||||||||||||| |||| ||||||||||| |||||||||||| ||||||||||||||||    
T  4133082 tgtacccttca--taatactatgttacactacttccaaagtattattttttccttaaagaaaaacaaaccaatagttgattaggataatttggtaaaat 4133178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 80 - 300
Target Start/End: Original strand, 11132548 - 11132766
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataa-ttttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaag 178  Q
    ||||||||| |||||| |   |||||||||  ||| | ||||||| |||||| |||||||||||| |||| ||||||||||||||||  |||||  |||     
T  11132548 ttgttttaacatgaattttattttcagtttcaaattcaataataacttttttattttcaattgtatcctttaattaatactatatacattactttcaaaa 11132647  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatata 278  Q
    ||||||||||||||||| ||||||||||| ||||||||||||  |||||||||||| |||  || ||||||||||||||||||||||       |||||     
T  11132648 tattattttttctttaatgaaaaacaaacaaatagttgattataataatttggtaatata--atatctttttcttttaattaatgca-tttcttaatatg 11132744  T
Q  279 tgtgtaaaaactttaaacgaca 300  Q
    || |||||||||||||||||||    
T  11132745 tgcgtaaaaactttaaacgaca 11132766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 33055956 - 33056070
Alignment:
Q  147 ttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttct 246  Q
    |||||||||||||||||||  |||||  || |||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||| |||    
T  33055956 ttcaattaatactatatacactactttcaatgtattattttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaaataacatctct 33056055  T
Q  247 ttttcttttaattaa 261  Q
     ||||||||||||||    
T  33056056 ctttcttttaattaa 33056070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 263
Target Start/End: Complemental strand, 33482384 - 33482199
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    ||||||||||||||||||| |||| | ||||||||   |||||| |||||||||||||| ||||| |||||||||||| |||||||  || ||| |||||    
T  33482384 ttgttttaaaatgaatgtcacttttatttttcaatgtaataatatttttttcttttcaactgtactcttcaattaataatatatacattatttcgaaagt 33482285  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataac--atttctttttcttttaattaatg 263  Q
    |||| |||||| ||||  |||||||||| || |||||| || ||||||||||||| |||||  || | ||||||||||||||||||    
T  33482284 attaatttttccttaataaaaaacaaaccaaaagttgaataggataatttggtaagataacatatatatttttcttttaattaatg 33482199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 137 - 262
Target Start/End: Original strand, 10195730 - 10195855
Alignment:
Q  137 aattgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaa 236  Q
    ||||||||||||||||||||  |||||||  |||||| ||| |||||||||||||||||  |||||||||  |||||||||||| |||||||||||||||    
T  10195730 aattgtacccttcaattaatgatatatacactacttccaaaatattattttttctttaataaaaaacaaaacaatagttgattaggataatttggtaaaa 10195829  T
Q  237 taacatttctttttcttttaattaat 262  Q
    |||||| ||| |||||||||||||||    
T  10195830 taacatctctctttcttttaattaat 10195855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 80 - 212
Target Start/End: Original strand, 29411694 - 29411826
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    ||||||||||||||||||| |||| |||||||||| | |||||||  ||||||||| ||||||||||||||||||||| |||||||  |||||  ||| |    
T  29411694 ttgttttaaaatgaatgtcacttttagttttcaatgcaataataaccttttctttttaattgtacccttcaattaatattatatacattactttcaaaat 29411793  T
Q  180 attattttttctttaaggaaaaacaaactaata 212  Q
    |||||||||||| ||||||||||||||| ||||    
T  29411794 attattttttctctaaggaaaaacaaaccaata 29411826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 6220559 - 6220401
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    ||||||||||||||||||| |||| ||||| |||| | ||||||| ||||||||||||| |||||| ||||||||||| |||  |||  |||||| |||     
T  6220559 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaactgtacctttcaattaatattatgttacactacttccaaat 6220460  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||| | ||||| ||||||||||| |||||||||||| ||||||||| ||||||    
T  6220459 tattattttctttttaatgaaaaacaaaccaatagttgattaggataatttgataaaat 6220401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 12394076 - 12393916
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat---atacggtacttcaaa 176  Q
    |||||| |||||||||||  ||||||||||  ||| | ||||||| ||||| |||| ||||||||||||||||||||| |||   ||||  || ||  ||    
T  12394076 ttgtttcaaaatgaatgttactttcagtttctaatgcaataataactttttatttttaattgtacccttcaattaatattatgttatacactattttcaa 12393977  T
Q  177 agtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  12393976 agtaatattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaat 12393916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 13561992 - 13562150
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| ||||| |||||| ||||||||||  ||| | ||||||| |||||||||||||||||||||||||||||||  |||  |||  |||||| ||||    
T  13561992 ttgtttcaaaataaatgtcactttcagtttctaatgcaataataactttttcttttcaattgtacccttcaattaatgttatgttacactacttccaaag 13562091  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||| ||||| ||||||||||| ||| |||||||| |||||||| |||||||    
T  13562092 tattattttttatttaatgaaaaacaaaccaatggttgattaggataatttagtaaaat 13562150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 16807672 - 16807514
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| ||||| |||||| |||| ||||| |||| | ||||||||||||||||||||||||||||||||||||||||| ||  |||   ||||| ||||    
T  16807672 ttgtttcaaaataaatgtcactttaagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatacaatggtacaccacttccaaag 16807573  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
     ||||| |||||||||| ||||||||||| ||||||||||||  |||||||| ||||||    
T  16807572 aattatattttctttaatgaaaaacaaacaaatagttgattagaataatttgataaaat 16807514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 16846953 - 16846795
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| ||||| |||||| |||| ||||| |||| | ||||||||||||||||||||||||||||||||||||||||| ||  |||   ||||| ||||    
T  16846953 ttgtttcaaaataaatgtcactttaagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatacaatggtacaccacttccaaag 16846854  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
     ||||| |||||||||| ||||||||||| ||||||||||||  |||||||| ||||||    
T  16846853 aattatattttctttaatgaaaaacaaacaaatagttgattagaataatttgataaaat 16846795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 25383639 - 25383482
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    ||||||||||||||||||   ||||||||| |||| | ||||||| |||||||||||||||||||| ||||||||||| ||| | ||  |||||  ||||    
T  25383639 ttgttttaaaatgaatgttattttcagtttccaatgcaataataactttttcttttcaattgtacc-ttcaattaatattatgttacactactttcaaag 25383541  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||| | ||||||||| ||||||||||  |||||||||||||||||||||||||||||    
T  25383540 tattactatttctttaatgaaaaacaaatcaatagttgattaagataatttggtaaaat 25383482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 100 - 237
Target Start/End: Original strand, 1423209 - 1423347
Alignment:
Q  100 ctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaagtattattttttctttaagga 198  Q
    |||||||||||||||   ||||||| || |||||||||||| |||||||||||||||| ||| | ||  |||||| ||| ||||||||||||||||| ||    
T  1423209 ctttcagttttcaatggaataataacttattcttttcaattatacccttcaattaatagtatgttacactacttccaaaatattattttttctttaatga 1423308  T
Q  199 aaaacaaactaatagttgattaagataatttggtaaaat 237  Q
     |||||||| |||||||||||| ||||||||||||||||    
T  1423309 gaaacaaaccaatagttgattaggataatttggtaaaat 1423347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 8789581 - 8789427
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||||||||||||| ||||||| ||||| |||||| ||||||| | |  |||||||||||||| |||||||||||||    |||  |||||| |||||    
T  8789581 ttgttttaaaatgaatatcgcttttagtttccaatacaataataactgt--cttttcaattgtactcttcaattaatacatgttacactacttccaaagt 8789484  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||| |||||| |||||| |||| |||||||||||| ||||||||||||||||    
T  8789483 attattttt-ctttaatgaaaaataaaccaatagttgattaggataatttggtaaaat 8789427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 85 - 263
Target Start/End: Complemental strand, 40608753 - 40608578
Alignment:
Q  85 ttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattat 184  Q
    |||||||||||||| |||||||||| |||| | ||||||| ||| ||||| ||||||||  ||| |||||||  |||||||  ||||   ||| ||||||    
T  40608753 ttaaaatgaatgtcactttcagttt-caatgcaataataactttctcttt-caattgtatactttaattaatcttatatacactactattaaaatattat 40608656  T
Q  185 tttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatg 263  Q
    ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||| |  | ||||||||||||||||||    
T  40608655 tttttctttaatgaaaaacaaacttatagttgattaggataatttggtaaaataatacat-tttttcttttaattaatg 40608578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 82 - 237
Target Start/End: Original strand, 30855105 - 30855261
Alignment:
Q  82 gttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaagta 180  Q
    |||| |||||||||||| || ||||||| |||| | ||||||||||| |||||||||||||||| || ||||||||||||  |||  |||||| |||  |    
T  30855105 gtttcaaaatgaatgtcactctcagtttccaatgcaataataatttt-tcttttcaattgtaccatttaattaatactatgttacactacttccaaaaca 30855203  T
Q  181 tta-ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||| |||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  30855204 ttatttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 30855261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 179 - 313
Target Start/End: Complemental strand, 11188305 - 11188172
Alignment:
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatata 278  Q
    ||||||||||||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||| ||| |||||||| |||||||||       |||||     
T  11188305 tattattttttctttaatgaaaaacaacccaatagttgattaggataacttggtaaaataacatctctctttcttttgattaatgca-tttattaatatg 11188207  T
Q  279 tgtgtaaaaactttaaacgacattcattttgaaac 313  Q
    ||||||| ||| |||||||||||||||||||||||    
T  11188206 tgtgtaagaaccttaaacgacattcattttgaaac 11188172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 177 - 265
Target Start/End: Complemental strand, 27964282 - 27964194
Alignment:
Q  177 agtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||| | | ||||||||||||||||||    
T  27964282 agtattattttttctttaatgaaaaacaaaccaatagttgattaaaataatttggtaaaataacatctttctttcttttaattaatgca 27964194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 83 - 237
Target Start/End: Original strand, 42004892 - 42005046
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaagtat 181  Q
    ||||||||||||||||  ||| | ||| |||| | ||||||||||||| |||||||||||||||||||||||||| |||  |||  |||||| |||||||    
T  42004892 ttttaaaatgaatgtcatttttaatttccaatgcaataataattttttattttcaattgtacccttcaattaatattatgttacactacttccaaagtat 42004991  T
Q  182 tattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||| ||| |||||  |||||||||| |||||||||||| ||||||||||| ||||    
T  42004992 tattgtttttttaa-taaaaacaaacaaatagttgattaggataatttggtgaaat 42005046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 8774054 - 8774208
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| ||||||||| ||||||| ||||| |||||| ||||||| | |  |||||||||||||| |||||||||||||    |||  |||||| |||||    
T  8774054 ttgtttaaaaatgaatatcgcttttagtttccaatacaataataactgt--cttttcaattgtactcttcaattaatacatgttacactacttccaaagt 8774151  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||| ||||||| |||||| |||| |||||||||||| ||||||||||||||||    
T  8774152 attatttt-tctttaatgaaaaataaaccaatagttgattaggataatttggtaaaat 8774208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 4469499 - 4469584
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatac 165  Q
    |||||||||||||||| || ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||| |||||||    
T  4469499 ttgttttaaaatgaatttcactttcagttttcaatacaataataactttttcttttcaattgtacccttaaattaatattatatac 4469584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 80 - 239
Target Start/End: Original strand, 43971502 - 43971646
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||| |||||||||| |||| | ||||||| ||||||||||||||||| |||||||||||               |||| |||||    
T  43971502 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtgcccttcaatta---------------cttctaaagt 43971586  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataa 239  Q
    |||||||||||||||| ||||||||||| |||||||||||| ||||||| ||||||||||    
T  43971587 attattttttctttaatgaaaaacaaaccaatagttgattaggataattcggtaaaataa 43971646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 43427442 - 43427334
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||| |||||||||| |||| | ||||||| |||||||||||||||||||||| ||||||||||| |  ||| |||||| |||||    
T  43427442 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactttgcacgctacttccaaagt 43427343  T
Q  180 attattttt 188  Q
    |||||||||    
T  43427342 attattttt 43427334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 118 - 234
Target Start/End: Complemental strand, 43480986 - 43480870
Alignment:
Q  118 ataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttga 217  Q
    ||||||| ||||||||||||||| |||| || |||||||||| |||||   ||||| ||||||||||||||||||||| ||||||||||| ||||||| |    
T  43480986 ataataactttttcttttcaattataccttttaattaatactttatacacaacttccaaagtattattttttctttaatgaaaaacaaaccaatagttta 43480887  T
Q  218 ttaagataatttggtaa 234  Q
    ||| |||||||| ||||    
T  43480886 ttaggataatttagtaa 43480870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 80 - 195
Target Start/End: Complemental strand, 7028967 - 7028852
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| ||||||||||||  ||||| ||| |||| | ||||| | ||||||||||||| ||||||||||||||||||||||||||  |||||  |||||    
T  7028967 ttgtttcaaaatgaatgtcattttcactttccaatgcaataatgactttttcttttcaaatgtacccttcaattaatactatatacactactttcaaagt 7028868  T
Q  180 attattttttctttaa 195  Q
    ||||||||||||||||    
T  7028867 attattttttctttaa 7028852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 27726511 - 27726412
Alignment:
Q  141 gtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataac 240  Q
    ||||||||||||||||| |||||||  |||||| ||| |||||||||||  |||| ||||||||||| |||||||||||| |||||||||||||||||||    
T  27726511 gtacccttcaattaatagtatatacattacttccaaattattatttttt--ttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataac 27726414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 45301763 - 45301871
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    ||||||||||||||||||| |||||||||| |||| | ||||||| ||||||||||||||||||||| |||||||||||| | |||  |||||  |||||    
T  45301763 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccatcaattaatactgtgtacactacttttaaagt 45301862  T
Q  180 attattttt 188  Q
    |||| ||||    
T  45301863 attactttt 45301871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 7644649 - 7644721
Alignment:
Q  85 ttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaata 157  Q
    |||||||||||||| |||||||| |||||||  ||||||| ||||||||||||||||||||||||||||||||    
T  7644649 ttaaaatgaatgtcactttcagtattcaatataataataactttttcttttcaattgtacccttcaattaata 7644721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 88 - 180
Target Start/End: Complemental strand, 27964517 - 27964425
Alignment:
Q  88 aaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagta 180  Q
    ||||||||||| |||| ||||| |||| | ||||||| ||||||||||||||||||||||||||||||||||||| ||  |||||| ||||||    
T  27964517 aaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatacacactacttccaaagta 27964425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 16463180 - 16463109
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatac 158  Q
    ||||| |||||| ||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||    
T  16463180 aaaataaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaatac 16463109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 133 - 265
Target Start/End: Original strand, 19469575 - 19469709
Alignment:
Q  133 tttcaattgtacccttcaattaatactatatacggtacttcaaaagtattatttt--ttctttaaggaaaaacaaactaatagttgattaagataatttg 230  Q
    ||||||||||||| ||||||||||| |||||||  || ||| |||||||||||||  |||||||| ||||||||||  |||| ||||||| ||||||||     
T  19469575 tttcaattgtaccattcaattaatattatatacattagttccaaagtattattttttttctttaatgaaaaacaaatcaataattgattacgataattta 19469674  T
Q  231 gtaaaataacatttctttttcttttaattaatgca 265  Q
     ||| ||||||  ||| ||||||||||||| ||||    
T  19469675 ataatataacacatctctttcttttaattattgca 19469709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 22620489 - 22620410
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatact 159  Q
    |||||| ||||||| ||||||||||||||| |||| | ||||||| |||||||||||||||||||||| |||||||||||    
T  22620489 ttgtttcaaaatgagtgtcgctttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatact 22620410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 93 - 237
Target Start/End: Original strand, 42753756 - 42753903
Alignment:
Q  93 aatgtcgctttcagttttcaatacgataataa-ttttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaagtattatt-tttt 189  Q
    |||||| ||||||||||||||| ||||||||| |||||| |||| |||||||  ||||||||||| |||| | ||  |||||| |||||| |||| ||||    
T  42753756 aatgtcactttcagttttcaatgcgataataacttttttatttttaattgtattcttcaattaatgctatgttacactacttccaaagtactattatttt 42753855  T
Q  190 ctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
     ||||| ||||||||||  |||||||||||| ||| ||||||||||||    
T  42753856 ttttaaagaaaaacaaatcaatagttgattaggatgatttggtaaaat 42753903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 4051859 - 4051750
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataatttttt-cttttcaattgtacccttcaattaatactatatacggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||||||| |||| | ||||||||||||| ||||||||||||||| | ||||||||||||| |||  |||||  ||||    
T  4051859 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatttttttcttttcaattgtaccttccaattaatactatgtacactactttcaaag 4051760  T
Q  179 tattattttt 188  Q
    ||||| ||||    
T  4051759 tattactttt 4051750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 80 - 240
Target Start/End: Complemental strand, 17695980 - 17695830
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| ||||||| |||| |||||||||| ||||  |||||||| |||||||||||||||||||||| ||||||||||| |  ||  |||||| |||||    
T  17695980 ttgtttcaaaatgagtgtcactttcagtttccaatgtgataataactttttcttttcaattgtaccctccaattaatactctgcacactacttccaaagt 17695881  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataac 240  Q
    |||| ||||          ||||| ||| ||||||| || |||||||||||||||||||||    
T  17695880 attactttt----------aaaactaaccaatagttaataaagataatttggtaaaataac 17695830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 36106554 - 36106400
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    ||||||||||||||||||| ||||   ||| |||| | ||  ||| ||||||||||||     ||||||||||||||||||| | ||  |||||| || |    
T  36106554 ttgttttaaaatgaatgtcacttttgttttccaatgcaatgctaactttttcttttcac----acccttcaattaatactatgttacactacttccaatg 36106459  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||| |||||  |||||||| | |||||||||||||||||||||||||||||    
T  36106458 tattattttttttttaataaaaaacaatccaatagttgattaagataatttggtaaaat 36106400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 145 - 313
Target Start/End: Complemental strand, 7872866 - 7872701
Alignment:
Q  145 ccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacattt 244  Q
    |||||||||||||||||| |   |||||  ||||||||||||||||||||| ||||||||||  |||||| ||| |  ||||||||||||||||  || |    
T  7872866 ccttcaattaatactataaatactactttcaaagtattattttttctttaatgaaaaacaaatcaatagtcgatcagaataatttggtaaaata--atat 7872769  T
Q  245 ctttttcttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacgacattcattttgaaac 313  Q
    || |||||||||||||||| |       ||||| |||||||||||  ||||| ||||||||||| ||||    
T  7872768 ctctttcttttaattaatg-aattttttaatatgtgtgtaaaaaccataaacaacattcattttaaaac 7872701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 80 - 156
Target Start/End: Complemental strand, 34546486 - 34546410
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaat 156  Q
    |||||| |||||||||||| |||||| ||| |||| | |||||||||||||||||| ||||||||||||||||||||    
T  34546486 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataattttttcttttaaattgtacccttcaattaat 34546410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 5717512 - 5717618
Alignment:
Q  81 tgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagta 180  Q
    |||||||||||||||||| |||||||||| |||| | ||||||| |||||||||| ||||||| ||| ||||||||||| || ||  |||||| ||||||    
T  5717512 tgttttaaaatgaatgtcactttcagtttccaatgcaataataaatttttctttttaattgta-cctccaattaatactctacacactacttccaaagta 5717610  T
Q  181 ttattttt 188  Q
    ||| ||||    
T  5717611 ttactttt 5717618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 80 - 195
Target Start/End: Complemental strand, 7042341 - 7042226
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| ||||||||||||  ||||| ||  |||| | ||||| | |||||||||| || ||||||||||||||||||||||||||  |||||  |||||    
T  7042341 ttgtttcaaaatgaatgtcattttcacttcccaatgcaataatgactttttctttttaaatgtacccttcaattaatactatatacactactttcaaagt 7042242  T
Q  180 attattttttctttaa 195  Q
    ||| ||||||||||||    
T  7042241 attcttttttctttaa 7042226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 101 - 313
Target Start/End: Complemental strand, 15083286 - 15083091
Alignment:
Q  101 tttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatta-ttttttctttaaggaa 199  Q
    ||||||||| |||| | |||||||  |||| ||||||||||||| |||||||||||||         |||||| ||||||||| |||||||||||| |||    
T  15083286 tttcagtttccaatgcaataataacattttattttcaattgtactcttcaattaatac---------tacttctaaagtattatttttttctttaatgaa 15083196  T
Q  200 aaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacgac 299  Q
        |||  |||| ||||||| ||||||||||||||||||||    | ||||||||||||||||||       |||||||||||||||||||||||  ||    
T  15083195 ----aaatcaataattgattatgataatttggtaaaataaca----tctttcttttaattaatgca-tttattaatatatgtgtaaaaactttaaataac 15083105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 28072565 - 28072676
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataa---ttttttcttttcaattgtacccttcaattaatactatatacggtacttcaaa 176  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||   |||||| |||||||| ||| ||| ||||||||||| |  ||  |||||| ||    
T  28072565 ttgttttaaaatgaatgtcactttcagttttcaatacaataataactttttttttttttcaatcgtatcctccaattaatactcttcacactacttccaa 28072664  T
Q  177 agtattattttt 188  Q
    ||||||| ||||    
T  28072665 agtattactttt 28072676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 80 - 157
Target Start/End: Original strand, 36177974 - 36178051
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaata 157  Q
    |||||| |||||||||||| ||||| |||| |||| | ||||||| ||||| ||||||||||||||||||||||||||    
T  36177974 ttgtttcaaaatgaatgtcactttccgtttccaatgcaataataacttttttttttcaattgtacccttcaattaata 36178051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 87 - 182
Target Start/End: Complemental strand, 11188640 - 11188545
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatt 182  Q
    |||||||||||| ||||||||||||||| | | ||||| || || |||||||||||| | |||||||||| ||||||||  |||||| ||||||||    
T  11188640 aaaatgaatgtcactttcagttttcaatgcaacaataacttatttttttcaattgtatcattcaattaatcctatatacactacttccaaagtatt 11188545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 14285943 - 14286014
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatac 158  Q
    ||||||||||||  ||||||||| |||||| ||||||| ||||| |||||||||||||||| ||||||||||    
T  14285943 aaaatgaatgtcattttcagtttccaatacaataataacttttttttttcaattgtaccctccaattaatac 14286014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 211 - 312
Target Start/End: Original strand, 29412113 - 29412213
Alignment:
Q  211 tagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacgacattcattttga 310  Q
    |||||||||| ||||||||||||||||||| | ||| || |||||||||||||||       |||||| |||||||||| |||||||||||| |||||||    
T  29412113 tagttgattaggataatttggtaaaataacttatctcttccttttaattaatgca-tttcttaatatacgtgtaaaaaccttaaacgacattaattttga 29412211  T
Q  311 aa 312  Q
    ||    
T  29412212 aa 29412213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 9391706 - 9391628
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatac 165  Q
    ||||||||||||  |||||||||| ||| | |||||||||||||||||||||||||  |||| |||||||| |||||||    
T  9391706 aaaatgaatgtcattttcagtttttaatgcaataataattttttcttttcaattgtgacctttaattaatattatatac 9391628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 19636602 - 19636664
Alignment:
Q  175 aaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||| ||||||||| ||||||    
T  19636602 aaagtattattttttctttaatgaaaaataaaccaatagttgattaggataatttgataaaat 19636664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 19835195 - 19835257
Alignment:
Q  175 aaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||| ||||||||| ||||||    
T  19835195 aaagtattattttttctttaatgaaaaataaaccaatagttgattaggataatttgataaaat 19835257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 188
Target Start/End: Original strand, 34455011 - 34455096
Alignment:
Q  103 tcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattttt 188  Q
    |||||||||||||| ||| ||||||||| |||||||||||| ||||||||||||  ||||||   |||||  ||||||||||||||    
T  34455011 tcagttttcaatacaatactaattttttattttcaattgtatccttcaattaatcatatatataatactttcaaagtattattttt 34455096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 200 - 313
Target Start/End: Complemental strand, 14833794 - 14833681
Alignment:
Q  200 aaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgt-aaaaactttaaacga 298  Q
    |||||||| |||||||||||  ||||||||||||||||||||||| | ||| |||||||| |||||       ||||||| ||| |||||| ||||||||    
T  14833794 aaacaaaccaatagttgattgggataatttggtaaaataacatttatatttattttaattgatgca-tttcttaatatatatgtaaaaaaccttaaacga 14833696  T
Q  299 cattcattttgaaac 313  Q
    ||||||||| |||||    
T  14833695 cattcatttcgaaac 14833681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 27986034 - 27986144
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataata--attttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaa 177  Q
    ||||||||||||||||||| ||||||||||||||||| |||| |   |||||| |||||||| ||| ||| ||||||||||| |  ||  |||||| |||    
T  27986034 ttgttttaaaatgaatgtcactttcagttttcaatacaataaaactttttttttttttcaatcgtatcctccaattaatactcttcacactacttccaaa 27986133  T
Q  178 gtattattttt 188  Q
    |||||| ||||    
T  27986134 gtattactttt 27986144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 258
Target Start/End: Original strand, 35799201 - 35799368
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| ||||| |||||| |||||||||| |||| | ||||||| ||||| |||||||||||||||| ||||||||| |||  ||  |||||  |||||    
T  35799201 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataacttttt-ttttcaattgtaccctccaattaatattatgcacactactttcaaagt 35799299  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaat 258  Q
    |||| ||||          ||||| ||| ||||||| || | |||||||||||||||||||  |||| |||||||||||    
T  35799300 attactttt----------aaaactaaccaatagttaataaggataatttggtaaaataaccattctctttcttttaat 35799368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 42743080 - 42743184
Alignment:
Q  133 tttcaattgtacccttcaattaatactatat-acggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttgg 231  Q
    ||||||||||| ||||||||||||| ||| | ||  |||||  |||||||| ||||||||||||  |||||||||  |||| ||||||| ||||||||||    
T  42743080 tttcaattgtatccttcaattaatattatgttacactactttcaaagtatt-ttttttctttaataaaaaacaaatcaataattgattaggataatttgg 42743178  T
Q  232 taaaat 237  Q
    ||||||    
T  42743179 taaaat 42743184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 7874795 - 7874720
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatact 159  Q
    ||||||||| |||||| ||||  |||| |||| | ||||||| |||||||||||||| |||||||||||||||||||    
T  7874795 ttttaaaattaatgtcactttt-gtttccaatgcaataataactttttcttttcaatcgtacccttcaattaatact 7874720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 34455793 - 34455873
Alignment:
Q  183 attttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatg 263  Q
    |||||||||||||  ||||  |||| | |||||||||| ||||||||||||||| ||||| ||| ||||||||||| ||||    
T  34455793 attttttctttaataaaaattaaaccagtagttgattaggataatttggtaaaagaacatctctctttcttttaatcaatg 34455873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 143
Target Start/End: Original strand, 16792481 - 16792544
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgta 143  Q
    |||||| |||||||||||| |||| ||||| |||| | ||||||| ||||||||||||||||||    
T  16792481 ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttcttttcaattgta 16792544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 143
Target Start/End: Original strand, 17703017 - 17703080
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgta 143  Q
    ||||||||||||||||||| |||||| |||||||| | ||||||| ||||||||| | ||||||    
T  17703017 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttctttccgattgta 17703080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 262
Target Start/End: Complemental strand, 9366209 - 9366147
Alignment:
Q  200 aaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaat 262  Q
    |||||||| ||||||| ||||||||||||||||||||||  ||  || |||||||||||||||    
T  9366209 aaacaaaccaatagtttattaagataatttggtaaaatatgataactctttcttttaattaat 9366147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 10195572 - 10195642
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttca 150  Q
    ||||||||||||||||||  |||| | |||||||| | |||||||  |||| |||||||||||||||||||    
T  10195572 ttgttttaaaatgaatgttacttttaattttcaatgcaataataacattttattttcaattgtacccttca 10195642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 27726592 - 27726542
Alignment:
Q  183 attttttctttaaggaaaaacaaactaatagttgattaagataatttggta 233  Q
    ||||||| ||||| ||||||||||||||||||| |||| ||||||||||||    
T  27726592 attttttttttaatgaaaaacaaactaatagttaattaggataatttggta 27726542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 237
Target Start/End: Complemental strand, 34546215 - 34546145
Alignment:
Q  168 tacttcaaaagtattatttttt-ctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||| |||| |||||||||| |||||| ||||||||||  |||||||||||| ||||||||| ||||||    
T  34546215 tacttccaaaggattatttttttctttaatgaaaaacaaatcaatagttgattaggataatttgataaaat 34546145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 157
Target Start/End: Original strand, 35046516 - 35046593
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaata 157  Q
    ||||||||| ||||||||| |||||| ||| |||| | ||||||| ||||  |||| |||| ||||||||||||||||    
T  35046516 ttgttttaagatgaatgtcactttcaatttccaatgcaataataacttttaatttttaattatacccttcaattaata 35046593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 777768 - 777851
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataa--ttttttcttttcaattgtacccttcaattaatactat 161  Q
    |||||||||||||||||||  ||||| |||  ||| | |||||||  |||||||| ||||| ||||||||||||| ||||||||    
T  777768 ttgttttaaaatgaatgtcattttcaatttctaatgcaataataaccttttttctgttcaaatgtacccttcaatcaatactat 777851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 313
Target Start/End: Complemental strand, 9391616 - 9391515
Alignment:
Q  212 agttgattaagataatttggtaaaataacatttc-tttttcttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacgacattcattttga 310  Q
    ||||||||| ||||||||||||||||||||| || ||||| ||||||||||| ||       ||||| ||||||||||  ||||| |||||| |||||||    
T  9391616 agttgattaggataatttggtaaaataacatatctttttttttttaattaataca-ttttttaatatgtgtgtaaaaatcttaaatgacatttattttga 9391518  T
Q  311 aac 313  Q
    |||    
T  9391517 aac 9391515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 43971966 - 43972010
Alignment:
Q  273 aatatatgtgtaaaaactttaaacgacattcattttgaaacagag 317  Q
    ||||| ||||||||||| ||| |||||||||||||||||||||||    
T  43971966 aatatgtgtgtaaaaaccttagacgacattcattttgaaacagag 43972010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 4469591 - 4469629
Alignment:
Q  227 tttggtaaaataacatttctttttcttttaattaatgca 265  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  4469591 tttggtaaaataacatctctctttcttttaattaatgca 4469629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 18717170 - 18717232
Alignment:
Q  175 aaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||| |||||| || ||||| ||||||||||| |||| ||||||| |||||||| |||||||    
T  18717170 aaagttttatttattttttaatgaaaaacaaaccaataattgattaggataattttgtaaaat 18717232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 45423618 - 45423724
Alignment:
Q  82 gttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtat 181  Q
    |||||||||||| |||   ||||||||| |||| | ||||||| ||||||||||||| | | ||||  ||||||||||||  ||  |||||| |||||||    
T  45423618 gttttaaaatgattgttattttcagtttccaatgcaataataactttttcttttcaaatattccctcgaattaatactatgcacactacttccaaagtat 45423717  T
Q  182 tattttt 188  Q
    || ||||    
T  45423718 tagtttt 45423724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 4840927 - 4840858
Alignment:
Q  380 taatacttcatccgtttcaaaatgactgtcgttttagcnnnnnnnnttgtttcaaaatgaatgtcacttt 449  Q
    ||||||| ||||||||||||||||| |||||||||||         ||||| ||||||||||||||||||    
T  4840927 taatactccatccgtttcaaaatgagtgtcgttttagaaaaaaaaattgttccaaaatgaatgtcacttt 4840858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 14833890 - 14833837
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttctt 133  Q
    ||||||||||||||||||| |||||| |||||||| | | ||||| ||||||||    
T  14833890 ttgttttaaaatgaatgtcactttcaattttcaatgcaacaataactttttctt 14833837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 18719288 - 18719259
Alignment:
Q  273 aatatatgtgtaaaaactttaaacgacatt 302  Q
    ||||||||||||||||||||||||||||||    
T  18719288 aatatatgtgtaaaaactttaaacgacatt 18719259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 313
Target Start/End: Complemental strand, 12565433 - 12565393
Alignment:
Q  273 aatatatgtgtaaaaactttaaacgacattcattttgaaac 313  Q
    ||||| ||||||||||| |||||||||||||||||| ||||    
T  12565433 aatatgtgtgtaaaaaccttaaacgacattcattttaaaac 12565393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 8e-59; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 100 - 317
Target Start/End: Complemental strand, 3988878 - 3988663
Alignment:
Q  100 ctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaa 199  Q
    |||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||||   || ||||||||||||||||||||||||| |||    
T  3988878 ctttcagtttccaatgcaataataattttttcttttcaattatacccttcaattaatactatatatactatttcaaaagtattattttttctttaatgaa 3988779  T
Q  200 aaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacgac 299  Q
    |||||||| |||||||||||| ||||||||||||||||||||| ||| |||||||||||| |||||       ||||| ||||||||||  |||||||||    
T  3988778 aaacaaacaaatagttgattatgataatttggtaaaataacatctctctttcttttaatt-atgca-tttctcaatatgtgtgtaaaaatcttaaacgac 3988681  T
Q  300 attcattttgaaacagag 317  Q
    ||||||||| ||||||||    
T  3988680 attcattttaaaacagag 3988663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 80 - 265
Target Start/End: Original strand, 9940646 - 9940831
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||||||||||| |||| ||||||||||||||| | ||||||| ||||  |||||||||||||||||||||||||| |||| ||  |||||| ||| |    
T  9940646 ttgttttaaaatgattgtcactttcagttttcaatgcaataataacttttctttttcaattgtacccttcaattaatattatacacactacttccaaaat 9940745  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    |||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||| ||| ||||||||| || |||||    
T  9940746 attattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataacatctctctttcttttagttgatgca 9940831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 87 - 263
Target Start/End: Complemental strand, 12459466 - 12459290
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattt 186  Q
    |||||||||||| ||||| ||||  ||||| ||||||  ||||||||||||||| ||||||||||||||||||||||||  |||||| |||||||| |||    
T  12459466 aaaatgaatgtcactttcggtttctaatacaataatatctttttcttttcaattatacccttcaattaatactatatacattacttccaaagtattgttt 12459367  T
Q  187 tttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatg 263  Q
    ||||||||| |||||||| || |||||||||||| |||||||||||||||||| || | | ||||||||||||||||    
T  12459366 tttctttaatgaaaaacagaccaatagttgattaggataatttggtaaaataatatctttctttcttttaattaatg 12459290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 81 - 314
Target Start/End: Complemental strand, 13504002 - 13503765
Alignment:
Q  81 tgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttctt--ttcaattgtacccttcaattaatactatata--cggtacttcaaa 176  Q
    ||||| |||||||||||| |||||||||| |||| | ||||||| ||||| ||  |||||||||||||||||||||||||||||||  |  |||||  ||    
T  13504002 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttttttatttcaattgtacccttcaattaatactatatatacactactttcaa 13503903  T
Q  177 agtattatttttt--ctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaa 274  Q
    |||||||||||||  |||||| ||||||||||| ||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||       ||    
T  13503902 agtattattttttttctttaatgaaaaacaaac-aatagtttattaggataatttggtaaaataacatttctctttcttttaattaatgca-tttcttaa 13503805  T
Q  275 tatatgtgtaaaaactttaaacgacattcattttgaaaca 314  Q
    ||| ||||||||||  |||||||||||| |||||||||||    
T  13503804 tatgtgtgtaaaaatcttaaacgacatttattttgaaaca 13503765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 234032 - 234190
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||||||| |||| ||||| |||| | ||||||| ||||||||||||||||||||||||||||||||||||  |||  |||||| ||||    
T  234032 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaag 234131  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  234132 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 234190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 80 - 265
Target Start/End: Original strand, 577059 - 577245
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||||||||| | | || ||||||||||||||| | ||||||| ||| || |||||||| |||||||||||||||| |||||||  |||||| ||| |    
T  577059 ttgttttaaaataactatcactttcagttttcaatgcaataataactttatcatttcaattatacccttcaattaatattatatacactacttccaaatt 577158  T
Q  180 attatttt-ttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    |||||||| |||||||| ||||||||||| |||||||||||| |||||||| |||||||||||||||| ||| ||||||||||||||    
T  577159 attatttttttctttaatgaaaaacaaaccaatagttgattaggataatttagtaaaataacatttctctttattttaattaatgca 577245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 86 - 317
Target Start/End: Complemental strand, 13011495 - 13011266
Alignment:
Q  86 taaaatgaatgtcgctttcagttttcaatacgataataattt--tttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatta 183  Q
    |||||| |||||| | ||||||||||||||| |||||||| |  ||| |||| |||| |||| |||||||||||||||||||  |||||  ||||||||     
T  13011495 taaaataaatgtcacgttcagttttcaatacaataataatatattttttttttaattttaccgttcaattaatactatatacactactttcaaagtatt- 13011397  T
Q  184 ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgt 283  Q
      |||||||||| |||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||       ||||| |||||    
T  13011396 --ttttctttaatgaaaaacaaaccgatagttgattaagataatttggtaaaataacatctctctttcttttaattaatgca-tttcttaatatgtgtgt 13011300  T
Q  284 aaaaactttaaacgacattcattttgaaacagag 317  Q
    |||||  ||||||||| |||||||||||||||||    
T  13011299 aaaaatcttaaacgacgttcattttgaaacagag 13011266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 24163869 - 24163711
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    ||||||||||||||||||| |||||||||| |||| | |||||||||||||||||||||||||||  |||||||||||||||  |||  |||||| ||||    
T  24163869 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacatttcaattaatactatgttacactacttccaaag 24163770  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||| ||||||||| |||||||||||||||||||||||  ||||||||| ||||||    
T  24163769 tattattatttctttaatgaaaaacaaactaatagttgatttggataatttgataaaat 24163711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 88 - 313
Target Start/End: Complemental strand, 17552392 - 17552169
Alignment:
Q  88 aaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattatttt 187  Q
    |||||||||||  ||||||||| |||| | |||||| ||||||  |||||||||||   || ||||||||||||||||  |||||| ||| |||||||||    
T  17552392 aaatgaatgtcattttcagtttccaatgcaataatattttttt--tttcaattgtaatttttaattaatactatatacactacttccaaaatattatttt 17552295  T
Q  188 tt-ctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaaa 286  Q
    || |||||| ||||||||||| ||| |||||||| |||||||||||||||| |||| ||| |||||||||||||||| |       ||| | ||||||||    
T  17552294 tttctttaatgaaaaacaaaccaattgttgattaggataatttggtaaaattacatctctctttcttttaattaatgta-ttttttaatctgtgtgtaaa 17552196  T
Q  287 aactttaaacgacattcattttgaaac 313  Q
    ||||| |||||||||||||||||||||    
T  17552195 aacttaaaacgacattcattttgaaac 17552169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 80 - 317
Target Start/End: Complemental strand, 31233780 - 31233540
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttc---aaa 176  Q
    ||||||||||||||||||| ||||||||||||| | | |||||||| ||||||||||||||||||||||||||| |||||| | |   ||||||   ||     
T  31233780 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 31233681  T
Q  177 agtattattttttctttaa-ggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaat 275  Q
    | ||||||||||||||||| | ||||| ||||  |||||||||| |||||| |||||| ||||  |||||| |||||||||||||||| |       |||    
T  31233680 attattattttttctttaatgaaaaaaaaaaccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgta-tttcttaat 31233582  T
Q  276 atatgtgtaaaaactttaaacgacattcattttgaaacagag 317  Q
    || ||||||||||| ||||| || ||||||||||||||||||    
T  31233581 atgtgtgtaaaaaccttaaaagatattcattttgaaacagag 31233540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 118 - 237
Target Start/End: Original strand, 1134961 - 1135081
Alignment:
Q  118 ataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttg 216  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||  |||||| ||| ||||||||||||||||| ||||||||||| ||||||||    
T  1134961 ataataactttttcttttcaattgtacccttcaattaatactatattacactacttccaaaatattattttttctttaaagaaaaacaaacaaatagttg 1135060  T
Q  217 attaagataatttggtaaaat 237  Q
    |||| ||||||||||||||||    
T  1135061 attaggataatttggtaaaat 1135081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 80 - 313
Target Start/End: Complemental strand, 18737245 - 18737010
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaag- 178  Q
    ||||||||||||||||||| |||||||||| |||| | ||||||| | ||||||||||||| ||||||| |||||||| |||||||  |||||  ||||     
T  18737245 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactctttcttttcaattataccctttaattaatattatatacactacttttaaagt 18737146  T
Q  179 --tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaata 276  Q
      ||||||||||||||||| |||||| |||  ||||||| |||| ||||||||| |||| || | | ||| ||||||||||||||||||       ||||    
T  18737145 actattattttttctttaatgaaaaataaaacaatagttaattaggataatttgataaattagcgtctctgtttcttttaattaatgca-ttttttaata 18737047  T
Q  277 tatgtgtaaaaactttaaacgacattcattttgaaac 313  Q
    | || ||||||||||||||||||||| ||||| ||||    
T  18737046 tgtgcgtaaaaactttaaacgacattaattttcaaac 18737010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 32193700 - 32193835
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||||||||| |||||| |||| |||||  ||| | ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||    
T  32193700 ttgttttaaaataaatgtcacttttagtttctaatgcaataataattttttcttttcaattgtacccttcaattaatactatatacactacttccaaagt 32193799  T
Q  180 attattttttctttaaggaaaaacaaactaatagtt 215  Q
    ||||| |||||||||| | ||||||||| |||||||    
T  32193800 attatcttttctttaatgtaaaacaaaccaatagtt 32193835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 29713554 - 29713403
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaagtattatt 185  Q
    ||||||||||||  |||| |||| |||| | ||||||| ||||||||||||||||||||||||||||||||||||  |||  |||||  |||||||||||    
T  29713554 aaaatgaatgtcattttccgtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactactttcaaagtattatt 29713455  T
Q  186 ttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||  ||||||||||||||||||||||| |||||||  |||||||    
T  29713454 ttttctttaataaaaaacaaactaatagttgattaggataattatgtaaaat 29713403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 147 - 265
Target Start/End: Complemental strand, 1502840 - 1502722
Alignment:
Q  147 ttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttct 246  Q
    |||||||||||||||||||  |||||| ||| ||||||||||| ||||| ||||||||||| ||||||| |||||||||||||||||||||||||| |||    
T  1502840 ttcaattaatactatatacactacttccaaaatattattttttatttaatgaaaaacaaaccaatagttaattaagataatttggtaaaataacatctct 1502741  T
Q  247 ttttcttttaattaatgca 265  Q
     ||||||||||| ||||||    
T  1502740 atttcttttaatcaatgca 1502722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 147 - 265
Target Start/End: Original strand, 17828348 - 17828466
Alignment:
Q  147 ttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttct 246  Q
    |||||||||||||||||||  | |||  ||||||||| ||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| | |    
T  17828348 ttcaattaatactatatacacttctttcaaagtattactttttctttaatgaaaaacaaaccaatggttgattaagataatttggtaaaataacatcttt 17828447  T
Q  247 ttttcttttaattaatgca 265  Q
     ||||||||||||||||||    
T  17828448 ctttcttttaattaatgca 17828466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 87 - 257
Target Start/End: Complemental strand, 12323032 - 12322861
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattt 186  Q
    |||||||||||| |||||||||| |||| | |||||| |||||   ||||||||| |||||||||||||||||||||||  |||||| |||||||| | |    
T  12323032 aaaatgaatgtcactttcagtttccaatgcaataatatttttta--tttcaattgcacccttcaattaatactatatacactacttccaaagtattgtgt 12322935  T
Q  187 tttctttaaggaaaaacaaacta---atagttgattaagataatttggtaaaataacatttctttttcttttaa 257  Q
    ||||||||| |||||| |||  |   |||||| |||| ||||||||||||||||||||| ||| ||||||||||    
T  12322934 tttctttaatgaaaaaaaaaaaatcaatagttaattaggataatttggtaaaataacatctctatttcttttaa 12322861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 31443601 - 31443442
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataa-ttttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaa 177  Q
    |||||| |||||||||||   ||||||||| |||| | ||||||| |||||| |||||||||||||| ||||||||||||||| | ||   ||||| |||    
T  31443601 ttgtttaaaaatgaatgttattttcagtttccaatgcaataataactttttttttttcaattgtacctttcaattaatactatgttacataacttccaaa 31443502  T
Q  178 gtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||||  |||||||||  |||||||||||| ||||||||||||||||    
T  31443501 gtattattttttctttaataaaaaacaaatcaatagttgattaggataatttggtaaaat 31443442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 168 - 312
Target Start/End: Complemental strand, 20226287 - 20226144
Alignment:
Q  168 tacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcann 267  Q
    |||||| || ||||||||| |||||||| ||||||||||  ||||||||||||  |||||||||||||||||||| ||| ||||||| ||||||||||      
T  20226287 tacttccaatgtattatttattctttaatgaaaaacaaatcaatagttgattagtataatttggtaaaataacatctctctttctttaaattaatgca-t 20226189  T
Q  268 nnnnnaatatatgtgtaaaaactttaaacgacattcattttgaaa 312  Q
         |||||||||| |||||| ||||||||||||||||||||||    
T  20226188 ttcttaatatatgtggaaaaaccttaaacgacattcattttgaaa 20226144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 168 - 312
Target Start/End: Complemental strand, 22120271 - 22120128
Alignment:
Q  168 tacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcann 267  Q
    |||||| || ||||||||| |||||||| ||||||||||  ||||||||||||  |||||||||||||||||||| ||| ||||||| ||||||||||      
T  22120271 tacttccaatgtattatttattctttaatgaaaaacaaatcaatagttgattagtataatttggtaaaataacatctctctttctttaaattaatgca-t 22120173  T
Q  268 nnnnnaatatatgtgtaaaaactttaaacgacattcattttgaaa 312  Q
         |||||||||| |||||| ||||||||||||||||||||||    
T  22120172 ttcttaatatatgtggaaaaaccttaaacgacattcattttgaaa 22120128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 23259480 - 23259322
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    |||||| ||||||||||||  ||||||||| |||| | | ||||| |||| |||||||||||||||||| |||||||| ||| | ||  |||||| ||||    
T  23259480 ttgtttcaaaatgaatgtcattttcagtttccaatgcaaaaataacttttacttttcaattgtacccttaaattaatattatgttacactacttccaaag 23259381  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||  ||||| ||||  |||||||||||| ||||||||||||||||    
T  23259380 tattattttttctttagtgaaaagcaaatcaatagttgattaggataatttggtaaaat 23259322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 87 - 237
Target Start/End: Original strand, 19674985 - 19675134
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaagtattatt 185  Q
    ||||||||||||  ||||||||| |||| | ||||||| |||||||||||||||||||| |||||||||||||||  | |  |||||| ||||  || ||    
T  19674985 aaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtaccattcaattaatactatgttgcactacttctaaag--ttttt 19675082  T
Q  186 ttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||| ||||||||||  |||||||||||| ||||||||||||||||    
T  19675083 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 19675134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 151 - 317
Target Start/End: Complemental strand, 21271485 - 21271321
Alignment:
Q  151 attaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttcttttt 250  Q
    ||||||| |||||||  |||||| ||| |||||||||| |||||| ||| ||||||  |||||||||||| |||| |||||||||||||||| ||| |||    
T  21271485 attaatattatatactctacttccaaattattattttt-ctttaatgaagaacaaatcaatagttgattaggatactttggtaaaataacatctctcttt 21271387  T
Q  251 cttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacgacattcattttgaaacagag 317  Q
     |||||| |||||||       ||||| ||||||||||| |||||||||||||||||||||||||||    
T  21271386 attttaaataatgca-tttcttaatatgtgtgtaaaaaccttaaacgacattcattttgaaacagag 21271321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 83 - 237
Target Start/End: Complemental strand, 24556080 - 24555924
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaagta- 180  Q
    ||||||||| ||||||  ||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||  |||  || ||  ||||||     
T  24556080 ttttaaaataaatgtcattttcagttttcaatgtaataataattttttcttttcaattgtactcttcaattaatactatgttacattattttcaaagtat 24555981  T
Q  181 ttattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    || |||||| ||||| ||||||||||  |||||||||||| ||||||||||||||||    
T  24555980 tttttttttttttaatgaaaaacaaatcaatagttgattatgataatttggtaaaat 24555924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 10520794 - 10520717
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaata 157  Q
    |||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10520794 ttgttttaaaataaatgtcactttcaattttcaatacaataataattttttcttttcaattgtacccttcaattaata 10520717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 147 - 313
Target Start/End: Complemental strand, 16128094 - 16127932
Alignment:
Q  147 ttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttct 246  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||||||| ||||| ||| | |||||| |  | |    
T  16128094 ttcaattaatactatatacactacttcaaaagtattattttttctttaatgaaaaacaaaccgatagttgattaggataaattgat-aaataaaa--tat 16127998  T
Q  247 ttttcttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacgacattcattttgaaac 313  Q
     ||||||||||||||||||       ||||||| |||||||||||||||| ||||| || |||||||    
T  16127997 atttcttttaattaatgca-tttcttaatatatatgtaaaaactttaaaccacatttatgttgaaac 16127932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 32619884 - 32619796
Alignment:
Q  175 aaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatg 263  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||||||||  ||| ||||||||||| ||||||||||||||||    
T  32619884 aaagtattattttttctttaatgaaaaacaaatcaatagttgattaagataatttaataatataacatttctctttcttttaattaatg 32619796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 83 - 265
Target Start/End: Original strand, 12588527 - 12588708
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacgg----tacttcaaaag 178  Q
    |||||||||||||||  |||||||||| |||| | ||||||| |||||  |||| ||| |||||||||||||||| ||||||       ||||||||||     
T  12588527 ttttaaaatgaatgttactttcagtttgcaatgcaataataacttttt--tttctattatacccttcaattaataatatatatatatattacttcaaaac 12588624  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    |||||||||||   |||  ||||| |||  |||||||| |||||||||||||||||||||| || ||| ||||||||||||||||||    
T  12588625 tattatttttt---taataaaaaataaatcaatagttggttaagataatttggtaaaataaaatctctctttcttttaattaatgca 12588708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 159
Target Start/End: Original strand, 29399904 - 29400023
Alignment:
Q  40 ccctccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaat 139  Q
    |||||||||| | |||||||||||||||||          |||||| |||||||||||| |||||||||| |||| | ||||||||||||||||||||||    
T  29399904 ccctccgtttcaaaatgagtgtcgttttagcaacaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaat 29400003  T
Q  140 tgtacccttcaattaatact 159  Q
    |||||||| |||||||||||    
T  29400004 tgtaccctccaattaatact 29400023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 179 - 308
Target Start/End: Original strand, 8957865 - 8957995
Alignment:
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnna-atat 277  Q
    |||||||||||||||||  |||||||||| |||||||||||| ||||||||||||| ||||||| ||| |||| ||||||||||| |       | || |    
T  8957865 tattattttttctttaataaaaaacaaaccaatagttgattaggataatttggtaagataacatatctctttcatttaattaatgtatttcttaatatgt 8957964  T
Q  278 atgtgtaaaaactttaaacgacattcatttt 308  Q
     ||||||||||| ||||||||||||||||||    
T  8957965 gtgtgtaaaaaccttaaacgacattcatttt 8957995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 179 - 308
Target Start/End: Complemental strand, 8961492 - 8961362
Alignment:
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnna-atat 277  Q
    |||||||||||||||||  |||||||||| |||||||||||| ||||||||||||| ||||||| ||| |||| ||||||||||| |       | || |    
T  8961492 tattattttttctttaataaaaaacaaaccaatagttgattaggataatttggtaagataacatatctctttcatttaattaatgtatttcttaatatgt 8961393  T
Q  278 atgtgtaaaaactttaaacgacattcatttt 308  Q
     ||||||||||| ||||||||||||||||||    
T  8961392 gtgtgtaaaaaccttaaacgacattcatttt 8961362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 109 - 232
Target Start/End: Complemental strand, 17267733 - 17267609
Alignment:
Q  109 ttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattatt-ttttctttaaggaaaaacaaac 207  Q
    |||||| | ||||||||||||||||||||| ||||||||| |||||||| |||||||  || ||  ||||||||||| |||||||| |  ||||||||||    
T  17267733 ttcaatgcaataataattttttcttttcaactgtaccctttaattaatattatatacactatttttaaagtattatttttttctttgataaaaaacaaac 17267634  T
Q  208 taatagttgattaagataatttggt 232  Q
    ||||| |||||||  ||||||||||    
T  17267633 taatatttgattagaataatttggt 17267609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 199 - 313
Target Start/End: Original strand, 32193927 - 32194039
Alignment:
Q  199 aaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacga 298  Q
    ||||||||| |||||||||||| ||||||||||||||||||||| ||| ||| ||||| ||||| ||       ||||||||||||||||| ||||||||    
T  32193927 aaaacaaaccaatagttgattaggataatttggtaaaataacatctctattt-ttttatttaatacatttctt-aatatatgtgtaaaaaccttaaacga 32194024  T
Q  299 cattcattttgaaac 313  Q
    |||||||||||||||    
T  32194025 cattcattttgaaac 32194039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 10540572 - 10540481
Alignment:
Q  139 ttgtacccttcaattaatactatat-acggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataattt 229  Q
    ||||| ||||||||||||||||||| ||  |||||| ||||||||||||||||||||| ||||||||||  |||||||||||| ||||||||    
T  10540572 ttgtatccttcaattaatactatattacactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattatgataattt 10540481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 12063657 - 12063558
Alignment:
Q  88 aaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaagtattattt 186  Q
    ||||||||||| |||||||||| |||| | ||||||||||||| |||||||||||||||||||||| |||||||  |||  |||||| ||||||||||||    
T  12063657 aaatgaatgtcactttcagtttccaatgcaataataatttttttttttcaattgtacccttcaattgatactatgttacactacttctaaagtattattt 12063558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 80 - 313
Target Start/End: Complemental strand, 4850650 - 4850428
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||| |||||| ||| |||| | ||||||| |||||||||||||||||||| | ||||||||||| |  ||  |||||| ||| |    
T  4850650 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattgtaccatccaattaatactctgcacactacttccaaaat 4850551  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatat 279  Q
    |||| ||||          ||||| ||| ||||||| || | |||||||||||||||||||  |||| ||||||||||| | ||||       ||||| |    
T  4850550 attactttt----------aaaactaaccaatagttaataaggataatttggtaaaataaccattctctttcttttaatcattgca-tttcttaatatgt 4850462  T
Q  280 gtgtaaaaactttaaacgacattcattttgaaac 313  Q
    ||||||| || | |||||||| ||||||||||||    
T  4850461 gtgtaaacacctaaaacgacactcattttgaaac 4850428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 8030647 - 8030714
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaatta 154  Q
    |||||||||||  |||||||||||||||   ||||||||||||||||||||| |||||||||||||||    
T  8030647 aaaatgaatgttactttcagttttcaatgtaataataattttttcttttcaactgtacccttcaatta 8030714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 262
Target Start/End: Original strand, 3847745 - 3847832
Alignment:
Q  175 aaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaat 262  Q
    |||| ||||||||||||||||  ||||| |||  ||||||||||||||||||||  ||||||||||||   | |||||||||||||||    
T  3847745 aaaggattattttttctttaattaaaaataaatcaatagttgattaagataattctgtaaaataacatccttctttcttttaattaat 3847832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 195
Target Start/End: Original strand, 19600419 - 19600534
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| ||||||||  || |||| ||||||| || | ||||||||||||||| |||| ||||| | || |||||||  || ||||| |||||| ||| |    
T  19600419 ttgtttcaaaatgaagatcactttaagttttctatgcaataataattttttctcttcatttgtatcttttaattaatgttagatacgctacttccaaaat 19600518  T
Q  180 attattttttctttaa 195  Q
    ||||||||||||||||    
T  19600519 attattttttctttaa 19600534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 10520449 - 10520387
Alignment:
Q  175 aaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||| ||||| || |||||| | |||| ||||||||||||||||||||||||    
T  10520449 aaagtattattttttatttaatgagaaacaatccaatatttgattaagataatttggtaaaat 10520387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 34513738 - 34513682
Alignment:
Q  100 ctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaat 156  Q
    |||||||||| |||| | ||||||| |||||||||||||||||| ||||||||||||    
T  34513738 ctttcagtttccaatgcaataataactttttcttttcaattgtatccttcaattaat 34513682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 13597979 - 13597932
Alignment:
Q  209 aatagttgattaagataatttggtaaaataacatttctttttctttta 256  Q
    ||||||| || |||||||||||||||||||||| |||| |||||||||    
T  13597979 aatagttaataaagataatttggtaaaataacaattctctttctttta 13597932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 159
Target Start/End: Original strand, 19689366 - 19689407
Alignment:
Q  118 ataataattttttcttttcaattgtacccttcaattaatact 159  Q
    ||||||| ||||||||||||| ||||| ||||||||||||||    
T  19689366 ataataactttttcttttcaactgtactcttcaattaatact 19689407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 21272257 - 21272180
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaata 157  Q
    |||||||||||||||| || |||||||||| ||||   |||||||  ||||||||| ||| ||||  |||||||||||    
T  21272257 ttgttttaaaatgaatatcactttcagtttccaatgtaataataacattttctttttaatcgtacatttcaattaata 21272180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 157
Target Start/End: Original strand, 32429282 - 32429359
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaata 157  Q
    |||||| |||| ||||||| |||| | ||| |||| | ||||||| |||||||||||||||||| | | |||||||||    
T  32429282 ttgtttcaaaacgaatgtcacttttaatttccaatgcaataataactttttcttttcaattgtatcatccaattaata 32429359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 5e-57; HSPs: 70)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 87 - 313
Target Start/End: Original strand, 11977593 - 11977818
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattt 186  Q
    |||| ||||||| |||||||||| |||||| ||||||| |||||||||||||||||| |||| |||||||| |||||||  |||||| ||||||||||||    
T  11977593 aaaacgaatgtcactttcagtttccaataccataataactttttcttttcaattgtatcctttaattaatattatatacactacttccaaagtattattt 11977692  T
Q  187 tttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaaa 286  Q
    ||||||||| ||| ||||||| |||||||||||| ||||||||||||||| ||||| ||| ||||||||||||||||||       ||||| ||||||||    
T  11977693 tttctttaatgaacaacaaaccaatagttgattaggataatttggtaaaacaacatctctctttcttttaattaatgca-tttcttaatatgtgtgtaaa 11977791  T
Q  287 aactttaaacgacattcattttgaaac 313  Q
    ||  |||||||||| ||||||||||||    
T  11977792 aagcttaaacgacactcattttgaaac 11977818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 83 - 263
Target Start/End: Original strand, 27797782 - 27797957
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatt 182  Q
    |||||||||||||||| |||||||||| |||| | ||||||| ||||||||||||||||||||||||| |||||||||||||   |||||| ||||||||    
T  27797782 ttttaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcagttaatactatata--ttacttccaaagtatt 27797879  T
Q  183 attttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatg 263  Q
    | ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  27797880 a-tttttctttaatgaaaaacaaaccaatagttgattaagataatttggtaaaataacatttc--tttcttttaattaatg 27797957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 86 - 313
Target Start/End: Original strand, 34534364 - 34534589
Alignment:
Q  86 taaaatgaatgtcgctttcagttttcaatacgataataatttt-ttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattat 184  Q
    ||||||||||||| ||||||  || |||| | ||||||||||| |||||||||||||||||||||||||||||||||  ||  |||||| ||| ||||||    
T  34534364 taaaatgaatgtcactttca--ttccaatgcaataataatttttttcttttcaattgtacccttcaattaatactatgcacactacttccaaaatattat 34534461  T
Q  185 tttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgta 284  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||||||||||||| || ||| ||||||||||||||||||       ||||| ||||||    
T  34534462 tttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataatatctctctttcttttaattaatgca-ttttttaatatgtgtgta 34534560  T
Q  285 aaaactttaaacgacattcattttgaaac 313  Q
    ||||| | |||| ||||||||||||||||    
T  34534561 aaaacctcaaacaacattcattttgaaac 34534589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 83 - 265
Target Start/End: Original strand, 36164888 - 36165070
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatt 182  Q
    ||||||||||||||||  ||||||||| |||| |  |||||| ||||||||||||||| ||||||||||||||||||||||||  |||||| ||| ||||    
T  36164888 ttttaaaatgaatgtcattttcagtttccaatgcagtaataactttttcttttcaattatacccttcaattaatactatatacattacttccaaaatatt 36164987  T
Q  183 attttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    |||||||||||||  |||||||||  |||||||||||| |||||||||||||||||||||||   ||||||||||||||||||    
T  36164988 attttttctttaataaaaaacaaatcaatagttgattaggataatttggtaaaataacatttacctttcttttaattaatgca 36165070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 83 - 237
Target Start/End: Complemental strand, 3306161 - 3306006
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaagtat 181  Q
    |||||||||||||||| |||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||| |  |||  |||||| |||||||    
T  3306161 ttttaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatactctgttacactacttccaaagtat 3306062  T
Q  182 tattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||||||| ||||||||||  |||||||||||||||||||||||||||||    
T  3306061 tattttttctttaatgaaaaacaaatcaatagttgattaagataatttggtaaaat 3306006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 34446182 - 34446024
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| ||||||||||||  |||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||  |||  |||||| ||||    
T  34446182 ttgtttcaaaatgaatgtcattttcagttttcaatacaataataacattttcttttcaattgtacccttcaattaatactatgttacactacttccaaag 34446083  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  34446082 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 34446024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 40 - 313
Target Start/End: Original strand, 38369831 - 38370102
Alignment:
Q  40 ccctccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaat 139  Q
    |||||||||||| ||||| ||||||||||||         |||||||||||||||| || |||| | ||| |||| | ||||||| |||||||||| |||    
T  38369831 ccctccgttttaaaatgaatgtcgttttagtaaaaaaaaattgttttaaaatgaatatcactttta-tttccaatgcaataataactttttcttttaaat 38369929  T
Q  140 tgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataa 239  Q
    ||||| |||||||||||| |||||||  |||||  |||||||||||||||  |||| ||||||| ||| |||||||||||| ||||||||||||||||||    
T  38369930 tgtactcttcaattaatattatatacactactttcaaagtattatttttttattaatgaaaaacgaacaaatagttgattaggataatttggtaaaataa 38370029  T
Q  240 catttctttttcttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacgacattcattttgaaac 313  Q
    ||| ||| ||| ||||||||||||||       ||||||||||||||||| |||||| ||| ||||||| ||||    
T  38370030 catatctctttattttaattaatgca-tttattaatatatgtgtaaaaaccttaaacaacaatcattttaaaac 38370102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 88 - 265
Target Start/End: Original strand, 843027 - 843201
Alignment:
Q  88 aaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattatttt 187  Q
    ||||||||||| |||||||||| |||| |   ||||| |||| ||||||||||||||| ||||||||||| | |||||  |||||||||||| |||||||    
T  843027 aaatgaatgtcactttcagtttgcaatgc---aataacttttccttttcaattgtaccattcaattaatattgtatacactacttcaaaagtgttatttt 843123  T
Q  188 ttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    |||||||| || |||||||| |||||||||||| ||||||||||||||||||||| |||  |||||||||||||||||    
T  843124 ttctttaatgagaaacaaaccaatagttgattaggataatttggtaaaataacatatctccttcttttaattaatgca 843201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 2729941 - 2729783
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||| ||| |||| | ||||||| |||||||||||||||||||||||||||||| ||||| | ||  |||||| ||||    
T  2729941 ttgtttcaaaatgaatgtcactttcactttccaatgcaataataactttttcttttcaattgtacccttcaattaaaactatgttacactacttccaaag 2729842  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  2729841 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 2729783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 39566181 - 39566339
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    ||||||||||||||||||| |||||||||| |||| | ||||||| |||||||||||||||||||||||||||||||| |||  |||  |||||| ||||    
T  39566181 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaataatatgttacactacttccaaag 39566280  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||| ||||||| ||||||||||  |||||||||||| ||||||||||||||||    
T  39566281 tattattttctctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 39566339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 83 - 313
Target Start/End: Original strand, 13974278 - 13974504
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatt 182  Q
    |||||||||||||||| |||| ||    |||| | ||||||||||| |||||||||||||||| |||||||| || |||||| | |||||| ||| ||||    
T  13974278 ttttaaaatgaatgtcacttttag----caatgcaataataattttatcttttcaattgtaccattcaattattattatatatgctacttccaaaatatt 13974373  T
Q  183 a-ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgt 281  Q
    | |||||||||||| | ||||||||| |||||||||||| ||||||||||||||||||||  ||| ||||||||||||||||||       ||||| |||    
T  13974374 acttttttctttaatggaaaacaaacaaatagttgattaggataatttggtaaaataacacctctctttcttttaattaatgca-tttcttaatatgtgt 13974472  T
Q  282 gtaaaaactttaaacgacattcattttgaaac 313  Q
    |||||||  |||||||||||||||||| ||||    
T  13974473 gtaaaaatcttaaacgacattcattttaaaac 13974504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 6518974 - 6519133
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||  |||  |||||  ||||    
T  6518974 ttgtttcaaaatgaatgtcgctttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactactttcaaag 6519073  T
Q  179 tatta-ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||| |||||||||||| ||||||||||  |||||||||||| ||||||||| ||||||    
T  6519074 tattatttttttctttaatgaaaaacaaatcaatagttgattaggataatttgataaaat 6519133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 26660753 - 26660910
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat---atacggtacttcaaa 176  Q
    ||||||||||||||||||| |||||| |||||||| | ||||||| ||||||||||||||||||||||||||||||||||||   ||||  |||||| |     
T  26660753 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttatac--tacttctag 26660850  T
Q  177 agtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  26660851 agtattatttt-tctttaatgaaaaacaaaccaatagttgattaagagaatttggtaaaat 26660910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 26932346 - 26932503
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat---atacggtacttcaaa 176  Q
    ||||||||||||||||||| |||||| |||||||| | ||||||| ||||||||||||||||||||||||||||||||||||   ||||  |||||| |     
T  26932346 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttatac--tacttctag 26932443  T
Q  177 agtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  26932444 agtattatttt-tctttaatgaaaaacaaaccaatagttgattaagagaatttggtaaaat 26932503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 81 - 313
Target Start/End: Complemental strand, 15167164 - 15166935
Alignment:
Q  81 tgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagta 180  Q
    ||||| |||||||||||| ||||||||||||||| | ||||||| ||||| ||||||||| ||| ||||||||| ||||||||||  |||||| ||| ||    
T  15167164 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt-ttttcaattttactcttcaattattactatatacactacttccaaaata 15167066  T
Q  181 ttattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatg 280  Q
    ||||||||||||||| ||||||  ||| ||||||||| || ||||||||||||||||||| | ||| |||| ||||||||||  |       ||||||||    
T  15167065 ttattttttctttaatgaaaaattaaccaatagttgactaggataatttggtaaaataacgtctctatttc-tttaattaatata-ttttttaatatatg 15166968  T
Q  281 tgtaaaaactttaaacgacattcattttgaaac 313  Q
    | |||||| ||||||||||||||||||| ||||    
T  15166967 tataaaaattttaaacgacattcattttaaaac 15166935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 118 - 313
Target Start/End: Complemental strand, 14162018 - 14161822
Alignment:
Q  118 ataataattttttcttttcaatt-gtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttg 216  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||  |||||| ||||||||||||||||||||| |||||| |||| | ||||||    
T  14162018 ataataattttttcttttcaatttgtaccattcaattaatactatatacactacttccaaagtattattttttctttaatgaaaaataaaccagtagttg 14161919  T
Q  217 attaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtg-taaaaactttaaacgacattcattttgaaac 313  Q
     ||| ||||||||| |||||||||||   | ||||||||||||||||||       ||||| ||||  |||||| |||||||||||||||||||||||    
T  14161918 tttatgataatttgataaaataacatccttctttcttttaattaatgca-tttcttaatatgtgtgcaaaaaaccttaaacgacattcattttgaaac 14161822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 83 - 237
Target Start/End: Complemental strand, 42662091 - 42661937
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaagtat 181  Q
    |||||||||||||||   ||| ||||||||||   ||||||||||||| |||||||||||||||||||||||||||||| | ||  |||||| |||||||    
T  42662091 ttttaaaatgaatgttatttttagttttcaatgtaataataatttttt-ttttcaattgtacccttcaattaatactatgttacactacttccaaagtat 42661993  T
Q  182 tattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  42661992 tattttttctttaataaaaaacaaactaatagttgattaggataatttggtaaaat 42661937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 42104218 - 42104060
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||||||| |||| | ||||||| ||||||||||||||| ||||||||||||||||||||  |||  |||||| || |    
T  42104218 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattttacccttcaattaatactatgttacactacttccaagg 42104119  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| |||||||||   |||||||||||| ||||||||||||||||    
T  42104118 tattattttttctttaatgaaaaacaagtcaatagttgattaggataatttggtaaaat 42104060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 118 - 313
Target Start/End: Complemental strand, 1309475 - 1309281
Alignment:
Q  118 ataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttga 217  Q
    |||||||||||||||||| || |||||| ||||||||||| |||||||  |||||  ||  ||||||||||||||||| || |||||||  ||| |||||    
T  1309475 ataataattttttctttttaagtgtacctttcaattaatattatatacactacttacaacatattattttttctttaatgataaacaaatcaattgttga 1309376  T
Q  218 ttaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacgacattcattttgaaac 313  Q
    ||| ||||||||| ||||||||||| ||| ||||||||||||||||||       ||||| ||||||||||| ||||| |||||||||||||||||    
T  1309375 ttatgataatttgataaaataacatatctatttcttttaattaatgca-tttcttaatatgtgtgtaaaaaccttaaatgacattcattttgaaac 1309281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 81 - 262
Target Start/End: Complemental strand, 38362291 - 38362110
Alignment:
Q  81 tgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagta 180  Q
    ||||| |||||||||||| |||||| |||||||| | ||||||| |||| |||||||||| ||||| | |||||||||| ||||   |||||  ||||||    
T  38362291 tgtttcaaaatgaatgtcactttcaattttcaatgcaataataacttttccttttcaattatacccataaattaatactttatatactacttttaaagta 38362192  T
Q  181 ttattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaat 262  Q
    |||||||||||||||  ||||| |||  ||||||| |||| |||||||| |||||||||||||||| |||||||||||||||    
T  38362191 ttattttttctttaataaaaaataaaacaatagttaattaggataatttagtaaaataacatttctctttcttttaattaat 38362110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 14620642 - 14620491
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaagtattatt 185  Q
    |||||||||||| |||||||||| |||| | ||||||| |||||||||||||||||||| ||||||||||| |||  |||  |||||| |||||||||||    
T  14620642 aaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacctttcaattaatattatgttacactacttccaaagtattatt 14620543  T
Q  186 ttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||| | ||||||||||| |||| ||||||||||||||||| ||||||    
T  14620542 ttttctttgatgaaaaacaaaccaataattgattaagataatttgataaaat 14620491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 175 - 312
Target Start/End: Original strand, 7736467 - 7736604
Alignment:
Q  175 aaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaa 274  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||| |||||| |||||||||||||| ||| ||| ||||||||||||||       ||    
T  7736467 aaagtattattttttctttaatgaaaaacgaactaatagttgattaggataatatggtaaaataacatatctctttattttaattaatgcatttttttaa 7736566  T
Q  275 tatatgtgtaaaaactttaaacgacattcattttgaaa 312  Q
    ||| ||||||||||  ||||||||||||||||||||||    
T  7736567 tatgtgtgtaaaaatcttaaacgacattcattttgaaa 7736604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 147 - 316
Target Start/End: Original strand, 21634177 - 21634344
Alignment:
Q  147 ttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttct 246  Q
    ||||||||||| |||||||  |||||| ||| ||||||||| ||||||| ||||||||||| |||| ||||||| |||| |||||||||||||||| |||    
T  21634177 ttcaattaatattatatacactacttccaaaatattatttt-tctttaatgaaaaacaaaccaataattgattatgatactttggtaaaataacatctct 21634275  T
Q  247 ttttcttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacgacattcattttgaaacaga 316  Q
     ||| ||||||||||||||       ||||| |||||||||||||||||||||||||||||| |||||||    
T  21634276 ctttattttaattaatgca-tttcttaatatgtgtgtaaaaactttaaacgacattcattttaaaacaga 21634344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 147 - 316
Target Start/End: Original strand, 21642424 - 21642591
Alignment:
Q  147 ttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttct 246  Q
    ||||||||||| |||||||  |||||| ||| ||||||||| ||||||| ||||||||||| |||| ||||||| |||| |||||||||||||||| |||    
T  21642424 ttcaattaatattatatacactacttccaaaatattatttt-tctttaatgaaaaacaaaccaataattgattatgatactttggtaaaataacatctct 21642522  T
Q  247 ttttcttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacgacattcattttgaaacaga 316  Q
     ||| ||||||||||||||       ||||| |||||||||||||||||||||||||||||| |||||||    
T  21642523 ctttattttaattaatgca-tttcttaatatgtgtgtaaaaactttaaacgacattcattttaaaacaga 21642591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 4424975 - 4425130
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    |||||||||||| ||| || ||||| ||||||||||  | ||||   ||||||||||||||||||| ||||||||||||||||| ||  |||||| ||||    
T  4424975 ttgttttaaaataaatatcactttcggttttcaataaaacaata---ttttcttttcaattgtacctttcaattaatactatattacactacttccaaag 4425071  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||||   |||| |||||||||||||||||||||||    
T  4425072 tattattttttctttaatgaaaaacaaatcgatagatgattaagataatttggtaaaat 4425130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 21375806 - 21375647
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||||||||| |||||| ||||||||||||||| | | |||  |||||| ||||||||||||||||||||||||||||||  |||  |||||  ||||    
T  21375806 ttgttttaaaataaatgtcactttcagttttcaatgcaaaaattttttttttttttcaattgtacccttcaattaatactatgttacactactttcaaag 21375707  T
Q  179 tatta-ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    || || |||||||||||| ||||||||||| ||||| |||||| ||||||||||||||||    
T  21375706 taatatttttttctttaatgaaaaacaaacaaataggtgattaggataatttggtaaaat 21375647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 80 - 250
Target Start/End: Original strand, 7721094 - 7721263
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| ||||||||| || ||||  ||||||||| | ||||||| ||||| |||||||||||| | |||||| |||| |||||||  |||||  |||||    
T  7721094 ttgtttcaaaatgaatatcactttatgttttcaatgcaataataacttttt-ttttcaattgtatcattcaatcaatattatatacattactttcaaagt 7721192  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttcttttt 250  Q
    |||||||||||||||| || |||||||| |||| ||||||| ||||||||| ||||||||||| |||||||    
T  7721193 attattttttctttaaagacaaacaaaccaataattgattaggataatttgttaaaataacatctcttttt 7721263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 118 - 237
Target Start/End: Complemental strand, 39335321 - 39335200
Alignment:
Q  118 ataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaagtattatttttt-ctttaaggaaaaacaaactaatagtt 215  Q
    ||||||| |||||||||||||||||||||||||||||||||||| | ||  |||||| ||||| ||||||||| |||||| ||||||||||| |||||||    
T  39335321 ataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaagtgttatttttttctttaatgaaaaacaaaccaatagtt 39335222  T
Q  216 gattaagataatttggtaaaat 237  Q
    ||||| ||||||||||||||||    
T  39335221 gattaggataatttggtaaaat 39335200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 101 - 238
Target Start/End: Original strand, 14005911 - 14006049
Alignment:
Q  101 tttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaagtattattttttctttaaggaa 199  Q
    ||||||||| |||| | ||||||| |||||||||| |||| || ||||||||||||||||| | ||  |||||| || |||||||||||||||||| |||    
T  14005911 tttcagtttccaatgcaataataactttttctttttaattttatccttcaattaatactatgttacactacttccaaggtattattttttctttaatgaa 14006010  T
Q  200 aaacaaactaatagttgattaagataatttggtaaaata 238  Q
    |||||||| |||| ||||||| |||||||||||||||||    
T  14006011 aaacaaaccaatatttgattaggataatttggtaaaata 14006049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 21319465 - 21319309
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||||||| ||||||| || |||| | ||||||| |||||||||||||||||||||||||||||||| |||  |||  |||| |||||     
T  21319465 ttgtttcaaaatgaatgtcactttcagcttccaatgcaataataactttttcttttcaattgtacccttcaattaatattatgttacactactccaaaa- 21319367  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    || ||| |||| ||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  21319366 ta-tatattttttttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 21319309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 39504720 - 39504881
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgat-aataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaa 177  Q
    ||||||||||||||||||| |||||||||| |||| | || ||||| |||||||||||||||||| |||| |||||||| ||| | ||  |||||| |||    
T  39504720 ttgttttaaaatgaatgtcactttcagtttccaatgcaattaataactttttcttttcaattgtatcctttaattaatattatgttacactacttccaaa 39504819  T
Q  178 gtattatttt--ttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
     |||||||||  |||||||  ||||||||||||||||||||||||  |||||||||||||||    
T  39504820 atattattttttttctttattgaaaaacaaactaatagttgattagaataatttggtaaaat 39504881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 80 - 192
Target Start/End: Original strand, 13761555 - 13761668
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||| |||||||| | ||||||| ||||||||||||||||||||||||||||||||||||  |||  |||||| ||||    
T  13761555 ttgtttcaaaatgaatgtcactttcacttttcaatgcaataataaatttttcttttcaattgtacccttcaattaatactatgttacactacttccaaag 13761654  T
Q  179 tattattttttctt 192  Q
    ||||||||||||||    
T  13761655 tattattttttctt 13761668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 134 - 263
Target Start/End: Original strand, 41645292 - 41645417
Alignment:
Q  134 ttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggta 233  Q
    ||||||||||||||||||||||||||||||||   ||| ||||||||||||||| ||||||| ||||||||||| ||| ||||||||| |||||||| ||    
T  41645292 ttcaattgtacccttcaattaatactatatac---actacaaaagtattatttt-tctttaatgaaaaacaaaccaatggttgattaaaataatttgata 41645387  T
Q  234 aaataacatttctttttcttttaattaatg 263  Q
    ||||| ||  ||| || |||||||||||||    
T  41645388 aaatatcaactctattacttttaattaatg 41645417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 8336557 - 8336404
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaagtatta-- 183  Q
    |||||||||||| ||| || |||||||| | ||||||| || || ||||||||||||| ||||||||||||||||  |||  |||||| ||| |||||      
T  8336557 aaaatgaatgtcacttccatttttcaatgcaataataacttctttttttcaattgtactcttcaattaatactatgttacactacttccaaaatattatt 8336458  T
Q  184 ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||  |||||||||| |||||||||||| ||||||||||||||||    
T  8336457 ttttttctttaataaaaaacaaaccaatagttgattaggataatttggtaaaat 8336404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 126 - 263
Target Start/End: Complemental strand, 28591735 - 28591596
Alignment:
Q  126 tttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaa---- 221  Q
    |||||||||||||||||||| || ||||||||||||||||  || ||  |||  |||||||||||||||| ||||||||||  |||||||||||||        
T  28591735 tttttcttttcaattgtaccttttaattaatactatatacactatttttaaaaaattattttttctttaatgaaaaacaaatcaatagttgattaattag 28591636  T
Q  222 gataatttggtaaaataacatttctttttcttttaattaatg 263  Q
    ||||||||||||||||||||  ||| ||||||||||||||||    
T  28591635 gataatttggtaaaataaca--tctctttcttttaattaatg 28591596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 4630866 - 4630971
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatt 182  Q
    ||||||||| |||||| ||||||||||||||||| ||||||| |||||||||||||||||| ||| ||||||||||| || ||  |||||| ||||||||    
T  4630866 ttttaaaataaatgtcactttcagttttcaatacaataataactttttcttttcaattgtatcctccaattaatactttacacactacttccaaagtatt 4630965  T
Q  183 attttt 188  Q
    | ||||    
T  4630966 actttt 4630971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 175 - 316
Target Start/End: Complemental strand, 4911175 - 4911029
Alignment:
Q  175 aaagtattatttttt-ctttaaggaaaaacaaactaatagttgattaagataatttggtaaa-----ataacatttctttttcttttaattaatgcannn 268  Q
    ||||||||||||||| |||||| ||||||||||| |||||||||||| ||||||||||||||     ||||||||| | |||||||||||||||| |       
T  4911175 aaagtattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataaaataacatttatctttcttttaattaatgta-tt 4911077  T
Q  269 nnnnaatatatgtgtaaaaactttaaacgacattcattttgaaacaga 316  Q
        ||||| ||||||||||| ||||| ||||||||||||||||||||    
T  4911076 tcttaatatgtgtgtaaaaaccttaaatgacattcattttgaaacaga 4911029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 7580024 - 7579947
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaata 157  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||    
T  7580024 ttgttttaaaatgaatgttactttcagttttcaatacaataataactttttcttttcaattgtactcttcaattaata 7579947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 87 - 258
Target Start/End: Complemental strand, 35766048 - 35765887
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattt 186  Q
    |||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||| | ||||||||||| || ||  || ||| ||||||||| ||    
T  35766048 aaaatgaatgtcactttcagttttcaatacaataataactttttcttttcaattgtaccgtccaattaatactctacacactaattctaaagtattactt 35765949  T
Q  187 tttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaat 258  Q
    ||          ||||| ||| ||||||| || | |||||||||||||||||||  |||| |||||||||||    
T  35765948 tt----------aaaactaaccaatagttaataaggataatttggtaaaataaccattctctttcttttaat 35765887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 83 - 237
Target Start/End: Complemental strand, 29807469 - 29807311
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataata--attttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaagt 179  Q
    |||||||||||||||  |||| |||||  ||| | ||||||  | |||||||||||||||||||| ||||||||||||||| | ||  |||||| ||| |    
T  29807469 ttttaaaatgaatgttactttgagtttctaatgcaataatataactttttcttttcaattgtaccattcaattaatactatgttacactacttccaaaat 29807370  T
Q  180 attatttttt-ctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||| |||||   |||||||||| |||||||||||| ||||||||||||||||    
T  29807369 attatttttttctttagtaaaaaacaaaccaatagttgattaggataatttggtaaaat 29807311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 80 - 263
Target Start/End: Original strand, 11195079 - 11195256
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||||||| ||||| ||  ||||||||||||||  || |||||| |||| |||| ||||||| | |||||||||||||||||||  || ||   || |    
T  11195079 ttgttttaaagtgaatatcaatttcagttttcaat--ga-aataatattttttttttaattgtatctttcaattaatactatatacattattttttaaat 11195175  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatg 263  Q
    ||| ||||||   ||| |||||||||||||||| || | |||||||||||||||||||||||| | | ||||||||||||||||    
T  11195176 attttttttt---taatgaaaaacaaactaataattaaataagataatttggtaaaataacatatttctttcttttaattaatg 11195256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 27600397 - 27600550
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactata-tacggtacttcaaaag 178  Q
    |||||||||||| ||| | ||||||||||| |||| | ||||||| ||||||||||||||| ||||||||||||||||||||| |||  || ||   |||    
T  27600397 ttgttttaaaataaatattgctttcagtttccaatgcaataataactttttcttttcaattatacccttcaattaatactatattacactattttcgaag 27600496  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||     |||| ||||| ||||||||||  |||||||||||| ||||||||||||||||    
T  27600497 ta-----ttttttttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 27600550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 159
Target Start/End: Original strand, 7316986 - 7317105
Alignment:
Q  40 ccctccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaat 139  Q
    |||||||||||| ||||||||||| |||||          |||||| |||||||||||| |||||||||| |||| | ||||||| ||||||||||||||    
T  7316986 ccctccgttttaaaatgagtgtcgctttagcaaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaat 7317085  T
Q  140 tgtacccttcaattaatact 159  Q
    |||||||| |||||||||||    
T  7317086 tgtaccctccaattaatact 7317105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 10345087 - 10344979
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||| |||||||||| |||| | ||||||| |||||||||||||||||||||| ||||||||||| |  ||  |||||| |||||    
T  10345087 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctgcacactacttccaaagt 10344988  T
Q  180 attattttt 188  Q
    |||| ||||    
T  10344987 attactttt 10344979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 24281098 - 24281262
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatt 182  Q
    ||||||||||||| || |||| |||||| ||| |  ||||||||||||| ||||||||||| | || ||||||||||||| ||  |||||  ||||||||    
T  24281098 ttttaaaatgaatatcacttttagtttttaatgcactaataattttttcatttcaattgta-catttaattaatactatacacaatactttcaaagtatt 24281196  T
Q  183 attttttctttaagg----aaaaacaaactaatagttgattaagataatttggtaaaataacattt 244  Q
    ||||||||||||| |    | ||||||| |||| ||||||||  |||||||| |||||||||||||    
T  24281197 attttttctttaacgagaaagaaacaaattaatggttgattagaataatttgataaaataacattt 24281262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 24381113 - 24380949
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatt 182  Q
    ||||||||||||| || |||| |||||| ||| |  ||||||||||||| ||||||||||| | || ||||||||||||| ||  |||||  ||||||||    
T  24381113 ttttaaaatgaatatcacttttagtttttaatgcactaataattttttcatttcaattgta-catttaattaatactatacacaatactttcaaagtatt 24381015  T
Q  183 attttttctttaagg----aaaaacaaactaatagttgattaagataatttggtaaaataacattt 244  Q
    ||||||||||||| |    | ||||||| |||| ||||||||  |||||||| |||||||||||||    
T  24381014 attttttctttaacgagaaagaaacaaattaatggttgattagaataatttgataaaataacattt 24380949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 43584532 - 43584452
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataa-ttttttcttttcaattgtacccttcaattaatact 159  Q
    |||||||||||||||||||| |||||||||||||| | ||||||| |||||||||||||||| |||||| |||||||||||    
T  43584532 ttgttttaaaatgaatgtcgttttcagttttcaatgcaataataacttttttcttttcaattataccctccaattaatact 43584452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 80 - 258
Target Start/End: Complemental strand, 3025086 - 3024918
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||| |||| ||||| |||| | ||||||| |||||||||||||||||||||| ||||||||||| |  ||  |||||| |||||    
T  3025086 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctgcacattacttccaaagt 3024987  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaat 258  Q
    |||| ||||          ||||| ||||||||||| |  | |||||||||||||||||||  |||| |||||||||||    
T  3024986 attactttt----------aaaactaactaatagttaaaaaggataatttggtaaaataaccattctctttcttttaat 3024918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 147 - 237
Target Start/End: Original strand, 39730011 - 39730102
Alignment:
Q  147 ttcaattaatactatat-acggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||| | ||  |||||| ||| ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  39730011 ttcaattaatactatgttacactacttccaaaatattattttttctttaatgaaaaacaaacgaatagttgattaggataatttggtaaaat 39730102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 87 - 165
Target Start/End: Original strand, 21195384 - 21195462
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatac 165  Q
    ||||||| ||||  ||| ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21195384 aaaatgattgtcaatttaagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatactatatac 21195462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 42978130 - 42978070
Alignment:
Q  177 agtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  42978130 agtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 42978070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 241
Target Start/End: Complemental strand, 7749049 - 7748891
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatt 182  Q
    ||||||||| |||  | |||||||||||||||   |||||||   | | |||| ||||||| | || ||||||||||||||||   ||||  ||||||||    
T  7749049 ttttaaaataaataccactttcagttttcaatgtaataataaccgtatatttttaattgtatcatttaattaatactatatacataactttcaaagtatt 7748950  T
Q  183 attttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataaca 241  Q
    ||||||||||||| ||||||||||| |||| || ||||  |||||||||||| ||||||    
T  7748949 attttttctttaatgaaaaacaaaccaataattaattagaataatttggtaatataaca 7748891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 80 - 211
Target Start/End: Complemental strand, 34209052 - 34208917
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaata---cgataataattttttcttttcaattgtacccttcaattaatactata-tacggtacttcaa 175  Q
    |||||| |||||||||||| |||||||||| |||||   | ||||||| ||||| ||||||||| |||||||||||||||| |||| |||  |||||| |    
T  34209052 ttgtttcaaaatgaatgtcactttcagtttccaataatgcaataataacttttttttttcaattatacccttcaattaatattatattacactacttcca 34208953  T
Q  176 aagtatta-ttttttctttaaggaaaaacaaactaat 211  Q
    || ||||| |||||||||||| | |||||||||||||    
T  34208952 aaatattatttttttctttaatg-aaaacaaactaat 34208917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 118 - 237
Target Start/End: Complemental strand, 34972759 - 34972647
Alignment:
Q  118 ataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttga 217  Q
    ||||||||||||| |||| ||||||||| |||||| |||| ||| |       ||| ||||||||||| |||||||||  ||||||||| ||||||||||    
T  34972759 ataataattttttatttttaattgtaccattcaatgaatattatgt-------ttccaaagtattattctttctttaataaaaaacaaattaatagttga 34972667  T
Q  218 ttaagataatttggtaaaat 237  Q
    ||| ||||||||||||||||    
T  34972666 ttaggataatttggtaaaat 34972647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 149 - 315
Target Start/End: Complemental strand, 27557901 - 27557741
Alignment:
Q  149 caattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttcttt 248  Q
    |||||||||||||||||  |||||  ||| |||||||||||    || |||||| |||| |||||| |||| |||||||||| ||||||||||| ||||     
T  27557901 caattaatactatatacactactttcaaaatattatttttt----aatgaaaaataaac-aatagtcgattcagataatttgataaaataacatctctta 27557807  T
Q  249 ttcttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacgacattcattttgaaacag 315  Q
    ||||||||||||||| |       ||||| ||| ||||| |||||||||||||| ||||| ||||||    
T  27557806 ttcttttaattaatgta-tttcttaatatgtgtataaaatctttaaacgacatttattttaaaacag 27557741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 24280991 - 24281055
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtac 144  Q
    |||||| |||||||||||| |||| ||||| |||| | |||||||||||||||||||||||||||    
T  24280991 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataattttttcttttcaattgtac 24281055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 24381221 - 24381157
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtac 144  Q
    |||||| |||||||||||| |||| ||||| |||| | |||||||||||||||||||||||||||    
T  24381221 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataattttttcttttcaattgtac 24381157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 9066578 - 9066501
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaata 157  Q
    |||||| |||||||||||  ||||||||||||||| | |||||||  ||||||||||| ||||| | |||||||||||    
T  9066578 ttgtttcaaaatgaatgttactttcagttttcaatgcaataataaaattttcttttcatttgtagcattcaattaata 9066501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 184 - 237
Target Start/End: Original strand, 13761823 - 13761876
Alignment:
Q  184 ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||||| |||||| |||| ||||||||||||||||||||| |||||||    
T  13761823 ttttttctttaatgaaaaataaaccaatagttgattaagataattttgtaaaat 13761876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 7579643 - 7579579
Alignment:
Q  185 tttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttt 249  Q
    ||||||||||| ||||||||||  |||||||||||| |||||||||  |||||||||||| ||||    
T  7579643 tttttctttaatgaaaaacaaatcaatagttgattaggataatttgaaaaaataacatttttttt 7579579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 25362955 - 25362847
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||  ||||||||||  ||| | ||||| | ||||||||||||||| |||||| ||||||||||| |  ||  |||||| |||||    
T  25362955 ttgtttcaaaatgaatgttactttcagtttcgaatgcaataatgactttttcttttcaattttaccctccaattaatactctgcacactacttccaaagt 25362856  T
Q  180 attattttt 188  Q
    |||| ||||    
T  25362855 attactttt 25362847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 36073777 - 36073708
Alignment:
Q  88 aaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaata 157  Q
    |||||||||||  ||| | |||||||| | ||||||| |||||||||||||||||| | |||||||||||    
T  36073777 aaatgaatgtcattttaaattttcaatgcaataataactttttcttttcaattgtatcattcaattaata 36073708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 164
Target Start/End: Complemental strand, 4911305 - 4911221
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatata 164  Q
    |||||| ||||| |||||| |||| ||||| ||||   ||||||  ||||||||||||| ||||||||||||| |||| ||||||    
T  4911305 ttgtttcaaaataaatgtcacttttagtttccaatgtaataatacctttttcttttcaactgtacccttcaatcaatattatata 4911221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 32158589 - 32158637
Alignment:
Q  111 caatacgataataattttttcttttcaattgtacccttcaattaatact 159  Q
    |||||| ||||||| ||||| |||||||||||||||| |||||||||||    
T  32158589 caatacaataataacttttttttttcaattgtaccctccaattaatact 32158637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 891154 - 891091
Alignment:
Q  95 tgtcgctttcagttttcaatacgataataattttttctttt-caattgtacccttcaattaata 157  Q
    |||| |||||| ||||||||   |||||||||||||||||| |||||||||| |||||||||||    
T  891154 tgtcactttcacttttcaatgtaataataattttttctttttcaattgtaccattcaattaata 891091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 258
Target Start/End: Original strand, 32158649 - 32158708
Alignment:
Q  199 aaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaat 258  Q
    ||||| ||| ||||||| || |||||||||||||||||||||  |||| |||||||||||    
T  32158649 aaaactaaccaatagttaataaagataatttggtaaaataaccattctctttcttttaat 32158708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 40776728 - 40776653
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataa-ttttttcttttcaattgtacccttcaattaata 157  Q
    ||||||| |||||||| |||||| ||||||||   ||||||| |||||| ||| |||||||||||| |||||||||    
T  40776728 ttttaaattgaatgtcactttcatttttcaatgtaataataacttttttatttccaattgtaccctccaattaata 40776653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 417
Target Start/End: Original strand, 29044696 - 29044734
Alignment:
Q  379 ataatacttcatccgtttcaaaatgactgtcgttttagc 417  Q
    |||||||| ||||||||||||||||||||||| ||||||    
T  29044696 ataatactccatccgtttcaaaatgactgtcgctttagc 29044734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 417
Target Start/End: Original strand, 38982066 - 38982100
Alignment:
Q  383 tacttcatccgtttcaaaatgactgtcgttttagc 417  Q
    |||||||||||||||||||||| ||||||||||||    
T  38982066 tacttcatccgtttcaaaatgaatgtcgttttagc 38982100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 7736226 - 7736270
Alignment:
Q  119 taataattttttcttttcaattgtacccttcaattaatactatat 163  Q
    |||||| ||||||||||||||| ||||||| |||||||| |||||    
T  7736226 taataactttttcttttcaattctaccctttaattaatattatat 7736270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 5e-57; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 80 - 313
Target Start/End: Original strand, 30315307 - 30315540
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtactt-caaaag 178  Q
    |||||| |||||||||||| ||||| |||| |||| | | ||||| |||||||||| |||| ||||||||||||||||||||||||  ||||| ||||||    
T  30315307 ttgtttcaaaatgaatgtcactttccgtttccaatgcaagaataactttttcttttgaattatacccttcaattaatactatatacactactttcaaaag 30315406  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatata 278  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||||       |||||     
T  30315407 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataacatctctctttctcttaattaatgca-tttcttaatatg 30315505  T
Q  279 tgtgtaaaaactttaaacgacattcattttgaaac 313  Q
    ||||||| | | |||||||||||||||||||||||    
T  30315506 tgtgtaacagccttaaacgacattcattttgaaac 30315540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 40 - 313
Target Start/End: Complemental strand, 36844934 - 36844662
Alignment:
Q  40 ccctccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaat 139  Q
    |||||||||||| ||||||||||||||||           |||||| ||||  |||||| ||||||||||||||| | ||||||||||||||||||||||    
T  36844934 ccctccgttttaaaatgagtgtcgttttaacaaaaaataattgtttcaaaaccaatgtcactttcagttttcaatgcaataataattttttcttttcaat 36844835  T
Q  140 tgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataa 239  Q
    |||| | ||||||||||| |||||||  |||||| |||||||||| |||||||||| ||||||| ||  |||||||||||| ||||||||||||||||||    
T  36844834 tgtatcattcaattaatattatatacactacttccaaagtattatgttttctttaatgaaaaactaatcaatagttgattaggataatttggtaaaataa 36844735  T
Q  240 catttctttttcttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacgacattcattttgaaac 313  Q
     || ||| ||||| ||||||||||||       ||||| ||| ||||||| |||||||||||||||||||||||    
T  36844734 tatctctctttctgttaattaatgca-tttcttaatatgtgtctaaaaaccttaaacgacattcattttgaaac 36844662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 83 - 265
Target Start/End: Complemental strand, 9189584 - 9189402
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatt 182  Q
    |||||||||||||||| |||||||||||||||   ||||||| ||||||||||||| | || | |||||||||||||||||||  |||||| ||| ||||    
T  9189584 ttttaaaatgaatgtcactttcagttttcaatgaaataataactttttcttttcaaatatatcattcaattaatactatatacattacttccaaaatatt 9189485  T
Q  183 attttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    |||||||||||||  |||||||||| |||||||||||| ||| ||||||||||||||||| ||||||| ||||||||||||||    
T  9189484 attttttctttaataaaaaacaaaccaatagttgattacgatgatttggtaaaataacatctctttttattttaattaatgca 9189402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 80 - 263
Target Start/End: Complemental strand, 30934958 - 30934778
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||||||||||||||||    ||||||| |||| | ||||||||||||||||||||||||||||| ||||||||||||||||||  |||||| |||||    
T  30934958 ttgttttaaaatgaatgtca---tcagtttccaatgcaataataattttttcttttcaattgtacccctcaattaatactatatacactacttctaaagt 30934862  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatg 263  Q
    |||||||| ||||||| ||||||||||| |||| ||||||| ||||||||| ||||||||||| ||| |||||||||| |||||    
T  30934861 attattttatctttaatgaaaaacaaaccaatatttgattatgataatttgataaaataacatctctctttcttttaactaatg 30934778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 43 - 265
Target Start/End: Original strand, 19373547 - 19373769
Alignment:
Q  43 tccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgt 142  Q
    ||||||||| |||||||||| |||||||         |||||| ||||||| |||| |||||| ||||||||   ||||||| ||||| |||||||||||    
T  19373547 tccgttttaaaatgagtgtcattttagttaaaaaaaattgtttcaaaatgactgtcactttcaattttcaatgaaataataactttttattttcaattgt 19373646  T
Q  143 acccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacat 242  Q
    |||||||||||||||  ||||||  |||||| ||||| ||||||||||||||| ||||||||||| |||||||||||| || ||||||||||||||||||    
T  19373647 acccttcaattaatatcatatacactacttccaaagttttattttttctttaatgaaaaacaaaccaatagttgattaggagaatttggtaaaataacat 19373746  T
Q  243 ttctttttcttttaattaatgca 265  Q
     ||| |||||||||| |||||||    
T  19373747 ctctctttcttttaactaatgca 19373769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 81 - 314
Target Start/End: Original strand, 38140949 - 38141181
Alignment:
Q  81 tgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagta 180  Q
    ||||| |||||||||||| |||||||||| |||| | |||||||  |||| ||||  ||||| ||||||||||||||||||||||  |||||| ||| ||    
T  38140949 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttttttttcattgtgcccttcaattaatactatatacactacttccaaaata 38141048  T
Q  181 ttattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatg 280  Q
    | ||||||||||||| ||||||||||| |||| |||||||  |||||||||||||||||||| ||| ||||||||||||||| ||       |||||||     
T  38141049 taattttttctttaatgaaaaacaaaccaataattgattagaataatttggtaaaataacatctctatttcttttaattaataca-ttttttaatatata 38141147  T
Q  281 tgtaaaaactttaaacgacattcattttgaaaca 314  Q
    ||||||||||||| |||||||||||||| |||||    
T  38141148 tgtaaaaactttatacgacattcattttaaaaca 38141181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 80 - 313
Target Start/End: Original strand, 42071983 - 42072215
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    ||||||||||||| |||||  ||| ||||| |||| | ||||||| ||||||||||||| |||||||||||||||||| |||||||  |||||| |||||    
T  42071983 ttgttttaaaatggatgtcatttttagtttccaatgcaataataactttttcttttcaactgtacccttcaattaatattatatacattacttctaaagt 42072082  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatat 279  Q
    ||||| |||||||||| | ||||||||  |||||||||||| |||||||| |||||||||||| ||| |||||||||||||||  |       ||||| |    
T  42072083 attatgttttctttaatggaaaacaaatcaatagttgattatgataatttagtaaaataacatatctctttcttttaattaatata-tttcttaatatgt 42072181  T
Q  280 gtgtaaaaactttaaacgacattcattttgaaac 313  Q
    |||||||||| ||| |||||||||||||||||||    
T  42072182 gtgtaaaaacattatacgacattcattttgaaac 42072215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 38016373 - 38016530
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||||||| |||| | ||||||| |||||||||||||||||||| ||||||||||||||| | ||  |||||| ||||    
T  38016373 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacc-ttcaattaatactatgttacactacttccaaag 38016471  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  38016472 tattattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaat 38016530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 41 - 237
Target Start/End: Complemental strand, 45213911 - 45213716
Alignment:
Q  41 cctccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaatt 140  Q
    ||||||||||| ||||||||||||||||||         ||||||||||||||||||| ||||||||||  ||| | ||||||| |||||||||||||||    
T  45213911 cctccgttttaaaatgagtgtcgttttagttaaaaaa--ttgttttaaaatgaatgtcactttcagtttctaatgcaataataactttttcttttcaatt 45213814  T
Q  141 gtacccttcaattaatactata-tacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||||||||||||||| |||  |||||  ||||||||||||||||||||| ||||| ||||| ||||||||||||  |||||||||||||||    
T  45213813 gtacccttcaattaatactatattacactactttcaaagtattattttttctttaatgaaaagcaaaccaatagttgattagaataatttggtaaaat 45213716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 80 - 265
Target Start/End: Original strand, 48903284 - 48903469
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| ||||||||||||  ||||||||| |||| | ||||||| |||||||||||||||||||||| |||||||||||||||||  || ||  | |||    
T  48903284 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactatatacactaatttcatagt 48903383  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    ||||||||||||||||  |||||||||  ||||||||||||| |||||||| |||||||| || ||| ||||||||||||||||||    
T  48903384 attattttttctttaattaaaaacaaagcaatagttgattaaaataatttgataaaataatatatctctttcttttaattaatgca 48903469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 87 - 263
Target Start/End: Original strand, 40487833 - 40488009
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattt 186  Q
    |||||||||||| ||||   ||| |||| | ||||||| |||||||||||||||||||| |||||||||||||||||||  |||||| ||||||||||||    
T  40487833 aaaatgaatgtcacttttgatttccaatgcaataataactttttcttttcaattgtacctttcaattaatactatatacactacttctaaagtattattt 40487932  T
Q  187 tttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatg 263  Q
    ||||||||  |||||||||| |||||||||||||  |||||||| ||||||||||| |   ||||||||||||||||    
T  40487933 tttctttatcgaaaaacaaattaatagttgattataataatttgataaaataacatcttcctttcttttaattaatg 40488009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 87 - 237
Target Start/End: Original strand, 30431125 - 30431276
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactata-tacggtacttcaaaagtattatt 185  Q
    |||||||||||| ||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||| |||  |||||| |||||||||||    
T  30431125 aaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattgtaaccttcaattaatattatattacactacttccaaagtattatt 30431224  T
Q  186 ttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||| ||| |||||||||   |||||||||||| ||||||||||||||||    
T  30431225 ttttctctaatgaaaaacaagtcaatagttgattaggataatttggtaaaat 30431276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 33194183 - 33194025
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    ||||||||||||||||||| |||||||||| |||| | || |||| ||||| |||| ||||||||||||||||||||| ||| | ||  |||||| ||||    
T  33194183 ttgttttaaaatgaatgtcactttcagtttccaatgcaatgataactttttatttttaattgtacccttcaattaatattatgttacattacttccaaag 33194084  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||||  |||||||||||| ||||||||||||||||    
T  33194083 tattattttttctttaatgaaaaacaaatcaatagttgattatgataatttggtaaaat 33194025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 44676219 - 44676377
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||||||| |||| | || |||| |||||||||||||||||||||| ||||||||||| | | ||  || ||| ||||    
T  44676219 ttgtttcaaaatgaatgtcactttcagtttccaatgcaatgataactttttcttttcaattgtaccctccaattaatactgtgttacactagttccaaag 44676318  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  44676319 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 44676377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 47895496 - 47895338
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||| ||| |||| | ||||||| ||||||||||||||| ||||||||||||||||||||  |||  || ||| ||||    
T  47895496 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattatacccttcaattaatactatgttacactatttccaaag 47895397  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||| ||||| |||||||||||| ||||||||||||||||    
T  47895396 tattattttttctttaatgaaaagcaaacaaatagttgattaggataatttggtaaaat 47895338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 50088468 - 50088312
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    ||||||||||||||| ||| |||| ||||| |||| | ||| ||| ||||||||||||||||||||||||||||||||||||  |||  |||||  ||||    
T  50088468 ttgttttaaaatgaacgtcacttttagtttccaatgcaatagtaactttttcttttcaattgtacccttcaattaatactatgttacactactttcaaag 50088369  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaa 235  Q
    ||||| ||||||||||| ||||||||||| |||||||||||| ||||||||||||||    
T  50088368 tattaatttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaa 50088312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 43 - 237
Target Start/End: Original strand, 51397971 - 51398166
Alignment:
Q  43 tccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgt 142  Q
    ||||||||| |||||||||||||||||          |||||| ||||| |||||| |||| ||||||||||   ||||||| |||||||||||||||||    
T  51397971 tccgttttaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaataaatgtcacttttagttttcaatgtaataataactttttcttttcaattgt 51398070  T
Q  143 acccttcaattaatactat-atacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||||||||||||  |||  |||||| ||| ||||||||||||||||| |||||| |||  |||||||||||| ||||||||||||||||    
T  51398071 acccttcaattaatactatgttacactacttccaaaatattattttttctttaatgaaaaataaatcaatagttgattaggataatttggtaaaat 51398166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 2458005 - 2458164
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactata-tacggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||||||| |||||| ||||||| |||||||||| |||| ||||||||||||||||||||| |||  |||||| ||||    
T  2458005 ttgtttcaaaatgaatgtcactttcagtttccaatacaataataactttttctttttaattatacccttcaattaatactatattacactacttccaaag 2458104  T
Q  179 tatt-attttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||  |||||||||||| |||||  |||| |||||||||||| ||||||||||||||||    
T  2458105 tattgtttttttctttaatgaaaattaaaccaatagttgattaggataatttggtaaaat 2458164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 47137961 - 47138121
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||||||||||||||||  ||| |||||||||| | ||||||| ||||| |||||||||||||||||||| |||||||||  ||| ||||||| |||     
T  47137961 ttgttttaaaatgaatgtcatttttagttttcaatgcaataataactttttattttcaattgtacccttcaaataatactatgttacagtacttccaaaa 47138060  T
Q  179 tatta--ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||  |||||||||||| ||||||||||| |||| ||||||| ||||||||||||||||    
T  47138061 tattattttttttctttaatgaaaaacaaacgaataattgattaggataatttggtaaaat 47138121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 30426476 - 30426317
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| ||||||||||||  ||||||||| |||| | ||||||| |||||||||| |||||||||||||||||||||||||  |||  |||||| |||     
T  30426476 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctttttaattgtacccttcaattaatactatgttacactacttccaaaa 30426377  T
Q  179 ta-ttattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    || || ||||||||| || ||||||||||| |||||||||||||||||||||||||||||    
T  30426376 tattttttttttcttcaatgaaaaacaaaccaatagttgattaagataatttggtaaaat 30426317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 11393543 - 11393701
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||||||||||||||||  ||||| ||| |||| | ||||||| ||||||||||||||||||||||||||||||||| ||  |||  |||||| ||||    
T  11393543 ttgttttaaaatgaatgtcattttcaatttccaatgcaataataactttttcttttcaattgtacccttcaattaatacaatgttacactacttccaaag 11393642  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||||||||||  || ||||||  |||||||||||| ||||||||| ||||||    
T  11393643 tattattttttctttaattaataacaaatcaatagttgattaggataatttgataaaat 11393701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 23525468 - 23525310
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    |||||||||||| |||||  ||||   ||| |||| | ||||||| ||||||||||||| | |||||||||||||||||||| | ||  |||||| ||||    
T  23525468 ttgttttaaaataaatgttacttttgatttccaatgcaataataagtttttcttttcaactatacccttcaattaatactatgttacattacttccaaag 23525369  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  23525368 tattattttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaaat 23525310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 31853714 - 31853556
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| ||||| |||||| |||| ||||| || ||| ||||||||||||||||||  ||||||||||||||||||||||||  |||  |||||  ||||    
T  31853714 ttgtttcaaaataaatgtcacttttagtttccagtacaataataattttttcttttttattgtacccttcaattaatactatgttacactactttcaaag 31853615  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  31853614 tattattttttctttaatgaaagacaaaccaatagttgattaggataatttgataaaat 31853556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 81 - 237
Target Start/End: Original strand, 36460805 - 36460961
Alignment:
Q  81 tgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatacta---tatacggtacttcaaaa 177  Q
    ||||| ||||||||| || ||||||||||||||| | ||||||| |||||||||||||||| ||||||||||||||| ||   |||||  |||||| |||    
T  36460805 tgtttcaaaatgaatatcactttcagttttcaatgcaataataactttttcttttcaattgcacccttcaattaatattatgttatac--tacttccaaa 36460902  T
Q  178 gtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||| ||||||||| | ||||||||||| |||||||||||| ||||||||||||||||    
T  36460903 gtatta-tttttctttgatgaaaaacaaaccaatagttgattaggataatttggtaaaat 36460961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 53200832 - 53200675
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    ||||||||||||||||||| |||| |||||||||| | ||||||| |||||||||||||||||| | ||||||||||| |||  |||  |||||  ||||    
T  53200832 ttgttttaaaatgaatgtcacttttagttttcaatgcaataataactttttcttttcaattgta-cattcaattaatattatgttacactactttcaaag 53200734  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    || ||||||||| |||| ||||| |||||||||||||||||| ||||||||||||||||    
T  53200733 tactattttttccttaatgaaaagcaaactaatagttgattaggataatttggtaaaat 53200675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 35557950 - 35557764
Alignment:
Q  40 ccctccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaat 139  Q
    |||||||||||| ||||||||||| |||||          ||||||||||||  || || |||||||||| |||| | ||||||||||||||||||||||    
T  35557950 ccctccgttttaaaatgagtgtcgatttaggaaaaaaaaattgttttaaaatatatatcactttcagtttccaatgcaataataattttttcttttcaat 35557851  T
Q  140 tgtacccttcaattaatactat-atacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagata 225  Q
    |||||| |||||||| ||||||  |||  |||||| ||||||||||||||||||||| |||||| |||| |||||||||||| ||||    
T  35557850 tgtacctttcaattattactatgttacactacttccaaagtattattttttctttaatgaaaaataaaccaatagttgattaggata 35557764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 80 - 227
Target Start/End: Original strand, 48901718 - 48901865
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| ||||||||||||  ||||||||| |||| | ||||||| |||||||||||||||||||||| |||||||||||||||||  || ||  | |||    
T  48901718 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactatatacactaatttcatagt 48901817  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataat 227  Q
    ||||||||||||||||  |||||||||  ||||||||||||| |||||    
T  48901818 attattttttctttaattaaaaacaaagcaatagttgattaaaataat 48901865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 3152958 - 3152801
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||||||| ||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||  |||  |||||| |||     
T  3152958 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaaa 3152859  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||| | ||||||||||  |||||||||| |||| |||||||  |||||| ||||||||    
T  3152858 tattttattttctttaa-taaaaacaaaccaataattgattagaataattgggtaaaat 3152801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 107 - 237
Target Start/End: Original strand, 45566824 - 45566955
Alignment:
Q  107 ttttcaatacgataataattttttcttttcaattgtacccttcaattaatactata-tacggtacttcaaaagtattattttttctttaaggaaaaacaa 205  Q
    |||||||||| ||||||| |||||||||||||||||| | |||||||||||||||| |||  |||||  ||| |||| |||||||||||| |||||||||    
T  45566824 ttttcaatacaataataactttttcttttcaattgtatcattcaattaatactatattacattacttttaaaatattgttttttctttaatgaaaaacaa 45566923  T
Q  206 actaatagttgattaagataatttggtaaaat 237  Q
    || ||| |||||||| ||||||||||||||||    
T  45566924 accaatggttgattaggataatttggtaaaat 45566955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 87 - 215
Target Start/End: Complemental strand, 36729955 - 36729826
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaagtattatt 185  Q
    |||||||||||| |||||| ||| |||| | ||||||| |||||||||||||||||||||||||||||||| |||  |||  |||||| |||||||||||    
T  36729955 aaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattgtacccttcaattaatattatgttacattacttccaaagtattatt 36729856  T
Q  186 ttttctttaaggaaaaacaaactaatagtt 215  Q
    |||| ||||| ||||||||||| |||||||    
T  36729855 ttttatttaatgaaaaacaaaccaatagtt 36729826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 81 - 262
Target Start/End: Original strand, 8817139 - 8817321
Alignment:
Q  81 tgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatac--tatatacggtacttcaaaag 178  Q
    |||||||||||||||||   |||||||| ||||| | |||||||||||||| || |||||||||| || ||||||||   |||| ||  |||||| || |    
T  8817139 tgttttaaaatgaatgttattttcagttatcaatgcaataataattttttcctt-caattgtaccttttaattaatatattatacacactacttctaatg 8817237  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaat 262  Q
    ||||||||||||||||| |||||| |||  ||||||||||||  |||||||| ||||||||| | ||| |||||||||||||||    
T  8817238 tattattttttctttaatgaaaaataaatcaatagttgattagaataatttgataaaataacgtctctctttcttttaattaat 8817321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 50646262 - 50646154
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| ||||| |||||| |||||||||| |||| | ||||||| |||||||||||||||||||| || ||||||||||||||||  ||||||||||||    
T  50646262 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccatttaattaatactatatacattacttcaaaagt 50646163  T
Q  180 attattttt 188  Q
    |||||||||    
T  50646162 attattttt 50646154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 82 - 237
Target Start/End: Original strand, 38363785 - 38363947
Alignment:
Q  82 gttttaaaatgaatgtcgctttcagttttcaatacgataataa------ttttttcttttcaattgtacccttcaattaatactatat-acggtacttca 174  Q
    |||| |||||||||||| |||||||||| |||| | |||||||      |||||| |||||||||||||||||||||||||||||  | ||  ||||||     
T  38363785 gtttcaaaatgaatgtcactttcagtttacaatgcaataataacctttttttttttttttcaattgtacccttcaattaatactacgttacactacttcc 38363884  T
Q  175 aaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||||||| ||||||||||| ||  ||| |||| ||||||||||||||||    
T  38363885 aaagtattattttttctttaatgaaaaacaaaccaacggtttattaggataatttggtaaaat 38363947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 41287651 - 41287490
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacga---taataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaa 175  Q
    |||||| |||||||||||| ||||| |||| || | | |   |||||| ||||||||||||||| |||||||||||||||| |||  |||  |||||| |    
T  41287651 ttgtttcaaaatgaatgtcactttcggtttccagtgcaatactaataactttttcttttcaattatacccttcaattaatattatgttacattacttcca 41287552  T
Q  176 aagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||| |||||||||||| |||||| |||| |||||||||||| ||||||||||||||||    
T  41287551 aagtatttttttttctttaatgaaaaagaaaccaatagttgattaggataatttggtaaaat 41287490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 50346670 - 50346783
Alignment:
Q  127 ttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataa 226  Q
    |||||||||||||||||||||||||| |||| || ||||  |||||| ||  ||||||||||||||||| ||||||||||  ||||||| ||||||||||    
T  50346670 ttttcttttcaattgtacccttcaatcaataataaatacattacttccaacatattattttttctttaatgaaaaacaaatcaatagttaattaagataa 50346769  T
Q  227 tttggtaaaataac 240  Q
    |||| |||||||||    
T  50346770 tttgataaaataac 50346783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 41 - 187
Target Start/End: Original strand, 4392155 - 4392302
Alignment:
Q  41 cctccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaatt 140  Q
    ||||||||||| |||||||||||||||||          |||||| ||||||||||||  ||||||||| ||||   ||||||| |||||||||||||||    
T  4392155 cctccgttttaaaatgagtgtcgttttagcaaaaaataattgtttcaaaatgaatgtcagtttcagtttccaatttaataataactttttcttttcaatt 4392254  T
Q  141 gtacccttcaattaatactatatacggtactt-caaaagtattatttt 187  Q
    ||||||||||||||||||||||||   ||||| |||||||||||||||    
T  4392255 gtacccttcaattaatactatatatactacttccaaaagtattatttt 4392302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 50038323 - 50038215
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||| |||||||||||||||||||||| ||||||||||| |  ||  |||||| |||||    
T  50038323 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtaccctccaattaatactctgcacactacttctaaagt 50038224  T
Q  180 attattttt 188  Q
    |||| ||||    
T  50038223 attactttt 50038215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 317
Target Start/End: Complemental strand, 7231047 - 7230810
Alignment:
Q  81 tgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaat---actatatacggtacttcaaaa 177  Q
    ||||| |||||||||||| |||| ||||   ||| | ||||||| |||||||||||||||||| | ||||||||||   |||||||||  |||||| |||    
T  7231047 tgtttcaaaatgaatgtcacttttagttacgaatgcaataataactttttcttttcaattgtatcattcaattaatactactatatacactacttcgaaa 7230948  T
Q  178 gtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatat 277  Q
     ||||| ||||||||||| || ||| |||| |||||||||||| ||||||||  ||||||| ||| ||| ||| |||| |||||| ||       |||||    
T  7230947 ttatta-tttttctttaatgagaaagaaaccaatagttgattaggataatttactaaaatatcatctctctttatttttattaattca-tttcttaatat 7230850  T
Q  278 atgtgtaaaaactttaaacgacattcattttgaaacagag 317  Q
     ||||||||||  |||||||||||||||||| ||| ||||    
T  7230849 gtgtgtaaaaatcttaaacgacattcattttaaaatagag 7230810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 80 - 195
Target Start/End: Original strand, 22857088 - 22857203
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    ||||||||||||||||||| |||||  ||||||||   ||||||| |||||||||||||||||||  ||||||||||| |||||||  |||||| ||| |    
T  22857088 ttgttttaaaatgaatgtcactttcgattttcaatgtaataataactttttcttttcaattgtactgttcaattaatattatatacactacttctaaaat 22857187  T
Q  180 attattttttctttaa 195  Q
    ||||||||||||||||    
T  22857188 attattttttctttaa 22857203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 32492333 - 32492176
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||| |||||||| | ||||||| ||||||||||||||| |||| ||||||||||||| |  |||  |||||| |||     
T  32492333 ttgtttcaaaatgaatgtcactttcaattttcaatgcaataataactttttcttttcaattataccattcaattaatactttgttacactacttccaaaa 32492234  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||||||||||  ||||| |||  |||| ||||||| ||||||||| ||||||    
T  32492233 tattattttttctttaa-taaaaaaaaatcaataattgattaggataatttgataaaat 32492176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 41 - 237
Target Start/End: Complemental strand, 33024491 - 33024294
Alignment:
Q  41 cctccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaatt 140  Q
    ||||| ||||| ||||||||||||||||||         || |||||||||||||||  |||||||||| |||| | ||||||| ||| |||||||||||    
T  33024491 cctccattttaaaatgagtgtcgttttagtaaaaaaaaattattttaaaatgaatgttactttcagtttccaatgcaataataactttatcttttcaatt 33024392  T
Q  141 gtacccttcaattaatactat-atacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    | ||| ||||||||||| |||  |||  | |||  || ||||||||| |||||||| | ||||||||  |||||||||||||||||||||| ||||||    
T  33024391 gcaccattcaattaatattatgttacactgctttcaacgtattatttcttctttaatggaaaacaaatcaatagttgattaagataatttgataaaat 33024294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 80 - 163
Target Start/End: Complemental strand, 11019978 - 11019895
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat 163  Q
    |||||||||||| |||||| |||||| |||||||| | |||||||||||||||||||||| ||||| |||||||||||||||||    
T  11019978 ttgttttaaaattaatgtcactttcatttttcaatgcaataataattttttcttttcaatcgtacctttcaattaatactatat 11019895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 118 - 242
Target Start/End: Original strand, 27067644 - 27067766
Alignment:
Q  118 ataataattttttcttttcaattgtacccttcaattaatactatatacggtac-ttcaaaagtattattttttctttaaggaaaaacaaactaatagttg 216  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||   || ||||||| | ||| ||||||||||| | ||||||||| ||||||||    
T  27067644 ataataactttttcttttcaattgtacccttcaattaatactacatacacaactttcaaaact-tta-tttttctttaatg-aaaacaaaccaatagttg 27067740  T
Q  217 attaagataatttggtaaaataacat 242  Q
    |||| |||||||||||||| ||||||    
T  27067741 attaggataatttggtaaattaacat 27067766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 39356883 - 39356964
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat 161  Q
    |||||||||||| |||||| ||||||||||||||| | |||||||  ||||||||||||||||||| |||||||||||||||    
T  39356883 ttgttttaaaataaatgtcactttcagttttcaatgcaataataacattttcttttcaattgtacctttcaattaatactat 39356964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 39359007 - 39359076
Alignment:
Q  168 tacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||| ||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  39359007 tacttctaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 39359076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 41850388 - 41850537
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    ||||||||||||||||| | |||| ||||| |||| | ||||||| |||||||||||||||||||||||||||||||| |||  |||  ||||           
T  41850388 ttgttttaaaatgaatgacacttttagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatattatgttacactact------- 41850480  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||| |||||||||||| | ||||||||| |||||||||||| ||||||||||||||||    
T  41850481 tatt-ttttttctttaatg-aaaacaaaccaatagttgattaggataatttggtaaaat 41850537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 13756970 - 13756867
Alignment:
Q  135 tcaattgtacccttcaattaatactatat-acggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggta 233  Q
    ||||||||||||||||||||||| ||| | ||  |||||  |||||||||||||||||||||  |||||||||| |||||||||||| ||||||||| ||    
T  13756970 tcaattgtacccttcaattaatattatgttacattacttttaaagtattattttttctttaataaaaaacaaaccaatagttgattaggataatttgcta 13756871  T
Q  234 aaat 237  Q
    ||||    
T  13756870 aaat 13756867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 43 - 188
Target Start/End: Complemental strand, 31583623 - 31583478
Alignment:
Q  43 tccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgt 142  Q
    ||||||||| ||||||||||||||||||         |||||||||||| |||||| |||||||||| || | | |||||||| ||||||||||||||||    
T  31583623 tccgttttaaaatgagtgtcgttttagtaaaaaaaaattgttttaaaattaatgtcactttcagtttccagtgcaataataatcttttcttttcaattgt 31583524  T
Q  143 acccttcaattaatactatatacggtacttcaaaagtattattttt 188  Q
    ||| | ||||||||||| |  ||  |||||| ||||||||| ||||    
T  31583523 accttccaattaatactctgcacactacttccaaagtattactttt 31583478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 159
Target Start/End: Original strand, 4758952 - 4759068
Alignment:
Q  43 tccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgt 142  Q
    ||||||||| ||||||||||| ||||||         |||||||||||| |||||| |||||| ||| |||| | ||||||| |||||||||||||||||    
T  4758952 tccgttttaaaatgagtgtcgctttagtaaaaagaaattgttttaaaataaatgtcactttcactttccaatgcaataataactttttcttttcaattgt 4759051  T
Q  143 acccttcaattaatact 159  Q
    ||| |||||||||||||    
T  4759052 acctttcaattaatact 4759068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 118 - 254
Target Start/End: Complemental strand, 40717785 - 40717648
Alignment:
Q  118 ataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattat---tttttctttaaggaaaaacaaactaatagt 214  Q
    ||||||||||||||||||||||| || |||||||  |||| |||||||    |||| ||| |||| |   ||||||||||| ||||| ||||| ||||||    
T  40717785 ataataattttttcttttcaattatatccttcaaa-aatattatatacacctcttccaaaatattttctttttttctttaatgaaaa-caaaccaatagt 40717688  T
Q  215 tgattaagataatttggtaaaataacatttctttttcttt 254  Q
    |||||||||||||||||||||||||||| ||| |||||||    
T  40717687 tgattaagataatttggtaaaataacatctctatttcttt 40717648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 42571681 - 42571573
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||| ||| |||||| |||| | ||||||| |||||||||||||||||||||| ||||||||||| |  ||  |||||| |||||    
T  42571681 ttgtttcaaaatgaatgtcacttgcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctgcacactacttccaaagt 42571582  T
Q  180 attattttt 188  Q
    |||| ||||    
T  42571581 attactttt 42571573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 36381474 - 36381366
Alignment:
Q  132 ttttcaattgtacccttcaattaatactatat-acggtacttcaaaagtattattt--tttctttaaggaaaaacaaactaatagttgattaagataatt 228  Q
    |||||||||||| ||||||||||||||||||| ||  |||||  |||||||||| |  ||| ||||| ||||||||||  ||||| ||||||||||||||    
T  36381474 ttttcaattgtatccttcaattaatactatattacattacttttaaagtattatatattttttttaatgaaaaacaaatcaatagatgattaagataatt 36381375  T
Q  229 tggtaaaat 237  Q
    |||||||||    
T  36381374 tggtaaaat 36381366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 47823603 - 47823518
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatac 165  Q
    |||||||||||| ||||||  ||| |||||| ||| | |||||||||||||||||| |||||||  ||||||||||||||||||||    
T  47823603 ttgttttaaaataaatgtcatttttagtttttaatgcaataataattttttctttttaattgtattcttcaattaatactatatac 47823518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 80 - 258
Target Start/End: Original strand, 19115385 - 19115552
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||| |||| ||||| |||| | ||||||| ||||||||||||||| || ||| ||||||||||| |  ||  |||||| |||||    
T  19115385 ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttcttttcaattata-cctccaattaatactctgcacactacttccaaagt 19115483  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaat 258  Q
    |||| ||||          ||||| ||| ||||||| || | |||||||||||||||||||  ||||||||||||||||    
T  19115484 attactttt----------aaaactaaccaatagttaataaggataatttggtaaaataaccattctttttcttttaat 19115552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 177 - 313
Target Start/End: Original strand, 3985946 - 3986079
Alignment:
Q  177 agtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaata 276  Q
    ||||||| |||| |||||  | ||||||||| ||||||| || | |||||||||||||||||| | |||| ||||||||||| | ||||          |    
T  3985946 agtattacttttactttagtggaaaacaaaccaatagttaataaggataatttggtaaaataaaaattctctttcttttaatcattgcatttctta---a 3986042  T
Q  277 tatgtgtaaaaactttaaacgacattcattttgaaac 313  Q
    | ||||||||||| |||||||||||||||||||||||    
T  3986043 tgtgtgtaaaaaccttaaacgacattcattttgaaac 3986079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 39168802 - 39168862
Alignment:
Q  177 agtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||| ||||| |||||||||| |||||||| |||| ||||||||| ||||||    
T  39168802 agtattattttttttttaatgaaaaacaaattaatagttaattaggataatttgataaaat 39168862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 258
Target Start/End: Original strand, 45460689 - 45460832
Alignment:
Q  108 tttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaac 207  Q
    ||||||||| ||||||| | |||||||||||||||||||| ||||||||| |||  | | | |||| |||||||||||  || |       ||||| |||    
T  45460689 tttcaatacaataataactctttcttttcaattgtaccctccaattaatattatgcatgttgcttctaaagtattattactttt-------aaaactaac 45460781  T
Q  208 taatagttgattaagataatttggtaaaataacatttctttttcttttaat 258  Q
     ||||||| || | |||||||||||||||||||| || | |||||||||||    
T  45460782 caatagttaataaggataatttggtaaaataacaattttatttcttttaat 45460832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 108 - 202
Target Start/End: Original strand, 51481961 - 51482056
Alignment:
Q  108 tttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaagtattattttttctttaaggaaaaa 202  Q
    ||||||| | |||||||||||||| |||||||| |||| || |||||||| |||  |||  |||||| |||| |||||||||||||||| ||||||    
T  51481961 tttcaatgcaataataattttttcatttcaattataccttttaattaatattatgttacattacttccaaagcattattttttctttaatgaaaaa 51482056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 258
Target Start/End: Complemental strand, 30680850 - 30680797
Alignment:
Q  204 aaactaatagttgattaagataatttggtaaaataacatttctttttcttttaat 258  Q
    |||| ||||||||||| | |||||||||||||||||||| |||||||||||||||    
T  30680850 aaaccaatagttgattga-ataatttggtaaaataacatctctttttcttttaat 30680797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 52654310 - 52654360
Alignment:
Q  88 aaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaa 138  Q
    |||| |||||| ||||||||||||||||| ||||||| |||||||||||||    
T  52654310 aaataaatgtcactttcagttttcaatacaataataactttttcttttcaa 52654360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 258
Target Start/End: Original strand, 42886749 - 42886915
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||  |||| | ||| |||| | ||||||| ||||||||||||||  |||||| ||||||||| |||  ||  |||||| |||||    
T  42886749 ttgtttcaaaatgaatgttactttaaatttccaatgcaataataactttttcttttcaat--taccctccaattaatattatgcacactacttccaaagt 42886846  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaat 258  Q
    |||| ||||          ||||| ||  ||||||| || | |||||||||||||||||||| |||| |||||||||||    
T  42886847 attactttt----------aaaactaatcaatagttaataaggataatttggtaaaataacaattctctttcttttaat 42886915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 262
Target Start/End: Complemental strand, 47823449 - 47823388
Alignment:
Q  199 aaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaat 262  Q
    ||||||||| |||||||||||| ||| ||||||| ||||||||  ||| |||||||||||||||    
T  47823449 aaaacaaaccaatagttgattaggattatttggttaaataaca--tctctttcttttaattaat 47823388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 312
Target Start/End: Complemental strand, 11337582 - 11337543
Alignment:
Q  273 aatatatgtgtaaaaactttaaacgacattcattttgaaa 312  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  11337582 aatatgtgtgtaaaaaccttaaacgacattcattttgaaa 11337543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 237
Target Start/End: Complemental strand, 36729805 - 36729766
Alignment:
Q  198 aaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  36729805 aaaaacaaaccaatagttgattaggataatttggtaaaat 36729766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 313
Target Start/End: Original strand, 22857207 - 22857286
Alignment:
Q  233 aaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacgacattcattttgaaac 313  Q
    ||||||||||  || ||||||||||||||||||       ||||| ||||||||||||||||| |||||| ||||||||||    
T  22857207 aaaataacatcgctctttcttttaattaatgcatttttt-aatatgtgtgtaaaaactttaaatgacatttattttgaaac 22857286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 417
Target Start/End: Original strand, 44645290 - 44645328
Alignment:
Q  379 ataatacttcatccgtttcaaaatgactgtcgttttagc 417  Q
    |||||||| ||||||||||||||||| ||||||||||||    
T  44645290 ataatactccatccgtttcaaaatgagtgtcgttttagc 44645328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 314
Target Start/End: Complemental strand, 24357281 - 24357244
Alignment:
Q  277 tatgtgtaaaaactttaaacgacattcattttgaaaca 314  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  24357281 tatgtgtgaaaactttaaacgacatttattttgaaaca 24357244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 161
Target Start/End: Complemental strand, 24357494 - 24357465
Alignment:
Q  132 ttttcaattgtacccttcaattaatactat 161  Q
    ||||||||||||||||||||||||||||||    
T  24357494 ttttcaattgtacccttcaattaatactat 24357465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 45392008 - 45391952
Alignment:
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||| || ||||||||   ||||||||||||| ||||||||||||||||    
T  45392008 attattttttcttaaatgaaaaacagt-taatagttgattatgataatttggtaaaat 45391952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 114
Target Start/End: Original strand, 49877155 - 49877188
Alignment:
Q  81 tgttttaaaatgaatgtcgctttcagttttcaat 114  Q
    ||||||||||||||||||||||| ||||||||||    
T  49877155 tgttttaaaatgaatgtcgcttttagttttcaat 49877188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 54918276 - 54918316
Alignment:
Q  277 tatgtgtaaaaactttaaacgacattcattttgaaacagag 317  Q
    ||||||||||||| |||||||| | ||||||||||||||||    
T  54918276 tatgtgtaaaaaccttaaacgatactcattttgaaacagag 54918316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 5e-54; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 40 - 265
Target Start/End: Original strand, 40339417 - 40339642
Alignment:
Q  40 ccctccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaat 139  Q
    |||||||||||| |||||||||||||||||          |||||| ||||||| |||| |||||| |||||||| | ||||||| ||| | ||||||||    
T  40339417 ccctccgttttaaaatgagtgtcgttttagccaaaaagaattgtttcaaaatgactgtcactttcaattttcaatgcaataataactttat-ttttcaat 40339515  T
Q  140 tgtacccttcaattaatactat-atacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaata 238  Q
    |||||||||||||||||| ||| ||||  |||||| |||||||| |||||||||||| ||||||||||| |||||||||||| |||||||||||||||||    
T  40339516 tgtacccttcaattaatattattatacactacttccaaagtattcttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaata 40339615  T
Q  239 acatttctttttcttttaattaatgca 265  Q
    |||||||| ||||||||||||||||||    
T  40339616 acatttctctttcttttaattaatgca 40339642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 83 - 262
Target Start/End: Original strand, 10476137 - 10476316
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatt 182  Q
    |||||||||||||||| |||||| ||| |||| | ||||||| ||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||    
T  10476137 ttttaaaatgaatgtcactttcactttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatatacactacttccaaagtatt 10476236  T
Q  183 attttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaat 262  Q
    |||| || ||||   |||||||||  |||||||||||| ||||||||| ||||||||||||||| |||||||||||||||    
T  10476237 atttattttttagtaaaaaacaaatcaatagttgattaggataatttgataaaataacatttctctttcttttaattaat 10476316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 87 - 314
Target Start/End: Original strand, 28289220 - 28289446
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattt 186  Q
    ||||| |||||| |||| |||||||||| | |||||||  ||||||||||||||||||| |||||||||||||||||||  |||||  ||||||||||||    
T  28289220 aaaataaatgtcactttgagttttcaatgcaataataacattttcttttcaattgtacc-ttcaattaatactatatacactactttcaaagtattattt 28289318  T
Q  187 t-ttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaa 285  Q
    | |||||||| ||||||||||| |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||| |       ||||| |||||||    
T  28289319 ttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataacatctctctttattttaattaatgta-tttattaatatgtgtgtaa 28289417  T
Q  286 aaactttaaacgacattcattttgaaaca 314  Q
    |||| |||||||||||||||||| |||||    
T  28289418 aaaccttaaacgacattcattttaaaaca 28289446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 87 - 309
Target Start/End: Original strand, 37490789 - 37491013
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatata---cggtacttcaaaagtatta 183  Q
    |||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||   |  |||||  |||||||||    
T  37490789 aaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattgtacctttcaattaatactatatagtacactacttggaaagtatta 37490888  T
Q  184 tttt-ttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtg 282  Q
    |||| |||||||| ||||||||||||||||||| |||||||||||||||||||||| ||  ||||||| || |||||||| ||       ||||| ||||    
T  37490889 tttttttctttaatgaaaaacaaactaatagtttattaagataatttggtaaaatatcacatcttttt-ttctaattaattca-tttcttaatatgtgtg 37490986  T
Q  283 taaaaactttaaacgacattcattttg 309  Q
    ||||||| |||||||||||| ||||||    
T  37490987 taaaaaccttaaacgacatttattttg 37491013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 42880087 - 42879929
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||||||||||||   ||||||| ||||||||||||||||||||||||||||||||||||  |||  |||||| ||||    
T  42880087 ttgtttcaaaatgaatgtcactttcagttttcaatgtaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaag 42879988  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
     |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  42879987 aattattttttctttaatgaaaaacaaactaatagttgattacgataatttggtaaaat 42879929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 80 - 258
Target Start/End: Original strand, 48843550 - 48843731
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||||||||||| ||||||| ||||||| | ||||||||||||||  |||||| || ||    
T  48843550 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataattttttctcttcaattatacccttaatttaatactatatacactacttccaacgt 48843649  T
Q  180 atta-ttttttctttaaggaaaaacaaactaatagttgattaagataatttg--gtaaaataacatttctttttcttttaat 258  Q
    |||| |||||||||||| ||||||||||| |||||||||||| |||||||||  |||||||||||| ||| |||||||||||    
T  48843650 attatttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtgtaaaataacatctctctttcttttaat 48843731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 80 - 265
Target Start/End: Complemental strand, 40753581 - 40753398
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    ||||| |||||||||||||  ||||||||||||||   |||||||||||||||||||||||||||| |||||||||||||||||||  |||||  |||||    
T  40753581 ttgttataaaatgaatgtcattttcagttttcaatgtaataataattttttcttttcaattgtaccattcaattaatactatatacactactttcaaagt 40753482  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    ||||| |||||||||| ||||||||||| ||||||||||||  ||||||||||||||||| || | ||||| ||||||||||||||    
T  40753481 attat-ttttctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaataatatct-ttttttttttaattaatgca 40753398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 84 - 313
Target Start/End: Complemental strand, 6563563 - 6563339
Alignment:
Q  84 tttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatta 183  Q
    ||||||||||| ||| ||||||||||| |||   ||||||| |||||||||||||||||||||||||||||||| |||||||     ||| |||||||||    
T  6563563 tttaaaatgaacgtcactttcagtttttaatttaataataactttttcttttcaattgtacccttcaattaatattatatac-----ttccaaagtatta 6563469  T
Q  184 tttttt-ctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtg 282  Q
    |||||| |||||| ||||||||||| ||| |||||||| ||||||||| ||||||||||| ||| |||||||||||||||| |       |||||||| |    
T  6563468 tttttttctttaatgaaaaacaaaccaatggttgattaggataatttgataaaataacatgtctctttcttttaattaatgta-tttcttaatatatgcg 6563370  T
Q  283 taaaaactttaaacgacattcattttgaaac 313  Q
    |||||| ||||||||||||||||||| ||||    
T  6563369 taaaaaatttaaacgacattcattttaaaac 6563339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 43 - 237
Target Start/End: Original strand, 37815685 - 37815880
Alignment:
Q  43 tccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgt 142  Q
    ||||||||| |||||||||||||||| |         |||||| ||||||||||||||||||| ||| |||||| ||||||||||||||||||||||| |    
T  37815685 tccgttttaaaatgagtgtcgttttaatcaaaaaaaattgtttcaaaatgaatgtcgctttcaatttccaatacaataataattttttcttttcaattat 37815784  T
Q  143 acccttcaattaatactat-atacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||||||||||||  |||  |||||  ||||||||||||||||||||| ||||||||||  |||||||||||| ||||||||||||||||    
T  37815785 acccttcaattaatactatgttacactactttcaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 37815880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 80 - 263
Target Start/End: Original strand, 21819282 - 21819464
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||| ||   |||||||||||||||| ||||||| || || |||||||||||| | |||||||||||||||||||  |||||| ||| |    
T  21819282 ttgtttcaaaatgaaagttattttcagttttcaatacaataataaattctt-ttttcaattgtatcattcaattaatactatatacattacttccaaaat 21819380  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatg 263  Q
    |||||||||||||||| ||||||||||| ||||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||    
T  21819381 attattttttctttaatgaaaaacaaaccaatagtttattaggataatttggtaaaataacatctctctttcttttaattaatg 21819464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 80 - 262
Target Start/End: Complemental strand, 19105154 - 19104972
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    ||||||||||||||||||| ||||||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||||||||||  |||||  |||      
T  19105154 ttgttttaaaatgaatgtcactttcagtttttaatgcaataataactttttcttttcaattgtacccttcaattaatactatatacattacttttaaaac 19105055  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaat 262  Q
    |||||||||||||||| ||| ||||||  |||||||||||| ||| | ||| |||||||| || ||| |||||||||||||||    
T  19105054 attattttttctttaatgaagaacaaatcaatagttgattaggattacttgataaaataagatatctctttcttttaattaat 19104972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 1741989 - 1742147
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||||||| |||| | |||||||  |||||||||||||||||||||||||||||||||||  |||  |||||  ||||    
T  1741989 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttcttttcaattgtacccttcaattaatactatgttacactactttcaaag 1742088  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  1742089 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 1742147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 13405280 - 13405122
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    ||||||||||||||||||| |||||||||| ||||   ||||||| ||||||||||||||||||||||||||||||||||||  |||  |||||  ||||    
T  13405280 ttgttttaaaatgaatgtcactttcagtttccaatgtaataataactttttcttttcaattgtacccttcaattaatactatgttacactactttcaaag 13405181  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||| |||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  13405180 tattgttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 13405122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 22297994 - 22298152
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||||||| |||| | ||||||| ||||||||||||| ||||||||||| |||||||||| | ||  |||||| ||||    
T  22297994 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaactgtacccttcagttaatactatgttacactacttccaaag 22298093  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  22298094 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 22298152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 45948783 - 45948625
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||||||| |||| | ||||||| ||||||||||||||||||||||||||||||||||||  |||  |||||| |||     
T  45948783 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacattacttccaaaa 45948684  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||||| ||| |||||||| ||||||||||||||||    
T  45948683 tattattttttctttaatgaaaaacaaaccaatggttgattacgataatttggtaaaat 45948625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 80 - 239
Target Start/End: Complemental strand, 24133283 - 24133122
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||||||| |||| ||| |||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||   ||| || ||| |    
T  24133283 ttgttttaaactgaacgtcactttcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatactatatatactacatccaaaat 24133184  T
Q  180 attattttttctttaaggaaaaacaaactaat--agttgattaagataatttggtaaaataa 239  Q
    |||||||||||||||| ||||||||||  |||  |||||||||  |||||||||||||||||    
T  24133183 attattttttctttaatgaaaaacaaatcaatacagttgattagtataatttggtaaaataa 24133122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 27947654 - 27947496
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||| |||||||||||||| ||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| |||  |||  |||||| ||||    
T  27947654 ttgtcttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaatattatgctacactacttccaaag 27947555  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
     || ||||||||||||| ||||||||||  |||||||||||| |||||||| |||||||    
T  27947554 gatgattttttctttaatgaaaaacaaatcaatagttgattaggataatttagtaaaat 27947496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 87 - 265
Target Start/End: Complemental strand, 29636373 - 29636194
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattt-tttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattatt 185  Q
    ||||| |||||| ||||||||||  ||| | ||||||| || ||| |||||||||  | |||||||||||||||||||||  |||||| |||||||||||    
T  29636373 aaaataaatgtcactttcagtttctaatgcaataataacttcttttttttcaattacatccttcaattaatactatatacactacttctaaagtattatt 29636274  T
Q  186 ttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    |||||||||| ||||||||||| |||| || |||| ||||||||| ||||||||||| ||| |||||||| |||||||||    
T  29636273 ttttctttaatgaaaaacaaaccaataatttattaggataatttgataaaataacatctctctttcttttgattaatgca 29636194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 30312459 - 30312570
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatt 182  Q
    |||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||  |||||| ||||||||    
T  30312459 ttttaaaatgaatgtcactttcggttttcaatacaataataattttttcttttcaattgtacccttcaattaatattgtatacactacttccaaagtatt 30312558  T
Q  183 attttttcttta 194  Q
    ||||||||||||    
T  30312559 attttttcttta 30312570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 21752257 - 21752083
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattt 186  Q
    ||||| ||||||  ||||||||| |||| | ||||||| |||||| ||||||||||||| ||||||||| | |||||||  || ||  ||||||||||||    
T  21752257 aaaataaatgtcattttcagtttccaatgcaataataactttttcgtttcaattgtaccattcaattaacattatatacactattttcaaagtattattt 21752158  T
Q  187 tttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaa 261  Q
    | ||||||| ||||||||||| ||||||||||||  |||||||||||||||||||||| | ||||||||| ||||    
T  21752157 tatctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaataacatttttctttcttttatttaa 21752083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 24680126 - 24680284
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||||||||||||||||  ||||||||| |||| | ||||||| ||||||||||||||||||||||| ||||||| ||||  | |  |||||| ||||    
T  24680126 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtaccctttaattaatgctatgttgcattacttccaaag 24680225  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||||  ||||||||||||  |||||||||||||||    
T  24680226 tattattttttctttaatgaaaaacaaatcaatagttgattagaataatttggtaaaat 24680284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 100 - 237
Target Start/End: Complemental strand, 31418646 - 31418508
Alignment:
Q  100 ctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaagtattattttttctttaagga 198  Q
    |||||||||| |||| | ||||||| |||||||||||||||||||||||||||||||||||| | ||  |||||| |||||||||||||||||||||  |    
T  31418646 ctttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaagtattattttttctttaatta 31418547  T
Q  199 aaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||| ||||||||||||| ||||||||||| ||||    
T  31418546 aaaacaaattaatagttgattaggataatttggtgaaat 31418508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 35777817 - 35777975
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    |||||| ||||| |||||| ||||| ||||  ||| | ||||||| ||||| ||||||||||||||||||||||| |||||||| ||  |||||| ||||    
T  35777817 ttgtttcaaaataaatgtcactttcggtttctaatgcaataataactttttattttcaattgtacccttcaattagtactatattacactacttccaaag 35777916  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||| ||||||||||| ||||||| |||| ||||||||||||||||    
T  35777917 tattattttttctttaatgaaaaacaaaccaatagtttattaggataatttggtaaaat 35777975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 80 - 265
Target Start/End: Original strand, 1031153 - 1031338
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||| | |||||||| || | | |||||||  |||| ||||||||||||| ||||||||||||||||||||  |||||| ||| |    
T  1031153 ttgtttcaaaatgaatgtcaccttcagtttccattgcaataataacattttattttcaattgtactcttcaattaatactatatacactacttccaaatt 1031252  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    ||||||||||||||||  |||||  ||  |||||||||||| ||||||||||||  ||||||| ||| ||||||||||| ||||||    
T  1031253 attattttttctttaataaaaaaagaatcaatagttgattatgataatttggtatgataacatctctctttcttttaataaatgca 1031338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 23935420 - 23935577
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    |||||||||||| ||||||| ||||||||| |||| | ||||||| |||||||||||||| ||||||||||||||||||||| | ||  ||||||  |||    
T  23935420 ttgttttaaaataaatgtcgttttcagtttccaatgcaataataactttttcttttcaat-gtacccttcaattaatactatgttacactacttccgaag 23935518  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
     ||||||||||||||||  |||||||||  |||||||||||| ||||||||||||||||    
T  23935519 gattattttttctttaataaaaaacaaaacaatagttgattaggataatttggtaaaat 23935577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 29531088 - 29530930
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    ||||||| |||||||||||  |||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||  |||   ||||  ||||    
T  29531088 ttgttttgaaatgaatgtcattttcagttttcaatgcaataataattttttcttttcaattgtacccttcaattaatattatgttacaccactttcaaag 29530989  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||||||| ||  |||||||||  |||||||||||| ||| ||||||||||||    
T  29530988 tattattttttcttcaataaaaaacaaatcaatagttgattaggatgatttggtaaaat 29530930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 80 - 252
Target Start/End: Complemental strand, 33939887 - 33939714
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    ||||||||||||||||||| ||||  |||| ||||   ||||||| ||||||||| |||||||||| ||||||||||| |||||||  || ||| |||||    
T  33939887 ttgttttaaaatgaatgtcacttttggtttccaatgtaataataactttttctttccaattgtaccattcaattaatattatatacactaattccaaagt 33939788  T
Q  180 atta-ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttct 252  Q
    |||| |||||||||||| |||||| |||| || |||||||||  |||||||||||||||||||| ||| |||||    
T  33939787 attacttttttctttaatgaaaaataaaccaacagttgattagaataatttggtaaaataacatatctctttct 33939714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 45933737 - 45933584
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    ||||||||||||||||||| ||||||||||||||| | |||||    ||||||||||||||| ||||||||||||||||||| | ||  || ||| ||||    
T  45933737 ttgttttaaaatgaatgtcactttcagttttcaatgcaataat----ttttcttttcaattgcacccttcaattaatactatgttacactatttctaaag 45933642  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||| ||||| ||||||||||| || ||||||||||||||||||| ||||||    
T  45933641 tattatttttt-tttaatgaaaaacaaaccaaaagttgattaagataatttgataaaat 45933584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 83 - 237
Target Start/End: Original strand, 44453136 - 44453289
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaagtat 181  Q
    |||| ||||||||||| |||||||||| |||| | ||||||| ||| | ||||||||||||||||||||||||||||||  |||  |||||| |||||||    
T  44453136 tttttaaatgaatgtcactttcagtttccaatgcaataataactttcttttttcaattgtacccttcaattaatactatgttacactacttctaaagtat 44453235  T
Q  182 tattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||  ||||| ||||||||||| ||||| |||||| ||||||||||||||||    
T  44453236 tattttt--tttaatgaaaaacaaaccaataggtgattaggataatttggtaaaat 44453289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 27935765 - 27935923
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatacta---tatacggtacttcaaa 176  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||| ||||| | |||||||||| | || |||||||||||   || ||  |||||| ||    
T  27935765 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttatcttcaattgtatcatttaattaatactacgttaaac--tacttccaa 27935862  T
Q  177 agtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||||||||||| ||||||||||  ||||||| |||||| ||||||||||||||    
T  27935863 agtattattttttctttaatgaaaaacaaatcaatagttaattaagctaatttggtaaaat 27935923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 118 - 312
Target Start/End: Complemental strand, 8293183 - 8292990
Alignment:
Q  118 ataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttga 217  Q
    ||||||| ||||| |||||||||||| | || |||||||| |||||||  |||||| ||| ||||||||||||| ||| ||||||||||  |||||||||    
T  8293183 ataataactttttattttcaattgtatcttttaattaatattatatacactacttccaaattattattttttctgtaatgaaaaacaaatcaatagttga 8293084  T
Q  218 ttaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacgacattcattttgaaa 312  Q
    | | |||||||||||||||||||| | || ||||||||||||| ||||       ||||  | || |||||| |||||| |||||||||||||||    
T  8293083 tcacgataatttggtaaaataaca-tcctctttcttttaattactgcatttttttaatacgtatgcaaaaaccttaaacaacattcattttgaaa 8292990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 80 - 193
Target Start/End: Original strand, 8603973 - 8604086
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    ||||||||||||||| ||| |||||| ||| |||| | ||||||| ||||||||||||||  ||||||||||||||||||||||||  |||||| |||||    
T  8603973 ttgttttaaaatgaacgtcactttcaatttccaatgcaataataactttttcttttcaatgatacccttcaattaatactatatacactacttccaaagt 8604072  T
Q  180 attattttttcttt 193  Q
    ||||||||||||||    
T  8604073 attattttttcttt 8604086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 87 - 237
Target Start/End: Original strand, 48684728 - 48684879
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaagtattatt 185  Q
    |||||||||||| ||||| |||| |||| | ||||||| |||||||||||||||||||| |||||||||||||||  |||   ||||  |||||||||||    
T  48684728 aaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaattgtacctttcaattaatactatgttacaccactttcaaagtattatt 48684827  T
Q  186 ttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||  |||||||||  ||||| |||| | ||||||||||||||||    
T  48684828 ttttctttaataaaaaacaaatcaatagatgataaggataatttggtaaaat 48684879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 83 - 232
Target Start/End: Original strand, 7759263 - 7759410
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatt 182  Q
    |||||||| |||||||  |||||||||||||||  |||||||| |||| |||  || ||| | |||||||||||| |||||||  |||||  ||||||||    
T  7759263 ttttaaaaggaatgtcattttcagttttcaatataataataatatttttttt--aactgtgctcttcaattaatattatatacactactttcaaagtatt 7759360  T
Q  183 attttttctttaaggaaaaacaaactaatagttgattaagataatttggt 232  Q
    |||||||||||||   |||||||||||||||||||||| |||||||||||    
T  7759361 attttttctttaatagaaaacaaactaatagttgattaggataatttggt 7759410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 184 - 312
Target Start/End: Original strand, 34012559 - 34012686
Alignment:
Q  184 ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgt 283  Q
    |||||||||||| ||||||||||  |||||||||||| ||||||||||||||||||||||| | |||||||||||||||| |       |||||||||||    
T  34012559 ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacatttatctttcttttaattaatgga-tttcttaatatatgtgt 34012657  T
Q  284 aaaaactttaaacgacattcattttgaaa 312  Q
    |||||| ||||| | ||||||||||||||    
T  34012658 aaaaaccttaaatgccattcattttgaaa 34012686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 137 - 313
Target Start/End: Complemental strand, 47461469 - 47461296
Alignment:
Q  137 aattgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaa 236  Q
    |||| |||| |||||||| ||||||||||  |||| | |||| |||||||||||||||| ||||||||||| |||||||||||| ||||||||| |||||    
T  47461469 aattataccattcaattattactatatacactactcctaaag-attattttttctttaatgaaaaacaaaccaatagttgattaggataatttgataaaa 47461371  T
Q  237 taacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacgacattcattttgaaac 313  Q
    | |||| | ||||| |||||||||||| |       ||||| |||||||||| |||||||||| |||||||||||||    
T  47461370 tgacatct-ttttttttttaattaatgta-tttcttaatatgtgtgtaaaaattttaaacgacgttcattttgaaac 47461296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 80 - 263
Target Start/End: Complemental strand, 45499980 - 45499793
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactata-tacggtacttcaaaag 178  Q
    |||||| ||||||||| || |||||||||| |||| | |||||||| |||||||||||| ||| || ||||||||||| |||| |||  |||||  ||||    
T  45499980 ttgtttcaaaatgaatttcactttcagtttccaatgccataataatattttcttttcaaatgtgcctttcaattaatattatactac--tactttcaaag 45499883  T
Q  179 tattatt----ttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacat-ttctttttcttttaattaatg 263  Q
    |||||||    |||||||||| ||||||||||| ||||||| |||| ||||||||||||||||| |||  ||| ||| ||||||||||||    
T  45499882 tattattatttttttctttaatgaaaaacaaaccaatagttaattaggataatttggtaaaatagcatcatctctttattttaattaatg 45499793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 80 - 313
Target Start/End: Original strand, 42285906 - 42286128
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||||||||||||||||  ||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||  ||   ||||| |||||    
T  42285906 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataattttttcttttcaattatacccttcaattaatactatgcacacaacttccaaagt 42286005  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatat 279  Q
    |||| ||||          |||||  || ||||||| || | |||||||||||||||||||| |||| ||| ||||||| | ||||       ||||| |    
T  42286006 attactttt----------aaaaccgaccaatagttaataaggataatttggtaaaataacaattctctttattttaatcattgca-tttcttaatatgt 42286094  T
Q  280 gtgtaaaaactttaaacgacattcattttgaaac 313  Q
     ||||||||| |||||||||||||||||| ||||    
T  42286095 ttgtaaaaaccttaaacgacattcattttaaaac 42286128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 41137726 - 41137884
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| | |||||||| | |||| ||||| |||| | |||||||||||||||||||||||||||||||||||| |||||||  |||  |||||| ||||    
T  41137726 ttgtttcacaatgaatgccacttttagtttccaatgcaataataattttttcttttcaattgtacccttcaattgatactatgttacactacttccaaag 41137825  T
Q  179 tatta-ttttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    || || |||||||||||| | ||| ||||| | |||||||||| ||||||||||||||||    
T  41137826 taatatttttttctttaatg-aaatcaaaccagtagttgattaggataatttggtaaaat 41137884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 177 - 313
Target Start/End: Complemental strand, 19303450 - 19303315
Alignment:
Q  177 agtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaata 276  Q
    |||||||| |||||||||| |||||| |||| ||| |||||||| |||||||| |||||||||||||||| ||||||||||||||||||       ||||    
T  19303450 agtattatattttctttaatgaaaaataaaccaatggttgattatgataatttagtaaaataacatttctctttcttttaattaatgca-ttttttaata 19303352  T
Q  277 tatgtgtaaaaactttaaacgacattcattttgaaac 313  Q
    |   |||||||||||||||||| ||| ||||||||||    
T  19303351 tgcatgtaaaaactttaaacgaaatttattttgaaac 19303315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 716016 - 715937
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatact 159  Q
    |||||| |||||||||||| |||||||||| |||| | |||||||||||||||||||||||||||||| |||||||||||    
T  716016 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtaccctccaattaatact 715937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 169 - 313
Target Start/End: Original strand, 25055869 - 25056010
Alignment:
Q  169 acttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannn 268  Q
    ||||| ||| ||||||||||||||||| ||||||||||  ||||||  |||| |||||| |||||||||||||  ||| ||||||||||||||| ||       
T  25055869 acttccaaaatattattttttctttaatgaaaaacaaatcaatagtaaattatgataatgtggtaaaataaca--tctctttcttttaattaataca-tt 25055965  T
Q  269 nnnnaatatatgtgtaaaaactttaaacgacattcattttgaaac 313  Q
        |||||||||||||||||||||||| ||||||||||| ||||    
T  25055966 ttttaatatatgtgtaaaaactttaaacaacattcattttaaaac 25056010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 206
Target Start/End: Original strand, 4268569 - 4268736
Alignment:
Q  40 ccctccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttc-ttttcaa 138  Q
    |||||||||||| |||||||||||||||||          |||||| ||||||||||||||||||| ||| ||||   |||||| ||||||  |||||||    
T  4268569 ccctccgttttaaaatgagtgtcgttttagacaaaagaaattgtttcaaaatgaatgtcgctttcaatttccaatgtaataatattttttttgttttcaa 4268668  T
Q  139 ttgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaa 206  Q
    ||||||| | ||||||||||||||||   |||||| ||| ||||||||| | ||||| ||||||||||    
T  4268669 ttgtaccttccaattaatactatatatattacttccaaattattattttctttttaatgaaaaacaaa 4268736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 80 - 313
Target Start/End: Complemental strand, 12977839 - 12977617
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||| |||||| ||| |||| | ||||||| |||||||||||||||||||| | ||||||||||| |  ||  |||||| |||||    
T  12977839 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattgtaccatccaattaatactctgcacactacttccaaagt 12977740  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatat 279  Q
    |||| ||||          ||||| ||||||||||| || | |||||||||||||||||||  |||| ||||||||||| | ||||       ||||| |    
T  12977739 attactttt----------aaaactaactaatagttaataaggataatttggtaaaataaccattctctttcttttaatcattgca-tttcttaatatgt 12977651  T
Q  280 gtgtaaaaactttaaacgacattcattttgaaac 313  Q
    ||||||| || | |||||||| ||||||||||||    
T  12977650 gtgtaaacacctaaaacgacactcattttgaaac 12977617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 175 - 265
Target Start/End: Original strand, 7335373 - 7335464
Alignment:
Q  175 aaagtattattttttctttaagg-aaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    |||||||||||||||||||||   |||||||||| || ||||||||| ||||||||||||||||||||| | | ||||||||||||||||||    
T  7335373 aaagtattattttttctttaatttaaaaacaaaccaacagttgattatgataatttggtaaaataacatctttctttcttttaattaatgca 7335464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 125 - 239
Target Start/End: Original strand, 31196613 - 31196725
Alignment:
Q  125 ttttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagat 224  Q
    |||||||||||||||||| |||||||||||||| |||||||  || ||  |||||||||||||||||||||  ||||| |||  |||||||||||  |||    
T  31196613 ttttttcttttcaattgtgcccttcaattaatattatatacactaatttcaaagtattattttttctttaa--aaaaataaatcaatagttgattgtgat 31196710  T
Q  225 aatttggtaaaataa 239  Q
    |||||| ||||||||    
T  31196711 aatttgataaaataa 31196725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 80 - 258
Target Start/End: Original strand, 34274792 - 34274960
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||| |||||||||| |||| | |||||||  ||||||||| ||||||||||| ||||||||||| || ||  ||| || |||||    
T  34274792 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttctttttaattgtaccctccaattaatactctacacactacatccaaagt 34274891  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaat 258  Q
    |||| ||||          ||||| ||| ||||||| || |||||||||||||||||||||  |||| |||||||||||    
T  34274892 attactttt----------aaaactaaccaatagttaataaagataatttggtaaaataaccattctctttcttttaat 34274960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 36807933 - 36808090
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||||||||| ||||||  ||||  |||||||||| ||||||| ||||||||||||||||||| ||||||||||||  ||  |||  |||||  ||||    
T  36807933 ttgttttaaaataaatgtcattttcgcttttcaatacaataataactttttcttttcaattgtactcttcaattaatatcatgttacactactttcaaag 36808032  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    | ||||||||||||||| |||||||||   |||||||||||  | ||||||| ||||||    
T  36808033 t-ttattttttctttaatgaaaaacaactcaatagttgattcgggtaatttgataaaat 36808090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 31930010 - 31929905
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatt 182  Q
    ||||||||||||| |   |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| |  ||  |||||| ||||||||    
T  31930010 ttttaaaatgaatattattttcagttttcaatgcaataataattttttcttttcaattgtaccctccaattaatactttgcacactacttccaaagtatt 31929911  T
Q  183 attttt 188  Q
    | ||||    
T  31929910 actttt 31929905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 80 - 220
Target Start/End: Original strand, 42753706 - 42753843
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||| |||||| ||| |||||| |||||||   |||||||||||| ||| ||||||||||||| |||||||  || ||  |||||    
T  42753706 ttgtttcaaaatgaatgtcactttcaatttccaatacaataataacactttcttttcaatcgta-ccttcaattaatattatatacactatttttaaagt 42753804  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgatta 220  Q
    |||||||||  ||||| |||||| |||| ||||||||||||    
T  42753805 attattttt--tttaatgaaaaataaaccaatagttgatta 42753843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 188
Target Start/End: Complemental strand, 44567234 - 44567086
Alignment:
Q  40 ccctccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaat 139  Q
    |||||||||||| |||| |||||| ||||||         ||||||||||||||||||| |||||| |||||||| | ||||||| ||||||||||||||    
T  44567234 ccctccgttttaaaatgggtgtcgctttagtcaaaaaaatttgttttaaaatgaatgtcactttcaattttcaatgcaataataaatttttcttttcaat 44567135  T
Q  140 tgtacccttcaattaatactatatacggtacttcaaaagtattattttt 188  Q
    |||| | | ||||||||||| |  ||  |||||| ||||||||| ||||    
T  44567134 tgtatcatccaattaatactttgcacactacttccaaagtattactttt 44567086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 24780405 - 24780289
Alignment:
Q  147 ttcaattaatactatatacggtacttcaaaagtattat-tttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttc 245  Q
    ||||||||| |||||||||  || ||  |||||||||  |||||||||||  ||||| |||| |||||| ||||| |||||||| |||||||||||| ||    
T  24780405 ttcaattaagactatatacactaatttcaaagtattacgtttttctttaattaaaaataaaccaatagtagattaggataatttagtaaaataacatctc 24780306  T
Q  246 tttttcttttaattaat 262  Q
    |||||||||||||||||    
T  24780305 tttttcttttaattaat 24780289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 80 - 164
Target Start/End: Original strand, 34012159 - 34012243
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatata 164  Q
    ||||||||||||||||||| |||| ||||| ||||    |||||| ||||| |||||||||||||||||||||||||||||||||    
T  34012159 ttgttttaaaatgaatgtcactttaagtttccaatgtactaataacttttttttttcaattgtacccttcaattaatactatata 34012243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 168 - 237
Target Start/End: Complemental strand, 23155525 - 23155457
Alignment:
Q  168 tacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||| ||||||||||||||| ||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  23155525 tacttctaaagtattatttttt-tttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 23155457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 25440873 - 25440978
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatt 182  Q
    |||||||||  ||||| |||||||||| |||| | ||||||| |||||||||||||||||||||| ||||||||||| |  ||  |||||| ||||||||    
T  25440873 ttttaaaatatatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctgcacactacttccaaagtatt 25440972  T
Q  183 attttt 188  Q
    | ||||    
T  25440973 actttt 25440978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 182 - 237
Target Start/End: Original strand, 10599464 - 10599519
Alignment:
Q  182 tattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  10599464 tattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 10599519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 221 - 313
Target Start/End: Original strand, 4268871 - 4268962
Alignment:
Q  221 agataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacgacattcattttgaaac 313  Q
    |||||||||||||||||||||| | | ||||||||||||||||||       ||||| ||||||||||| |||||||||||||||||| ||||    
T  4268871 agataatttggtaaaataacatctttctttcttttaattaatgca-tttcttaatatgtgtgtaaaaaccttaaacgacattcattttaaaac 4268962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 161
Target Start/End: Original strand, 10599212 - 10599292
Alignment:
Q  81 tgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat 161  Q
    ||||| ||||||||| || ||||||||||||||| | ||||||| |||||||||||||||||||  ||| |||||| ||||    
T  10599212 tgtttcaaaatgaatatcactttcagttttcaatgcaataataactttttcttttcaattgtacttttctattaatgctat 10599292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 80 - 313
Target Start/End: Original strand, 18292333 - 18292555
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||| |||||| ||| |||| | ||||||| |||||| ||||||||||| | | ||||||||||| |  ||  |||||| |||||    
T  18292333 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcctttcaattgtatcatccaattaatactctgcacactacttccaaagt 18292432  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatat 279  Q
    |||| ||||          ||||| ||| ||||||| || | |||||||||||||||||||  |||| ||||||||||| | ||||       ||||| |    
T  18292433 attactttt----------aaaactaaccaatagttaataaggataatttggtaaaataaccattctctttcttttaatcattgca-tttcttaatatgt 18292521  T
Q  280 gtgtaaaaactttaaacgacattcattttgaaac 313  Q
    ||||||| || | |||||||| ||||||||||||    
T  18292522 gtgtaaacacctaaaacgacactcattttgaaac 18292555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 230 - 308
Target Start/End: Original strand, 30312683 - 30312760
Alignment:
Q  230 ggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaaaaactttaaacgacattcatttt 308  Q
    ||||||||||||||| | ||||||||||||||||||       ||||||||||||||||| ||||||||||||||||||    
T  30312683 ggtaaaataacatttatctttcttttaattaatgcatttttt-aatatatgtgtaaaaaccttaaacgacattcatttt 30312760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 33682555 - 33682627
Alignment:
Q  108 tttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagta 180  Q
    ||||||| | |||||||||||| |||||||||| |||||||||||||||||| |||||  |||||| ||||||    
T  33682555 tttcaatgcaataataatttttccttttcaattttacccttcaattaatactttatacactacttccaaagta 33682627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 37502324 - 37502396
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatact 159  Q
    |||||||| ||| |||||||||| |||| | ||||||| ||||||||||||||| |||||| |||||||||||    
T  37502324 aaaatgaacgtcactttcagtttccaatgcaataataactttttcttttcaattttaccctccaattaatact 37502396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 4268790 - 4268836
Alignment:
Q  219 taagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  4268790 taagataatttggtaaaataacatctctctttcttttaattaatgca 4268836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 179 - 265
Target Start/End: Original strand, 47187749 - 47187835
Alignment:
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    |||||||||||||||||  ||||||| |  |||| || || | |||||||||||||||||||| |||| ||||||||||| ||||||    
T  47187749 tattattttttctttaataaaaaacatatcaataattaataaggataatttggtaaaataacaattctctttcttttaatcaatgca 47187835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 6747225 - 6747303
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatact 159  Q
    |||||| |||| ||||||| |||||||||| |||| | ||||||| |||| ||||| ||||||||||| |||||||||||    
T  6747225 ttgtttaaaaacgaatgtcactttcagtttccaatgcaataataactttt-ctttttaattgtaccctccaattaatact 6747303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 18270582 - 18270653
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttc-ttttcaattgtacccttcaattaata 157  Q
    |||||||||||| |||||||||| |||| | ||||||| ||||||  ||||||||||||||| |||||||||    
T  18270582 aaaatgaatgtcactttcagtttccaatgcaataataactttttcactttcaattgtaccctccaattaata 18270653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 317
Target Start/End: Original strand, 2297036 - 2297267
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttct-----tttcaattgtacccttcaattaatactatatacggtacttca 174  Q
    |||||| |||||||||||| ||||||||||||||| | ||||||  |||||||     |||||| |||||| | ||||||||||| |  ||  ||||||     
T  2297036 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataatatctttttcttttaatttcaactgtaccatccaattaatactctgcacactacttcc 2297135  T
Q  175 aaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaa 274  Q
    ||| ||||||||||          ||||| ||| ||||||| || ||||||||||||||||||||   |||| ||||||||||| | ||||       ||    
T  2297136 aaaatattattttt----------aaaactaaccaatagttaataaagataatttggtaaaataatcattctctttcttttaatcattgca-tttcttaa 2297224  T
Q  275 tatatgtgtaaaaactttaaacgacattcattttgaaacagag 317  Q
    ||| |||||||| || | |||||||| | ||||||||||||||    
T  2297225 tatgtgtgtaaacacctaaaacgacaataattttgaaacagag 2297267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 39557323 - 39557380
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaatt 140  Q
    ||||||||| |||||| |||||||||||||||   ||||||||||||||| |||||||    
T  39557323 ttttaaaataaatgtcactttcagttttcaatgtaataataattttttctcttcaatt 39557380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 315
Target Start/End: Complemental strand, 29635894 - 29635858
Alignment:
Q  279 tgtgtaaaaactttaaacgacattcattttgaaacag 315  Q
    ||||||||||| |||||||||||||||||||||||||    
T  29635894 tgtgtaaaaaccttaaacgacattcattttgaaacag 29635858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 416
Target Start/End: Complemental strand, 18270810 - 18270775
Alignment:
Q  381 aatacttcatccgtttcaaaatgactgtcgttttag 416  Q
    |||||||||||||||||||||||| |||||||||||    
T  18270810 aatacttcatccgtttcaaaatgagtgtcgttttag 18270775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 8604076 - 8604117
Alignment:
Q  124 attttttcttttcaattgtacccttcaattaatactatatac 165  Q
    ||||||||||||||||  |||| |||||||||||||||||||    
T  8604076 attttttcttttcaatgataccattcaattaatactatatac 8604117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 25086918 - 25086865
Alignment:
Q  212 agttgattaagataatttggtaaaataacatttctttttcttttaattaatgca 265  Q
    |||||||||  |||||||| |||||||  |||||| ||||||||||||||||||    
T  25086918 agttgattagaataatttgataaaatactatttctctttcttttaattaatgca 25086865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 7795278 - 7795238
Alignment:
Q  197 gaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||||||||| ||||| |||||| ||||||||||||||||    
T  7795278 gaaaaacaaaccaataggtgattaggataatttggtaaaat 7795238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 415
Target Start/End: Original strand, 39557273 - 39557309
Alignment:
Q  379 ataatacttcatccgtttcaaaatgactgtcgtttta 415  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  39557273 ataatacttcatccgttttaaaatgagtgtcgtttta 39557309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 96; Significance: 7e-47; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 3652 - 3501
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaagtattatt 185  Q
    |||||||||||| |||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||  |||  |||||| |||||||||||    
T  3652 aaaatgaatgtcactttcagtttccaatacaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttctaaagtattatt 3553  T
Q  186 ttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||| ||||||||||| |||||||||||| ||||||||| ||||||    
T  3552 ttttctttaatgaaaaacaaaccaatagttgattaggataatttgataaaat 3501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 91; Significance: 6e-44; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 18402 - 18228
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattt 186  Q
    ||||||||||||  ||||||||| |||| | ||||||| |||||||||||||||||||||||||||||| | |||||||  || ||  ||||||||||||    
T  18402 aaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaacattatatacactattttcaaagtattattt 18303  T
Q  187 tttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaa 261  Q
    | ||||||| ||||||||||| ||||||||||||| |||||||| ||||||||||||| | ||||||||| ||||    
T  18302 tatctttaatgaaaaacaaaccaatagttgattaaaataatttgataaaataacatttttctttcttttatttaa 18228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 91; Significance: 6e-44; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 24895 - 24737
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||||||| |||| | ||||||| ||||||||||||||||||||||||||||||||||||  |||  |||||| ||||    
T  24895 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacaatacttccaaag 24796  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||| |||||||||| ||||||||||| |||||||||||| |||| |||||||||||    
T  24795 tattatcttttctttaatgaaaaacaaaccaatagttgattaggatagtttggtaaaat 24737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 80 - 312
Target Start/End: Complemental strand, 841 - 611
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| | |||||||||| |||||||||| || |   ||||||||||||||||||||||||||||||| |||||||| |||||||  || ||| ||||     
T  841 ttgtttcacaatgaatgtcactttcagtttccactggaataataattttttcttttcaattgtaccctttaattaatattatatacactaattccaaaga 742  T
Q  180 attattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatat 279  Q
     || |||||||||||| |||||||| |  |||||||||||||||||||||||||||||||||| ||||||| | ||||| |||| |       || ||||    
T  741 cttgttttttctttaatgaaaaacatatcaatagttgattaagataatttggtaaaataacatctcttttt-tattaataaatgta-tttcttaacatat 644  T
Q  280 gtgtaaaaactttaaacgacattcattttgaaa 312  Q
    |||||||||  ||||||||||||||||||||||    
T  643 gtgtaaaaatcttaaacgacattcattttgaaa 611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 83 - 239
Target Start/End: Original strand, 4141 - 4298
Alignment:
Q  83 ttttaaaatgaatgtcgcttt-cagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtat 181  Q
    ||||||||||||||||  ||| || |||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||||    
T  4141 ttttaaaatgaatgtcatttttcaattttcaatgcaataataattttttcttttcaattgtacccttcaattaatattatatacactacttctaaagtat 4240  T
Q  182 tattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataa 239  Q
    | ||||| ||||||  ||||||||| ||||||||||| | ||||||||||||||||||    
T  4241 tgtttttcctttaataaaaaacaaattaatagttgataaggataatttggtaaaataa 4298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 83 - 254
Target Start/End: Complemental strand, 723 - 552
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtatt 182  Q
    |||||||||||||||| ||| || ||| |||| | ||||||| |||||||||| ||||||||||||||||||||| |||||||  |||||| ||||||||    
T  723 ttttaaaatgaatgtcacttacaatttccaatgcaataataactttttctttttaattgtacccttcaattaatattatatacactacttccaaagtatt 624  T
Q  183 attttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttt 254  Q
    ||||||  ||||| |||||| |||  |||||||||||| |||||||||||||||||| || ||| |||||||    
T  623 atttttgttttaatgaaaaagaaatcaatagttgattatgataatttggtaaaataatatctctctttcttt 552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 87 - 313
Target Start/End: Original strand, 4570 - 4793
Alignment:
Q  87 aaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagtattattt 186  Q
    |||||||||||| |||| | |||| ||| | |||||||||||||||||||||||||||| |||||| |||| |||||||  |||||| ||| |||||| |    
T  4570 aaaatgaatgtcacttttaatttttaatgcaataataattttttcttttcaattgtacctttcaatcaatattatatacactacttccaaaatattatat 4669  T
Q  187 tttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacatttctttttcttttaattaatgcannnnnnnaatatatgtgtaaa 286  Q
    || ||||||  |||||||||  |||||||||||| |||| |||||||||||||||  ||||||| ||||| ||||||||       ||||| ||||||||    
T  4670 ttactttaataaaaaacaaatcaatagttgattaggatagtttggtaaaataaca--tcttttttttttagttaatgca-tttcttaatatgtgtgtaaa 4766  T
Q  287 aactttaaacgacattcattttgaaac 313  Q
    || ||||||||||||| ||||| ||||    
T  4767 aattttaaacgacatttattttaaaac 4793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 43 - 237
Target Start/End: Complemental strand, 21273 - 21078
Alignment:
Q  43 tccgttttagaatgagtgtcgttttagtnnnnnnnnnttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgt 142  Q
    ||||||||| |||||||||||||||| |         || ||||||||||| |||| ||||||||||  ||| | |||||||||||||||||||||||||    
T  21273 tccgttttaaaatgagtgtcgttttaataaaaaaaaattattttaaaatgactgtcactttcagtttcaaatgcaataataattttttcttttcaattgt 21174  T
Q  143 acccttcaattaatactat-atacggtacttcaaaagtattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    |||||||||||||||||||  |||  |||||| |||  |||||||| | ||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  21173 acccttcaattaatactatgttacactacttccaaatgattattttctttttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 21078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 62631 - 62789
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatat-acggtacttcaaaag 178  Q
    |||||| |||||||||||| |||||||||| | ||   ||||||| |||||||||| ||||||||||||||||||||| ||| | ||  |||||| || |    
T  62631 ttgtttcaaaatgaatgtcactttcagtttcctatgtaataataactttttctttttaattgtacccttcaattaatattatgttacactacttccaagg 62730  T
Q  179 tattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 237  Q
    ||||| || |||||||| ||||||||||| |||||||||||| || |||||||||||||    
T  62731 tattacttcttctttaatgaaaaacaaaccaatagttgattaggacaatttggtaaaat 62789  T

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Target: scaffold0136 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 138 - 242
Target Start/End: Original strand, 9600 - 9705
Alignment:
Q  138 attgtacccttcaattaatactatatacggtacttcaaaagtattatttt-ttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaa 236  Q
    |||||||||||||||||||||||||||   |||||  ||| ||||||||| |||||||| ||||||||||| |||||||||||| |||||||| ||||||    
T  9600 attgtacccttcaattaatactatatatactactttcaaattattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttagtaaaa 9699  T
Q  237 taacat 242  Q
    ||||||    
T  9700 taacat 9705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 153
Target Start/End: Original strand, 9470 - 9516
Alignment:
Q  107 ttttcaatacgataataattttttcttttcaattgtacccttcaatt 153  Q
    |||||||| | ||||||||||||||||||||||||||||||| ||||    
T  9470 ttttcaatgcaataataattttttcttttcaattgtaccctttaatt 9516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 665 - 589
Alignment:
Q  83 ttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatact 159  Q
    |||||||||||||||| |||||||||| |||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  665 ttttaaaatgaatgtcactttcagtttccaatgcaataataattttttctttacaattgtacccttcaattaatact 589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 451
Target Start/End: Complemental strand, 713 - 643
Alignment:
Q  381 aatacttcatccgtttcaaaatgactgtcgttttagcnnnnnnnnttgtttcaaaatgaatgtcactttca 451  Q
    |||||| ||||||||||||||||| ||||||||||||        || ||| |||||||||||||||||||    
T  713 aatactccatccgtttcaaaatgaatgtcgttttagccaaaaatattattttaaaatgaatgtcactttca 643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 3965 - 3857
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactatatacggtacttcaaaagt 179  Q
    |||||| |||||||||||| ||||||||||||||| | ||||||| |||||||||||||||||||||| ||||||||||| |  ||  |||||| |||||    
T  3965 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtaccctccaattaatactctgcacactacttccaaagt 3866  T
Q  180 attattttt 188  Q
    |||| ||||    
T  3865 attactttt 3857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 80 - 189
Target Start/End: Complemental strand, 1568 - 1458
Alignment:
Q  80 ttgttttaaaatgaatgtcgctttcagttttcaatacgataataattttttcttttcaattgtacccttcaattaatactat-atacggtacttcaaaag 178  Q
    |||||| |||||||||||| ||||||||||  ||| | || |||| ||||||||||||||||||||||||| |||||| |||  |||  |||||| |||     
T  1568 ttgtttcaaaatgaatgtcactttcagtttctaatgcaatgataactttttcttttcaattgtacccttcatttaatattatgttacactacttccaaaa 1469  T
Q  179 tattatttttt 189  Q
    |||||||||||    
T  1468 tattatttttt 1458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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