View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7461_low_1 (Length: 881)

Name: NF7461_low_1
Description: NF7461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7461_low_1
NF7461_low_1
[»] chr5 (44 HSPs)
chr5 (416-712)||(28594051-28594361)
chr5 (416-711)||(27786367-27786675)
chr5 (78-337)||(38640536-38640802)
chr5 (135-286)||(27212575-27212726)
chr5 (131-267)||(28083477-28083612)
chr5 (416-620)||(26795231-26795432)
chr5 (131-266)||(38692881-38693016)
chr5 (131-337)||(15957567-15957771)
chr5 (128-337)||(20891429-20891638)
chr5 (131-337)||(24203783-24203985)
chr5 (79-245)||(36359626-36359797)
chr5 (131-265)||(40620089-40620222)
chr5 (81-335)||(43388113-43388369)
chr5 (128-266)||(15799113-15799250)
chr5 (134-258)||(39524672-39524795)
chr5 (131-266)||(6156619-6156753)
chr5 (155-266)||(31929229-31929338)
chr5 (128-334)||(38871491-38871696)
chr5 (422-560)||(9689123-9689259)
chr5 (131-266)||(25746915-25747047)
chr5 (131-266)||(37183881-37184015)
chr5 (131-266)||(33487498-33487632)
chr5 (128-286)||(37095011-37095167)
chr5 (134-259)||(26190400-26190524)
chr5 (129-205)||(8032219-8032295)
chr5 (131-266)||(4064819-4064953)
chr5 (128-294)||(26318977-26319142)
chr5 (416-470)||(26806442-26806496)
chr5 (147-270)||(34529909-34530034)
chr5 (134-242)||(38372221-38372328)
chr5 (220-294)||(1350451-1350526)
chr5 (78-199)||(28445450-28445578)
chr5 (129-205)||(32842069-32842145)
chr5 (81-199)||(34440688-34440813)
chr5 (128-199)||(14111851-14111922)
chr5 (78-117)||(36359132-36359171)
chr5 (78-116)||(38641181-38641219)
chr5 (79-116)||(8739234-8739271)
chr5 (152-205)||(12465226-12465279)
chr5 (180-265)||(28108271-28108354)
chr5 (453-560)||(2275983-2276088)
chr5 (422-507)||(378403-378486)
chr5 (79-116)||(16429110-16429147)
chr5 (219-264)||(34440634-34440679)
[»] chr3 (43 HSPs)
chr3 (416-706)||(45926566-45926865)
chr3 (79-265)||(48303918-48304109)
chr3 (78-337)||(45244243-45244504)
chr3 (708-862)||(46742433-46742587)
chr3 (749-843)||(11387880-11387974)
chr3 (416-645)||(10215735-10215961)
chr3 (416-620)||(10225389-10225590)
chr3 (129-286)||(51258308-51258464)
chr3 (416-646)||(10104586-10104813)
chr3 (131-266)||(47740031-47740165)
chr3 (132-264)||(49096327-49096457)
chr3 (128-286)||(47301924-47302082)
chr3 (128-266)||(38977844-38977981)
chr3 (131-265)||(51540713-51540848)
chr3 (128-286)||(3937293-3937451)
chr3 (134-298)||(3352168-3352332)
chr3 (152-265)||(34821516-34821628)
chr3 (131-266)||(3902905-3903039)
chr3 (132-266)||(28872929-28873062)
chr3 (131-266)||(35142003-35142134)
chr3 (160-265)||(47123033-47123137)
chr3 (160-265)||(47130399-47130503)
chr3 (131-264)||(50716180-50716312)
chr3 (131-264)||(50796535-50796667)
chr3 (202-333)||(42936527-42936659)
chr3 (131-245)||(39149757-39149869)
chr3 (218-337)||(33700606-33700731)
chr3 (131-266)||(2358721-2358856)
chr3 (129-266)||(30721903-30722043)
chr3 (131-203)||(34821442-34821514)
chr3 (131-250)||(501240-501358)
chr3 (81-189)||(32024985-32025099)
chr3 (177-270)||(28830237-28830329)
chr3 (79-205)||(44085462-44085595)
chr3 (416-561)||(46749414-46749557)
chr3 (180-337)||(33701462-33701622)
chr3 (210-264)||(42937122-42937176)
chr3 (78-116)||(45244675-45244713)
chr3 (133-250)||(46622885-46623002)
chr3 (78-116)||(48304558-48304596)
chr3 (217-265)||(4394161-4394209)
chr3 (218-266)||(8735097-8735145)
chr3 (218-266)||(9087338-9087386)
[»] chr2 (25 HSPs)
chr2 (78-335)||(25715219-25715479)
chr2 (416-613)||(37981785-37981977)
chr2 (80-286)||(9847462-9847674)
chr2 (131-267)||(25217884-25218019)
chr2 (133-250)||(39447104-39447220)
chr2 (128-286)||(15995204-15995362)
chr2 (131-266)||(33452537-33452671)
chr2 (132-286)||(34517006-34517159)
chr2 (753-831)||(1533744-1533822)
chr2 (131-265)||(36949039-36949172)
chr2 (152-266)||(44465843-44465956)
chr2 (129-286)||(5507321-5507480)
chr2 (131-266)||(45153885-45154019)
chr2 (131-246)||(17474893-17475007)
chr2 (131-332)||(32187963-32188167)
chr2 (133-260)||(41510524-41510651)
chr2 (131-199)||(36874977-36875045)
chr2 (434-560)||(18176247-18176371)
chr2 (131-205)||(4268332-4268406)
chr2 (78-116)||(25715641-25715679)
chr2 (80-116)||(9847254-9847290)
chr2 (416-560)||(15284304-15284448)
chr2 (128-199)||(33366920-33366990)
chr2 (203-266)||(41855054-41855117)
chr2 (79-116)||(34519578-34519615)
[»] chr4 (43 HSPs)
chr4 (416-601)||(37370624-37370807)
chr4 (416-613)||(53594250-53594441)
chr4 (416-571)||(28100349-28100502)
chr4 (129-296)||(3703347-3703514)
chr4 (131-294)||(38536076-38536238)
chr4 (132-296)||(23523809-23523973)
chr4 (131-260)||(25491494-25491622)
chr4 (128-332)||(48319161-48319365)
chr4 (128-266)||(25752540-25752680)
chr4 (131-266)||(19835454-19835588)
chr4 (149-294)||(50392526-50392672)
chr4 (131-266)||(54631562-54631696)
chr4 (135-260)||(40703603-40703728)
chr4 (128-266)||(49396942-49397079)
chr4 (129-285)||(38416479-38416635)
chr4 (131-332)||(2506130-2506333)
chr4 (205-335)||(42660430-42660562)
chr4 (131-266)||(32441745-32441879)
chr4 (133-266)||(17933238-17933370)
chr4 (131-246)||(7931612-7931726)
chr4 (131-242)||(29822577-29822687)
chr4 (152-266)||(6228931-6229044)
chr4 (416-557)||(41762142-41762281)
chr4 (152-260)||(53894111-53894218)
chr4 (131-266)||(25539047-25539181)
chr4 (131-266)||(55052718-55052852)
chr4 (659-708)||(37370466-37370515)
chr4 (79-127)||(50392475-50392523)
chr4 (129-204)||(8106387-8106462)
chr4 (131-267)||(6003770-6003907)
chr4 (433-558)||(53272090-53272213)
chr4 (128-286)||(34972787-34972935)
chr4 (78-116)||(42660211-42660249)
chr4 (78-116)||(50391677-50391715)
chr4 (217-265)||(18051118-18051166)
chr4 (422-525)||(38230942-38231043)
chr4 (131-166)||(31582521-31582556)
chr4 (131-265)||(46440373-46440507)
chr4 (431-556)||(44646891-44647014)
chr4 (147-241)||(49002916-49003009)
chr4 (220-266)||(52076950-52076996)
chr4 (432-556)||(16653434-16653556)
chr4 (541-578)||(32039629-32039666)
[»] chr8 (26 HSPs)
chr8 (416-646)||(24318080-24318318)
chr8 (90-332)||(36404208-36404453)
chr8 (78-286)||(41530574-41530789)
chr8 (749-862)||(38499638-38499751)
chr8 (749-862)||(10182499-10182612)
chr8 (131-332)||(8885552-8885754)
chr8 (133-248)||(27928042-27928156)
chr8 (131-266)||(44106149-44106283)
chr8 (131-264)||(3094609-3094741)
chr8 (128-265)||(21004317-21004452)
chr8 (78-244)||(7971037-7971208)
chr8 (132-266)||(9073430-9073563)
chr8 (131-257)||(31519991-31520116)
chr8 (132-265)||(16310526-16310658)
chr8 (135-256)||(28916719-28916839)
chr8 (131-260)||(42280990-42281121)
chr8 (132-332)||(37248415-37248617)
chr8 (129-205)||(35676635-35676711)
chr8 (47-116)||(24627650-24627712)
chr8 (219-266)||(40994745-40994792)
chr8 (131-197)||(11698385-11698451)
chr8 (433-558)||(14061727-14061850)
chr8 (138-260)||(34853262-34853382)
chr8 (80-116)||(41530963-41530999)
chr8 (78-182)||(31234774-31234883)
chr8 (451-524)||(39038937-39039008)
[»] chr1 (43 HSPs)
chr1 (78-298)||(43319236-43319462)
chr1 (752-842)||(27786291-27786381)
chr1 (416-634)||(42657879-42658106)
chr1 (749-862)||(47897108-47897221)
chr1 (128-266)||(32817707-32817844)
chr1 (131-286)||(18583643-18583798)
chr1 (146-296)||(27794750-27794899)
chr1 (131-236)||(44573195-44573299)
chr1 (772-861)||(8039649-8039738)
chr1 (128-265)||(40908030-40908166)
chr1 (131-266)||(34162820-34162955)
chr1 (422-599)||(27198441-27198626)
chr1 (129-266)||(6223834-6223971)
chr1 (133-286)||(33611511-33611664)
chr1 (131-260)||(15069941-15070069)
chr1 (131-266)||(41584769-41584903)
chr1 (134-286)||(23442643-23442795)
chr1 (128-286)||(30829562-30829709)
chr1 (131-294)||(17000277-17000438)
chr1 (79-266)||(38950207-38950387)
chr1 (128-266)||(45567972-45568110)
chr1 (131-260)||(40650774-40650903)
chr1 (128-265)||(42545895-42546030)
chr1 (202-266)||(38885165-38885229)
chr1 (129-199)||(800899-800969)
chr1 (152-245)||(7011156-7011249)
chr1 (133-205)||(28866732-28866803)
chr1 (770-838)||(32946124-32946192)
chr1 (80-116)||(43319027-43319063)
chr1 (132-266)||(49677419-49677542)
chr1 (146-250)||(52744931-52745034)
chr1 (466-556)||(19007362-19007450)
chr1 (131-266)||(49786195-49786329)
chr1 (134-204)||(34006246-34006316)
chr1 (79-116)||(38950832-38950869)
chr1 (451-558)||(4289132-4289237)
chr1 (422-525)||(48194760-48194861)
chr1 (422-525)||(48203518-48203619)
chr1 (128-199)||(24471411-24471481)
chr1 (132-199)||(32542388-32542455)
chr1 (131-205)||(45046950-45047023)
chr1 (432-560)||(51826614-51826741)
chr1 (162-199)||(9446184-9446221)
[»] chr7 (31 HSPs)
chr7 (752-859)||(32979683-32979790)
chr7 (131-265)||(19225697-19225831)
chr7 (132-332)||(3935966-3936167)
chr7 (131-266)||(42925740-42925874)
chr7 (131-250)||(43737066-43737184)
chr7 (416-561)||(3634368-3634511)
chr7 (761-862)||(10366212-10366313)
chr7 (131-311)||(28230567-28230745)
chr7 (726-830)||(36583082-36583185)
chr7 (131-286)||(24042287-24042441)
chr7 (131-260)||(37518394-37518522)
chr7 (129-293)||(6467594-6467759)
chr7 (131-286)||(47202399-47202554)
chr7 (131-337)||(36468636-36468840)
chr7 (128-226)||(8154865-8154962)
chr7 (136-266)||(42877149-42877278)
chr7 (131-266)||(36408298-36408431)
chr7 (129-231)||(26555138-26555241)
chr7 (155-232)||(9151774-9151850)
chr7 (184-333)||(28349236-28349384)
chr7 (133-296)||(36629100-36629263)
chr7 (128-237)||(33574130-33574238)
chr7 (132-250)||(3304858-3304976)
chr7 (422-556)||(46037132-46037264)
chr7 (147-286)||(28346053-28346191)
chr7 (131-266)||(31642967-31643101)
chr7 (129-197)||(31985615-31985685)
chr7 (482-562)||(9825204-9825284)
chr7 (482-562)||(10727129-10727209)
chr7 (203-285)||(31985680-31985763)
chr7 (431-525)||(42678006-42678098)
[»] scaffold0725 (1 HSPs)
scaffold0725 (749-862)||(1526-1639)
[»] scaffold0508 (1 HSPs)
scaffold0508 (131-337)||(3494-3701)
[»] scaffold0088 (1 HSPs)
scaffold0088 (749-842)||(27462-27555)
[»] scaffold0287 (1 HSPs)
scaffold0287 (416-561)||(11574-11717)
[»] chr6 (23 HSPs)
chr6 (128-266)||(7412754-7412891)
chr6 (749-862)||(9567228-9567341)
chr6 (131-270)||(17264332-17264470)
chr6 (131-337)||(4508401-4508605)
chr6 (129-300)||(24604459-24604632)
chr6 (131-266)||(5699484-5699618)
chr6 (131-266)||(32035039-32035173)
chr6 (498-634)||(11006944-11007081)
chr6 (131-332)||(23406656-23406856)
chr6 (132-243)||(14587660-14587770)
chr6 (131-266)||(2813323-2813459)
chr6 (133-294)||(33413448-33413608)
chr6 (133-294)||(3717384-3717544)
chr6 (129-205)||(9905104-9905180)
chr6 (133-266)||(1945630-1945763)
chr6 (451-561)||(709113-709221)
chr6 (192-294)||(5638776-5638878)
chr6 (416-560)||(5957293-5957435)
chr6 (422-525)||(7100334-7100435)
chr6 (422-525)||(8794195-8794296)
chr6 (432-515)||(10009463-10009544)
chr6 (289-332)||(304835-304878)
chr6 (749-804)||(12330532-12330586)
[»] scaffold0027 (1 HSPs)
scaffold0027 (131-265)||(142062-142194)
[»] scaffold0137 (1 HSPs)
scaffold0137 (128-266)||(9593-9730)
[»] scaffold0182 (1 HSPs)
scaffold0182 (131-265)||(23050-23182)
[»] scaffold0010 (1 HSPs)
scaffold0010 (187-266)||(140534-140612)
[»] scaffold0472 (1 HSPs)
scaffold0472 (431-560)||(1663-1790)
[»] scaffold0016 (1 HSPs)
scaffold0016 (78-116)||(205642-205680)


Alignment Details
Target: chr5 (Bit Score: 168; Significance: 1e-89; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 416 - 712
Target Start/End: Complemental strand, 28594361 - 28594051
Alignment:
Q  416 aattaggatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacatttt 515  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||  |||| |||||||||||| ||||    
T  28594361 aattaggatttctcacaacttataaaatgtctttcggtattcaaaaattgatagattttaatggat--tcttttatataatggattttgtgagacttttt 28594264  T
Q  516 ggttaaaaatgtgaataatatgctcattcaacaatctcacaaaaa----------ttggtgagactctcacaattttcttttccgtgttgtccaacaaga 605  Q
     ||||||||||||||||| ||||||||||||||||||||||||||          || ||||||||| |||||| ||||||||| || |||||||| |||    
T  28594263 agttaaaaatgtgaataaaatgctcattcaacaatctcacaaaaatttgtgagactttgtgagactcccacaatattcttttccatgctgtccaacgaga 28594164  T
Q  606 gtcattttctcattagtttccaggtgcaccgaacattattctcgtaaaattat------attcccatggtccatgaatatcattttcaggtgaacaaaat 699  Q
     |||||||||||||| ||||||| ||||| |||||||||||||||||||||||      |||||||||| ||||| ||||||||||||||||||||||||    
T  28594163 atcattttctcattaatttccagatgcacggaacattattctcgtaaaattatattcccattcccatggcccatgtatatcattttcaggtgaacaaaat 28594064  T
Q  700 gatattgttctaa 712  Q
    |||||||||||||    
T  28594063 gatattgttctaa 28594051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 416 - 711
Target Start/End: Original strand, 27786367 - 27786675
Alignment:
Q  416 aattaggatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacatttt 515  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||| ||||    
T  27786367 aattatgatttctcacaacttataaaatgtcattcggtattcaaaaattgatagattttaatggat--tcttttatggaatggattttgtgagacttttt 27786464  T
Q  516 ggttaaaaatgtgaataatatgctcattcaacaatctcacaaaaa----------ttggtgagactctcacaattttcttttccgtgttgtccaacaaga 605  Q
     |||||||||||||| || ||||||||||||||||||||||||||          || ||||||||||||||||||||||||| |||||||||| | |||    
T  27786465 agttaaaaatgtgaacaaaatgctcattcaacaatctcacaaaaatttatgagactttgtgagactctcacaattttcttttcagtgttgtccagcgaga 27786564  T
Q  606 gtcattttctcattagtttccaggtgc--accgaacattattctcgtaaaattat------attcccatggtccatgaatatcattttcaggtgaacaaa 697  Q
     ||||||||   ||| |||||| ||||  |  |||||||||||||||||||||||      |||||||||| ||||||||||||||| ||||||||||||    
T  27786565 atcattttc---ttattttccatgtgcgtagagaacattattctcgtaaaattatattcccattcccatggcccatgaatatcatttccaggtgaacaaa 27786661  T
Q  698 atgatattgttcta 711  Q
    ||||||||||||||    
T  27786662 atgatattgttcta 27786675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 78 - 337
Target Start/End: Complemental strand, 38640802 - 38640536
Alignment:
Q  78 cggattacgtaatccggattgcatcagcaccatgaaaaagatggtgtttat-----ttcggattatgtaatcagaaaaaatcatgtaatgcgccttattt 172  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||      |||||||||||||||| ||| ||||||| ||| ||||| |||||    
T  38640802 cggattacgtaatccggattgcatcagcaccatgaaaaaaagggtgtttaggggtgttcggattatgtaatccgaataaatcatttaacgcgccctattt 38640703  T
Q  173 tttgagatttccggattacaaaatccggaaaaaatctgtaact--tattttttcaccctttaacaaaggaaaacatcatttcggattataaaatcc-aaa 269  Q
    |||||||||||| ||||| ||||||| |||||  |||||| ||  | |||||||||||||||||||||||||||| |||| | |||||||||||||  ||    
T  38640702 tttgagatttccagattataaaatcc-gaaaatctctgtagctcattttttttcaccctttaacaaaggaaaacaccattccagattataaaatccggaa 38640604  T
Q  270 actttaagggcattttttgaaaaaatagggcatgcgaggaaagccataagatgggaaaagtaaatccc 337  Q
    |||| ||||||||| || ||||||||||||   || ||||||| |||| | ||| |||||||||||||    
T  38640603 acttcaagggcattattggaaaaaatagggtgcgcaaggaaagtcataggctggaaaaagtaaatccc 38640536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 135 - 286
Target Start/End: Complemental strand, 27212726 - 27212575
Alignment:
Q  135 ttatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaac 234  Q
    |||||||||| ||||||||||||||| || || ||||||||||||||| ||||||||||||||| ||||||| | |||||| ||||||||||||| ||||    
T  27212726 ttatgtaatccgaaaaaatcatgtaacgcaccctattttttgagattttcggattacaaaatcc-gaaaaaacccgtaactcattttttcaccctataac 27212628  T
Q  235 aaaggaaaacatcatttcggattataaaatcc-aaaactttaagggcattttt 286  Q
    |||||||||||||| |||||||||| |||||| |||| || || |||||||||    
T  27212627 aaaggaaaacatcagttcggattatgaaatccgaaaatttcaaaggcattttt 27212575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 131 - 267
Target Start/End: Original strand, 28083477 - 28083612
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||||||||||||| ||||||||||  ||||||||||||||||||||| ||||| | || ||| ||||| ||||||||    
T  28083477 cggattatgtaatccggaaatatcatgtaatgcgccctattttttgaattttccggattacaaaatccgg-aaaaacccgttactcattttctcaccctt 28083575  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcca 267  Q
    ||||||| |||||||||||| ||||||||| ||||||    
T  28083576 taacaaaagaaaacatcattccggattatataatcca 28083612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 416 - 620
Target Start/End: Complemental strand, 26795432 - 26795231
Alignment:
Q  416 aattaggatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacatttt 515  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||  ||   || |  ||||||| ||| |||||||||||| | ||    
T  26795432 aattaggatttctcacaacttataaaatgtctttgggtattcaaaaattgatagacttcgat---taattctttatgggatggattttgtgagacttctt 26795336  T
Q  516 ggttaaaaatgtgaataatatgctcattcaacaatc--tcacaaaaattggtgagactctcacaattttcttttccgtgttgtccaacaagagtcatttt 613  Q
    | ||||||||||||| || ||||||||||||||| |  || || ||||| ||||||  |||||||||||||| ||| || |||||||| ||| |||||||    
T  26795335 gattaaaaatgtgaacaaaatgctcattcaacaaacaatctcacaaatttgtgaga--ctcacaattttcttatccttgctgtccaacgagattcatttt 26795238  T
Q  614 ctcatta 620  Q
    | |||||    
T  26795237 cccatta 26795231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 131 - 266
Target Start/End: Original strand, 38692881 - 38693016
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| |||| |||| ||||| |||||||| |  ||||||||||||||||| ||||||||| | || ||| ||||||||||||||    
T  38692881 cggattatgtaatccggaaacatcacgtaacgcgccctatttttttaagtttccggattacaaaattcggaaaaaacccgttactcattttttcaccctt 38692980  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||| |||||||||||| ||||||||| |||||    
T  38692981 taacaaaagaaaacatcattccggattatataatcc 38693016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 131 - 337
Target Start/End: Complemental strand, 15957771 - 15957567
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||| ||||| | ||| |||||||||| |||| ||||||| ||  |||||| ||||||||||||||||||| ||  | ||| |||||| |||||||    
T  15957771 cggattatttaatccggaaacatcatgtaatacgccctatttttcgaagtttccgaattacaaaatccggaaaaa-tccattactcattttt-caccctt 15957674  T
Q  231 taacaaaggaaaacatcatttcggattataaaatccaaaactttaagggcattttttgaaaaaatagggcatgcgaggaaagccataagatgggaaaagt 330  Q
    ||||||| ||||||| |||||||||||||||||||| |||  | || ||||||||| |||||||||| ||   |||||||| ||||||| ||  ||||||    
T  15957673 taacaaaagaaaacaccatttcggattataaaatccgaaaactcaaaggcatttttggaaaaaatagagcgcacgaggaaatccataaggtgaaaaaagt 15957574  T
Q  331 aaatccc 337  Q
    || ||||    
T  15957573 aattccc 15957567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 128 - 337
Target Start/End: Complemental strand, 20891638 - 20891429
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaactta-ttttttcac 226  Q
    ||||||||||||||||  | ||| |||||||||   ||| ||||||||||  |||||||||||||||||||||| |||||| || ||| | |||||||||    
T  20891638 tttcggattatgtaattcggaaacatcatgtaacatgccctattttttgaagtttccggattacaaaatccgga-aaaatccgttactcatttttttcac 20891540  T
Q  227 cctttaacaaaggaaaacatcatttcggattataaaatccaaaactttaagggcattttttgaaaaaatagggcatgcgaggaaagccataagatgggaa 326  Q
    | ||||| ||| ||||||| ||||||||||||||||||||  |   | |||||||||||| ||||||||| |||  ||||||||| ||| | | ||||||    
T  20891539 catttaataaaagaaaacaccatttcggattataaaatccggatactcaagggcatttttggaaaaaataaggcgcgcgaggaaacccacagggtgggaa 20891440  T
Q  327 aagtaaatccc 337  Q
    |||||| ||||    
T  20891439 aagtaattccc 20891429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 131 - 337
Target Start/End: Original strand, 24203783 - 24203985
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||||||| ||||| ||||||||||  |     |||||||||||||| ||||||||||| | | |||||| |||||||    
T  24203783 cggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtc----gattacaaaatccg-aaaaaatctgttaatcatttttccaccctt 24203877  T
Q  231 taacaaaggaaaacatcatttcggattataaaatccaaaactttaagggcattttttg-aaaaaatagggcatgcgaggaaagccataagatgggaaaag 329  Q
    ||||||| ||||||| |||| |||||||||||||||  ||  | || ||||||||| | ||||||||||||| ||||||||| ||| | ||||| |||||    
T  24203878 taacaaaagaaaacaccattccggattataaaatccggaaactcaatggcatttttggaaaaaaatagggcacgcgaggaaacccacaggatggaaaaag 24203977  T
Q  330 taaatccc 337  Q
    ||||||||    
T  24203978 taaatccc 24203985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 79 - 245
Target Start/End: Original strand, 36359626 - 36359797
Alignment:
Q  79 ggattacgtaatccggattgcatcagcaccatgaaaaagat-ggtgttta------tttcggattatgtaatcagaaaaaatcatgtaatgcgccttatt 171  Q
    ||||||||||||| ||||||||||| |||||||||||| |  ||||||||      |||| |||||||||||| ||||||||||||| | ||| | ||||    
T  36359626 ggattacgtaatctggattgcatcaacaccatgaaaaaaaaaggtgtttagggggttttcagattatgtaatccgaaaaaatcatgttacgcgtcctatt 36359725  T
Q  172 ttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaaca 245  Q
    |||||||||||| |||||||||||||| |||||| || |||||| | ||||||||||||||||||| |||||||    
T  36359726 ttttgagatttctggattacaaaatcc-gaaaaattccgtaactca-tttttcaccctttaacaaaagaaaaca 36359797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 131 - 265
Target Start/End: Original strand, 40620089 - 40620222
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| ||||| ||||| ||| | ||| ||||||||||  ||||||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  40620089 cggattatgtaatccgaaaacatcatataacgtgccctattttttgaagtttccggattacaaaatccgg-aaaaatctgttactcattttttcaccctt 40620187  T
Q  231 taacaaaggaaaacatcatttcggattataaaatc 265  Q
     |||||| ||||||||||||  |||||||| ||||    
T  40620188 caacaaaagaaaacatcattatggattatataatc 40620222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 81 - 335
Target Start/End: Original strand, 43388113 - 43388369
Alignment:
Q  81 attacgtaatccggattgcatcagcaccatgaaaaagatggtgttta------tttcggattatgta-atcagaaaaaatcatgtaatgcgccttatttt 173  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||      ||||||||||| |  ||  ||  |  |||||||||||||| ||||||    
T  43388113 attacgtaatccggattgcatcagcaccatgaaaaaaagggtgtttaggaggttttcggattattttgatgtgatta--tcatgtaatgcgccctatttt 43388210  T
Q  174 ttgagatttccggattacaaaatccggaaaaaatctgtaact--tattttttcaccctttaacaaaggaaaacatcatttcggattataaaatccaaaac 271  Q
    || ||||||||||||||||||||||  ||| |||| ||||||  | ||||||||| |||||||||||||||||| ||||||||||||||      |||||    
T  43388211 tttagatttccggattacaaaatcc-aaaagaatccgtaactcattttttttcacactttaacaaaggaaaacaccatttcggattata----ggaaaac 43388305  T
Q  272 tttaagggcattttttgaaaaaatagggcatgcgaggaaagccataagatgggaaaagtaaatc 335  Q
    || |  || ||||||  |||||||||| | ||||||||||| |||  ||||| |||||||||||    
T  43388306 ttcacaggtatttttaaaaaaaataggacgtgcgaggaaagtcatgggatggaaaaagtaaatc 43388369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 128 - 266
Target Start/End: Complemental strand, 15799250 - 15799113
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacc 227  Q
    ||||||||||||||||| | ||| ||||||||| ||||| ||||||||||  |||||||||||||||||||||| |||| | ||||||   |||||||||    
T  15799250 tttcggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccgga-aaaacccgtaactccatttttcacc 15799152  T
Q  228 ctttaacaaaggaaaacatcatttcggattataaaatcc 266  Q
    || ||||||||||||| | |||| |||||||| ||||||    
T  15799151 ctataacaaaggaaaataccattccggattatgaaatcc 15799113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 134 - 258
Target Start/End: Complemental strand, 39524795 - 39524672
Alignment:
Q  134 attatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaa 233  Q
    ||||||||||| ||||| |||||||||  |||| |||||||| |  |||||||||||||||||||||||||| ||  |  || |||||||||||||||||    
T  39524795 attatgtaatccgaaaacatcatgtaacacgccctatttttttaagtttccggattacaaaatccggaaaaa-tccattgctcattttttcaccctttaa 39524697  T
Q  234 caaaggaaaacatcatttcggatta 258  Q
    |||| ||||||||||||||||||||    
T  39524696 caaaagaaaacatcatttcggatta 39524672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 131 - 266
Target Start/End: Complemental strand, 6156753 - 6156619
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||||||| ||||| ||||||||||  |||||||||||||||||||||| |||| | ||||||   ||||||||| |     
T  6156753 cggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccgga-aaaacccgtaactccatttttcaccata 6156655  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||||||||||| |||| |||||||| ||||||    
T  6156654 taacaaaggaaaacaccattccggattatgaaatcc 6156619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 155 - 266
Target Start/End: Original strand, 31929229 - 31929338
Alignment:
Q  155 atgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaacatcatttcgg 254  Q
    |||||||||||| |||||||||| ||||| |||||||||||||||| ||||||| || ||| | ||||||||||||||||||| |||||||||||| |||    
T  31929229 atgtaatgcgccctattttttgaaatttctggattacaaaatccgg-aaaaatccgttactca-tttttcaccctttaacaaaagaaaacatcattccgg 31929326  T
Q  255 attataaaatcc 266  Q
    |||||| |||||    
T  31929327 attatataatcc 31929338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 128 - 334
Target Start/End: Complemental strand, 38871696 - 38871491
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacc 227  Q
    ||||||||||||||||| | ||| ||||||||| || || |||||| |||  ||| |||||||||||||||||| |||||| || ||| ||||||| ||     
T  38871696 tttcggattatgtaatccggaaacatcatgtaacgccccctattttatgaagttttcggattacaaaatccgga-aaaatccgttactcattttttaact 38871598  T
Q  228 ctttaacaaaggaaaacatcatttcggattataaaatccaaaactttaagggcattttttgaaaaaatagggcatgcgaggaaagccataagatgggaaa 327  Q
     ||||||||| ||||||| |||| ||||||||||||||| |||  | ||||  ||||||  |||||||||||   ||||||||| ||| | | ||| |||    
T  38871597 ttttaacaaaagaaaacaccattccggattataaaatccgaaaactcaaggatatttttgaaaaaaatagggtgcgcgaggaaacccacagggtggaaaa 38871498  T
Q  328 agtaaat 334  Q
    |||||||    
T  38871497 agtaaat 38871491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 422 - 560
Target Start/End: Complemental strand, 9689259 - 9689123
Alignment:
Q  422 gatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacattttggttaa 521  Q
    |||||||||  ||||||||||||||| | | |||||||||||  ||||||||||||||||  | ||  ||||| ||||||||||||||| |||| |||||    
T  9689259 gatttctcattacttataaaatgtccattgatattcaaaaatacatagattttaatggat--tattggatggagtgaattttgtgagactttttagttaa 9689162  T
Q  522 aaatgtgaataatatgctcattcaacaatctcacaaaaa 560  Q
    |||| | || || || |||||||||||||||||||||||    
T  9689161 aaatataaacaaaatactcattcaacaatctcacaaaaa 9689123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 131 - 266
Target Start/End: Complemental strand, 25747047 - 25746915
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| ||||| ||||||||| ||||| || |||||||  ||||||||||| ||||||||| ||||||| || ||| ||||||||| | ||    
T  25747047 cggattatgtaatccgaaaacatcatgtaacgcgcccta-tttttgaagtttccggattagaaaatccgg-aaaaatccgttactcattttttca-cttt 25746951  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||| |||||||||||| || ||||||||||||    
T  25746950 taacaaaagaaaacatcattccgaattataaaatcc 25746915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 131 - 266
Target Start/End: Original strand, 37183881 - 37184015
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| ||||| ||||||||| | ||| ||||||||||  ||||  ||||||||||||  |||||| ||||| ||| |||||||||||| |    
T  37183881 cggattatgtaatctgaaaatatcatgtaacgtgccctattttttgaagtttcaagattacaaaatctagaaaaa-tctgttactcattttttcacccgt 37183979  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||| |||||||| ||| ||||||||| |||||    
T  37183980 taacaaaagaaaacattattccggattatataatcc 37184015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 131 - 266
Target Start/End: Complemental strand, 33487632 - 33487498
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||| | ||||| ||||| ||| ||||| ||||||||||  ||| ||||||||||||| ||| ||||| | ||||||   |||||||||||     
T  33487632 cggattatgtaacccgaaaacatcatataacgcgccctattttttgaagttttcggattacaaaattcgg-aaaaacccgtaactccatttttcaccctg 33487534  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||||||||||| |||| |||||||| ||||||    
T  33487533 taacaaaggaaaacaccattccggattatgaaatcc 33487498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 128 - 286
Target Start/End: Original strand, 37095011 - 37095167
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacc 227  Q
    |||||||||  |||||| | ||| ||||||||| |||||||||||||| || ||| ||||||||||||||||| ||||||| ||||||   |||||||||    
T  37095011 tttcggatttggtaatccggaaacatcatgtaacgcgccttattttttaag-ttttcggattacaaaatccgg-aaaaatccgtaactccatttttcacc 37095108  T
Q  228 ctttaacaaaggaaaacatcatttcggattat-aaaatccaaaactttaagggcattttt 286  Q
    || ||||||||| ||||| |||| |||||||| ||| || ||||| | ||||||||||||    
T  37095109 ctataacaaagg-aaacaccattccggattatgaaattcgaaaacctcaagggcattttt 37095167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 134 - 259
Target Start/End: Original strand, 26190400 - 26190524
Alignment:
Q  134 attatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaa 233  Q
    ||||||||||| ||||| ||||||||| || || ||||||||||  ||||||||||||||||||||| ||||||| ||||||   ||||||||||  |||    
T  26190400 attatgtaatccgaaaacatcatgtaacgcaccctattttttgaagtttccggattacaaaatccgg-aaaaatccgtaactccatttttcacccgataa 26190498  T
Q  234 caaaggaaaacatcatttcggattat 259  Q
     ||||||||||| |||| | ||||||    
T  26190499 gaaaggaaaacaccattccagattat 26190524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 8032295 - 8032219
Alignment:
Q  129 ttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaa 205  Q
    |||||||||||||||| | ||||||||||||||| ||| |||||||||| |||||| |||||||||||||| |||||    
T  8032295 ttcggattatgtaatccggaaaaatcatgtaatgtgccctattttttgaaatttccagattacaaaatccgaaaaaa 8032219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 131 - 266
Target Start/End: Original strand, 4064819 - 4064953
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||| |||  |||| |||||||| |  ||||||||||||| ||||||||||||  | ||||||   |||||||||||     
T  4064819 cggattatgtaatccggaaacatcatctaacacgccctattttttaaagtttccggattacataatccggaaaaaccc-gtaactccatttttcacccta 4064917  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||||||||||| |||| |||||||| ||||||    
T  4064918 taacaaaggaaaacaccattccggattatgaaatcc 4064953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 128 - 294
Target Start/End: Complemental strand, 26319142 - 26318977
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacc 227  Q
    ||||||||||||||||| | ||| ||||||||| || || ||||||   || ||||||||| |||||||||||||||| || ||||||   |||||||||    
T  26319142 tttcggattatgtaatccggaaacatcatgtaacgcaccctattttggaag-tttccggataacaaaatccggaaaaa-tccgtaactccatttttcacc 26319045  T
Q  228 ctttaacaaaggaaaacatcatttcggattataaaatcc-aaaactttaagggcattttttgaaaaaa 294  Q
    || ||||||||||||||| |||| || ||||| ||||||  ||||   |||||||||||| |||||||    
T  26319044 ctataacaaaggaaaacaccattccgaattatgaaatccggaaaccgcaagggcatttttggaaaaaa 26318977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 416 - 470
Target Start/End: Complemental strand, 26806496 - 26806442
Alignment:
Q  416 aattaggatttctcacaacttataaaatgtccttcggtattcaaaaattgataga 470  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  26806496 aattaggatttctcacaacttataaaatgtctttgggtattcaaaaattgataga 26806442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 147 - 270
Target Start/End: Complemental strand, 34530034 - 34529909
Alignment:
Q  147 aaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccg--gaaaaaatctgtaacttattttttcaccctttaacaaaggaaaac 244  Q
    ||||||||||||||  |||| ||||||||||| |||  |||||||||||||||   |||||||| | |||| ||||||||| ||| |||||||||||||     
T  34530034 aaaaaatcatgtaacacgccctattttttgaggtttttggattacaaaatccgaaaaaaaaatccgcaactcattttttcatcctataacaaaggaaaaa 34529935  T
Q  245 atcatttcggattataaaatccaaaa 270  Q
     | | |||||||||| ||||||||||    
T  34529934 ctaagttcggattatgaaatccaaaa 34529909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 134 - 242
Target Start/End: Complemental strand, 38372328 - 38372221
Alignment:
Q  134 attatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaa 233  Q
    ||||||||||| | ||| |||||||||  |||| |||||||| |  ||||||||||||||||||| | ||||||| || ||| |||||||||||||||||    
T  38372328 attatgtaatccggaaacatcatgtaacccgccctatttttttaagtttccggattacaaaatccag-aaaaatccgttactcattttttcaccctttaa 38372230  T
Q  234 caaaggaaa 242  Q
    |||| ||||    
T  38372229 caaaagaaa 38372221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 220 - 294
Target Start/End: Original strand, 1350451 - 1350526
Alignment:
Q  220 ttttcaccctttaacaaaggaaaacatcatttcggattataaaatcc-aaaactttaagggcattttttgaaaaaa 294  Q
    |||||||||| ||||||||||||||| || |||||||||| |||||| |||| || |||||||||||| |||||||    
T  1350451 ttttcaccctataacaaaggaaaacaccagttcggattatgaaatccgaaaatttcaagggcatttttggaaaaaa 1350526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 199
Target Start/End: Original strand, 28445450 - 28445578
Alignment:
Q  78 cggattacgtaatccggattgcatcagcaccatgaaaaagatggtgtttat--------ttcggattatgtaatcagaaaaaatcatgtaatgcgcctta 169  Q
    |||||||||||||||| | |||||| | ||||||||||| ||||||||||         |||||||| | ||||| |||||| |||| ||  ||||| ||    
T  28445450 cggattacgtaatccgaactgcatcggtaccatgaaaaa-atggtgtttagggagggtgttcggattttataatctgaaaaattcatttagcgcgcccta 28445548  T
Q  170 ttttttgagatttccggattacaaaatccg 199  Q
    ||||||||||||| ||||||||||||||||    
T  28445549 ttttttgagattttcggattacaaaatccg 28445578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 205
Target Start/End: Original strand, 32842069 - 32842145
Alignment:
Q  129 ttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaa 205  Q
    ||||||||||||||||   |||||| || ||  ||||| ||||||||||  ||||||||||||||||||||||||||    
T  32842069 ttcggattatgtaatcttgaaaaattatctagcgcgccctattttttgaagtttccggattacaaaatccggaaaaa 32842145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 199
Target Start/End: Complemental strand, 34440813 - 34440688
Alignment:
Q  81 attacgtaatccggattgcatcagcaccatga--aaaagatggtgttta------tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattt 172  Q
    |||||||||||| |||||||||||||||||||  |||| | ||||||||      |||||||||||| |||| ||||| ||||||||| ||| | || ||    
T  34440813 attacgtaatccagattgcatcagcaccatgaaaaaaaaagggtgtttagggggttttcggattatgcaatccgaaaacatcatgtaacgcgtccta-tt 34440715  T
Q  173 tttgagatttccggattacaaaatccg 199  Q
    |||||  ||| ||||||||||||||||    
T  34440714 tttgaagttttcggattacaaaatccg 34440688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 14111922 - 14111851
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccg 199  Q
    |||| ||||||||||||  |||| ||||||||| ||||| ||||||||||  |||| |||||||||||||||    
T  14111922 tttcagattatgtaatccaaaaacatcatgtaacgcgccctattttttgaagtttctggattacaaaatccg 14111851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 117
Target Start/End: Original strand, 36359132 - 36359171
Alignment:
Q  78 cggattacgtaatccggattgcatcagcaccatgaaaaag 117  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  36359132 cggattacgtaatccgaattgcatcagcaccatgaaaaag 36359171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 38641219 - 38641181
Alignment:
Q  78 cggattacgtaatccggattgcatcagcaccatgaaaaa 116  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  38641219 cggattacgtaatccggattgcattagcaccatgaaaaa 38641181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 8739234 - 8739271
Alignment:
Q  79 ggattacgtaatccggattgcatcagcaccatgaaaaa 116  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  8739234 ggattacgtaatccgaattgcatcagcaccatgaaaaa 8739271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 12465226 - 12465279
Alignment:
Q  152 atcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaa 205  Q
    |||||||||  |||| ||||||||||  ||||||||||||||||||||||||||    
T  12465226 atcatgtaacacgccctattttttgaagtttccggattacaaaatccggaaaaa 12465279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 265
Target Start/End: Complemental strand, 28108354 - 28108271
Alignment:
Q  180 tttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaacatcatttcggattataaaatc 265  Q
    |||||||||||||||||| |||||||  | || ||| ||||| ||||| ||||||||| |||||||||||| ||||||||| ||||    
T  28108354 tttccggattacaaaatctggaaaaaccc-gttactcattttctcacc-tttaacaaaagaaaacatcattccggattatataatc 28108271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 453 - 560
Target Start/End: Complemental strand, 2276088 - 2275983
Alignment:
Q  453 tattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacattttggttaaaaatgtgaataatatgctcattcaacaatct 552  Q
    ||||||||| |  ||||||||||||||||  |||||| |  |||| |||||||||||  |||| |||||||||    || | ||||||||||||||||||    
T  2276088 tattcaaaagtctatagattttaatggat--tcttttgtataatggattttgtgagattttttagttaaaaatacacatgacatgctcattcaacaatct 2275991  T
Q  553 cacaaaaa 560  Q
    ||||||||    
T  2275990 cacaaaaa 2275983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 422 - 507
Target Start/End: Original strand, 378403 - 378486
Alignment:
Q  422 gatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtga 507  Q
    ||||||| | |||||||||||||||  ||| | || |||| |||||||||||||||||  |||||| ||||||||| ||| |||||    
T  378403 gatttctaagaacttataaaatgtctctcgatgttgaaaatttgatagattttaatgg--attcttctatggaatggattgtgtga 378486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 16429147 - 16429110
Alignment:
Q  79 ggattacgtaatccggattgcatcagcaccatgaaaaa 116  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  16429147 ggattacgtaatccgaactgcatcagcaccatgaaaaa 16429110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 34440679 - 34440634
Alignment:
Q  219 tttttcaccctttaacaaaggaaaacatcatttcggattataaaat 264  Q
    ||||| ||||| |||||||||||||||||||||| |||||| ||||    
T  34440679 ttttttaccctataacaaaggaaaacatcatttcagattatgaaat 34440634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 5e-74; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 416 - 706
Target Start/End: Complemental strand, 45926865 - 45926566
Alignment:
Q  416 aattaggatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacatttt 515  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||  ||||||||||| || | |||||||||||| ||||    
T  45926865 aattaggatttctcacaacttataaaatctcattcggtattcaaaaattgatagattttaatgg--attcttttatgcaacgtattttgtgagacttttt 45926768  T
Q  516 ggttaaaaatgtgaataatatgctcattcaacaatctcacaaaaa----------ttggtgagactctcacaattttcttttccgtgttgtccaacaaga 605  Q
    | ||||||||||||| || ||||||||||||||||||||||||||          || ||||||||| ||||||||||||||     |||||||||||||    
T  45926767 gattaaaaatgtgaacaaaatgctcattcaacaatctcacaaaaatttatgagactttgtgagactcccacaattttctttt-----ttgtccaacaaga 45926673  T
Q  606 gtcattttctcattagtttccaggtgcaccgaacattattctcgtaaaattat------attcccatggtccatgaatatcattttcaggtgaacaaaat 699  Q
     ||||||||||||||||||||||||||||  ||||||||| ||||||||||||      |||||||||| ||||||||| ||||| || |||||||||||    
T  45926672 atcattttctcattagtttccaggtgcacataacattattatcgtaaaattatattctcattcccatggcccatgaataacatttccacgtgaacaaaat 45926573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 79 - 265
Target Start/End: Complemental strand, 48304109 - 48303918
Alignment:
Q  79 ggattacgtaatccggattgcatcagcaccatgaaaaagatggtgttta------tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattt 172  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||| |      ||||||||||||||||| |||||||||||||||  | || |||||    
T  48304109 ggattacgtaatccggattgcatcaccaccatgaaaaaaatggtgttgagggggttttcggattatgtaatctgaaaaaatcatgtaacacaccctattt 48304010  T
Q  173 tttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaacatcatttcggattataaaatc 265  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||| |||| |||||||| |||||    
T  48304009 tttgagatttccggattacaaaatccgga-aaaatccgtaactcattttttcaccctttaacaaaggaaaacaccattccggattatgaaatc 48303918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 78 - 337
Target Start/End: Complemental strand, 45244504 - 45244243
Alignment:
Q  78 cggattacgtaatccggattgcatcagcaccatgaaaaagatggtgttta--tttcggattatgtaatcagaaaaaatcatgtaatgcgccttatttttt 175  Q
    ||||||||||||||| ||||||||||||||||||||||| | |||||||   |||| |||||||||||| ||||||||||||||| ||||| ||||||||    
T  45244504 cggattacgtaatccagattgcatcagcaccatgaaaaaaagggtgtttggttttcagattatgtaatccgaaaaaatcatgtaacgcgccctatttttt 45244405  T
Q  176 gagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaacatcatttcggattataaaatcc-aaaacttt 274  Q
    ||||||| || ||||||||||||||| ||||||  ||||| ||||||||| | |||||||||||||||||  ||| |||||||| || ||| |||||||     
T  45244404 gagattttcgaattacaaaatccgga-aaaatccataactcattttttcatcttttaacaaaggaaaacacaattccggattattaattccgaaaacttc 45244306  T
Q  275 aagggcattttttgaaaaaatagggcatgcgaggaaagccataagatgggaaaagtaaatccc 337  Q
    ||||  ||||||  ||||||||||||  ||||| ||| ||||| | ||| |||||||||||||    
T  45244305 aaggatatttttgaaaaaaatagggcgcgcgagaaaaaccatagggtggaaaaagtaaatccc 45244243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 708 - 862
Target Start/End: Original strand, 46742433 - 46742587
Alignment:
Q  708 tctaaaaacagaacc-gtcgcttacacctttttgcacccgttatccaaaccctcaatttacaagatgtagtcggtcagggtggtggtgcgacgagtgaca 806  Q
    ||||||||||||||| ||||| |||||||| || |||||   |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  46742433 tctaaaaacagaacccgtcgcatacaccttcttccacccca-atccaaaccctcaatttacaagatgtagccggtcagggtggtggtgcgacgagtgaca 46742531  T
Q  807 ccagtcctccgcaccacctctaaacgccagatctgttagcgccgacgttaaggttg 862  Q
    |||||||||||||||||||||||||||||||| |||   ||||| |||||||||||    
T  46742532 ccagtcctccgcaccacctctaaacgccagatttgtcgacgccggcgttaaggttg 46742587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 749 - 843
Target Start/End: Complemental strand, 11387974 - 11387880
Alignment:
Q  749 atccaaaccctcaatttacaagatgtagtcggtcagggtggtggtgcgacgagtgacaccagtcctccgcaccacctctaaacgccagatctgtt 843  Q
    ||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11387974 atccaaaccctcaatttgcaagatgtagccgctcagggtggtggtgcgacgagtgacaccagtcctccgcaccacctctaaacgccagatctgtt 11387880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 416 - 645
Target Start/End: Complemental strand, 10215961 - 10215735
Alignment:
Q  416 aattaggatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacatttt 515  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||   |||| ||||||| ||| ||||||| |||| | ||    
T  10215961 aattaggatttctcacaacttataaaatgtccttgggtattcaaaaattgatagatttcgatg--aattc-tttatgggatggattttgtaagacttctt 10215865  T
Q  516 ggttaaaaatgtgaataatatgctcattcaacaatc--tcacaaaaattggtgagactctcacaattttcttttccgtgttgtccaacaagagtcatttt 613  Q
    | ||||||||||||| || ||||||||| ||||| |  || || ||||| ||||||  |||||||||||||| ||| || |||||| | ||| |||||||    
T  10215864 gattaaaaatgtgaacaaaatgctcatttaacaaacaatctcacaaatttgtgaga--ctcacaattttcttatccttgctgtccaccgagattcatttt 10215767  T
Q  614 ctcattagtttccaggtgcaccgaacattatt 645  Q
    | |||||||||| || ||||  ||||||||||    
T  10215766 cccattagtttcaagatgcatagaacattatt 10215735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 416 - 620
Target Start/End: Complemental strand, 10225590 - 10225389
Alignment:
Q  416 aattaggatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacatttt 515  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||   |||| ||||||  ||| |||||||||||| | ||    
T  10225590 aattaggatttctcacaacttataaaatgtccttgggtattcaaaaattgatagatttcgatg--aattc-tttatgtgatggattttgtgagacttctt 10225494  T
Q  516 ggttaaaaatgtgaataatatgctcattcaacaatc--tcacaaaaattggtgagactctcacaattttcttttccgtgttgtccaacaagagtcatttt 613  Q
    | ||||||||||||| || ||||||||||||||| |  || || ||||| ||||||  |||||||||||||| ||| || |||||||| ||| |||||||    
T  10225493 gattaaaaatgtgaacaaaatgctcattcaacaaacaatctcacaaatttgtgaga--ctcacaattttcttatccttgctgtccaacgagattcatttt 10225396  T
Q  614 ctcatta 620  Q
    | |||||    
T  10225395 cccatta 10225389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 129 - 286
Target Start/End: Complemental strand, 51258464 - 51258308
Alignment:
Q  129 ttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccc 228  Q
    |||||||||||||||| |||||||| |||||| ||||| |||||||||| ||||  ||||||||||||||||| |||||| |||||| | ||||||||||    
T  51258464 ttcggattatgtaatccgaaaaaattatgtaacgcgccctattttttgaaatttatggattacaaaatccgga-aaaatccgtaactca-tttttcaccc 51258367  T
Q  229 tttaacaaaggaaaacatcatttcggattataaaatcca-aaactttaagggcattttt 286  Q
    |||||||||||||||||  ||| |||||||| ||||||| |||||| |||| |||||||    
T  51258366 tttaacaaaggaaaacacaattccggattatgaaatccagaaacttcaaggacattttt 51258308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 416 - 646
Target Start/End: Complemental strand, 10104813 - 10104586
Alignment:
Q  416 aattaggatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacatttt 515  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||  ||   || |  ||||||| ||| |||||||||||| | ||    
T  10104813 aattaggatttctcacaacttataaaatgtctttgggtattcaaaaattgatagacttcgat---taattctttatgggatggattttgtgagacttctt 10104717  T
Q  516 ggttaaaaatgtgaataatatgctcattcaacaatc--tcacaaaaattggtgagactctcacaattttcttttccgtgttgtccaacaagagtcatttt 613  Q
    | ||||||||||||| || ||||||||||||||| |  |  || ||||| ||||||  |||||||||||||| ||| || |||||| | ||| |||||||    
T  10104716 gattaaaaatgtgaacaaaatgctcattcaacaaacaatgtcacaaatttgtgaga--ctcacaattttcttatccttgctgtccaccgagattcatttt 10104619  T
Q  614 ctcattagtttccaggtgcaccgaacattattc 646  Q
    | |||||||||| || ||||  |||||||||||    
T  10104618 cccattagtttcaagatgcatagaacattattc 10104586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 131 - 266
Target Start/End: Original strand, 47740031 - 47740165
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||||||| ||||| ||||||||||  |||||||||||||||||| || ||||||||||  || ||||||||||||||    
T  47740031 cggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatctgg-aaaaatctgttgctcattttttcaccctt 47740129  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||| |||||||||||| ||||||||| |||||    
T  47740130 taacaaaagaaaacatcattccggattatataatcc 47740165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 132 - 264
Target Start/End: Original strand, 49096327 - 49096457
Alignment:
Q  132 ggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacccttt 231  Q
    ||||||||||||  |||||||||||||||   ||| ||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||    
T  49096327 ggattatgtaattcgaaaaaatcatgtaacatgccatattttttgagatttccggattacaaaatccgg-aaaaatccgtaactta-tttttcacccttt 49096424  T
Q  232 aacaaaggaaaacatcatttcggattataaaat 264  Q
    || |||| ||||||||||| | |||||| ||||    
T  49096425 aataaagaaaaacatcattccagattatgaaat 49096457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 128 - 286
Target Start/End: Complemental strand, 47302082 - 47301924
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacc 227  Q
    ||||||||||||||||| | ||| ||||||||| |||||||||||||| |  |||||||||||||||||||||| ||||||  |||||   |||||||||    
T  47302082 tttcggattatgtaatccggaaacatcatgtaacgcgccttatttttttaagtttccggattacaaaatccgga-aaaatccataactccatttttcacc 47301984  T
Q  228 ctttaacaaaggaaaacatcatttcggattataaaatcc-aaaactttaagggcattttt 286  Q
    || ||||||||||||||| |||| || ||||| |||||| ||||||| |||| |||||||    
T  47301983 ctataacaaaggaaaacaccattccgaattatgaaatccgaaaacttcaaggacattttt 47301924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 128 - 266
Target Start/End: Original strand, 38977844 - 38977981
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacc 227  Q
    |||||||||||||||||  |||| | ||||||| ||||| ||||||||||  ||||||||||||||||||  | ||||||| || |||||||||||||||    
T  38977844 tttcggattatgtaatcccaaaacaccatgtaacgcgccctattttttgaagtttccggattacaaaatctag-aaaaatccgttacttattttttcacc 38977942  T
Q  228 ctttaacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||||||  |||||| |||| | ||||||| |||||    
T  38977943 ctttaacaaaataaaacaccattccagattatataatcc 38977981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 131 - 265
Target Start/End: Original strand, 51540713 - 51540848
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttatttt--ttcaccc 228  Q
    |||||||||||||  | ||| ||||||||| ||||| ||||||||||  |||||||||| |||||||| |||||| || || ||| |||||  |||||||    
T  51540713 cggattatgtaattcggaaacatcatgtaacgcgccctattttttgaagtttccggattccaaaatccagaaaaa-tccgttactcattttttttcaccc 51540811  T
Q  229 tttaacaaaggaaaacatcatttcggattataaaatc 265  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  51540812 tttaacaaaagaaaacaccatttcggattataaaatc 51540848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 128 - 286
Target Start/End: Complemental strand, 3937451 - 3937293
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacc 227  Q
    ||||| |||||||||||   ||| ||||||||| ||||| ||||||||||  ||||||||||||||||| |||||||| || ||||||   ||||||| |    
T  3937451 tttcgaattatgtaatccagaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaattcggaaaaactc-gtaactccatttttcatc 3937353  T
Q  228 ctttaacaaaggaaaacatcatttcggattataaaatcc-aaaactttaagggcattttt 286  Q
    || ||||||||||||||| ||||  ||||||||||||||  |||| | ||||||||||||    
T  3937352 ctataacaaaggaaaacaccattctggattataaaatccggaaacctcaagggcattttt 3937293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 134 - 298
Target Start/End: Original strand, 3352168 - 3352332
Alignment:
Q  134 attatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttatttt-ttcacccttta 232  Q
    ||||||||||| | ||| ||||||||| || || |||||||| |  ||||| |||||||||||  ||||||| || || ||| ||||| |||||||||||    
T  3352168 attatgtaatccggaaacatcatgtaacgcaccctatttttttaagtttcctgattacaaaatttggaaaaattc-gttactcatttttttcacccttta 3352266  T
Q  233 acaaaggaaaacatcatttcggattataaaatccaaaactttaagggcattttttgaaaaaatagg 298  Q
    |||||  |||||||||||| |||||||||||||| ||| || || |||||||||  ||||||||||    
T  3352267 acaaaaaaaaacatcattttggattataaaatccgaaaattcaaaggcatttttgaaaaaaatagg 3352332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 152 - 265
Target Start/End: Original strand, 34821516 - 34821628
Alignment:
Q  152 atcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaacatcattt 251  Q
    |||| |||| ||||| ||||||||||  ||||||||||||||||||||| |||| || || ||| ||||||||||||||||||||| ||||||| ||||     
T  34821516 atcaggtaacgcgccctattttttgaagtttccggattacaaaatccgg-aaaattccgttactcattttttcaccctttaacaaaagaaaacaccattc 34821614  T
Q  252 cggattataaaatc 265  Q
    ||||||||| ||||    
T  34821615 cggattatataatc 34821628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 131 - 266
Target Start/End: Original strand, 3902905 - 3903039
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    ||||||||||||||  |||| ||||||||| ||||  ||||||||||  ||| ||||||||||||||||||||||  | ||||||    ||||||||||     
T  3902905 cggattatgtaatccaaaaacatcatgtaacgcgctctattttttgaagttttcggattacaaaatccggaaaaac-cagtaactccacttttcacccta 3903003  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||||||||||| |||| |||||||| ||||||    
T  3903004 taacaaaggaaaacaccattccggattatgaaatcc 3903039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 132 - 266
Target Start/End: Complemental strand, 28873062 - 28872929
Alignment:
Q  132 ggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacccttt 231  Q
    ||||||||||||| | ||| || |||||| ||| | |||||||||| |||| ||||||| ||||||| |||||| || |||||||  ||||||||||| |    
T  28873062 ggattatgtaatccggaaacataatgtaacgcgtcctattttttgaaattttcggattataaaatccagaaaaactc-gtaacttcatttttcaccctat 28872964  T
Q  232 aacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||| ||||||||||| | |||||| ||||||    
T  28872963 aacaaagaaaaacatcattccagattatgaaatcc 28872929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 131 - 266
Target Start/End: Complemental strand, 35142134 - 35142003
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||||||| ||||| || |||||||  |||||||||||||||| ||||||||| || || ||||   |||||||||||    
T  35142134 cggattatgtaatccggaaacatcatgtaacgcgccctaatttttgaagtttccggattacaaaacccggaaaaa-tccgttactt---ttttcaccctt 35142039  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||| || |||| |||| ||||||||| |||||    
T  35142038 taacaaaagataacaccattccggattatataatcc 35142003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 160 - 265
Target Start/End: Complemental strand, 47123137 - 47123033
Alignment:
Q  160 atgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaacatcatttcggattat 259  Q
    ||||||| ||||||||||  ||||||||||||||||| ||||||||  | || ||| ||||||||||||||||||||| |||||||||||| | ||||||    
T  47123137 atgcgccctattttttgaagtttccggattacaaaattcggaaaaaccc-gttactcattttttcaccctttaacaaaagaaaacatcattccagattat 47123039  T
Q  260 aaaatc 265  Q
    | ||||    
T  47123038 ataatc 47123033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 160 - 265
Target Start/End: Complemental strand, 47130503 - 47130399
Alignment:
Q  160 atgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaacatcatttcggattat 259  Q
    ||||||| ||||||||||  ||||||||||||||||| ||||||||  | || ||| ||||||||||||||||||||| |||||||||||| | ||||||    
T  47130503 atgcgccctattttttgaagtttccggattacaaaattcggaaaaaccc-gttactcattttttcaccctttaacaaaagaaaacatcattccagattat 47130405  T
Q  260 aaaatc 265  Q
    | ||||    
T  47130404 ataatc 47130399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 131 - 264
Target Start/End: Complemental strand, 50716312 - 50716180
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| |||||||||  |||| ||||||||||  ||| ||||||||||||||| ||||||| | ||||||   |||||||||||     
T  50716312 cggattatgtaatctggaaacatcatgtaacacgccctattttttgaagttttcggattacaaaatcc-gaaaaaacccgtaactccatttttcacccta 50716214  T
Q  231 taacaaaggaaaacatcatttcggattataaaat 264  Q
    ||||||||||||| | |||| |||||||| ||||    
T  50716213 taacaaaggaaaataccattccggattatgaaat 50716180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 131 - 264
Target Start/End: Original strand, 50796535 - 50796667
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| |||||||||  |||| ||||||||||  ||| ||||||||||||||| ||||||| | ||||||   |||||||||||     
T  50796535 cggattatgtaatctggaaacatcatgtaacacgccctattttttgaagttttcggattacaaaatcc-gaaaaaacccgtaactccatttttcacccta 50796633  T
Q  231 taacaaaggaaaacatcatttcggattataaaat 264  Q
    ||||||||||||| | |||| |||||||| ||||    
T  50796634 taacaaaggaaaataccattccggattatgaaat 50796667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 202 - 333
Target Start/End: Complemental strand, 42936659 - 42936527
Alignment:
Q  202 aaaaatctgtaacttattttttcaccctttaacaaaggaaaacatcatttcggattataaaatcc-aaaactttaagggcattttttgaaaaaatagggc 300  Q
    ||||||| ||||||  |||||||||||||||||||||||||||| |||| |||||||| ||||||  |||||| ||||| |||||  |  |||||||| |    
T  42936659 aaaaatccgtaactccttttttcaccctttaacaaaggaaaacaccattccggattatgaaatccggaaacttcaagggtattttgggggaaaataggac 42936560  T
Q  301 atgcgaggaaagccataagatgggaaaagtaaa 333  Q
     ||||||||||| |||| | | |||||||||||    
T  42936559 gtgcgaggaaagacatagggttggaaaagtaaa 42936527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 131 - 245
Target Start/End: Complemental strand, 39149869 - 39149757
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| |  |||||| ||||| ||||||||||| |||| ||||||||||||||||||||| || ||  || ||||||||||||||    
T  39149869 cggattatgtaatccggaaacactatgtaacgcgccctattttttgag-tttctggattacaaaatccggaaaaa-tccgttgctaattttttcaccctt 39149772  T
Q  231 taacaaaggaaaaca 245  Q
    ||||||| |||||||    
T  39149771 taacaaaagaaaaca 39149757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 218 - 337
Target Start/End: Complemental strand, 33700731 - 33700606
Alignment:
Q  218 ttttttcaccctttaacaaaggaaaacatcatttcggattataaaatcca-aaactttaagggcattttttg-----aaaaaatagggcatgcgaggaaa 311  Q
    |||||||||||||||||||||||||||| |||| |||||||| ||||||| |||||| |||| ||||||| |     |||||||||||| ||||| | |     
T  33700731 ttttttcaccctttaacaaaggaaaacaccattccggattatgaaatccagaaacttcaaggacatttttggaagaaaaaaaatagggcgtgcgaagtat 33700632  T
Q  312 gccataagatgggaaaagtaaatccc 337  Q
      |||| |||||||||||||||||||    
T  33700631 ctcataggatgggaaaagtaaatccc 33700606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 131 - 266
Target Start/End: Original strand, 2358721 - 2358856
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttatttttt-gagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccct 229  Q
    |||||||||||| | | ||| |||||||||  |||| |||||||| ||  ||||||||||||||||||| | |||| || ||||||   |||||||||||    
T  2358721 cggattatgtaagccggaaacatcatgtaacacgccctatttttttgaagtttccggattacaaaatccaggaaaa-tccgtaactccatttttcaccct 2358819  T
Q  230 ttaacaaaggaaaacatcatttcggattataaaatcc 266  Q
     ||||||||||||||| |||| |||||||| ||||||    
T  2358820 ataacaaaggaaaacaccattccggattatgaaatcc 2358856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 266
Target Start/End: Original strand, 30721903 - 30722043
Alignment:
Q  129 ttcggattatgtaatcagaaaaaatcatgtaa---tgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaactta-ttttttc 224  Q
    |||||||||||||||| |||||||||||||||   |||||| ||||||||||  ||| ||||||||||||| |  |||| |||  ||||| | |||||||    
T  30721903 ttcggattatgtaatccgaaaaaatcatgtaatattgcgccctattttttgaagttttcggattacaaaat-ctaaaaacatccataactcatttttttc 30722001  T
Q  225 accctttaacaaaggaaaacatcatttcggattataaaatcc 266  Q
    || || ||||||||||||||| || ||| |||||| ||||||    
T  30722002 actctataacaaaggaaaacaccagttcagattatgaaatcc 30722043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 34821442 - 34821514
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaa 203  Q
    |||||||||||||| ||||| ||||||||| ||||  ||||||||||  ||||||||||||||||| ||||||    
T  34821442 cggattatgtaatccgaaaacatcatgtaacgcgctctattttttgaagtttccggattacaaaattcggaaa 34821514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 250
Target Start/End: Original strand, 501240 - 501358
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    ||||||||| |||| | ||| ||||||||| ||||| ||||||||||  |||  ||||||||||||||||||||| ||  |||||   |||||| ||||     
T  501240 cggattatgcaatccggaaacatcatgtaacgcgccctattttttgaagtttttggattacaaaatccggaaaaactc-ataactccatttttcgcccta 501338  T
Q  231 taacaaaggaaaacatcatt 250  Q
    ||||||||||||||| ||||    
T  501339 taacaaaggaaaacaccatt 501358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 189
Target Start/End: Complemental strand, 32025099 - 32024985
Alignment:
Q  81 attacgtaatccggattgcatcagcaccatgaaaaagatggtgttta------tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttt 174  Q
    ||||||||||||| | |||||||| ||||||||||| ||||||||||       ||| |||| | ||||| ||||||||||| || |||||| |||||||    
T  32025099 attacgtaatccgaactgcatcaggaccatgaaaaaaatggtgtttagggggtgttcagattctataatccgaaaaaatcatatagtgcgccctattttt 32025000  T
Q  175 tgagatttccggatt 189  Q
    |||||||| ||||||    
T  32024999 tgagattttcggatt 32024985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 270
Target Start/End: Original strand, 28830237 - 28830329
Alignment:
Q  177 agatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaacatcatttcggattataaaatccaaaa 270  Q
    ||||||| | ||||||||||||  ||||||||  ||| | |||||||||||||||||||||  |||||| ||||||  ||||||||||||||||    
T  28830237 agatttctgaattacaaaatcca-aaaaaatccataattcattttttcaccctttaacaaaaaaaaacaccatttcaaattataaaatccaaaa 28830329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 205
Target Start/End: Original strand, 44085462 - 44085595
Alignment:
Q  79 ggattacgtaatccggattgcatcagcaccatg-aaaaagatggtgttta-----tttcggattatgtaatcagaaaaaatcatgtaatgcgcctta-tt 171  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||||||||||      |||||||||||||||| ||| |||| ||||||  | || || ||    
T  44085462 ggattacgtaatctggattgcatcagcaccatgaaaaaaaatggtgtttagggctgttcggattatgtaatctgaagaaattatgtaacacaccctattt 44085561  T
Q  172 ttttgagatttccggattacaaaatccggaaaaa 205  Q
    |||||||||||   ||||||| ||| ||||||||    
T  44085562 ttttgagatttttagattacataattcggaaaaa 44085595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 416 - 561
Target Start/End: Original strand, 46749414 - 46749557
Alignment:
Q  416 aattaggatttctcacaacttataaaatgtccttcggtatt-caaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacattt 514  Q
    ||||| |||||||||||||||||||||||||  | | ||||  ||||||| ||||||||| |||||   | ||||||||| || |||||| ||||| |||    
T  46749414 aattaagatttctcacaacttataaaatgtctgttgctattaaaaaaattaatagattttgatgga---ttttttatggagtggattttgagagactttt 46749510  T
Q  515 tggttaaaaatgtgaataatatgctcattcaacaatctcacaaaaat 561  Q
    |  |||||||||| || |   | |||||| |||||||||||||||||    
T  46749511 taattaaaaatgtcaacacacttctcatttaacaatctcacaaaaat 46749557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 337
Target Start/End: Original strand, 33701462 - 33701622
Alignment:
Q  180 tttccggattacaaaatccggaaaaaatctgtaacttatttttt--caccctttaacaaaggaaaacatcatttcggattataaaatcc-aaaactttaa 276  Q
    ||||||||||||  |||||||||||| || |||||| |||||||  |||| ||||||||||||||||| ||||  ||||||  ||||||  |||| | ||    
T  33701462 tttccggattacgtaatccggaaaaattc-gtaactcattttttttcaccttttaacaaaggaaaacaccattctggattacgaaatccggaaacgtcaa 33701560  T
Q  277 gggcattttt-tgaaaaaatagggcatgcgaggaaagccataagatgggaaaagtaaatccc 337  Q
     |||||||||   |||||||||| |  || ||||||| |||| | |||||||||||||||||    
T  33701561 aggcatttttaaaaaaaaataggacgcgcaaggaaagtcatagggtgggaaaagtaaatccc 33701622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 210 - 264
Target Start/End: Original strand, 42937122 - 42937176
Alignment:
Q  210 gtaacttattttttcaccctttaacaaaggaaaacatcatttcggattataaaat 264  Q
    |||||| ||||||||||||||||||||||| ||| | ||||||||||||| ||||    
T  42937122 gtaactcattttttcaccctttaacaaagggaaataccatttcggattatgaaat 42937176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 45244713 - 45244675
Alignment:
Q  78 cggattacgtaatccggattgcatcagcaccatgaaaaa 116  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  45244713 cggattacgtaatccggattgcattagcaccatgaaaaa 45244675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 250
Target Start/End: Original strand, 46622885 - 46623002
Alignment:
Q  133 gattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggatt-acaaaatccggaaaaaatctgtaacttattttttcacccttt 231  Q
    |||||||||||| | ||| ||||||||| | | | ||||||||||  ||||||| || | |||||||||||||| || || ||| ||||||||| | |||    
T  46622885 gattatgtaatccggaaacatcatgtaacgtgtcctattttttgaagtttccggttttataaaatccggaaaaa-tccgttactcattttttcatcattt 46622983  T
Q  232 aacaaaggaaaacatcatt 250  Q
    |||||| ||||||||||||    
T  46622984 aacaaaagaaaacatcatt 46623002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 48304596 - 48304558
Alignment:
Q  78 cggattacgtaatccggattgcatcagcaccatgaaaaa 116  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  48304596 cggattacgtaatccgaattgcatcagcaccatgaaaaa 48304558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 4394209 - 4394161
Alignment:
Q  217 attttttcaccctttaacaaaggaaaacatcatttcggattataaaatc 265  Q
    ||||||||||||||||||||| |||||||||||| | ||||||| ||||    
T  4394209 attttttcaccctttaacaaaagaaaacatcattccagattatataatc 4394161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 8735145 - 8735097
Alignment:
Q  218 ttttttcaccctttaacaaaggaaaacatcatttcggattataaaatcc 266  Q
    |||||||||||||||||||||||||||| |||| || ||||| ||||||    
T  8735145 ttttttcaccctttaacaaaggaaaacaccattccgaattatgaaatcc 8735097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 9087386 - 9087338
Alignment:
Q  218 ttttttcaccctttaacaaaggaaaacatcatttcggattataaaatcc 266  Q
    |||||||||||||||||||||||||||| |||| || ||||| ||||||    
T  9087386 ttttttcaccctttaacaaaggaaaacaccattccgaattatgaaatcc 9087338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 3e-66; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 78 - 335
Target Start/End: Complemental strand, 25715479 - 25715219
Alignment:
Q  78 cggattacgtaatccggattgcatcagcaccatgaaaaagatggtgtttat-ttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttg 176  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||| |||||||||| |||| ||||| ||| |||||    
T  25715479 cggattacgtaatccggattgcatcagcaccatgaaaaaaatggtgtttgtgttcggattatgtaatccgaaaaaatcaggtaacgcgccctatcttttg 25715380  T
Q  177 agatttccggattacaaaatccggaaaaaa-tctgtaacttattttttcaccctttaacaaaggaaaacatcatttcggattataaaatcc-aaaacttt 274  Q
    ||||||  |||||||||| |||| |||||| | ||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||  ||||||     
T  25715379 agatttttggattacaaagtccgaaaaaaaatttgtaactcattttttcaccctttaacaaaggaaaacaccattccggattataaaatccggaaacttc 25715280  T
Q  275 aagggcattttttgaaaaaatagggcatgcgaggaaagccataagatgggaaaagtaaatc 335  Q
    ||||||||||||  ||||||||||||  |  ||||||| |||| | |||||||| ||||||    
T  25715279 aagggcatttttgaaaaaaatagggcgcgttaggaaagacatagggtgggaaaaataaatc 25715219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 416 - 613
Target Start/End: Original strand, 37981785 - 37981977
Alignment:
Q  416 aattaggatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacatttt 515  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||  |||||||||||||||  | |||||||||| ||||    
T  37981785 aattaggatttctcacaacttataaaatgtccttaggtattcaaaaattgatagattttgatgg--attcttttatggaatagaatttgtgagac-tttt 37981881  T
Q  516 ggttaaaaatgtgaataatatgctcattcaacaatctcacaaaaattggtgagactctcacaattttcttttccgtgttgtccaacaagagtcatttt 613  Q
      ||||||||||||| || |||||||||||||||||||||| ||||| ||||||  |||||||||||||||||| || |||||||| ||| |||||||    
T  37981882 aattaaaaatgtgaacaaaatgctcattcaacaatctcacacaaatttgtgaga--ctcacaattttcttttccttgctgtccaacgagattcatttt 37981977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 80 - 286
Target Start/End: Original strand, 9847462 - 9847674
Alignment:
Q  80 gattacgtaatccggattgcatcagcaccatgaaaaagatggtgttt--at----ttcggattatgtaatcagaaaaaatcatgtaatgcgccttatttt 173  Q
    ||||||||||||| ||||||||||||||||||||||| | |||||||  ||    |||||||||||||||  ||||||||||||||| |||||  |||||    
T  9847462 gattacgtaatccagattgcatcagcaccatgaaaaaaaaggtgtttggatggtgttcggattatgtaatacgaaaaaatcatgtaacgcgcccaatttt 9847561  T
Q  174 ttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaacatcatttcggattataaaatcc-aaaact 272  Q
    ||||||||| |||||||||||||| || ||||||| |||||| |||||||||| ||||||||||| ||||   |||| | |||||||||||||  |||||    
T  9847562 ttgagattttcggattacaaaatctgg-aaaaatcagtaactcattttttcactctttaacaaagaaaaatgccattccagattataaaatccggaaact 9847660  T
Q  273 ttaagggcattttt 286  Q
    | || |||||||||    
T  9847661 tcaaaggcattttt 9847674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 131 - 267
Target Start/End: Original strand, 25217884 - 25218019
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||||||| || || ||||||||||  |||||||||||||||||||| |||||||| || ||| ||||||||||||||    
T  25217884 cggattatgtaatccggaaacatcatgtaacgcaccctattttttgaagtttccggattacaaaatccg-aaaaaatccgttactcattttttcaccctt 25217982  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcca 267  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  25217983 taacaaaagaaaacatcattgcggattataaaatcca 25218019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 133 - 250
Target Start/End: Complemental strand, 39447220 - 39447104
Alignment:
Q  133 gattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacccttta 232  Q
    |||||||||||| ||||| ||||||||||||||| ||||||||||  ||| |||||||||||||||||| |||||| || ||| ||||||||||||||||    
T  39447220 gattatgtaatccgaaaacatcatgtaatgcgccctattttttgaagttttcggattacaaaatccgga-aaaatccgttactcattttttcacccttta 39447122  T
Q  233 acaaaggaaaacatcatt 250  Q
    ||||| ||||||||||||    
T  39447121 acaaaagaaaacatcatt 39447104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 128 - 286
Target Start/End: Original strand, 15995204 - 15995362
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttatttttt-gagatttccggattacaaaatccggaaaaaatctgtaacttattttttcac 226  Q
    ||||||||||||||||| | ||| |||||| || ||||| |||||||| ||  ||||| ||||||||||||||||||||  | || ||| ||||||||||    
T  15995204 tttcggattatgtaatccggaaacatcatgcaacgcgccctatttttttgaagtttcccgattacaaaatccggaaaaaccc-gttactaattttttcac 15995302  T
Q  227 cctttaacaaaggaaaacatcatttcggattataaaatccaaaactttaagggcattttt 286  Q
    ||||||||||| ||||||| |||| ||||||||||||||| |||  | ||||||||||||    
T  15995303 cctttaacaaaagaaaacaccattccggattataaaatccgaaaactaaagggcattttt 15995362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 131 - 266
Target Start/End: Original strand, 33452537 - 33452671
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||| ||| | ||| ||||||||| ||||| ||||||||||  |||||| |||||||||||| |||||| || || ||| |||||| |||||||    
T  33452537 cggattatgtgatccggaaacatcatgtaacgcgccctattttttgaagtttccgaattacaaaatccagaaaaa-tccgttactcatttttccaccctt 33452635  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||| |||||||||||||||||||||| |||||    
T  33452636 taacaaaagaaaacatcatttcggattatataatcc 33452671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 132 - 286
Target Start/End: Complemental strand, 34517159 - 34517006
Alignment:
Q  132 ggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacccttt 231  Q
    ||||||||||||| |||||| |||||||| ||||| |||||||||||||||   ||||||||||||| ||||||||  |||||| ||||||||||| | |    
T  34517159 ggattatgtaatccgaaaaa-tcatgtaacgcgccctattttttgagatttttcgattacaaaatcc-gaaaaaattcgtaactcattttttcaccgtat 34517062  T
Q  232 aacaaaggaaaacatcatttcggattataaaatcc-aaaactttaagggcattttt 286  Q
    |||||||||||||| || |||||| ||| |||||| ||||||| || |||||||||    
T  34517061 aacaaaggaaaacaccagttcggaatatgaaatccgaaaacttcaaaggcattttt 34517006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 753 - 831
Target Start/End: Complemental strand, 1533822 - 1533744
Alignment:
Q  753 aaaccctcaatttacaagatgtagtcggtcagggtggtggtgcgacgagtgacaccagtcctccgcaccacctctaaac 831  Q
    |||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||    
T  1533822 aaaccctcaatttacaagatgtagccggtcagggtgatggtgcgatgagtgacaccagtcctccgcgccacctctaaac 1533744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 131 - 265
Target Start/End: Original strand, 36949039 - 36949172
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| ||||| ||||||||| ||||| ||||||||||  ||| | ||||||||||||||| ||||||| ||||||   |||||||||||     
T  36949039 cggattatgtaatccgaaaacatcatgtaacgcgccctattttttgaagtttgcagattacaaaatccgg-aaaaatccgtaactccatttttcacccta 36949137  T
Q  231 taacaaaggaaaacatcatttcggattataaaatc 265  Q
    ||||||||||||||| |||| |||||||| |||||    
T  36949138 taacaaaggaaaacaccattccggattatgaaatc 36949172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 152 - 266
Target Start/End: Original strand, 44465843 - 44465956
Alignment:
Q  152 atcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaacatcattt 251  Q
    ||||||||| ||||| ||||||||||  ||||||||||||||||||||| ||||||| || ||| ||||||||||||||||||||| ||||||||||||     
T  44465843 atcatgtaacgcgccctattttttgaagtttccggattacaaaatccgg-aaaaatccgttactcattttttcaccctttaacaaaagaaaacatcattc 44465941  T
Q  252 cggattataaaatcc 266  Q
     |||||||| |||||    
T  44465942 tggattatataatcc 44465956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 129 - 286
Target Start/End: Complemental strand, 5507480 - 5507321
Alignment:
Q  129 ttcggattatgtaatcagaaaaaa--tcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcac 226  Q
    |||||||||| ||||| |||||||  |||||||| ||| ||||||||||||  |||  |||||||||||| || ||||||||||||||| ||||||||||    
T  5507480 ttcggattatataatccgaaaaaaaatcatgtaacgcgtcttattttttgaagtttttggattacaaaattcg-aaaaaatctgtaactcattttttcac 5507382  T
Q  227 cctttaacaaaggaaaacatcatttcggattataaaatcc-aaaactttaagggcattttt 286  Q
    | | |||||||||||||||  | |||||||||| ||| || ||||||| ||||||||||||    
T  5507381 catataacaaaggaaaacactagttcggattatgaaacccgaaaacttcaagggcattttt 5507321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 131 - 266
Target Start/End: Original strand, 45153885 - 45154019
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||||||| ||||| ||||||||||  ||||| ||||||||||| | ||||||  | || ||| ||||||||||||||    
T  45153885 cggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccagattacaaaattcagaaaaaccc-gttactcattttttcaccctt 45153983  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||| |||||||||||| ||||||||| |||||    
T  45153984 taacaaaagaaaacatcattccggattatataatcc 45154019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 131 - 246
Target Start/End: Original strand, 17474893 - 17475007
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||||||| ||||| |||||||| |  ||||||||||||||||||||| ||||||| || ||| ||||||||||| ||    
T  17474893 cggattatgtaatccggaaacatcatgtaacgcgccctattttttaaagtttccggattacaaaatccgg-aaaaatccgttactcattttttcaccttt 17474991  T
Q  231 taacaaaggaaaacat 246  Q
    ||||||| ||||||||    
T  17474992 taacaaaagaaaacat 17475007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 131 - 332
Target Start/End: Original strand, 32187963 - 32188167
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaactta-ttttttcaccct 229  Q
    |||||||||||||| | ||| |||||||||  |||| ||||||||||  ||||| ||||||||||||| | ||||| | || ||| | ||||||||||||    
T  32187963 cggattatgtaatccggaaacatcatgtaactcgccctattttttgaagtttccagattacaaaatccag-aaaaacccgttactcatttttttcaccct 32188061  T
Q  230 ttaacaaaggaaaacatcatttcggattataaaatcc--aaaactttaaggg-cattttttgaaaaaatagggcatgcgaggaaagccataagatgggaa 326  Q
    |||||||| |||||||||||| ||||||||| |||||  ||  ||   ||||  |||||   |||||||||||| ||||||||||| |||||| ||||||    
T  32188062 ttaacaaaagaaaacatcattccggattatacaatccggaatgctccgagggtaattttgaaaaaaaatagggcgtgcgaggaaagacataaggtgggaa 32188161  T
Q  327 aagtaa 332  Q
    ||||||    
T  32188162 aagtaa 32188167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 133 - 260
Target Start/End: Original strand, 41510524 - 41510651
Alignment:
Q  133 gattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaactta-ttttttcacccttt 231  Q
    ||||||||||||   ||| ||||||||| ||||| ||||||||||  |||||||||||| ||||| || ||||||| || ||| | ||||||||||||||    
T  41510524 gattatgtaatccagaaacatcatgtaacgcgccctattttttgaagtttccggattacgaaatctgg-aaaaatccgttactcatttttttcacccttt 41510622  T
Q  232 aacaaaggaaaacatcatttcggattata 260  Q
     ||||| ||||||| ||||||||||||||    
T  41510623 tacaaaagaaaacaccatttcggattata 41510651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 36875045 - 36874977
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccg 199  Q
    |||||||||||||| | ||| ||||||||| ||| | ||||||||||  ||||||||||||||||||||    
T  36875045 cggattatgtaatccggaaacatcatgtaacgcgtcctattttttgaagtttccggattacaaaatccg 36874977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 434 - 560
Target Start/End: Complemental strand, 18176371 - 18176247
Alignment:
Q  434 cttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacattttggttaaaaatgtgaataa 533  Q
    |||||||||||||  | ||||||||||| |    ||||||||||||||  ||| || | || || |||||||||||| |||| |||||||||    || |    
T  18176371 cttataaaatgtctattggtattcaaaattcttgagattttaatggat--tctattgtagagtggattttgtgagactttttagttaaaaatacacatga 18176274  T
Q  534 tatgctcattcaacaatctcacaaaaa 560  Q
    |||||||||||||||||||||||||||    
T  18176273 tatgctcattcaacaatctcacaaaaa 18176247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 4268332 - 4268406
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaa 205  Q
    |||||||||||||| | ||| ||||||||| ||||| ||||||||||  |||  ||||||||||||||| |||||    
T  4268332 cggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttttggattacaaaatccgaaaaaa 4268406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 25715679 - 25715641
Alignment:
Q  78 cggattacgtaatccggattgcatcagcaccatgaaaaa 116  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  25715679 cggattacgtaatccggattgcatctgcaccatgaaaaa 25715641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 9847254 - 9847290
Alignment:
Q  80 gattacgtaatccggattgcatcagcaccatgaaaaa 116  Q
    ||||||||||||||||||||||||||||||| |||||    
T  9847254 gattacgtaatccggattgcatcagcaccataaaaaa 9847290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 416 - 560
Target Start/End: Complemental strand, 15284448 - 15284304
Alignment:
Q  416 aattaggatttctcacaacttataaaatgtccttcggtatt-caaaaattgatagattttaatggatattcttttatggaatgaattttgtgag-acatt 513  Q
    ||||| |||||||||  |||||| || ||||  | |||||| ||||| || ||||||||||||||||  |||||| |  |||| |||||||||| || ||    
T  15284448 aattaagatttctcatgacttatgaattgtctattggtattacaaaagtttatagattttaatggat--tcttttgtacaatggattttgtgagtacttt 15284351  T
Q  514 ttggttaaaaatgtgaataatatgctcattcaacaatctcacaaaaa 560  Q
    || |||||||||    || | ||||||||||||||||||||||||||    
T  15284350 ttagttaaaaatacacatgacatgctcattcaacaatctcacaaaaa 15284304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 33366990 - 33366920
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccg 199  Q
    ||||||||||||||||| | ||| ||||||||| ||| |||| |||||||  ||| ||||||||||||||||    
T  33366990 tttcggattatgtaatccggaaatatcatgtaacgcgtctta-tttttgaagttttcggattacaaaatccg 33366920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 41855054 - 41855117
Alignment:
Q  203 aaaatctgtaacttattttttcaccctttaacaaaggaaaacatcatttcggattataaaatcc 266  Q
    |||||| || ||| ||||||||||||||||||||  ||||||| |||| ||||||||| |||||    
T  41855054 aaaatccgttactcattttttcaccctttaacaacagaaaacaccattccggattatataatcc 41855117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 34519578 - 34519615
Alignment:
Q  79 ggattacgtaatccggattgcatcagcaccatgaaaaa 116  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  34519578 ggattacgtaatccggactacatcagcaccatgaaaaa 34519615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 1e-62; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 416 - 601
Target Start/End: Complemental strand, 37370807 - 37370624
Alignment:
Q  416 aattaggatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacatttt 515  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||| || |    
T  37370807 aattaagatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggat--tcttttatggaatggattttgtgagactttat 37370710  T
Q  516 ggttaaaaatgtgaataatatgctcattcaacaatctcacaaaaattggtgagactctcacaattttcttttccgtgttgtccaac 601  Q
     |||||||||||||| || || ||||||||||||| ||||||||||| || |||||| ||||||||||||||||||| ||||||||    
T  37370709 agttaaaaatgtgaacaaaatactcattcaacaatttcacaaaaatttgtaagactcccacaattttcttttccgtgatgtccaac 37370624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 416 - 613
Target Start/End: Original strand, 53594250 - 53594441
Alignment:
Q  416 aattaggatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacatttt 515  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||  ||| |||||||||||| |||||||||||| ||||    
T  53594250 aattaggatttctcacaacttataaaatgtctttcggtattaaaaaattgatagattttgatgg--atttttttatggaatggattttgtgagacttttt 53594347  T
Q  516 ggttaaaaatgtgaataatatgctcattcaacaatctcacaaaaattggtgagactctcacaattttcttttccgtgttgtccaacaagagtcatttt 613  Q
    | ||||||||||||| || |||||||||||  ||||||| | ||||| ||||||  |||||||||||||||||| || |||||||| ||| |||||||    
T  53594348 gattaaaaatgtgaacaaaatgctcattca--aatctcagacaaatttgtgaga--ctcacaattttcttttccttgctgtccaacgagattcatttt 53594441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 416 - 571
Target Start/End: Complemental strand, 28100502 - 28100349
Alignment:
Q  416 aattaggatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacatttt 515  Q
    ||||| ||||||||||||||||||||||||| ||  ||||||||||||| ||||||||| ||||  |||||||||||||||| |||||| ||||| ||||    
T  28100502 aattaagatttctcacaacttataaaatgtcttttagtattcaaaaattaatagattttgatgg--attcttttatggaatggattttgagagacttttt 28100405  T
Q  516 ggttaaaaatgtgaataatatgctcattcaacaatctcacaaaaattggtgagact 571  Q
     |||||||||||||| |   | ||||||||||||||||||||||||  ||||||||    
T  28100404 agttaaaaatgtgaacacactactcattcaacaatctcacaaaaatgtgtgagact 28100349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 129 - 296
Target Start/End: Original strand, 3703347 - 3703514
Alignment:
Q  129 ttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccc 228  Q
    |||| ||||||||||| |||||||||||||||  || | ||||||||||  ||| |||||||||||||||| |||||||| |||||| ||||||||||||    
T  3703347 ttcgaattatgtaatccgaaaaaatcatgtaacacgtcctattttttgaagttttcggattacaaaatccg-aaaaaatccgtaactcattttttcaccc 3703445  T
Q  229 tttaacaaaggaaaacatcatttcggattataaaatcc-aaaactttaagggcattttttgaaaaaata 296  Q
    | |||||||||||||||  | |||||||||| ||||||  |||||| |||||||||||| ||| |||||    
T  3703446 tataacaaaggaaaacactagttcggattatgaaatccggaaacttcaagggcatttttggaagaaata 3703514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 131 - 294
Target Start/End: Complemental strand, 38536238 - 38536076
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| |||||||||  |||| ||||||||||  |||||| ||||||||||||||| |||| | |||||||  |||||||||||     
T  38536238 cggattatgtaatctggaaacatcatgtaacacgccctattttttgaagtttccgaattacaaaatccgga-aaaacccgtaacttcatttttcacccta 38536140  T
Q  231 taacaaaggaaaacatcatttcggattataaaatccaaaactttaagggcattttttgaaaaaa 294  Q
    ||||||||||||||| ||||||||||||| ||||||  || |  |||||||||||| |||||||    
T  38536139 taacaaaggaaaacaccatttcggattatgaaatccggaaatgcaagggcatttttggaaaaaa 38536076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 132 - 296
Target Start/End: Complemental strand, 23523973 - 23523809
Alignment:
Q  132 ggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacccttt 231  Q
    ||||||||||||| | ||| ||||||||| ||| | ||||||||||  ||||||||||||||||||| ||||||||| ||||||   ||||||||||| |    
T  23523973 ggattatgtaatccggaaacatcatgtaacgcgtcctattttttgaagtttccggattacaaaatcc-gaaaaaatccgtaactccatttttcaccctct 23523875  T
Q  232 aacaaaggaaaacatcatttcggattataaaatcc-aaaactttaagggcattttttgaaaaaata 296  Q
    ||||||||||||||||||| || ||||| |||||| ||||  | ||||||||||||  ||||||||    
T  23523874 aacaaaggaaaacatcattccgaattatgaaatcctaaaatctcaagggcatttttgaaaaaaata 23523809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 131 - 260
Target Start/End: Original strand, 25491494 - 25491622
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||||||| ||| | ||||||||||  |||||||||||||||||||| ||||| || || ||| ||||||||||||||    
T  25491494 cggattatgtaatccggaaacatcatgtaacgcgtcctattttttgaagtttccggattacaaaatccgaaaaaactc-gttactcattttttcaccctt 25491592  T
Q  231 taacaaaggaaaacatcatttcggattata 260  Q
    ||||||| |||||||||||| |||||||||    
T  25491593 taacaaaagaaaacatcattccggattata 25491622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 128 - 332
Target Start/End: Original strand, 48319161 - 48319365
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacc 227  Q
    |||||||||||||||||   ||| ||||||||| ||||| ||||||||||  |||||||||||| |||||||| ||||||| || ||| |||||||||||    
T  48319161 tttcggattatgtaatccagaaacatcatgtaacgcgccctattttttgaagtttccggattac-aaatccgg-aaaaatccgtcactcattttttcacc 48319258  T
Q  228 ctttaacaaaggaaaacatcatttcggattataaaatcc--aaaactttaagggcattttttgaaaaaatagggcatgcgaggaaagccataagatggga 325  Q
    |||||||||| ||||||||||||  |||||| | |||||  ||  |||  |||| | |||| |||||||||||||  |||||||||  |||| | |||||    
T  48319259 ctttaacaaaagaaaacatcattgtggattaaataatccggaatgcttcgagggtaattttggaaaaaatagggcgcgcgaggaaatacatagggtggga 48319358  T
Q  326 aaagtaa 332  Q
    |||||||    
T  48319359 aaagtaa 48319365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 128 - 266
Target Start/End: Original strand, 25752540 - 25752680
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaactta-ttttttcac 226  Q
    ||||||||||||||||| | ||| ||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||  | ||| | |||||||||    
T  25752540 tttcggattatgtaatctggaaacatcatgtaatgcgccctattttttgaaatttccggattacaaaatccgg-aaaaatccattactcatttttttcac 25752638  T
Q  227 cctttaac--aaaggaaaacatcatttcggattataaaatcc 266  Q
    | ||||||  |||  ||||||||||| |||||||||||||||    
T  25752639 cttttaacaaaaaaaaaaacatcattccggattataaaatcc 25752680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 131 - 266
Target Start/End: Complemental strand, 19835588 - 19835454
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||||||| || || |||||||  |  ||||||||||||||||||||||||||  | || ||| ||||||||||||||    
T  19835588 cggattatgtaatccggaaacatcatgtaacgcaccctatttttcaaagtttccggattacaaaatccggaaaaaccc-gttactcattttttcaccctt 19835490  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||| |||||||||||| ||||||||| |||||    
T  19835489 taacaaaagaaaacatcattccggattatataatcc 19835454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 149 - 294
Target Start/End: Original strand, 50392526 - 50392672
Alignment:
Q  149 aaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaactta-ttttttcaccctttaacaaaggaaaacatc 247  Q
    |||||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||| |||||| | ||||||||| |||||||||||||||||| |    
T  50392526 aaaatcatgtaacgcgccccattttttgagatttccggattacaaaatccgg-aaaaatccgtaactcatttttttcactctttaacaaaggaaaacacc 50392624  T
Q  248 atttcggattataaaatcc-aaaactttaagggcattttttgaaaaaa 294  Q
     || |||||||  ||||||  |||| | || ||||||||| |||||||    
T  50392625 gttccggattactaaatccggaaacctcaaaggcatttttcgaaaaaa 50392672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 131 - 266
Target Start/End: Original strand, 54631562 - 54631696
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||||||| ||||| || |||||||  ||||||||||||||||||||| ||||| | || ||| |||||| |||||||    
T  54631562 cggattatgtaatccggaaacatcatgtaacgcgccatactttttgaagtttccggattacaaaatccgg-aaaaacccgttactcatttttccaccctt 54631660  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||| |||||| ||||| ||||||||| |||||    
T  54631661 taacaaaagaaaacgtcattccggattatataatcc 54631696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 135 - 260
Target Start/End: Complemental strand, 40703728 - 40703603
Alignment:
Q  135 ttatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttatt-ttttcaccctttaa 233  Q
    |||||||||| | ||| |||||||||||| || |||||||||| ||||||||||||||||||||||| |||||| || ||| ||| ||||||||||||||    
T  40703728 ttatgtaatccggaaacatcatgtaatgcaccctattttttgaaatttccggattacaaaatccgga-aaaatccgttactcattcttttcaccctttaa 40703630  T
Q  234 caaaggaaaacatcatttcggattata 260  Q
     ||| |||||||||||| | |||||||    
T  40703629 aaaaagaaaacatcattccagattata 40703603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 128 - 266
Target Start/End: Complemental strand, 49397079 - 49396942
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacc 227  Q
    |||||||||||||||||  |||| ||| ||||| ||  | ||||||||||  |||||||||||||||||||||| |||||| ||||||   |||||||||    
T  49397079 tttcggattatgtaatccaaaaacatcttgtaacgcatcctattttttgaagtttccggattacaaaatccgga-aaaatccgtaactccatttttcacc 49396981  T
Q  228 ctttaacaaaggaaaacatcatttcggattataaaatcc 266  Q
    || ||| |||||||||||||||| |||||||| ||||||    
T  49396980 ctataataaaggaaaacatcattccggattatgaaatcc 49396942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 129 - 285
Target Start/End: Complemental strand, 38416635 - 38416479
Alignment:
Q  129 ttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccc 228  Q
    |||||||||||||||| ||||||||||||||| | ||| |||||||| |  |||||||||||||||||   ||||||||| | |||| ||||||||||||    
T  38416635 ttcggattatgtaatccgaaaaaatcatgtaacgtgccctatttttttatgtttccggattacaaaat-ttgaaaaaatccgcaactcattttttcaccc 38416537  T
Q  229 tttaacaaaggaaaacatcatttcggattat-aaaatccaaaactttaagggcatttt 285  Q
    | ||||||||||||||| |  ||| |||||| ||| || ||||||| |||| ||||||    
T  38416536 tataacaaaggaaaacacctattcagattatgaaattcgaaaacttcaaggacatttt 38416479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 131 - 332
Target Start/End: Original strand, 2506130 - 2506333
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgcc-ttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttatttt-ttcaccc 228  Q
    |||||||||||||| | ||| ||||||||| ||||| |||||||||||  |||| | || |||||||  ||||||| || || ||| ||||| |||||||    
T  2506130 cggattatgtaatccggaaacatcatgtaacgcgcccttattttttgatgtttctgaatcacaaaatttggaaaaa-tccgttactcatttttttcaccc 2506228  T
Q  229 tttaacaaaggaaaacatca-tttcggattataaaatccaaaactttaagggcattttttgaaaaaatagggcatgcgaggaaagccataagatgggaaa 327  Q
    ||||||||| |||||||||| |||| |||||||||||||  ||  | ||||||||||||  ||| ||||||||  ||||||||| ||||| ||||| |||    
T  2506229 tttaacaaaagaaaacatcattttctgattataaaatccggaaactcaagggcatttttgaaaacaatagggcgcgcgaggaaatccataggatggaaaa 2506328  T
Q  328 agtaa 332  Q
    |||||    
T  2506329 agtaa 2506333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 42660430 - 42660562
Alignment:
Q  205 aatctgtaacttattttttcaccctttaacaaaggaaaacatcatttcggattataaaatcc-aaaactttaagggcattttttgaaaaa-atagggcat 302  Q
    |||| |||||| |||||||||||||||||||||||||||||  |||  ||||||||||||||  |||||| ||||| |||||| |||||| |||||||      
T  42660430 aatccgtaactcattttttcaccctttaacaaaggaaaacactattctggattataaaatccggaaacttcaagggtatttttggaaaaatatagggcgc 42660529  T
Q  303 gcgaggaaagccataagatgggaaaagtaaatc 335  Q
    |||||||||| ||||  ||||||||||||||||    
T  42660530 gcgaggaaaggcatagaatgggaaaagtaaatc 42660562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 131 - 266
Target Start/End: Complemental strand, 32441879 - 32441745
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||||||| ||||  ||||||||||  ||||||||||||||||||| | |||||||  |||||   |||||||||||     
T  32441879 cggattatgtaatccggaaacatcatgtaacgcgcgctattttttgaagtttccggattacaaaatccag-aaaaatccttaactccatttttcacccta 32441781  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||||||||||| |||| |||||||| ||||||    
T  32441780 taacaaaggaaaacaccattccggattatgaaatcc 32441745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 133 - 266
Target Start/End: Original strand, 17933238 - 17933370
Alignment:
Q  133 gattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacccttta 232  Q
    |||||||||||| | ||| ||||||||| ||||| ||||||||||  |||| ||||||||||||| || ||||||| || | | |||||| |||||||||    
T  17933238 gattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttctggattacaaaatctgg-aaaaatccgttattcatttttgcacccttta 17933336  T
Q  233 acaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||| |||||||||||| | ||||||| |||||    
T  17933337 acaaaagaaaacatcattccagattatataatcc 17933370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 131 - 246
Target Start/End: Complemental strand, 7931726 - 7931612
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| || |||||| ||||| ||||||||||  |||||||||| ||||||||||| |||| | || ||| ||||||||||||||    
T  7931726 cggattatgtaatccggaaacataatgtaacgcgccctattttttgaagtttccggattgcaaaatccgga-aaaacccgttactcattttttcaccctt 7931628  T
Q  231 taacaaaggaaaacat 246  Q
    ||||||| ||||||||    
T  7931627 taacaaaagaaaacat 7931612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 29822687 - 29822577
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| ||||| ||||||||| ||||  ||||||||||  |||||||||||||||||||||| |||| | ||||||   |||||||||||     
T  29822687 cggattatgtaatccgaaaacatcatgtaacgcgctgtattttttgaagtttccggattacaaaatccgga-aaaacccgtaactccatttttcacccta 29822589  T
Q  231 taacaaaggaaa 242  Q
    ||||||||||||    
T  29822588 taacaaaggaaa 29822577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 152 - 266
Target Start/End: Original strand, 6228931 - 6229044
Alignment:
Q  152 atcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaacatcattt 251  Q
    ||||||||| ||||| ||||||||||  ||||||| ||||||||||||| ||||||| ||| ||   ||||||||||| ||||||||||||||| ||||     
T  6228931 atcatgtaacgcgccctattttttgaagtttccgggttacaaaatccgg-aaaaatccgtagctccatttttcaccctataacaaaggaaaacaccattc 6229029  T
Q  252 cggattataaaatcc 266  Q
    |||||||| ||||||    
T  6229030 cggattatgaaatcc 6229044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 416 - 557
Target Start/End: Original strand, 41762142 - 41762281
Alignment:
Q  416 aattaggatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacatttt 515  Q
    ||||||||||||||||||||||||||||||| || |||||| |||| || || ||| || |||   ||||||||||||| || ||||||||| |  ||||    
T  41762142 aattaggatttctcacaacttataaaatgtcttttggtatttaaaattttatggatattgatg--aattcttttatggagtggattttgtgaaatttttt 41762239  T
Q  516 ggttaaaaatgtgaataatatgctcattcaacaatctcacaa 557  Q
     |||||||||||||| |  || || |||||||||||||||||    
T  41762240 agttaaaaatgtgaacacaatacttattcaacaatctcacaa 41762281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 152 - 260
Target Start/End: Original strand, 53894111 - 53894218
Alignment:
Q  152 atcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaacatcattt 251  Q
    ||||||||| ||||| ||||||||||  ||||| |||| |||||||||||||||  | || | | ||||||||||||||||||||| ||||||||||||     
T  53894111 atcatgtaacgcgccctattttttgaagtttcctgattgcaaaatccggaaaaaccc-gttagtcattttttcaccctttaacaaaagaaaacatcattc 53894209  T
Q  252 cggattata 260  Q
    |||||||||    
T  53894210 cggattata 53894218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 131 - 266
Target Start/End: Original strand, 25539047 - 25539181
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    ||||||||||||||   ||| |||||||||   ||| ||||||||||  ||||||||||||||||||||| ||||| | ||||||   ||||||||| |     
T  25539047 cggattatgtaatccagaaacatcatgtaacatgccctattttttgaagtttccggattacaaaatccgg-aaaaacccgtaactccatttttcaccata 25539145  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||||||||||| |||| |||||||| ||||||    
T  25539146 taacaaaggaaaacaccattccggattatgaaatcc 25539181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 131 - 266
Target Start/End: Original strand, 55052718 - 55052852
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||| ||||| | ||| ||||| |||  |||| ||||||||||  ||||||||||||| ||||||||||||  | ||||||   |||||||||||     
T  55052718 cggattatataatccggaaacatcatctaacacgccctattttttgaagtttccggattacataatccggaaaaaccc-gtaactccatttttcacccta 55052816  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||||||||||| |||| |||||||| ||||||    
T  55052817 taacaaaggaaaacaccattccggattatgaaatcc 55052852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 659 - 708
Target Start/End: Complemental strand, 37370515 - 37370466
Alignment:
Q  659 attcccatggtccatgaatatcattttcaggtgaacaaaatgatattgtt 708  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  37370515 attcccatggcccatgaatatcattttcaggtgaacaaaatgatattgtt 37370466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 50392475 - 50392523
Alignment:
Q  79 ggattacgtaatccggattgcatcagcaccatgaaaaagatggtgttta 127  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||    
T  50392475 ggattacgtaatccggattgcatcagcaccatgaaaaaaagggtgttta 50392523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 8106462 - 8106387
Alignment:
Q  129 ttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaa 204  Q
    |||||||||||||||  | ||||||||||||  ||||| ||||||||||  ||| |||||||||||||||||||||    
T  8106462 ttcggattatgtaatacggaaaaatcatgtagcgcgccctattttttgaagttttcggattacaaaatccggaaaa 8106387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 267
Target Start/End: Original strand, 6003770 - 6003907
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgc-cttattttttgaga-tttccggattacaaaatccggaaaaaatctgtaacttattttttcaccc 228  Q
    |||||||||||||| | ||| ||||||||| || | ||||||||||   | ||||||||||| ||||| || |||||||| ||||||   ||||||||||    
T  6003770 cggattatgtaatccggaaacatcatgtaacgcactcttattttttttaagtttccggattataaaattcg-aaaaaatccgtaactccatttttcaccc 6003868  T
Q  229 tttaacaaaggaaaacatcatttcggattataaaatcca 267  Q
    | |||||||||||| || |||| |||||||| |||||||    
T  6003869 tataacaaaggaaaccaccattccggattatgaaatcca 6003907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 433 - 558
Target Start/End: Original strand, 53272090 - 53272213
Alignment:
Q  433 acttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacattttggttaaaaatgtgaata 532  Q
    ||||||||||||||  | ||||||||||| |  | | ||||||||||||  ||||||||||| || |||||||||||| |||| | |||||||    |||    
T  53272090 acttataaaatgtctattggtattcaaaagtatacatattttaatggat--tcttttatggagtggattttgtgagactttttagctaaaaatacacata 53272187  T
Q  533 atatgctcattcaacaatctcacaaa 558  Q
    | ||||| ||||||||||||||||||    
T  53272188 acatgcttattcaacaatctcacaaa 53272213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 286
Target Start/End: Complemental strand, 34972935 - 34972787
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacc 227  Q
    |||||||||||||| || ||||| ||||||||| ||||| |||||||| |  ||||| |||||||||||||           ||||||   |||||||||    
T  34972935 tttcggattatgtagtccgaaaacatcatgtaacgcgccctatttttttaagtttccagattacaaaatcc-----------gtaactccatttttcacc 34972847  T
Q  228 ctttaacaaaggaaaacatcatttcggattataaaatcc-aaaactttaagggcattttt 286  Q
    || ||||||||||||||| |||| |||||||| ||||||  |||| | ||||||||||||    
T  34972846 ctataacaaaggaaaacaccattccggattatgaaatccggaaacctcaagggcattttt 34972787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 42660211 - 42660249
Alignment:
Q  78 cggattacgtaatccggattgcatcagcaccatgaaaaa 116  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  42660211 cggattacgtaatccggattgcattagcaccatgaaaaa 42660249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 50391677 - 50391715
Alignment:
Q  78 cggattacgtaatccggattgcatcagcaccatgaaaaa 116  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  50391677 cggattacgtattccggattgcatcagcaccatgaaaaa 50391715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 18051118 - 18051166
Alignment:
Q  217 attttttcaccctttaacaaaggaaaacatcatttcggattataaaatc 265  Q
    ||||||||||||||||||||| |||||||||||| | ||||||| ||||    
T  18051118 attttttcaccctttaacaaaagaaaacatcattccagattatataatc 18051166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 422 - 525
Target Start/End: Original strand, 38230942 - 38231043
Alignment:
Q  422 gatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacattttggttaa 521  Q
    |||||||||  |||||| || ||||| | ||||||||||| |  ||||||||| ||||||  ||||  |||||||| |||||||||||| |||| |||||    
T  38230942 gatttctcatgacttatgaattgtccattggtattcaaaagtctatagattttgatggat--tcttggatggaatggattttgtgagactttttagttaa 38231039  T
Q  522 aaat 525  Q
    ||||    
T  38231040 aaat 38231043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 166
Target Start/End: Original strand, 31582521 - 31582556
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgcc 166  Q
    |||||||||||||||||||| |||||||||||||||    
T  31582521 cggattatgtaatcagaaaacatcatgtaatgcgcc 31582556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 265
Target Start/End: Original strand, 46440373 - 46440507
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaactta-ttttttcaccct 229  Q
    |||||||||||||| | ||| ||||||||| ||| | |||||||| |  ||||||||||| ||||| ||| ||||| | || | | | |||||||| |||    
T  46440373 cggattatgtaatccggaaacatcatgtaacgcgtcctatttttttaagtttccggattataaaattcgg-aaaaacccgttattcatttttttcatcct 46440471  T
Q  230 ttaacaaaggaaaacatcatttcggattataaaatc 265  Q
    |||||||| ||| |||||||| || |||||| ||||    
T  46440472 ttaacaaaagaatacatcattccgaattatataatc 46440507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 431 - 556
Target Start/End: Original strand, 44646891 - 44647014
Alignment:
Q  431 caacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacattttggttaaaaatgtgaa 530  Q
    |||||| |||||||||  | |||||||||||||    ||||||||||| ||  |||||||| ||||||||||| | |||| |||| |||||||||    |    
T  44646891 caacttttaaaatgtctattggtattcaaaaatctgcagattttaatgaat--tcttttatagaatgaattttataagactttttagttaaaaatacaca 44646988  T
Q  531 taatatgctcattcaacaatctcaca 556  Q
    | | |||||||||||| |||||||||    
T  44646989 tgacatgctcattcaagaatctcaca 44647014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 241
Target Start/End: Original strand, 49002916 - 49003009
Alignment:
Q  147 aaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaa 241  Q
    ||||||||||||||  || | ||||||||||| ||| |||||||||||||  | | ||||| ||||||| ||||||||||  | |||||||||||    
T  49002916 aaaaaatcatgtaaa-cgtcctattttttgaggttttcggattacaaaatttgaataaaatttgtaactcattttttcacattataacaaaggaa 49003009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 52076996 - 52076950
Alignment:
Q  220 ttttcaccctttaacaaaggaaaacatcatttcggattataaaatcc 266  Q
    |||||||| ||||||||| |||||||||||||| ||||||| |||||    
T  52076996 ttttcaccatttaacaaaagaaaacatcatttccgattatataatcc 52076950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 432 - 556
Target Start/End: Original strand, 16653434 - 16653556
Alignment:
Q  432 aacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacattttggttaaaaatgtgaat 531  Q
    |||||||||||||||  | |||||| |||| || ||| ||||||||  | |||||||| | || |||||||| |||||| ||||  |||||||| |  ||    
T  16653434 aacttataaaatgtctcttggtattaaaaagtttataaattttaat--aaattcttttgtagagtgaattttatgagactttttacttaaaaatatacat 16653531  T
Q  532 aatatgctcattcaacaatctcaca 556  Q
    || || ||||||||||||| |||||    
T  16653532 aacatactcattcaacaatgtcaca 16653556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 541 - 578
Target Start/End: Original strand, 32039629 - 32039666
Alignment:
Q  541 attcaacaatctcacaaaaattggtgagactctcacaa 578  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  32039629 attcaacaatctcacagaaatttgtgagactctcacaa 32039666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 2e-60; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 416 - 646
Target Start/End: Original strand, 24318080 - 24318318
Alignment:
Q  416 aattaggatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacatttt 515  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||  |||||||||||||| |||||||||||| ||||    
T  24318080 aattaggatttctcacaacttataaaatgtctttcggtattcaaaaattgatagattttgatggat--tcttttatggaatggattttgtgagacttttt 24318177  T
Q  516 ggttaaaaatgtgaataatatgctcattcaacaatctcacaaaaa----------ttggtgagactctcacaattttcttttccgtgttgtccaacaaga 605  Q
    ||||||||||||||| || |||||||||||||||||| |||||||          || |||||||||||||| |||||| ||  |||  ||||||| |||    
T  24318178 ggttaaaaatgtgaacaaaatgctcattcaacaatcttacaaaaatttgtgagactttgtgagactctcacacttttctgttatgtgccgtccaacgaga 24318277  T
Q  606 gtcattttctcattagtttccaggtgcaccgaacattattc 646  Q
     |||||||||| |||||||||||||||||  ||||||||||    
T  24318278 ttcattttctcgttagtttccaggtgcacaaaacattattc 24318318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 90 - 332
Target Start/End: Original strand, 36404208 - 36404453
Alignment:
Q  90 tccggattgcatcagcaccatgaaaaagatggtgttta-----tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttcc 184  Q
    ||||||||||||||||||||||||||| | ||||||||     ||||||||||| ||||| |||||| ||||||||  |||| ||||||||||||||| |    
T  36404208 tccggattgcatcagcaccatgaaaaaaagggtgtttaggagttttcggattatataatccgaaaaa-tcatgtaacacgccctattttttgagattttc 36404306  T
Q  185 ggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaacatcatttcggattataaaatccaaaactttaagggcattt 284  Q
    |||||||||||||||||| || || |||||| ||||||||||||||||||||||| ||||  |||| |||||||||||||||  ||||| ||| ||||||    
T  36404307 ggattacaaaatccggaataa-tccgtaactcattttttcaccctttaacaaagggaaactccattccggattataaaatccggaacttcaagagcattt 36404405  T
Q  285 tttgaaaaaatagggcatgcgaggaaagccataagatgggaaaagtaa 332  Q
    ||||||||||||||||  ||||||||| | ||| | ||||||||||||    
T  36404406 tttgaaaaaatagggcgcgcgaggaaaactatagggtgggaaaagtaa 36404453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 78 - 286
Target Start/End: Complemental strand, 41530789 - 41530574
Alignment:
Q  78 cggattacgtaatccggattgcatcagcaccatgaaaaagatggtgtttat------ttcggattatgtaatcagaaaaaa-tcatgtaatgcgccttat 170  Q
    ||||||||||||||||||||||| ||||||||||||||| | ||| ||||       ||| |||||||||||| ||||||| |||||||| ||||| |||    
T  41530789 cggattacgtaatccggattgcaacagcaccatgaaaaaaagggtttttagggggtgttcagattatgtaatctgaaaaaaatcatgtaacgcgccctat 41530690  T
Q  171 tttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaacatcatttcggattataaaatcca-aa 269  Q
    |||||||||||||||||||||||||| |||||||| || |||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||| ||    
T  41530689 tttttgagatttccggattacaaaattcggaaaaa-tccgtaactcatttttccaccctttaacaaaggaaaacatcattccggattataaaatccagaa 41530591  T
Q  270 actttaagggcattttt 286  Q
    |||| ||||||||||||    
T  41530590 acttcaagggcattttt 41530574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 749 - 862
Target Start/End: Complemental strand, 38499751 - 38499638
Alignment:
Q  749 atccaaaccctcaatttacaagatgtagtcggtcagggtggtggtgcgacgagtgacaccagtcctccgcaccacctctaaacgccagatctgttagcgc 848  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||  ||||    
T  38499751 atccaaaccctcaatttgcaagatgtagccggtcagggtggtggtgcgacgagtgacaccaatcctctgcaccacctctaaacgccagatctgtcggcgc 38499652  T
Q  849 cgacgttaaggttg 862  Q
    || |||||||||||    
T  38499651 cggcgttaaggttg 38499638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 749 - 862
Target Start/End: Complemental strand, 10182612 - 10182499
Alignment:
Q  749 atccaaaccctcaatttacaagatgtagtcggtcagggtggtggtgcgacgagtgacaccagtcctccgcaccacctctaaacgccagatctgttagcgc 848  Q
    |||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||| ||||     
T  10182612 atccaacccctcaatttataagatgtagtcggtaagggtggtggtgcgacgagtgacaccagtcttctgcaccacctctaaatgccagatctgtcagcgt 10182513  T
Q  849 cgacgttaaggttg 862  Q
    || |||||||||||    
T  10182512 cggcgttaaggttg 10182499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 131 - 332
Target Start/End: Original strand, 8885552 - 8885754
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||||||| ||||| ||||||||||  ||||||||||||||||||||| ||||| | || ||| |||||||||| |||    
T  8885552 cggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccgg-aaaaacccgttactcattttttcactctt 8885650  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc--aaaactttaagggcattttttgaaaaaatagggcatgcgaggaaagccataagatgggaaaa 328  Q
    ||||||| |||||||||||| ||||||||| |||||  ||   |   |||| | |||| ||||||||||||| ||||||||||  |||| | ||||||||    
T  8885651 taacaaaagaaaacatcattccggattatataatccggaatggtccgagggtaattttagaaaaaatagggcgtgcgaggaaaagcatagggtgggaaaa 8885750  T
Q  329 gtaa 332  Q
    ||||    
T  8885751 gtaa 8885754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 133 - 248
Target Start/End: Original strand, 27928042 - 27928156
Alignment:
Q  133 gattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacccttta 232  Q
    |||||||||||| | ||| ||||||||| ||||| ||||||||||  ||||||||||||||||||||| ||||||| || ||| ||||||||||||||||    
T  27928042 gattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccgg-aaaaatccgttactcattttttcacccttta 27928140  T
Q  233 acaaaggaaaacatca 248  Q
    ||||| ||||||||||    
T  27928141 acaaaagaaaacatca 27928156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 131 - 266
Target Start/End: Complemental strand, 44106283 - 44106149
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||||||| ||||| ||||||||||  |||||||||||||||||| || ||||||| || ||| ||||||||||||||    
T  44106283 cggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatctgg-aaaaatccgttactcattttttcaccctt 44106185  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||| ||||||| ||||   |||||||||||||    
T  44106184 taacaaaagaaaacaccattctagattataaaatcc 44106149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 131 - 264
Target Start/End: Complemental strand, 3094741 - 3094609
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||||||||||||| ||||||||||  |||||||||||||||||||||| |||| | ||||||   |||||||||||     
T  3094741 cggattatgtaatccggaaacatcatgtaatgcgccctattttttgaagtttccggattacaaaatccgga-aaaacccgtaactccatttttcacccta 3094643  T
Q  231 taacaaaggaaaacatcatttcggattataaaat 264  Q
    ||||||||||||||| |||| || ||||| ||||    
T  3094642 taacaaaggaaaacaccattccgaattattaaat 3094609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 128 - 265
Target Start/End: Complemental strand, 21004452 - 21004317
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacc 227  Q
    ||||||||||||||||| | ||| || |||||| |||||||||||||| |  |||||||||||||||||||||| |||||| ||||||   |||||||||    
T  21004452 tttcggattatgtaatccggaaacat-atgtaacgcgccttattttttaaagtttccggattacaaaatccgga-aaaatccgtaactccatttttcacc 21004355  T
Q  228 ctttaacaaaggaaaacatcatttcggattataaaatc 265  Q
    || ||||||||||||||| |||| |||||||| |||||    
T  21004354 ctataacaaaggaaaacaccattccggattatgaaatc 21004317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 78 - 244
Target Start/End: Original strand, 7971037 - 7971208
Alignment:
Q  78 cggattacgtaatccggattgcatcagcaccatgaaaaagatggtgtttat------ttcggattatgtaat-cagaaaaaatcatgtaatgcgccttat 170  Q
    |||||||||||||||||||||||||||||||||| |||| | |||||||||      || |||||||||||| ||||||| |||| |||  ||| | ||     
T  7971037 cggattacgtaatccggattgcatcagcaccatggaaaaaagggtgtttatggggtgtttggattatgtaatccagaaaacatcacgtagcgcgtccta- 7971135  T
Q  171 tttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaac 244  Q
    |||||||  ||||| ||||||||||||||| ||||||| ||||||   ||||||||||| |||| |||||||||    
T  7971136 tttttgaagtttccagattacaaaatccgg-aaaaatccgtaactccgtttttcaccctataacgaaggaaaac 7971208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 132 - 266
Target Start/End: Complemental strand, 9073563 - 9073430
Alignment:
Q  132 ggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacccttt 231  Q
    ||||||||||||| | ||| ||||||||| |   ||||||||||||  |||||||||||  ||||||| ||||| || || ||| ||||||| |||||||    
T  9073563 ggattatgtaatccggaaacatcatgtaacgaatcttattttttgaagtttccggattaacaaatccg-aaaaagtccgttactcattttttaacccttt 9073465  T
Q  232 aacaaaggaaaacatcatttcggattataaaatcc 266  Q
    |||||| ||||||||||||||| |||||| |||||    
T  9073464 aacaaaagaaaacatcatttcgaattatataatcc 9073430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 131 - 257
Target Start/End: Original strand, 31519991 - 31520116
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||||||| ||||  ||||||||||  |||| |||||||||||||||| ||||| | ||||||   |||||||||||     
T  31519991 cggattatgtaatccggaaacatcatgtaacgcgctctattttttgaagtttctggattacaaaatccgg-aaaaagccgtaactccatttttcacccta 31520089  T
Q  231 taacaaaggaaaacatcatttcggatt 257  Q
    ||||||||||||||| |||| ||||||    
T  31520090 taacaaaggaaaacaccattccggatt 31520116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 132 - 265
Target Start/End: Complemental strand, 16310658 - 16310526
Alignment:
Q  132 ggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacccttt 231  Q
    ||||| ||||||| | ||||||||| ||| || || ||||||||||  |||||||||||||||||||||| |||| ||||||||   ||||||||||  |    
T  16310658 ggattgtgtaatccggaaaaatcatctaacgcaccctattttttgaagtttccggattacaaaatccgga-aaaacctgtaactccatttttcaccccat 16310560  T
Q  232 aacaaaggaaaacatcatttcggattataaaatc 265  Q
    |||||||||||||| ||||  ||||||| |||||    
T  16310559 aacaaaggaaaacaccattctggattatgaaatc 16310526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 135 - 256
Target Start/End: Complemental strand, 28916839 - 28916719
Alignment:
Q  135 ttatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaac 234  Q
    ||||||||||   ||| ||||| ||| ||||| ||||||||||  ||||||||||||||||||||||||||  | || ||  ||||||||||||||||||    
T  28916839 ttatgtaatccagaaacatcatttaacgcgccctattttttgaagtttccggattacaaaatccggaaaaaccc-gttacccattttttcaccctttaac 28916741  T
Q  235 aaaggaaaacatcatttcggat 256  Q
    ||| |||||||||||| |||||    
T  28916740 aaaagaaaacatcattccggat 28916719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 131 - 260
Target Start/End: Original strand, 42280990 - 42281121
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatg---taatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacc 227  Q
    |||||||||||||| | ||| ||||||   ||| ||||  ||||||||||  ||| |||||||| ||||||||||||| || || ||| |||||||||||    
T  42280990 cggattatgtaatctggaaacatcatgatgtaacgcgctctattttttgaagttttcggattacgaaatccggaaaaa-tccgttactcattttttcacc 42281088  T
Q  228 ctttaacaaaggaaaacatcatttcggattata 260  Q
    ||||||||||  ||||||||||| |||||||||    
T  42281089 ctttaacaaaaaaaaacatcattccggattata 42281121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 37248617 - 37248415
Alignment:
Q  132 ggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacccttt 231  Q
    ||||||||||||| | ||| ||||| ||| ||||| |||||||| |  ||| ||||||||||||||| | ||||| | ||||||   ||||||||||| |    
T  37248617 ggattatgtaatccggaaacatcatctaacgcgccctatttttttaagttttcggattacaaaatccag-aaaaacccgtaactccatttttcaccctat 37248519  T
Q  232 aacaaaggaaaacatcatttcggattataaaatccaaaactttaagggcattttt---tgaaaaaatagggcatgcgaggaaagccataagatgggaaaa 328  Q
    |||||||||||||| ||||  ||||| | ||||||  ||  | ||||||||||||     ||||||||||||  ||||||||| || || | ||||||||    
T  37248518 aacaaaggaaaacaccattctggattttgaaatccggaaactcaagggcatttttgaagaaaaaaatagggcgcgcgaggaaacccctagggtgggaaaa 37248419  T
Q  329 gtaa 332  Q
    ||||    
T  37248418 gtaa 37248415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 205
Target Start/End: Original strand, 35676635 - 35676711
Alignment:
Q  129 ttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaa 205  Q
    |||||||||||||||| | ||||||||| ||  ||||| |||||||||   ||||||||||||||||||||||||||    
T  35676635 ttcggattatgtaatccggaaaaatcatatagcgcgccctattttttgtagtttccggattacaaaatccggaaaaa 35676711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 24627712 - 24627650
Alignment:
Q  47 ttcagaataggtgctggtgttgtccggattacggattacgtaatccggattgcatcagcaccatgaaaaa 116  Q
    |||||||| ||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  24627712 ttcagaattggtgctggtgttgtccggattacg-------taatccggattgcatcagcaccatgaaaaa 24627650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 219 - 266
Target Start/End: Complemental strand, 40994792 - 40994745
Alignment:
Q  219 tttttcaccctttaacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||||||||||||||| |||||||||||| ||||||||| |||||    
T  40994792 tttttcaccctttaacaaaagaaaacatcattccggattatataatcc 40994745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 11698385 - 11698451
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatc 197  Q
    |||||||||||||| | ||| |||||||||  || ||||||||||||  ||||||||||||||||||    
T  11698385 cggattatgtaatccggaaacatcatgtaacacgtcttattttttgaagtttccggattacaaaatc 11698451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 433 - 558
Target Start/End: Original strand, 14061727 - 14061850
Alignment:
Q  433 acttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacattttggttaaaaatgtgaata 532  Q
    ||||||||||||||  | ||||||||||| |  | | ||||||||||||  |||||||| || || |||||||||||| |||| | |||||||    |||    
T  14061727 acttataaaatgtctgttggtattcaaaagtatacaaattttaatggat--tcttttatagagtggattttgtgagactttttagctaaaaatacacata 14061824  T
Q  533 atatgctcattcaacaatctcacaaa 558  Q
    | ||||| ||||||||||||||||||    
T  14061825 acatgcttattcaacaatctcacaaa 14061850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 260
Target Start/End: Complemental strand, 34853382 - 34853262
Alignment:
Q  138 tgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaa 237  Q
    ||||||| | ||| ||||||||| ||||| |||||||| |  ||| ||||||||||||||||||||||  | ||| || ||||| | |||||||||||||    
T  34853382 tgtaatccggaaacatcatgtaacgcgccctattttttaaagttttcggattacaaaatccggaaaaaccc-gta-ctcattttcttaccctttaacaaa 34853285  T
Q  238 ggaaaacatcatttcggattata 260  Q
      ||||||||||| || ||||||    
T  34853284 ataaaacatcattccgaattata 34853262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 41530999 - 41530963
Alignment:
Q  80 gattacgtaatccggattgcatcagcaccatgaaaaa 116  Q
    |||||||||||||||||||||| ||||||||||||||    
T  41530999 gattacgtaatccggattgcattagcaccatgaaaaa 41530963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 182
Target Start/End: Original strand, 31234774 - 31234883
Alignment:
Q  78 cggattacgtaatccggattgcatcagcaccatgaaaaagatggtgttta------tttcggattatgtaatcagaaaaaatcatgtaatgcgccttatt 171  Q
    |||||||||||||||| | |||||||| ||||||||||| ||||||||||       |||||||| | ||||| |||||||| || ||  ||||| ||||    
T  31234774 cggattacgtaatccgaactgcatcagtaccatgaaaaa-atggtgtttaggggttgttcggattctataatccgaaaaaattatatagcgcgccctatt 31234872  T
Q  172 ttttgagattt 182  Q
    |||||||||||    
T  31234873 ttttgagattt 31234883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 451 - 524
Target Start/End: Complemental strand, 39039008 - 39038937
Alignment:
Q  451 ggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacattttggttaaaaa 524  Q
    |||||||||||||  ||| ||||||||||||  |||||| |  ||||||||||||||||| |||| ||||||||    
T  39039008 ggtattcaaaaatctataaattttaatggat--tcttttgtataatgaattttgtgagactttttagttaaaaa 39038937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 4e-59; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 78 - 298
Target Start/End: Original strand, 43319236 - 43319462
Alignment:
Q  78 cggattacgtaatccggattgcatcagcaccatgaaaaagatggtgttta------tttcggattatgtaatcagaaaaaatcatgtaatgcgccttatt 171  Q
    ||||||||||||||||||||||||||||||||||||||| |  |||||||      ||||||||||||||||| ||||||||||||||| ||||| ||||    
T  43319236 cggattacgtaatccggattgcatcagcaccatgaaaaaaagagtgtttagggggttttcggattatgtaatccgaaaaaatcatgtaacgcgccatatt 43319335  T
Q  172 ttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaacatcatttcggattataaaatcca-aaa 270  Q
    |||| |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||   || | |||||||||||||| |||    
T  43319336 tttttagatttccggattacaaaatccgg-aaaaatccgtaactcattttttcaccctttaacaaaggaaaacactgttccagattataaaatccagaaa 43319434  T
Q  271 ctttaagggcattttttgaaaaaatagg 298  Q
    ||| ||| |||||| | |||||||||||    
T  43319435 cttcaagagcatttctagaaaaaatagg 43319462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 752 - 842
Target Start/End: Original strand, 27786291 - 27786381
Alignment:
Q  752 caaaccctcaatttacaagatgtagtcggtcagggtggtggtgcgacgagtgacaccagtcctccgcaccacctctaaacgccagatctgt 842  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27786291 caaaccctcaatttacaagatgtagtcggtcagggtggtggtgcgacgagtgacaccagtcctccgcaccacctctaaacgccagatctgt 27786381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 416 - 634
Target Start/End: Original strand, 42657879 - 42658106
Alignment:
Q  416 aattaggatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacatttt 515  Q
    ||||||||||| |||||||||||||||||||| | |||||||||||||  | ||||||| ||||||  |||| ||||||||| ||||| |||||| ||||    
T  42657879 aattaggatttttcacaacttataaaatgtccattggtattcaaaaatcta-agattttgatggat--tcttctatggaatggattttatgagacttttt 42657975  T
Q  516 ggttaaaaatgtgaataatatgctcattcaacaatctcacaaaaa-----------ttggtgagactctcacaattttcttttccgtgttgtccaacaag 604  Q
     |||||||||||||| |  || |||||||||||||||||||||||           |||||||||||||||||||||||||||||||| ||||||||||     
T  42657976 agttaaaaatgtgaacacaatactcattcaacaatctcacaaaaatttgtgagactttggtgagactctcacaattttcttttccgtgctgtccaacaaa 42658075  T
Q  605 agt-cattttctcattagtttccaggtgcac 634  Q
    | | ||||||||||||||||| || ||||||    
T  42658076 attccattttctcattagttttcatgtgcac 42658106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 749 - 862
Target Start/End: Complemental strand, 47897221 - 47897108
Alignment:
Q  749 atccaaaccctcaatttacaagatgtagtcggtcagggtggtggtgcgacgagtgacaccagtcctccgcaccacctctaaacgccagatctgttagcgc 848  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||  | ||    
T  47897221 atccaaaccctcaatttgcaagatgtagccggtcagggtggtggtgcgacgagtgacagcggtcctccgcaccacctctaaacgccagatctgtcggtgc 47897122  T
Q  849 cgacgttaaggttg 862  Q
    |  |||||||||||    
T  47897121 cagcgttaaggttg 47897108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 128 - 266
Target Start/End: Original strand, 32817707 - 32817844
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacc 227  Q
    ||||||||||||||||| | ||| ||||||||||||||| ||||||||||  |||||||||||||||||| || ||||| | || ||| |||||||||||    
T  32817707 tttcggattatgtaatctggaaacatcatgtaatgcgccctattttttgaagtttccggattacaaaatctgg-aaaaacccgttactcattttttcacc 32817805  T
Q  228 ctttaacaaaggaaaacatcatttcggattataaaatcc 266  Q
    |||||||||| |||||||||||| ||||||||| |||||    
T  32817806 ctttaacaaaagaaaacatcattccggattatataatcc 32817844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 131 - 286
Target Start/End: Original strand, 18583643 - 18583798
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| ||||| ||||||||| ||||| |||||||| |  ||||| ||||||||||||||| |||| || |||||||  |||||||||||     
T  18583643 cggattatgtaatccgaaaacatcatgtaacgcgccctatttttttaagtttccagattacaaaatccgg-aaaagtccgtaacttcatttttcacccta 18583741  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc-aaaactttaagggcattttt 286  Q
    ||||||||||||||| |||| |||||||| |||||| ||||| | ||||||||||||    
T  18583742 taacaaaggaaaacaccattccggattatgaaatccgaaaacctcaagggcattttt 18583798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 146 - 296
Target Start/End: Complemental strand, 27794899 - 27794750
Alignment:
Q  146 gaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaaca 245  Q
    ||||||||||||||| ||||| ||||||| ||||||| |||||||||||||| | ||||||||  ||||| ||||||||||||| |||||||||||||||    
T  27794899 gaaaaaatcatgtaaagcgccctattttt-gagattttcggattacaaaatctg-aaaaaatccataactcattttttcaccctataacaaaggaaaaca 27794802  T
Q  246 tcatttcggattataaaatcc-aaaactttaagggcattttttgaaaaaata 296  Q
     || |||||||||| |||||| |||| || ||||||||||||  ||||||||    
T  27794801 ccagttcggattatgaaatccgaaaatttcaagggcatttttgaaaaaaata 27794750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 44573195 - 44573299
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| ||||| ||||||||| ||||| ||||||||||  ||||||||||||||||||| |||||||||||| ||| ||||||||||||||    
T  44573195 cggattatgtaatccgaaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatcc-gaaaaaatctgttactcattttttcaccctt 44573293  T
Q  231 taacaa 236  Q
    ||||||    
T  44573294 taacaa 44573299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 772 - 861
Target Start/End: Complemental strand, 8039738 - 8039649
Alignment:
Q  772 tgtagtcggtcagggtggtggtgcgacgagtgacaccagtcctccgcaccacctctaaacgccagatctgttagcgccgacgttaaggtt 861  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||| |||  |||||||||||||||||    
T  8039738 tgtagccggtcagggtggtggtgtgacaagtgacaccagtcctccgcaccacctctaaacgctagatatgtcggcgccgacgttaaggtt 8039649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 128 - 265
Target Start/End: Original strand, 40908030 - 40908166
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacc 227  Q
    ||||||||||||||||| ||||| ||||||||   ||||  |||||||||  |||||||||| |||||| |  |||||||| || ||| |||||||||||    
T  40908030 tttcggattatgtaatccgaaaacatcatgtagcacgcccaattttttgaagtttccggattgcaaaattct-aaaaaatccgttactcattttttcacc 40908128  T
Q  228 ctttaacaaaggaaaacatcatttcggattataaaatc 265  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  40908129 ctttaacaaaagaaaacaccatttcggattataaaatc 40908166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 131 - 266
Target Start/End: Original strand, 34162820 - 34162955
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||| |||  |||| ||||||||||  ||||||||||||||||||||||||||| | | ||||   |||||||||||     
T  34162820 cggattatgtaatccggaaacatcatctaacacgccctattttttgaagtttccggattacaaaatccggaaaaaacccgcaactccatttttcacccta 34162919  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||||||||||| |||| |||||||| ||||||    
T  34162920 taacaaaggaaaacaccattccggattatgaaatcc 34162955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 422 - 599
Target Start/End: Original strand, 27198441 - 27198626
Alignment:
Q  422 gatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacattttggttaa 521  Q
    |||||||||  |||| |||||||||| | |||||||||||||  ||||||||||||||||  |||||||| || |  |||||||||||| | || |||||    
T  27198441 gatttctcattacttctaaaatgtccattggtattcaaaaatatatagattttaatggat--tcttttatagagttgattttgtgagacttcttagttaa 27198538  T
Q  522 aaatgtgaataatatgctcattcaacaatctcacaaaaa----------ttggtgagactctcacaattttcttttccgtgttgtcca 599  Q
    |||| |||| || || |||||||||||||||||||||||          || ||||||||||||||||| |||||| |||||||||||    
T  27198539 aaatatgaacaaaatactcattcaacaatctcacaaaaacttactagactttgtgagactctcacaattatctttttcgtgttgtcca 27198626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 129 - 266
Target Start/End: Original strand, 6223834 - 6223971
Alignment:
Q  129 ttcggattatgtaatcagaaaaaatcatgtaatgcgccttatttttt-gagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacc 227  Q
    ||||||||||||||||  |||||||||||||||||||  |||||||| ||  ||| ||||||  ||||| || |||||||| |||||| |||||||||||    
T  6223834 ttcggattatgtaatccaaaaaaatcatgtaatgcgctctatttttttgaagttttcggattgaaaaattcg-aaaaaatccgtaactcattttttcacc 6223932  T
Q  228 ctttaacaaaggaaaacatcatttcggattataaaatcc 266  Q
    || |||||||||||||||  | |||||||||| ||||||    
T  6223933 ctataacaaaggaaaacacgagttcggattatgaaatcc 6223971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 133 - 286
Target Start/End: Original strand, 33611511 - 33611664
Alignment:
Q  133 gattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacccttta 232  Q
    |||||||||||| | ||| ||||||||| ||||| ||||||||||  |||||  |||||||||||| ||||||||| ||||||   ||||||||||| ||    
T  33611511 gattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccaaattacaaaatcc-gaaaaaatccgtaactccatttttcaccctata 33611609  T
Q  233 acaaaggaaaacatcatttcggattataaaatcca-aaactttaagggcattttt 286  Q
    |||||| |||||| ||||  ||||||| ||||||| |||| | ||||||||||||    
T  33611610 acaaagaaaaacaccattctggattatgaaatccagaaacctcaagggcattttt 33611664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 131 - 260
Target Start/End: Original strand, 15069941 - 15070069
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||| ||||| | ||| |||||||||  || | ||||||||||  |||||||||||||||||||| |||| ||| || ||| |||| ||| |||||    
T  15069941 cggattatataatccggaaacatcatgtaacacgtcctattttttgaagtttccggattacaaaatccg-aaaatatccgttactcatttgttctccctt 15070039  T
Q  231 taacaaaggaaaacatcatttcggattata 260  Q
    ||||||| ||||||||||||||||||||||    
T  15070040 taacaaaagaaaacatcatttcggattata 15070069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 131 - 266
Target Start/End: Original strand, 41584769 - 41584903
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| ||||| |||||||||   ||| || ||||||| |||||||||||||||||||| | ||||| | |||||||  |||||||||||     
T  41584769 cggattatgtaatccgaaaacatcatgtaacatgccctagtttttgaaatttccggattacaaaatccag-aaaaacccgtaacttcatttttcacccta 41584867  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||| ||||||| |||| | |||||| ||||||    
T  41584868 taacaaaagaaaacaccattcctgattatgaaatcc 41584903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 134 - 286
Target Start/End: Complemental strand, 23442795 - 23442643
Alignment:
Q  134 attatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaa 233  Q
    ||||| ||||| | ||| ||||||||| ||||| ||||||||||  ||||| ||||| |||||||||| |||||| ||||||   ||||||||| | |||    
T  23442795 attatataatccggaaacatcatgtaacgcgccctattttttgaagtttccagattataaaatccgga-aaaatccgtaactccatttttcaccttataa 23442697  T
Q  234 caaaggaaaacatcatttcggattataaaatcc-aaaactttaagggcattttt 286  Q
    ||||||||||||||||| ||||| || ||||||  |||| | ||||||||||||    
T  23442696 caaaggaaaacatcattccggataatgaaatccggaaacctcaagggcattttt 23442643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 128 - 286
Target Start/End: Original strand, 30829562 - 30829709
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacc 227  Q
    ||||||||||||||||| ||||| ||||||||| ||||| |||||||  || ||||||||||||||||||||           ||||||  |||||||||    
T  30829562 tttcggattatgtaatccgaaaacatcatgtaacgcgccctatttttgaag-tttccggattacaaaatccg-----------taacttcatttttcacc 30829649  T
Q  228 ctttaacaaaggaaaacatcatttcggattataaaatcc-aaaactttaagggcattttt 286  Q
    || ||||||||||||||| |||| |||||||| ||||||  |||||| ||||||||||||    
T  30829650 ctataacaaaggaaaacaccattccggattatgaaatccggaaacttcaagggcattttt 30829709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 131 - 294
Target Start/End: Complemental strand, 17000438 - 17000277
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    ||||||||||||||   ||| ||||| ||| | ||| |||| |||||  |||||| |||||||||||||||||||  | ||||||   |||||||||||     
T  17000438 cggattatgtaatccagaaacatcatctaacgtgccctattatttgatgtttccgaattacaaaatccggaaaaa--ccgtaactccatttttcacccta 17000341  T
Q  231 taacaaaggaaaacatcatttcggattataaaatccaaaactttaagggcattttttgaaaaaa 294  Q
    ||||||||||||||| ||||  ||||||| |||||| |||  | |||||||||||| |||||||    
T  17000340 taacaaaggaaaacaccattctggattatgaaatccgaaaactcaagggcatttttggaaaaaa 17000277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 79 - 266
Target Start/End: Complemental strand, 38950387 - 38950207
Alignment:
Q  79 ggattacgtaatccggattgcatcagcaccatgaaaaagatggtgttta------tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattt 172  Q
    ||||||||||||||| ||||||||| |||||||||||| |  |||||||      ||||||||||||||||| ||||||||||||||| ||||| |||||    
T  38950387 ggattacgtaatccgaattgcatcaacaccatgaaaaaaagagtgtttagggagttttcggattatgtaatctgaaaaaatcatgtaacgcgccctattt 38950288  T
Q  173 tttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||          ||||||||||||| || ||||||| |||||| | ||||||| | ||||||||||||||| | |||| || ||||||||||||    
T  38950287 tt----------ggattacaaaatctgg-aaaaatccgtaactca-tttttca-cttttaacaaaggaaaataccattccgaattataaaatcc 38950207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 128 - 266
Target Start/End: Original strand, 45567972 - 45568110
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttatttt-ttcac 226  Q
    |||||||| ||||||||  |||| ||||||||  ||||| ||||||||||  |||||| |||||||||| ||||||||  | || ||| ||||| |||||    
T  45567972 tttcggatcatgtaatccaaaaatatcatgtagcgcgccctattttttgaagtttccgaattacaaaattcggaaaaaccc-gttactcatttttttcac 45568070  T
Q  227 cctttaacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||||||| ||||| |||||| ||||||||| |||||    
T  45568071 cctttaacaaaagaaaatatcattccggattatataatcc 45568110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 131 - 260
Target Start/End: Original strand, 40650774 - 40650903
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaactta-ttttttcaccct 229  Q
    ||||||||||||||   ||| |||||||||  |||| ||||||||||  ||||||||||||||| ||| ||||||||| || ||| | ||||||||| ||    
T  40650774 cggattatgtaatccagaaacatcatgtaacacgccctattttttgaagtttccggattacaaattcc-gaaaaaatccgttactcatttttttcacgct 40650872  T
Q  230 ttaacaaaggaaaacatcatttcggattata 260  Q
    |||||||| ||||||| |||| |||||||||    
T  40650873 ttaacaaaagaaaacaccattccggattata 40650903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 128 - 265
Target Start/End: Complemental strand, 42546030 - 42545895
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacc 227  Q
    |||||||| |||| ||| | ||| ||||||||| ||| | ||||||||||  |||||||||||||||||||||| |||||| || | ||  |||||||||    
T  42546030 tttcggatcatgttatccggaaacatcatgtaacgcgtcctattttttgaagtttccggattacaaaatccgga-aaaatccgtta-ttcatttttcacc 42545933  T
Q  228 ctttaacaaaggaaaacatcatttcggattataaaatc 265  Q
    |||||||||| || |||| |||| ||||||||| ||||    
T  42545932 ctttaacaaaagataacaccattccggattatataatc 42545895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 202 - 266
Target Start/End: Complemental strand, 38885229 - 38885165
Alignment:
Q  202 aaaaatctgtaacttattttttcaccctttaacaaaggaaaacatcatttcggattataaaatcc 266  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||| |||| ||||||||| |||||    
T  38885229 aaaaatctgttactcattttttcaccctttaacaaaagaaaacaccattccggattatataatcc 38885165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 199
Target Start/End: Original strand, 800899 - 800969
Alignment:
Q  129 ttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccg 199  Q
    |||||||| | ||||| ||||||||||  ||| ||||| ||||||||||||||| ||||||||||||||||    
T  800899 ttcggattctataatccgaaaaaatcaaataaagcgccctattttttgagattttcggattacaaaatccg 800969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 7011249 - 7011156
Alignment:
Q  152 atcatgtaatgcgcc-ttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaaca 245  Q
    ||||||||| ||||| || ||||||||  ||||||||||||||||||| ||||||||| || ||| | ||||||||||||||||||  |||||||    
T  7011249 atcatgtaacgcgccctttttttttgaagtttccggattacaaaatccagaaaaaatccgttactca-tttttcaccctttaacaatagaaaaca 7011156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 205
Target Start/End: Original strand, 28866732 - 28866803
Alignment:
Q  133 gattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaa 205  Q
    |||||||||||| | ||||||||||||  ||||| |||||||| | | |||||||||||||||||||||||||    
T  28866732 gattatgtaatccggaaaaatcatgtagcgcgccctatttttt-atagttccggattacaaaatccggaaaaa 28866803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 770 - 838
Target Start/End: Original strand, 32946124 - 32946192
Alignment:
Q  770 gatgtagtcggtcagggtggtggtgcgacgagtgacaccagtcctccgcaccacctctaaacgccagat 838  Q
    |||||||| | ||| |||||| |||||||||| |||||  |||||||||||||||||||||||| ||||    
T  32946124 gatgtagttgttcaaggtggttgtgcgacgagagacacatgtcctccgcaccacctctaaacgcaagat 32946192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 43319027 - 43319063
Alignment:
Q  80 gattacgtaatccggattgcatcagcaccatgaaaaa 116  Q
    |||||||||||||||||||||||||||||||||||||    
T  43319027 gattacgtaatccggattgcatcagcaccatgaaaaa 43319063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 266
Target Start/End: Complemental strand, 49677542 - 49677419
Alignment:
Q  132 ggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacccttt 231  Q
    ||||||||||||| | ||| ||||||||| ||||| ||||||||||  ||||| ||||||||||| ||           | ||| |||||||||||||||    
T  49677542 ggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccagattacaaaattcg-----------ttactcattttttcacccttt 49677454  T
Q  232 aacaaaggaaaacatcatttcggattataaaatcc 266  Q
    |||||| ||||||| |||| ||||||||| |||||    
T  49677453 aacaaaagaaaacaccattccggattatataatcc 49677419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 52744931 - 52745034
Alignment:
Q  146 gaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaaca 245  Q
    ||||| ||||||||  ||||| ||||||||||  ||| | ||||||||||| ||| ||||||| || ||| |||||||||| |||||||||| ||||| |    
T  52744931 gaaaatatcatgtagcgcgccctattttttgaagttttcagattacaaaattcgg-aaaaatccgttactcattttttcacactttaacaaaagaaaata 52745029  T
Q  246 tcatt 250  Q
    |||||    
T  52745030 tcatt 52745034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 466 - 556
Target Start/End: Complemental strand, 19007450 - 19007362
Alignment:
Q  466 atagattttaatggatattcttttatggaatgaattttgtgagacattttggttaaaaatgtgaataatatgctcattcaacaatctcaca 556  Q
    ||||||||| ||||||  ||||  |||||||| |||||||||||| |||| ||||||||| | |||||||  ||||| |||||||||||||    
T  19007450 atagattttgatggat--tcttggatggaatggattttgtgagactttttagttaaaaatataaataatactctcatccaacaatctcaca 19007362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 266
Target Start/End: Complemental strand, 49786329 - 49786195
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||||||| ||| | |||||||| |  ||| |||||| ||||||||||| ||||||  |||||   |||||||||||     
T  49786329 cggattatgtaatccggaaacatcatgtaacgcgtcctattttttaaagttttcggattgcaaaatccgga-aaaatccataactccatttttcacccta 49786231  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||| |||||||||||  ||| | |||||| ||||||    
T  49786230 taataaaggaaaacacaattccagattatgaaatcc 49786195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 34006316 - 34006246
Alignment:
Q  134 attatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaa 204  Q
    ||||||||||| | ||||||||||||   |||| ||||||||||  ||||||||||| |||||||||||||    
T  34006316 attatgtaatccggaaaaatcatgtagcccgccctattttttgaattttccggattaaaaaatccggaaaa 34006246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 38950869 - 38950832
Alignment:
Q  79 ggattacgtaatccggattgcatcagcaccatgaaaaa 116  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  38950869 ggattacgtaatccgaattgcatcagcaccatgaaaaa 38950832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 451 - 558
Target Start/End: Original strand, 4289132 - 4289237
Alignment:
Q  451 ggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacattttggttaaaaatgtgaataatatgctcattcaacaat 550  Q
    ||||||||||| |  | ||||||||||||||  ||||||||||| || |||||||||||  |||| | |||||||    |||| ||||| ||||||||||    
T  4289132 ggtattcaaaagtatacagattttaatggat--tcttttatggagtggattttgtgagaatttttagctaaaaatacacataagatgcttattcaacaat 4289229  T
Q  551 ctcacaaa 558  Q
    ||||||||    
T  4289230 ctcacaaa 4289237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 422 - 525
Target Start/End: Original strand, 48194760 - 48194861
Alignment:
Q  422 gatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacattttggttaa 521  Q
    |||||||||  |||||| || ||||| | ||||||||||| |  ||||||||| ||||||  ||||  |||||||| |||||||||||| |||| |||||    
T  48194760 gatttctcatgacttatgaattgtccattggtattcaaaagtctatagattttgatggat--tcttggatggaatggattttgtgagactttttagttaa 48194857  T
Q  522 aaat 525  Q
    ||||    
T  48194858 aaat 48194861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 422 - 525
Target Start/End: Original strand, 48203518 - 48203619
Alignment:
Q  422 gatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacattttggttaa 521  Q
    |||||||||  |||||| || ||||| | ||||||||||| |  ||||||||| ||||||  ||||  |||||||| |||||||||||| |||| |||||    
T  48203518 gatttctcatgacttatgaattgtccataggtattcaaaagtctatagattttgatggat--tcttggatggaatggattttgtgagactttttagttaa 48203615  T
Q  522 aaat 525  Q
    ||||    
T  48203616 aaat 48203619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 24471411 - 24471481
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccg 199  Q
    ||||||||||||||||| | ||| ||||||||| ||||| || |||||||  |||| |||||||||||||||    
T  24471411 tttcggattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttctggattacaaaatccg 24471481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 32542455 - 32542388
Alignment:
Q  132 ggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccg 199  Q
    ||||||||||||| | ||| ||||||||| || || ||||||||||   |||||||||||||||||||    
T  32542455 ggattatgtaatccgtaaacatcatgtaacgcaccctattttttgaagattccggattacaaaatccg 32542388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 45046950 - 45047023
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaa 205  Q
    |||||||||||||  | ||| ||||||||||| ||| | ||||||||  ||| ||||||||||||||||||||||    
T  45046950 cggattatgtaattcggaaacatcatgtaatg-gccctcttttttgaagttttcggattacaaaatccggaaaaa 45047023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 432 - 560
Target Start/End: Complemental strand, 51826741 - 51826614
Alignment:
Q  432 aacttataaaatgtccttcggtattcaaaaattgat-agattttaatggatattcttttatggaatgaattttgtgagacattttggttaaaaatgtgaa 530  Q
    |||||||||||||||  | |||||| ||||| |  | ||||||||||||||  ||| || | || || |||||||||||| |||| |||||||||    |    
T  51826741 aacttataaaatgtctattggtattaaaaaaatcttgagattttaatggat--tctattgtagagtggattttgtgagactttttagttaaaaatacaca 51826644  T
Q  531 taatatgctcattcaacaatctcacaaaaa 560  Q
    | | ||||||||||||||||||||||||||    
T  51826643 tgaaatgctcattcaacaatctcacaaaaa 51826614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 9446184 - 9446221
Alignment:
Q  162 gcgccttattttttgagatttccggattacaaaatccg 199  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  9446184 gcgccctattttttgagattttcggattacaaaatccg 9446221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 5e-37; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 752 - 859
Target Start/End: Complemental strand, 32979790 - 32979683
Alignment:
Q  752 caaaccctcaatttacaagatgtagtcggtcagggtggtggtgcgacgagtgacaccagtcctccgcaccacctctaaacgccagatctgttagcgccga 851  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||  ||||| |    
T  32979790 caaaccctcgatttacaagatgtagccggtcagggtggtggtgcgacgagtgacaccagtcctctgcaccacctctaaacgccatatctgtcggcgccaa 32979691  T
Q  852 cgttaagg 859  Q
    ||||||||    
T  32979690 cgttaagg 32979683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 131 - 265
Target Start/End: Original strand, 19225697 - 19225831
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||||||| || || ||||||||||  |||  |||||||||||||||||||||||| || ||| ||||||||||||||    
T  19225697 cggattatgtaatccggaaacatcatgtaacgcaccctattttttgaagtttttggattacaaaatccggaaaaaatccgttactcattttttcaccctt 19225796  T
Q  231 taacaaaggaaaacatcatttcggattataaaatc 265  Q
    ||||||| ||||||||||||||| |||||| ||||    
T  19225797 taacaaaagaaaacatcatttcgaattatataatc 19225831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 3936167 - 3935966
Alignment:
Q  132 ggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacccttt 231  Q
    ||||||||||||| | ||| ||||||||| ||||| ||||||||||  |||||||||||||||||||||| |||| | || ||| |||||||||| ||||    
T  3936167 ggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccgga-aaaacccgttactcattttttcactcttt 3936069  T
Q  232 aacaaaggaaaacatcatttcggattataaaatcc--aaaactttaagggcattttttgaaaaaatagggcatgcgaggaaagccataagatgggaaaag 329  Q
    |||||| |||||||||||| ||||||||| |||||  ||  ||   |||| | |||| |||||||||||||| | |||||||| |||||| | | |||||    
T  3936068 aacaaaagaaaacatcattccggattatataatccggaatgctccgagggtaattttggaaaaaatagggcacgtgaggaaagacataaggtagaaaaag 3935969  T
Q  330 taa 332  Q
    |||    
T  3935968 taa 3935966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 131 - 266
Target Start/End: Original strand, 42925740 - 42925874
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||||||  |||||||||||||||||| || ||||| | ||||||   |||||||||||     
T  42925740 cggattatgtaatccgaaaacatcatgtaatgcgccctattttttgaagtttccggattacaaaatcagg-aaaaacccgtaactccatttttcacccta 42925838  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||||||||||| |||| |||||||| ||||||    
T  42925839 taacaaaggaaaacaccattccggattatgaaatcc 42925874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 131 - 250
Target Start/End: Complemental strand, 43737184 - 43737066
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| ||||| ||||||||| ||||| ||||||||||  |||||||||||||||||||||| |||||| || ||| ||||||||||||||    
T  43737184 cggattatgtaatccgaaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccgga-aaaatccgttactcattttttcaccctt 43737086  T
Q  231 taacaaaggaaaacatcatt 250  Q
    ||||||| ||||||| ||||    
T  43737085 taacaaaagaaaacaccatt 43737066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 416 - 561
Target Start/End: Original strand, 3634368 - 3634511
Alignment:
Q  416 aattaggatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacatttt 515  Q
    ||||| ||||||||||||||||||||||||  || |||||||||||||| || |||||| ||||  |||||||||||||||| |||||| ||||| ||||    
T  3634368 aattaagatttctcacaacttataaaatgtattttggtattcaaaaattaattgattttgatgg--attcttttatggaatggattttgagagacttttt 3634465  T
Q  516 ggttaaaaatgtgaataatatgctcattcaacaatctcacaaaaat 561  Q
     |||||||||||||| |   | |||||||||||||||||| |||||    
T  3634466 agttaaaaatgtgaacacattcctcattcaacaatctcactaaaat 3634511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 761 - 862
Target Start/End: Complemental strand, 10366313 - 10366212
Alignment:
Q  761 aatttacaagatgtagtcggtcagggtggtggtgcgacgagtgacaccagtcctccgcaccacctctaaacgccagatctgttagcgccgacgttaaggt 860  Q
    ||||| |||||||||| | || ||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||  ||||||||||||||||    
T  10366313 aatttgcaagatgtagccagttagggtggtggtgcaacgagtgacaccagtccttcgcaccacctctaaacaccagatctgtaggcgccgacgttaaggt 10366214  T
Q  861 tg 862  Q
    ||    
T  10366213 tg 10366212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 131 - 311
Target Start/End: Original strand, 28230567 - 28230745
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| |||| |||| ||||| ||||||||||  ||||||||||||||||||||| ||||||| || ||| ||||||| ||||||    
T  28230567 cggattatgtaatccggaaacatcaagtaacgcgccctattttttgaagtttccggattacaaaatccgg-aaaaatccgttactcatttttt-accctt 28230664  T
Q  231 taacaaaggaaaacatcatttcggattataaaatccaaaactttaagggcattttttgaaaaaatagggcatgcgaggaaa 311  Q
    ||||||| ||||||| ||||  |||||||||||||| |||  | |||||||||||  | |||||||| ||  |||||||||    
T  28230665 taacaaaagaaaacaccattctggattataaaatccgaaaactcaagggcattttcgggaaaaatagagcgcgcgaggaaa 28230745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 726 - 830
Target Start/End: Complemental strand, 36583185 - 36583082
Alignment:
Q  726 gcttacacctttttgcacccgttatccaaaccctcaatttacaagatgtagtcggtcagggtggtggtgcgacgagtgacaccagtcctccgcaccacct 825  Q
    ||||||||||| || ||||| | |||||||||| ||||| ||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||    
T  36583185 gcttacaccttcttccaccc-taatccaaacccccaattcacaagatgtagtcagttagggtggtggtgcgacgagtgacaccagtcctccacaccacct 36583087  T
Q  826 ctaaa 830  Q
    |||||    
T  36583086 ctaaa 36583082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 131 - 286
Target Start/End: Original strand, 24042287 - 24042441
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||||||| ||||||||||||||||  ||||||||||||||||||||| ||||| | ||||||   |||||||||||     
T  24042287 cggattatgtaatccggaaacatcatgtaacgcgccttattttttgaagtttccggattacaaaatccgg-aaaaacccgtaactccatttttcacccta 24042385  T
Q  231 taacaaaggaaaacatcatttcggattataaaatccaaaactttaagggcattttt 286  Q
    || |||||||||||| |||| || ||||| |||| || ||  | ||||||||||||    
T  24042386 tatcaaaggaaaacaccattccgaattatgaaattcagaaactcaagggcattttt 24042441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 131 - 260
Target Start/End: Original strand, 37518394 - 37518522
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | |||  ||||||||  |||| ||||||||||  |||| |||||| |||||||||||||| || || ||||||||||||||||||    
T  37518394 cggattatgtaatccggaaacttcatgtaacacgccctattttttgaagtttctggattataaaatccggaaaaa-tccgttacttattttttcaccctt 37518492  T
Q  231 taacaaaggaaaacatcatttcggattata 260  Q
    ||| ||| ||||||||||||| ||||||||    
T  37518493 taataaaagaaaacatcattttggattata 37518522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 129 - 293
Target Start/End: Complemental strand, 6467759 - 6467594
Alignment:
Q  129 ttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccgga--ttacaaaatccggaaaaaatctgtaacttattttttcac 226  Q
    |||||||||||||||| ||| |||||||||||  | || |||||||||||||||| |||  ||||| ||| ||| ||||||| |||||| | ||||||||    
T  6467759 ttcggattatgtaatccgaacaaatcatgtaacacaccctattttttgagatttctggattttacataattcgg-aaaaatccgtaactca-tttttcac 6467662  T
Q  227 cctttaacaaaggaaaacatcatttcggattataaaatcc-aaaactttaagggcattttttgaaaaa 293  Q
    | ||||||||||||||||| |||| || || |||||||||  |||||| |||||||||||| ||||||    
T  6467661 catttaacaaaggaaaacaccattccgaatcataaaatccggaaacttcaagggcatttttggaaaaa 6467594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 131 - 286
Target Start/End: Complemental strand, 47202554 - 47202399
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||||||| ||||| ||||||||||  ||| |||||||||||||| || ||||||| ||||||   |||||||||||     
T  47202554 cggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagttttcggattacaaaatctgg-aaaaatccgtaactccatttttcacccta 47202456  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc-aaaactttaagggcattttt 286  Q
    ||||||| ||||||| |||| |||||||| ||||||  |||| | ||||||||||||    
T  47202455 taacaaaagaaaacaccattccggattatgaaatccggaaacctcaagggcattttt 47202399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 131 - 337
Target Start/End: Original strand, 36468636 - 36468840
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| |||| | ||||||||  |||| ||||||||||  |||||  |||||||||||||| ||||||| || ||| ||||||||| ||||    
T  36468636 cggattatgtaatctgaaaca-tcatgtaacacgccctattttttgaagtttccatattacaaaatccgg-aaaaatccgttactcattttttca-cctt 36468732  T
Q  231 taacaaaggaaaacatcatttcggattataaaatccaaaactttaagggcattttt-tgaaaaaatagggcatgcgaggaaagccataagatgggaaaag 329  Q
    ||||||| |||||||||||| || ||||||||||    || || ||||||||||||   ||||||||| ||  ||||| ||| ||||| | |||||||||    
T  36468733 taacaaaagaaaacatcattccgaattataaaatttggaaattcaagggcatttttgaaaaaaaatagagcgcgcgagtaaacccatagggtgggaaaag 36468832  T
Q  330 taaatccc 337  Q
    ||||||||    
T  36468833 taaatccc 36468840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 128 - 226
Target Start/End: Complemental strand, 8154962 - 8154865
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcac 226  Q
    ||||||||||||||||| | ||| ||||||||| ||||| ||||||||||  |||||||||||||||||||||| |||||| |||||||  ||||||||    
T  8154962 tttcggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccgga-aaaatccgtaacttcatttttcac 8154865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 136 - 266
Target Start/End: Original strand, 42877149 - 42877278
Alignment:
Q  136 tatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaaca 235  Q
    ||||||||| | ||| || |||||| ||||| ||||||||    ||||| ||||||||||||||||||||  | || ||| |||||||||||||||||||    
T  42877149 tatgtaatccggaaacattatgtaacgcgccctattttttttattttcccgattacaaaatccggaaaaacac-gttactcattttttcaccctttaaca 42877247  T
Q  236 aaggaaaacatcatttcggattataaaatcc 266  Q
    || |||||||||||| ||||||||| |||||    
T  42877248 aaagaaaacatcattccggattatataatcc 42877278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 131 - 266
Target Start/End: Complemental strand, 36408431 - 36408298
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaactta-ttttttcaccct 229  Q
    |||||||||||||| | ||| ||||||||  ||||||||||||||||  |||| ||||||||||||||||| |||||| || ||| | ||||||||||||    
T  36408431 cggattatgtaatccggaaacatcatgtatcgcgccttattttttgaagtttctggattacaaaatccgga-aaaatccgttactcatttttttcaccct 36408333  T
Q  230 ttaacaaaggaaaacatcatttcggattataaaatcc 266  Q
    |||||||  ||||||| |||||   ||||||||||||    
T  36408332 ttaacaa--gaaaacaccattttaaattataaaatcc 36408298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 26555138 - 26555241
Alignment:
Q  129 ttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccg-gaaaaaatctgtaacttattttttcacc 227  Q
    ||||||||| ||||||  |||||||||||||| ||||| ||||||||| ||| | ||||||||||||||||  ||||||||  ||||| |||||||||||    
T  26555138 ttcggattaggtaatccaaaaaaatcatgtaacgcgccctattttttgtgatattcggattacaaaatccgaaaaaaaatccttaactaattttttcacc 26555237  T
Q  228 cttt 231  Q
    ||||    
T  26555238 cttt 26555241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 9151850 - 9151774
Alignment:
Q  155 atgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacccttta 232  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||| |||| |||| ||| ||||||||||||||||    
T  9151850 atgtaatgcgccctattttttgaagtttccggattacaaaatccgga-aaaacctgttactcattttttcacccttta 9151774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 28349236 - 28349384
Alignment:
Q  184 cggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaacatcatttcggattataaaatccaaaactttaagggcatt 283  Q
    ||||||||||||| | |||||| || |||||| ||||||||||| |||||||||| |||||| |||||| |||||| ||||||  ||   |||||| |||    
T  28349236 cggattacaaaattcagaaaaattc-gtaactcattttttcaccatttaacaaagaaaaacaccatttccgattatgaaatccggaaacgtaagggtatt 28349334  T
Q  284 ttttgaaaaaatagggcatgcgaggaaagccataagatgggaaaagtaaa 333  Q
    |||  |||||||||| | || |||||||  |||| | |||||||||||||    
T  28349335 tttgaaaaaaataggacgtgtgaggaaaatcatagggtgggaaaagtaaa 28349384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 133 - 296
Target Start/End: Complemental strand, 36629263 - 36629100
Alignment:
Q  133 gattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacccttta 232  Q
    |||||||||||| | ||| ||||||||| ||||| |||||||| |  || || |||||||||||||||| |||||| || ||| ||||||||||||| ||    
T  36629263 gattatgtaatccggaaacatcatgtaacgcgccctatttttttaagttaccagattacaaaatccgga-aaaatccgttactcattttttcaccctcta 36629165  T
Q  233 ac-aaaggaaaacatcatttcggattataaaatccaaaactttaagggcattttttgaaaaaata 296  Q
    || |||| |||||| |||| |  ||||||||||||  ||  | || ||||||||| |||||||||    
T  36629164 acaaaagaaaaacaccattccatattataaaatccggaaactcaatggcatttttggaaaaaata 36629100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 237
Target Start/End: Original strand, 33574130 - 33574238
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacc 227  Q
    ||||||||||||||||| ||||| ||||||||| || || |||||||| |  |||||||||||||||||||  ||||||||  ||||||  ||||||||     
T  33574130 tttcggattatgtaatccgaaaacatcatgtaacgcaccctattttttaaagtttccggattacaaaatcc-aaaaaaatccataacttcatttttcact 33574228  T
Q  228 ctttaacaaa 237  Q
    || |||||||    
T  33574229 ctataacaaa 33574238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 250
Target Start/End: Original strand, 3304858 - 3304976
Alignment:
Q  132 ggattatgtaatcagaaaaaatcatgtaatgcgccttatttttt-gagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    ||||||||||||| | ||| |||||||||  | || |||||||| ||  |||| ||||||||||||||||||||| || ||||||   |||||||||||     
T  3304858 ggattatgtaatccggaaatatcatgtaacacaccctatttttttgaagtttctggattacaaaatccggaaaaa-tccgtaactccatttttcacccta 3304956  T
Q  231 taacaaaggaaaacatcatt 250  Q
    ||||||||||||||| ||||    
T  3304957 taacaaaggaaaacaccatt 3304976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 422 - 556
Target Start/End: Complemental strand, 46037264 - 46037132
Alignment:
Q  422 gatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacattttggttaa 521  Q
    |||||||||  |||||| || ||||  | ||||||||||| |  ||||||||| ||||||  ||||  |||||||| |||||||||||| |||| |||||    
T  46037264 gatttctcatgacttatgaattgtctattggtattcaaaagtctatagattttgatggat--tcttggatggaatggattttgtgagactttttagttaa 46037167  T
Q  522 aaatgtgaataatatgctcattcaacaatctcaca 556  Q
    |||| | |||||||  ||||| |||||||||||||    
T  46037166 aaatataaataatactctcatccaacaatctcaca 46037132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 286
Target Start/End: Complemental strand, 28346191 - 28346053
Alignment:
Q  147 aaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaacat 246  Q
    ||||||||||||| ||  || || |||||||  |||| |||||||||||| |||||| | || |||||| |||||||  | |||||||||||||||||||    
T  28346191 aaaaaatcatgtagtgaaccctactttttgaagtttctggattacaaaattcggaaaca-tccgtaactcattttttt-ctctttaacaaaggaaaacat 28346094  T
Q  247 catttcggattataaaatcca-aaactttaagggcattttt 286  Q
    |||| | |||||| |||| || |||||| || |||||||||    
T  28346093 cattccagattatgaaattcagaaacttcaaaggcattttt 28346053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 266
Target Start/End: Complemental strand, 31643101 - 31642967
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| |||||||||  | || ||||||||||  |||||  ||||||| |||| |||||| || ||||||   |||||||||||     
T  31643101 cggattatgtaatccggaaacatcatgtaacacaccctattttttgaagtttccaaattacaagatccagaaaaa-tccgtaactccatttttcacccta 31643003  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||| ||||||| |||| | |||||| ||||||    
T  31643002 taacaaacgaaaacaccattccagattatgaaatcc 31642967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 31985615 - 31985685
Alignment:
Q  129 ttcggattatgtaatcagaaaaaatcatgtaatgcgcctta--ttttttgagatttccggattacaaaatc 197  Q
    |||| ||||||||||| ||||||||||||||| ||||| ||  ||||||||| ||| ||||||||||||||    
T  31985615 ttcgaattatgtaatccgaaaaaatcatgtaacgcgccctattttttttgaggttttcggattacaaaatc 31985685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 482 - 562
Target Start/End: Complemental strand, 9825284 - 9825204
Alignment:
Q  482 attcttttatggaatgaattttgtgagacattttggttaaaaatgtgaataatatgctcattcaacaatctcacaaaaatt 562  Q
    |||||||||| ||||| ||||| |||||| ||||  ||||||||||||| |  || || |||||||||||| |||||||||    
T  9825284 attcttttatagaatggattttatgagactttttaattaaaaatgtgaacataatacttattcaacaatcttacaaaaatt 9825204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 482 - 562
Target Start/End: Complemental strand, 10727209 - 10727129
Alignment:
Q  482 attcttttatggaatgaattttgtgagacattttggttaaaaatgtgaataatatgctcattcaacaatctcacaaaaatt 562  Q
    |||||||||| ||||| ||||| |||||| ||||  ||||||||||||| |  || || |||||||||||| |||||||||    
T  10727209 attcttttatagaatggattttatgagactttttaattaaaaatgtgaacataatacttattcaacaatcttacaaaaatt 10727129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 285
Target Start/End: Original strand, 31985680 - 31985763
Alignment:
Q  203 aaaatctgtaacttattttttcaccctttaacaaaggaaaacatcatttcggattataaaatcc-aaaactttaagggcatttt 285  Q
    ||||||||||||| ||||||||| | | |||||||||||||  | | |||||||||| |||||| |||| || |||||||||||    
T  31985680 aaaatctgtaactcattttttcatcttataacaaaggaaaaactgaattcggattatgaaatccgaaaatttcaagggcatttt 31985763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 431 - 525
Target Start/End: Complemental strand, 42678098 - 42678006
Alignment:
Q  431 caacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacattttggttaaaaat 525  Q
    ||||||||||||||||  | |||||||||||||    ||||||||||||  |||||||| | ||||| ||||| |||||| |||| |||||||||    
T  42678098 caacttataaaatgtctattggtattcaaaaatctgcagattttaatgg--attcttttgtagaatggattttatgagactttttagttaaaaat 42678006  T

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Target: scaffold0725 (Bit Score: 78; Significance: 7e-36; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 749 - 862
Target Start/End: Complemental strand, 1639 - 1526
Alignment:
Q  749 atccaaaccctcaatttacaagatgtagtcggtcagggtggtggtgcgacgagtgacaccagtcctccgcaccacctctaaacgccagatctgttagcgc 848  Q
    |||||||||||||||| ||||||||||| |||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||  | ||    
T  1639 atccaaaccctcaattcacaagatgtagccggttagggtggtggtgcgactagtgacaccagtcctctgcaccacctctaaacgccagatctgtcggggc 1540  T
Q  849 cgacgttaaggttg 862  Q
    | ||||||||||||    
T  1539 caacgttaaggttg 1526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 72; Significance: 3e-32; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 131 - 337
Target Start/End: Original strand, 3494 - 3701
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatct-gtaacttattttttcaccct 229  Q
    |||||||||||||| | ||| ||||||||| ||||| ||||||||||  ||||  ||||||||||| || ||||||  | || ||| |||||||||||||    
T  3494 cggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttctagattacaaaattcgaaaaaaaattcgttactcattttttcaccct 3593  T
Q  230 ttaacaaaggaaaacatcatttcggattataaaatccaaaactttaagggcattttttgaaaaaatagggcatgcgaggaaagccataagatgggaaaag 329  Q
    |||||||| ||||||| |||| |||||||||| || |  ||  | |||||||||||| |||||||||||||  ||||||||| ||| | | |||||||||    
T  3594 ttaacaaaagaaaacaccattccggattataagattcggaaactcaagggcatttttggaaaaaatagggcgcgcgaggaaacccaaagggtgggaaaag 3693  T
Q  330 taaatccc 337  Q
    ||||||||    
T  3694 taaatccc 3701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 70; Significance: 4e-31; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 749 - 842
Target Start/End: Complemental strand, 27555 - 27462
Alignment:
Q  749 atccaaaccctcaatttacaagatgtagtcggtcagggtggtggtgcgacgagtgacaccagtcctccgcaccacctctaaacgccagatctgt 842  Q
    |||||||||||||||| ||||||||||| |||| |||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||    
T  27555 atccaaaccctcaattcacaagatgtagccggttagggtggtggtgcgactaatgacaccagtcctctgcaccacctctaaacgccagatctgt 27462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 67; Significance: 3e-29; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 416 - 561
Target Start/End: Complemental strand, 11717 - 11574
Alignment:
Q  416 aattaggatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacatttt 515  Q
    ||||| ||||||||||||||||||||||||  || |||||||||||||| || |||||| ||||  |||||||||||||||| |||||| ||||| ||||    
T  11717 aattaagatttctcacaacttataaaatgtattttggtattcaaaaattaattgattttgatgg--attcttttatggaatggattttgagagacttttt 11620  T
Q  516 ggttaaaaatgtgaataatatgctcattcaacaatctcacaaaaat 561  Q
     |||||||||||||| |   | |||||||||||||||||| |||||    
T  11619 agttaaaaatgtgaacacattcctcattcaacaatctcactaaaat 11574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 3e-29; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 128 - 266
Target Start/End: Complemental strand, 7412891 - 7412754
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacc 227  Q
    ||||||||||||||||| | ||| |||||||||  |||| ||||||||||  |||||||||||||||||||||| |||| | || ||| |||||||||||    
T  7412891 tttcggattatgtaatccggaaacatcatgtaacacgccctattttttgaagtttccggattacaaaatccgga-aaaacccgttactcattttttcacc 7412793  T
Q  228 ctttaacaaaggaaaacatcatttcggattataaaatcc 266  Q
    |||||||||| |||||||||||| | ||||||| |||||    
T  7412792 ctttaacaaaagaaaacatcattccagattatataatcc 7412754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 749 - 862
Target Start/End: Complemental strand, 9567341 - 9567228
Alignment:
Q  749 atccaaaccctcaatttacaagatgtagtcggtcagggtggtggtgcgacgagtgacaccagtcctccgcaccacctctaaacgccagatctgttagcgc 848  Q
    |||||||||||||||| ||||||||||| | ||  |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| | | |||    
T  9567341 atccaaaccctcaattcacaagatgtagcctgttcgggtggtgttgcgacgagtgacaccagtcctccgcaccacctctaaacgccaaatctatcaacgc 9567242  T
Q  849 cgacgttaaggttg 862  Q
    |  |||||||||||    
T  9567241 cagcgttaaggttg 9567228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 131 - 270
Target Start/End: Complemental strand, 17264470 - 17264332
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||||||| ||||| ||||||||||  ||||| |||||||||||||||| |||||| || ||| |||||||||||||     
T  17264470 cggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccagattacaaaatccgga-aaaatccgttactcattttttcaccctg 17264372  T
Q  231 taacaaaggaaaacatcatttcggattataaaatccaaaa 270  Q
    ||||||| ||||||||||||  |||| ||| |||||||||    
T  17264371 taacaaaagaaaacatcattcaggatcatataatccaaaa 17264332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 131 - 337
Target Start/End: Original strand, 4508401 - 4508605
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||| ||||| | ||| |||||||||  |||| || ||||||| ||||| |||||| |||||||||||||| || || ||| |||||||||||||     
T  4508401 cggattatataatccggaaacatcatgtaacacgccctaatttttgaaatttctggattataaaatccggaaaaa-tccgttactcattttttcaccctc 4508499  T
Q  231 taacaaaggaaaacatcatttcggattataaaatccaaaactttaagggcattttttgaaaaaatagggcatgcgaggaaagccataagatgggaaaagt 330  Q
    ||||||| ||||||| ||||  ||||||||||||||  ||  |||||| || |||||| |||||||||||  ||||||||| ||| | | ||||||||||    
T  4508500 taacaaaagaaaacaccattctggattataaaatccggaaacttaaggaca-tttttggaaaaatagggcgcgcgaggaaacccacagggtgggaaaagt 4508598  T
Q  331 aaatccc 337  Q
    || ||||    
T  4508599 aactccc 4508605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 129 - 300
Target Start/End: Original strand, 24604459 - 24604632
Alignment:
Q  129 ttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaactta-ttttttcacc 227  Q
    |||||||||||||||| ||| |||||||||||  |||| ||||||||||  |||  |||||||||||| ||| |||||||  ||||| | ||||||||||    
T  24604459 ttcggattatgtaatccgaagaaatcatgtaagacgccctattttttgaagtttttggattacaaaattcgg-aaaaatccttaactcatttttttcacc 24604557  T
Q  228 ctttaacaaaggaaaacatcatttcggattataaaatcc-aaaactttaagggcattttttgaaaa-aatagggc 300  Q
    || | ||||||||||||| || |||||| ||| |||||| ||||||| |||| ||||||||||||| ||||||||    
T  24604558 ctatgacaaaggaaaacaccagttcggaatatgaaatccgaaaacttcaaggacattttttgaaaataatagggc 24604632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 131 - 266
Target Start/End: Complemental strand, 5699618 - 5699484
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||||||| ||||| |||||||| |  ||||||||||||||||| | ||||||| | ||||||   |||||||||||     
T  5699618 cggattatgtaatccggaaacatcatgtaacgcgccctattttttcaagtttccggattacaaaattc-gaaaaaacccgtaactccatttttcacccta 5699520  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||||||||||| |||| |||||||| ||||||    
T  5699519 taacaaaggaaaacaccattccggattatgaaatcc 5699484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 131 - 266
Target Start/End: Complemental strand, 32035173 - 32035039
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||||||| ||||| ||||||||||  |||||||||||||||||||||| |||||| ||||||   ||||||| | |     
T  32035173 cggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccgga-aaaatccgtaactccatttttcatcata 32035075  T
Q  231 taacaaaggaaaacatcatttcggattataaaatcc 266  Q
    ||||||| |||||||||||| | |||||| ||||||    
T  32035074 taacaaaagaaaacatcattccagattatgaaatcc 32035039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 498 - 634
Target Start/End: Complemental strand, 11007081 - 11006944
Alignment:
Q  498 aattttgtgagacattttggttaaaaatgtgaataatatgctcattcaacaatctcacaaaaattggtgagactctcacaattttcttttccgtgttgtc 597  Q
    |||||| | ||||||||| |||||||||||||| |  || ||||||||||||||||||||||||  | ||||||||| || |||||||||||||| || |    
T  11007081 aattttataagacattttagttaaaaatgtgaacacaatactcattcaacaatctcacaaaaatctgagagactctcgcagttttcttttccgtgctgcc 11006982  T
Q  598 caacaagagt-cattttctcattagtttccaggtgcac 634  Q
    |||||| | | |||||| |||||||||| || ||||||    
T  11006981 caacaaaattccattttatcattagttttcatgtgcac 11006944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 131 - 332
Target Start/End: Complemental strand, 23406856 - 23406656
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    ||||||||||||||   ||| ||||  ||| ||||| ||||||||||  |||||||||||| |||| |||||||| || ||||||   |||||||||||     
T  23406856 cggattatgtaatccagaaacatcaactaacgcgccctattttttgaagtttccggattacgaaattcggaaaaactc-gtaactccatttttcacccta 23406758  T
Q  231 taacaaaggaaaacatcatttcggattataaaatccaaaactttaagggcattttttgaaaaaatagggcatgcgaggaaagccataagatgggaaaagt 330  Q
    ||||||||||||||| |||| |||||||  ||||||  ||  | || |||||||||  ||||||||||||  ||||||||| ||| | | ||||||||||    
T  23406757 taacaaaggaaaacaccattccggattacgaaatccggaaaatcaatggcatttttgaaaaaaatagggcccgcgaggaaatccacagggtgggaaaagt 23406658  T
Q  331 aa 332  Q
    ||    
T  23406657 aa 23406656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 132 - 243
Target Start/End: Original strand, 14587660 - 14587770
Alignment:
Q  132 ggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacccttt 231  Q
    ||||||||||||||| ||| ||||||||| ||||| |||||||| |  ||| ||||||||||||||||| |||||||  | ||| |||||||||||||||    
T  14587660 ggattatgtaatcaggaaacatcatgtaacgcgccctattttttaaagttttcggattacaaaatccgg-aaaaatcccttactcattttttcacccttt 14587758  T
Q  232 aacaaaggaaaa 243  Q
    |||||| |||||    
T  14587759 aacaaaagaaaa 14587770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 131 - 266
Target Start/End: Original strand, 2813323 - 2813459
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaa--atccggaaaaaatctgtaacttattttttcaccc 228  Q
    |||||||||||||| | ||| |||||||||  | |||||||||||||  |||||||||||||||  |||||| ||||||||||||||   ||||||||||    
T  2813323 cggattatgtaatccggaaacatcatgtaacacaccttattttttgaagtttccggattacaaaatatccgg-aaaaatctgtaactccatttttcaccc 2813421  T
Q  229 tttaacaaaggaaaacatcatttcggattataaaatcc 266  Q
    | ||| ||||||||||| |||| || ||||| ||||||    
T  2813422 tataataaaggaaaacaccattccgaattatgaaatcc 2813459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 133 - 294
Target Start/End: Original strand, 33413448 - 33413608
Alignment:
Q  133 gattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacccttta 232  Q
    |||||||||||| | ||| ||||||||| ||||| |||||||  || ||||||||||||||||| | |||||| || ||||||   ||||||||||| ||    
T  33413448 gattatgtaatctggaaacatcatgtaacgcgccctatttttgaag-tttccggattacaaaattcagaaaaattc-gtaactccatttttcaccctata 33413545  T
Q  233 acaaaggaaaacatcatttcggattataaaatcc-aaaactttaagggcattttttgaaaaaa 294  Q
    ||||||||||||| |||| |||||||| ||||||  |||| | || ||||||||| |||||||    
T  33413546 acaaaggaaaacaccattccggattatgaaatccggaaacatcaaaggcatttttggaaaaaa 33413608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 133 - 294
Target Start/End: Original strand, 3717384 - 3717544
Alignment:
Q  133 gattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacccttta 232  Q
    |||||| ||||| | ||| ||||||||| ||||| || |||||||  ||||||||||||||||| |||||||   |  || || ||||||||||||||||    
T  3717384 gattatataatccggaaacatcatgtaacgcgccctaatttttgaagtttccggattacaaaattcggaaaagcccatta-ctcattttttcacccttta 3717482  T
Q  233 acaaaggaaaacatcatttcggattataaaatccaaaactttaagggcattttttgaaaaaa 294  Q
    ||||| ||||||| ||||   |||||||||||||  ||  | |||||||||||| |||||||    
T  3717483 acaaaagaaaacaccattcaagattataaaatccggaaactcaagggcatttttggaaaaaa 3717544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 9905180 - 9905104
Alignment:
Q  129 ttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaa 205  Q
    |||||||||||||||| | |||||||| |||  ||||| |||||||||| ||||||| |||||||||||||||||||    
T  9905180 ttcggattatgtaatccggaaaaatcacgtagcgcgccctattttttgaaatttccgaattacaaaatccggaaaaa 9905104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 266
Target Start/End: Original strand, 1945630 - 1945763
Alignment:
Q  133 gattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacccttta 232  Q
    |||||| ||||| | |||| | |||||| || || || |||||||  ||| ||||||||||||||||| ||||||| |||||| |||||||||||||||     
T  1945630 gattatataatccggaaaatttatgtaacgcaccctagtttttgaagttttcggattacaaaatccgg-aaaaatccgtaactcattttttcaccctttg 1945728  T
Q  233 ac-aaaggaaaacatcatttcggattataaaatcc 266  Q
     | |||| |||||| |||| |||||||||||||||    
T  1945729 tcaaaagaaaaacaccattccggattataaaatcc 1945763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 451 - 561
Target Start/End: Original strand, 709113 - 709221
Alignment:
Q  451 ggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacattttggttaaaaatgtgaataatatgctcattcaacaat 550  Q
    ||||||||||| |  ||||||||| ||||||  ||||  ||| |||| |||||||||||| |||| ||||||||| | |||||||  ||||| |||||||    
T  709113 ggtattcaaaagtctatagattttgatggat--tcttggatgtaatggattttgtgagactttttagttaaaaatataaataatactctcatccaacaat 709210  T
Q  551 ctcacaaaaat 561  Q
    |||||| ||||    
T  709211 ctcacacaaat 709221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 192 - 294
Target Start/End: Complemental strand, 5638878 - 5638776
Alignment:
Q  192 aaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaacatcatttcggattataaaatcc-aaaactttaagggcattttttgaa 290  Q
    |||||||||||||| || ||||||   ||||||||||| ||||| ||||||||| |||| |||||||| ||||||  |||| | |||||||||||| |||    
T  5638878 aaaatccggaaaaa-tccgtaactctatttttcaccctataacagaggaaaacaccattccggattatgaaatccggaaacctcaagggcatttttggaa 5638780  T
Q  291 aaaa 294  Q
    ||||    
T  5638779 aaaa 5638776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 416 - 560
Target Start/End: Original strand, 5957293 - 5957435
Alignment:
Q  416 aattaggatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacatttt 515  Q
    ||||| |||||||||  |||||| || ||||  | ||||||||||| |  ||||||||||||  ||||| |||  |  |||| |||||||||||| ||||    
T  5957293 aattaagatttctcatgacttatgaattgtctattggtattcaaaagtctatagattttaat--atattttttcgtataatggattttgtgagacttttt 5957390  T
Q  516 ggttaaaaatgtgaataatatgctcattcaacaatctcacaaaaa 560  Q
     |||||||||    || |||||||||||||| |||||||||||||    
T  5957391 agttaaaaatacacatgatatgctcattcaataatctcacaaaaa 5957435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 422 - 525
Target Start/End: Original strand, 7100334 - 7100435
Alignment:
Q  422 gatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacattttggttaa 521  Q
    |||||||||  |||||| || ||||| | ||||||||||| |  ||||||||| ||||||  ||||  |||||||| |||||||||||| |||| |||||    
T  7100334 gatttctcatgacttatgaattgtccattggtattcaaaagtctatagattttgatggat--tcttggatggaatggattttgtgagactttttagttaa 7100431  T
Q  522 aaat 525  Q
    ||||    
T  7100432 aaat 7100435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 422 - 525
Target Start/End: Complemental strand, 8794296 - 8794195
Alignment:
Q  422 gatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacattttggttaa 521  Q
    |||||||||  |||||| || ||||| | ||||||||||| |  ||||||||| ||||||  ||||  |||||||| |||||||||||| |||| |||||    
T  8794296 gatttctcatgacttatgaattgtccattggtattcaaaagtctatagattttgatggat--tcttggatggaatggattttgtgagactttttagttaa 8794199  T
Q  522 aaat 525  Q
    ||||    
T  8794198 aaat 8794195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 432 - 515
Target Start/End: Complemental strand, 10009544 - 10009463
Alignment:
Q  432 aacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacatttt 515  Q
    ||||||||||||||| || |||| |||||| |   ||||||||||| |||  |||||| |||||||||||||||||||| ||||    
T  10009544 aacttataaaatgtcttttggtagtcaaaagtatttagattttaatagat--tcttttgtggaatgaattttgtgagacttttt 10009463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 304835 - 304878
Alignment:
Q  289 aaaaaatagggcatgcgaggaaagccataagatgggaaaagtaa 332  Q
    |||||||||||| ||||||||||| ||||||||| |||||||||    
T  304835 aaaaaatagggcgtgcgaggaaagacataagatgagaaaagtaa 304878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 749 - 804
Target Start/End: Original strand, 12330532 - 12330586
Alignment:
Q  749 atccaaaccctcaatttacaagatgtagtcggtcagggtggtggtgcgacgagtga 804  Q
    |||||||||||||||||| | |||||| | ||||| ||||||||||||||||||||    
T  12330532 atccaaaccctcaatttatatgatgtaattggtca-ggtggtggtgcgacgagtga 12330586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 59; Significance: 2e-24; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 131 - 265
Target Start/End: Original strand, 142062 - 142194
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||||||||| | ||| ||||||||| ||||| ||||||||||  |||||||||||||||||| || |||||||||| ||  | ||||||||||||    
T  142062 cggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatctgg-aaaaatctgttacaca-tttttcaccctt 142159  T
Q  231 taacaaaggaaaacatcatttcggattataaaatc 265  Q
    ||||||| |||||||||||| || |||||| ||||    
T  142160 taacaaaagaaaacatcattccgaattatataatc 142194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 51; Significance: 9e-20; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 128 - 266
Target Start/End: Original strand, 9593 - 9730
Alignment:
Q  128 tttcggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcacc 227  Q
    ||||||||||||||||| | ||| ||||||||| ||| | ||||||||||  ||||||||||||||||| ||| ||||| | ||||||   |||||||||    
T  9593 tttcggattatgtaatccggaaacatcatgtaacgcgtcctattttttgaagtttccggattacaaaattcgg-aaaaacccgtaactctatttttcacc 9691  T
Q  228 ctttaacaaaggaaaacatcatttcggattataaaatcc 266  Q
    || |||||||||||||||  ||| || ||||| ||||||    
T  9692 ctataacaaaggaaaacacaattccgaattatgaaatcc 9730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 131 - 265
Target Start/End: Complemental strand, 23182 - 23050
Alignment:
Q  131 cggattatgtaatcagaaaaaatcatgtaatgcgccttattttttgagatttccggattacaaaatccggaaaaaatctgtaacttattttttcaccctt 230  Q
    |||||||| ||||| | ||| |||||||||||| || ||||||||||  ||||||||||| ||||| ||| ||||||| || ||| | ||||||||||||    
T  23182 cggattatataatccggaaacatcatgtaatgcaccctattttttgaagtttccggattataaaattcgg-aaaaatccgttactca-tttttcaccctt 23085  T
Q  231 taacaaaggaaaacatcatttcggattataaaatc 265  Q
     |||||| |||||||| ||| ||||||||| ||||    
T  23084 caacaaaagaaaacataattacggattatataatc 23050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 187 - 266
Target Start/End: Complemental strand, 140612 - 140534
Alignment:
Q  187 attacaaaatccggaaaaaatctgtaacttattttttcaccctttaacaaaggaaaacatcatttcggattataaaatcc 266  Q
    |||||||||||||||||||  || || || ||||||||||| ||||||||| |||||||||||| ||||||||| |||||    
T  140612 attacaaaatccggaaaaatccttta-ctcattttttcaccttttaacaaaagaaaacatcattccggattatataatcc 140534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 431 - 560
Target Start/End: Complemental strand, 1790 - 1663
Alignment:
Q  431 caacttataaaatgtccttcggtattcaaaaattgatagattttaatggatattcttttatggaatgaattttgtgagacattttggttaaaaatgtgaa 530  Q
    ||||||||||||||||  | |||||||||||||    ||||||||||||||  |||||| | ||||| |||||||||||| |||| |||||||||         
T  1790 caacttataaaatgtctattggtattcaaaaatctgcagattttaatggat--tcttttgtagaatggattttgtgagactttttagttaaaaatacact 1693  T
Q  531 taatatgctcattcaacaatctcacaaaaa 560  Q
    | | ||||| ||||||||||||||||||||    
T  1692 tgacatgctaattcaacaatctcacaaaaa 1663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 205642 - 205680
Alignment:
Q  78 cggattacgtaatccggattgcatcagcaccatgaaaaa 116  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  205642 cggattacgtaatccggattgcattagcactatgaaaaa 205680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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