View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7461_low_25 (Length: 278)

Name: NF7461_low_25
Description: NF7461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7461_low_25
NF7461_low_25
[»] chr1 (11 HSPs)
chr1 (88-259)||(5684255-5684426)
chr1 (10-74)||(5684140-5684204)
chr1 (10-72)||(26349993-26350055)
chr1 (10-72)||(2643829-2643892)
chr1 (10-72)||(43020629-43020692)
chr1 (22-71)||(48110559-48110609)
chr1 (22-74)||(29491500-29491553)
chr1 (22-74)||(38021282-38021335)
chr1 (26-74)||(41182808-41182857)
chr1 (24-72)||(42946481-42946530)
chr1 (22-74)||(47763397-47763450)
[»] chr3 (14 HSPs)
chr3 (15-72)||(6951805-6951862)
chr3 (22-72)||(53467979-53468029)
chr3 (22-72)||(27066640-27066691)
chr3 (10-72)||(28951884-28951947)
chr3 (22-72)||(50724397-50724448)
chr3 (22-72)||(50788400-50788451)
chr3 (22-71)||(13616089-13616139)
chr3 (22-74)||(362973-363026)
chr3 (18-70)||(2995204-2995257)
chr3 (10-74)||(16985038-16985103)
chr3 (22-74)||(36331738-36331791)
chr3 (10-74)||(38555040-38555105)
chr3 (22-74)||(49146114-49146167)
chr3 (15-74)||(55318040-55318100)
[»] chr7 (6 HSPs)
chr7 (10-70)||(23799318-23799379)
chr7 (10-74)||(35498416-35498480)
chr7 (22-74)||(37449522-37449575)
chr7 (15-71)||(32814850-32814907)
chr7 (17-72)||(14102486-14102542)
chr7 (17-72)||(14412503-14412559)
[»] chr6 (8 HSPs)
chr6 (18-74)||(21507213-21507270)
chr6 (24-66)||(5694949-5694992)
chr6 (22-74)||(6143995-6144047)
chr6 (22-66)||(11982792-11982836)
chr6 (26-72)||(7233999-7234046)
chr6 (22-72)||(19279479-19279530)
chr6 (22-70)||(34571408-34571456)
chr6 (10-70)||(6219372-6219432)
[»] chr2 (12 HSPs)
chr2 (26-74)||(36386126-36386174)
chr2 (22-71)||(17239931-17239981)
chr2 (22-71)||(25731964-25732014)
chr2 (11-74)||(4529775-4529839)
chr2 (22-69)||(16973938-16973986)
chr2 (22-71)||(19052626-19052676)
chr2 (22-71)||(32891311-32891361)
chr2 (27-72)||(5207128-5207173)
chr2 (41-74)||(6498895-6498928)
chr2 (14-74)||(37123208-37123269)
chr2 (22-74)||(44422137-44422190)
chr2 (11-70)||(19352885-19352945)
[»] chr4 (15 HSPs)
chr4 (22-72)||(32885718-32885769)
chr4 (15-72)||(44272959-44273017)
chr4 (18-72)||(31601832-31601887)
chr4 (22-72)||(37032193-37032244)
chr4 (18-72)||(43115294-43115349)
chr4 (26-71)||(9084793-9084839)
chr4 (24-66)||(46903366-46903408)
chr4 (22-74)||(8690244-8690297)
chr4 (18-74)||(26253978-26254035)
chr4 (15-72)||(32325358-32325415)
chr4 (15-72)||(42758178-42758235)
chr4 (22-74)||(47416498-47416551)
chr4 (18-74)||(48501670-48501727)
chr4 (22-74)||(26708564-26708616)
chr4 (22-73)||(53815726-53815778)
[»] chr5 (10 HSPs)
chr5 (22-72)||(22599950-22600000)
chr5 (12-72)||(18101963-18102024)
chr5 (8-72)||(31556834-31556899)
chr5 (18-72)||(2029142-2029197)
chr5 (22-74)||(4674827-4674880)
chr5 (22-74)||(6447492-6447545)
chr5 (22-74)||(36045146-36045199)
chr5 (18-74)||(37303960-37304017)
chr5 (12-72)||(37986881-37986942)
chr5 (26-74)||(38230217-38230265)
[»] chr8 (4 HSPs)
chr8 (22-74)||(10292382-10292435)
chr8 (22-72)||(17467308-17467358)
chr8 (22-74)||(1588797-1588850)
chr8 (15-70)||(29937233-29937289)
[»] scaffold0126 (1 HSPs)
scaffold0126 (19-72)||(22864-22917)
[»] scaffold0070 (1 HSPs)
scaffold0070 (22-74)||(12595-12648)
[»] scaffold0809 (1 HSPs)
scaffold0809 (22-74)||(4818-4870)
[»] scaffold0712 (1 HSPs)
scaffold0712 (10-69)||(4538-4598)
[»] scaffold0709 (1 HSPs)
scaffold0709 (10-69)||(4558-4618)


Alignment Details
Target: chr1 (Bit Score: 168; Significance: 4e-90; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 88 - 259
Target Start/End: Original strand, 5684255 - 5684426
Alignment:
Q  88 gtaatatttacaaaacacaaataattacattacatttaattaatgtttatgtggtatctagttgttgaaagtttatcaaatttcacaataaatgcaatca 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5684255 gtaatatttacaaaacacaaataattacattacatttaattaatgtttatgtggtatctagttgttgaaagtttatcaaatttcacaataaatgcaatca 5684354  T
Q  188 tctttaaaatatcataatgagatacatgagagcgtgtttaatcagtgattttttaagaagggaagcttgcac 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5684355 tctttaaaatatcataatgagatacatgagagcgtgtttaatcagtgatttgttaagaagggaagcttgcac 5684426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 5684140 - 5684204
Alignment:
Q  10 gcagagacatgtattattatatgcagggg-taggatttgaacctcggacaccccacttattcactt 74  Q
    ||||||||||| ||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||    
T  5684140 gcagagacatgcattattatatgcaggggttagga-ttgaacctcagacaccccacttattcactt 5684204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 26350055 - 26349993
Alignment:
Q  10 gcagagacatgtattattatatgcaggggtaggatttgaacctcggacaccccacttattcac 72  Q
    |||||||||||||||||||||||||||||| || || ||||| |  |||||||||||||||||    
T  26350055 gcagagacatgtattattatatgcaggggttgggttcgaaccccaaacaccccacttattcac 26349993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 2643892 - 2643829
Alignment:
Q  10 gcagagacatgtattattatatgcaggggt-aggatttgaacctcggacaccccacttattcac 72  Q
    ||||||||||| ||||||||||||| ||||  || |||||||| | ||||||||||||||||||    
T  2643892 gcagagacatgcattattatatgcatgggtcggggtttgaaccccagacaccccacttattcac 2643829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 43020629 - 43020692
Alignment:
Q  10 gcagagacatgtattattatatgcagggg-taggatttgaacctcggacaccccacttattcac 72  Q
    |||| |||||| ||||||||||||||||| | || || ||||||||||||||||||| ||||||    
T  43020629 gcagggacatgcattattatatgcaggggttggggttcgaacctcggacaccccactcattcac 43020692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 48110559 - 48110609
Alignment:
Q  22 attattatatgcaggggtaggattt-gaacctcggacaccccacttattca 71  Q
    |||||||||||||||||| ||| || |||||||||||||| ||||||||||    
T  48110559 attattatatgcaggggttggagttcgaacctcggacacctcacttattca 48110609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 29491500 - 29491553
Alignment:
Q  22 attattatatgcaggggtaggattt-gaacctcggacaccccacttattcactt 74  Q
    |||||||||||||||||| ||  || ||||| ||||||||||||||||||||||    
T  29491500 attattatatgcaggggtcggggttcgaaccccggacaccccacttattcactt 29491553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 38021282 - 38021335
Alignment:
Q  22 attattatatgcaggggtaggattt-gaacctcggacaccccacttattcactt 74  Q
    |||||||||||||||||  ||| || ||||| ||||||||||||||||||||||    
T  38021282 attattatatgcaggggccggagttcgaaccccggacaccccacttattcactt 38021335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 41182808 - 41182857
Alignment:
Q  26 ttatatgcaggggtagga-tttgaacctcggacaccccacttattcactt 74  Q
    |||||||||||||| ||  |||||||| ||||||||||||||||||||||    
T  41182808 ttatatgcaggggtcggggtttgaaccccggacaccccacttattcactt 41182857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 42946530 - 42946481
Alignment:
Q  24 tattatatgcagggg-taggatttgaacctcggacaccccacttattcac 72  Q
    ||||||||||||||| | || |||||||| ||||||||||||||||||||    
T  42946530 tattatatgcaggggctggggtttgaaccccggacaccccacttattcac 42946481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 47763450 - 47763397
Alignment:
Q  22 attattatatgcaggggtaggattt-gaacctcggacaccccacttattcactt 74  Q
    |||||||||||||||||  ||| || |||||||||||| |||||||||||||||    
T  47763450 attattatatgcaggggccggagttcgaacctcggacatcccacttattcactt 47763397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 6951862 - 6951805
Alignment:
Q  15 gacatgtattattatatgcaggggtaggatttgaacctcggacaccccacttattcac 72  Q
    |||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  6951862 gacatgcattattatatgcaggggtcggatttgaacctcggacaccgcacttattcac 6951805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 53467979 - 53468029
Alignment:
Q  22 attattatatgcaggggtaggatttgaacctcggacaccccacttattcac 72  Q
    |||||||||||||||||  || || ||||||||||||||||||||||||||    
T  53467979 attattatatgcaggggcggggttcgaacctcggacaccccacttattcac 53468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 27066640 - 27066691
Alignment:
Q  22 attattatatgcaggggt-aggatttgaacctcggacaccccacttattcac 72  Q
    |||||||||||||||||| ||| || ||||| ||||||||||||||||||||    
T  27066640 attattatatgcaggggtcagggttcgaaccccggacaccccacttattcac 27066691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 28951884 - 28951947
Alignment:
Q  10 gcagagacatgtattattatatgcaggggt-aggatttgaacctcggacaccccacttattcac 72  Q
    ||||| ||||| |||||||||||||||||| ||| || ||||| || |||||||||||||||||    
T  28951884 gcagatacatgcattattatatgcaggggtcagggttcgaaccccgaacaccccacttattcac 28951947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 50724397 - 50724448
Alignment:
Q  22 attattatatgcaggggtaggattt-gaacctcggacaccccacttattcac 72  Q
    |||||||||||||||||| ||  || ||||||||||||||||||||||||||    
T  50724397 attattatatgcaggggttggggttcgaacctcggacaccccacttattcac 50724448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 50788451 - 50788400
Alignment:
Q  22 attattatatgcaggggtaggattt-gaacctcggacaccccacttattcac 72  Q
    |||||||||||||||||| ||  || ||||||||||||||||||||||||||    
T  50788451 attattatatgcaggggttggggttcgaacctcggacaccccacttattcac 50788400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 13616139 - 13616089
Alignment:
Q  22 attattatatgcaggggtaggattt-gaacctcggacaccccacttattca 71  Q
    ||||||||||| |||||| ||| || |||||||||||||||||||||||||    
T  13616139 attattatatgtaggggtcggagttcgaacctcggacaccccacttattca 13616089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 362973 - 363026
Alignment:
Q  22 attattatatgcaggggtaggattt-gaacctcggacaccccacttattcactt 74  Q
    |||||||||||||||||| ||| || ||||| |||| |||||||||||||||||    
T  362973 attattatatgcaggggtcggagttcgaaccccggataccccacttattcactt 363026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 2995204 - 2995257
Alignment:
Q  18 atgtattattatatgcaggggtag-gatttgaacctcggacaccccacttattc 70  Q
    |||||||||||||||||||||| | |||| |||||||  |||||||||||||||    
T  2995204 atgtattattatatgcaggggtcgagattcgaacctcaaacaccccacttattc 2995257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 16985038 - 16985103
Alignment:
Q  10 gcagagacatgtattattatatgcaggggta-ggatttgaacctcggacaccccacttattcactt 74  Q
    ||||||||||  ||||||||||| ||||||  || ||||||||||| |||| ||||||||||||||    
T  16985038 gcagagacattcattattatatgtaggggtttgggtttgaacctcgaacactccacttattcactt 16985103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 36331791 - 36331738
Alignment:
Q  22 attattatatgcaggggtaggattt-gaacctcggacaccccacttattcactt 74  Q
    |||||||||||||||||| ||  || ||||| ||||||||||||||||||||||    
T  36331791 attattatatgcaggggtcggggttcgaaccccggacaccccacttattcactt 36331738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 38555105 - 38555040
Alignment:
Q  10 gcagagaca-tgtattattatatgcaggggtaggatttgaacctcggacaccccacttattcactt 74  Q
    ||||||||| || |||||||||||||||||| || || |||||||  ||||| |||||||||||||    
T  38555105 gcagagacaatgcattattatatgcaggggtcgggttcgaacctcaaacacctcacttattcactt 38555040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 49146114 - 49146167
Alignment:
Q  22 attattatatgcaggggtaggattt-gaacctcggacaccccacttattcactt 74  Q
    |||||||||||||||||| ||  || ||||| ||||||||||||||||||||||    
T  49146114 attattatatgcaggggtcggggttcgaaccccggacaccccacttattcactt 49146167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 55318040 - 55318100
Alignment:
Q  15 gacatgtattattatatgcaggggtagg-atttgaacctcggacaccccacttattcactt 74  Q
    |||||||||| ||| ||| |||||| || ||| ||||| ||||||||||||||||||||||    
T  55318040 gacatgtattgttaaatgtaggggttgggattcgaaccccggacaccccacttattcactt 55318100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 23799318 - 23799379
Alignment:
Q  10 gcagagacatgtattattatatgcaggggtagg-atttgaacctcggacaccccacttattc 70  Q
    ||||||||||| ||| |||||||||||||| || ||| ||||||||||||||||||||||||    
T  23799318 gcagagacatgcattgttatatgcaggggtcgggattcgaacctcggacaccccacttattc 23799379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 35498416 - 35498480
Alignment:
Q  10 gcagagacatgtattattatatgcaggggtaggatttgaacctcggacaccccacttattcactt 74  Q
    |||| |||||| |||||||||||||||||| || ||  ||| |||||||||||||||||||||||    
T  35498416 gcagggacatgcattattatatgcaggggttgggttcaaacttcggacaccccacttattcactt 35498480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 37449575 - 37449522
Alignment:
Q  22 attattatatgcaggggtagga-tttgaacctcggacaccccacttattcactt 74  Q
    |||||||||||||||||| ||| ||||||||| ||||| |||||||||||||||    
T  37449575 attattatatgcaggggtcggagtttgaaccttggacatcccacttattcactt 37449522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 32814850 - 32814907
Alignment:
Q  15 gacatgtattattatatgcaggggtagga-tttgaacctcggacaccccacttattca 71  Q
    |||||| |||||||||||||||||| ||| || ||| | |||||||||||||||||||    
T  32814850 gacatgcattattatatgcaggggtcggagttcgaatcccggacaccccacttattca 32814907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 14102486 - 14102542
Alignment:
Q  17 catgtattattatatgcaggggtagga-tttgaacctcggacaccccacttattcac 72  Q
    |||| |||||||||||||||||  ||  |||||||| ||||||||||||||||||||    
T  14102486 catgcattattatatgcaggggccggggtttgaaccccggacaccccacttattcac 14102542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 14412503 - 14412559
Alignment:
Q  17 catgtattattatatgcaggggtagga-tttgaacctcggacaccccacttattcac 72  Q
    |||| |||||||||||||||||  ||  |||||||| ||||||||||||||||||||    
T  14412503 catgcattattatatgcaggggccggggtttgaaccccggacaccccacttattcac 14412559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 21507270 - 21507213
Alignment:
Q  18 atgtattattatatgcaggggtagga-tttgaacctcggacaccccacttattcactt 74  Q
    |||||||||||||||||||||| ||| |||||||  ||||||||||||||||||||||    
T  21507270 atgtattattatatgcaggggtcggagtttgaactccggacaccccacttattcactt 21507213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 5694949 - 5694992
Alignment:
Q  24 tattatatgcaggggtagga-tttgaacctcggacaccccactt 66  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  5694949 tattatatgcaggggtaggagtttgaacctcggacaccccactt 5694992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 6143995 - 6144047
Alignment:
Q  22 attattatatgcaggggtaggatttgaacctcggacaccccacttattcactt 74  Q
    ||||||||||| |||||| || || ||||| ||||||||||||||||||||||    
T  6143995 attattatatgtaggggtcgggttcgaaccccggacaccccacttattcactt 6144047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 11982792 - 11982836
Alignment:
Q  22 attattatatgcaggggtaggatttgaacctcggacaccccactt 66  Q
    |||||||||||||||||| || |||||||| ||||||||||||||    
T  11982792 attattatatgcaggggtcgggtttgaaccccggacaccccactt 11982836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 7233999 - 7234046
Alignment:
Q  26 ttatatgcagggg-taggatttgaacctcggacaccccacttattcac 72  Q
    ||||||||||||| | || |||||||||||||||||||||||||||||    
T  7233999 ttatatgcaggggctggggtttgaacctcggacaccccacttattcac 7234046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 19279479 - 19279530
Alignment:
Q  22 attattatatgcaggggtaggattt-gaacctcggacaccccacttattcac 72  Q
    |||||||||||||||||  ||| || ||||||||||||||||||||||||||    
T  19279479 attattatatgcaggggccggagttcgaacctcggacaccccacttattcac 19279530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 34571408 - 34571456
Alignment:
Q  22 attattatatgcaggggt-aggatttgaacctcggacaccccacttattc 70  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  34571408 attattatatgcaggggtccggatttgaacc-cggacaccccacttattc 34571456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 6219372 - 6219432
Alignment:
Q  10 gcagagacatgtattattatatgcaggggtaggatttgaacctcggacaccccacttattc 70  Q
    |||| |||||| |||||||||| ||| ||| ||||| ||||| | ||||||||||||||||    
T  6219372 gcagggacatgcattattatatacagtggtcggattcgaaccccagacaccccacttattc 6219432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000006; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 36386174 - 36386126
Alignment:
Q  26 ttatatgcaggggtaggatttgaacctcggacaccccacttattcactt 74  Q
    |||||||||||||| || |||||| ||||||||||||||||||||||||    
T  36386174 ttatatgcaggggtcgggtttgaatctcggacaccccacttattcactt 36386126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 17239931 - 17239981
Alignment:
Q  22 attattatatgcaggggtagg-atttgaacctcggacaccccacttattca 71  Q
    |||||||||||||||||| || ||| |||||||||||||||||||||||||    
T  17239931 attattatatgcaggggtcgggattcgaacctcggacaccccacttattca 17239981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 25731964 - 25732014
Alignment:
Q  22 attattatatgcaggggtaggattt-gaacctcggacaccccacttattca 71  Q
    |||||||||||||||||| ||| || |||||||||||||||||||||||||    
T  25731964 attattatatgcaggggtcggagttcgaacctcggacaccccacttattca 25732014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 4529839 - 4529775
Alignment:
Q  11 cagagacatgtattattatatgcaggggtagga-tttgaacctcggacaccccacttattcactt 74  Q
    |||||||||| |||||||||||||||||| ||| || ||||  || |||||||||||||||||||    
T  4529839 cagagacatgcattattatatgcaggggtcggagttcgaactccgaacaccccacttattcactt 4529775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 16973938 - 16973986
Alignment:
Q  22 attattatatgcaggggt-aggatttgaacctcggacaccccacttatt 69  Q
    |||||||||||||||||| |||||| ||||| |||||||||||||||||    
T  16973938 attattatatgcaggggttaggattcgaaccccggacaccccacttatt 16973986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 19052676 - 19052626
Alignment:
Q  22 attattatatgcaggggt-aggatttgaacctcggacaccccacttattca 71  Q
    |||||||||||||||||| |||||| ||||| |||||| ||||||||||||    
T  19052676 attattatatgcaggggtcaggattcgaaccccggacatcccacttattca 19052626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 32891311 - 32891361
Alignment:
Q  22 attattatatgcaggggtaggattt-gaacctcggacaccccacttattca 71  Q
    |||||||||||||||||| || ||| ||||| |||||||||||||||||||    
T  32891311 attattatatgcaggggtcggttttcgaaccccggacaccccacttattca 32891361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 5207128 - 5207173
Alignment:
Q  27 tatatgcaggggtaggatttgaacctcggacaccccacttattcac 72  Q
    ||||||||||||| ||||| ||||| | ||||||||||||||||||    
T  5207128 tatatgcaggggtcggattcgaaccccagacaccccacttattcac 5207173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 6498895 - 6498928
Alignment:
Q  41 ggatttgaacctcggacaccccacttattcactt 74  Q
    ||||| ||||||||||||||||||||||||||||    
T  6498895 ggattcgaacctcggacaccccacttattcactt 6498928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 37123208 - 37123269
Alignment:
Q  14 agacatgtattattatatgcaggggtag-gatttgaacctcggacaccccacttattcactt 74  Q
    ||||||| |||||||||||||||||| | |||| ||||  ||||||||| ||||||||||||    
T  37123208 agacatgcattattatatgcaggggtcgagattcgaactccggacaccctacttattcactt 37123269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 44422137 - 44422190
Alignment:
Q  22 attattatatgcaggggtaggattt-gaacctcggacaccccacttattcactt 74  Q
    |||||||||||||||| | ||| || ||||| ||||||||||||||||||||||    
T  44422137 attattatatgcagggatcggagttcgaaccccggacaccccacttattcactt 44422190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 19352885 - 19352945
Alignment:
Q  11 cagagacatgtattattatatgcaggggt-aggatttgaacctcggacaccccacttattc 70  Q
    |||||||||| ||| |||||||||| ||| |||||||||||| ||||||| ||||| ||||    
T  19352885 cagagacatgcattgttatatgcagaggtcaggatttgaaccccggacacgccactcattc 19352945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 32885718 - 32885769
Alignment:
Q  22 attattatatgcaggggtaggattt-gaacctcggacaccccacttattcac 72  Q
    |||||||||||||||||| ||| || ||||||||||||||||||||||||||    
T  32885718 attattatatgcaggggtcggagttcgaacctcggacaccccacttattcac 32885769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 44272959 - 44273017
Alignment:
Q  15 gacatgtattattatatgcaggggtaggattt-gaacctcggacaccccacttattcac 72  Q
    |||||| |||||||||||||||||| ||| || |||||||||| |||||||||||||||    
T  44272959 gacatgcattattatatgcaggggtcggagttcgaacctcggataccccacttattcac 44273017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 31601832 - 31601887
Alignment:
Q  18 atgtattattatatgcaggggtag-gatttgaacctcggacaccccacttattcac 72  Q
    |||||||||||||||||||||  | |||| ||||| ||||||||||||||||||||    
T  31601832 atgtattattatatgcaggggccgagattcgaaccccggacaccccacttattcac 31601887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 37032244 - 37032193
Alignment:
Q  22 attattatatgcaggggtagg-atttgaacctcggacaccccacttattcac 72  Q
    |||||||||||||||||| || ||| ||||| ||||||||||||||||||||    
T  37032244 attattatatgcaggggtcgggattcgaaccccggacaccccacttattcac 37032193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 43115294 - 43115349
Alignment:
Q  18 atgtattattatatgcaggggtag-gatttgaacctcggacaccccacttattcac 72  Q
    |||||||||||||||||||||| | |||| ||||| ||||||||||| ||||||||    
T  43115294 atgtattattatatgcaggggtcgagattcgaaccccggacaccccatttattcac 43115349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 9084793 - 9084839
Alignment:
Q  26 ttatatgcaggggtagg-atttgaacctcggacaccccacttattca 71  Q
    |||||||||||||| || ||| |||||||||||||||||||||||||    
T  9084793 ttatatgcaggggtcgggattcgaacctcggacaccccacttattca 9084839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 46903366 - 46903408
Alignment:
Q  24 tattatatgcaggggtaggatttgaacctcggacaccccactt 66  Q
    |||||||||||||||| || |||||||| ||||||||||||||    
T  46903366 tattatatgcaggggttgggtttgaaccccggacaccccactt 46903408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 8690244 - 8690297
Alignment:
Q  22 attattatatgcaggggtaggattt-gaacctcggacaccccacttattcactt 74  Q
    |||||||||||||||||| ||  || ||||| ||||||||||||||||||||||    
T  8690244 attattatatgcaggggtcggggttcgaaccccggacaccccacttattcactt 8690297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 26253978 - 26254035
Alignment:
Q  18 atgtattattatatgcaggggtagga-tttgaacctcggacaccccacttattcactt 74  Q
    |||||||||||||||||||||| ||| || ||| | ||||||| ||||||||||||||    
T  26253978 atgtattattatatgcaggggtcggagttcgaatcccggacactccacttattcactt 26254035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 32325415 - 32325358
Alignment:
Q  15 gacatgtattattatatgcaggggtaggatttgaacctcggacaccccacttattcac 72  Q
    |||||||||||||||||| || | | || |||||||||||||||||| | ||||||||    
T  32325415 gacatgtattattatatgtagagatcgggtttgaacctcggacacccaatttattcac 32325358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 42758235 - 42758178
Alignment:
Q  15 gacatgtattattatatgcaggggtaggatttgaacctcggacaccccacttattcac 72  Q
    |||||| |||||||||||||||||  || || |||||  |||||||||||||||||||    
T  42758235 gacatgcattattatatgcaggggccgggttcgaaccctggacaccccacttattcac 42758178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 47416498 - 47416551
Alignment:
Q  22 attattatatgcaggggtaggattt-gaacctcggacaccccacttattcactt 74  Q
    |||||||||||||||||| ||  || ||| ||||||||||||||||||||||||    
T  47416498 attattatatgcaggggttggggttcgaatctcggacaccccacttattcactt 47416551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 48501727 - 48501670
Alignment:
Q  18 atgtattattatatgcagggg-taggatttgaacctcggacaccccacttattcactt 74  Q
    ||||||||||||||||||||| | || || |||| ||| |||||||||||||||||||    
T  48501727 atgtattattatatgcaggggctggggttcgaacatcgaacaccccacttattcactt 48501670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 26708616 - 26708564
Alignment:
Q  22 attattatatgcaggggtaggatttgaacctcggacaccccacttattcactt 74  Q
    |||||||||||||||||| || || ||||||| |||||| ||| |||||||||    
T  26708616 attattatatgcaggggttgggttcgaacctcagacacctcacctattcactt 26708564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 53815726 - 53815778
Alignment:
Q  22 attattatatgcagggg-taggatttgaacctcggacaccccacttattcact 73  Q
    ||||||||||||||||| | || || ||||| |||||||||||||||||||||    
T  53815726 attattatatgcaggggctggggttcgaaccccggacaccccacttattcact 53815778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 22600000 - 22599950
Alignment:
Q  22 attattatatgcaggggtaggatttgaacctcggacaccccacttattcac 72  Q
    |||||||||||||||| | ||||||||||| | ||||||||||||||||||    
T  22600000 attattatatgcagggttgggatttgaaccccagacaccccacttattcac 22599950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 18102024 - 18101963
Alignment:
Q  12 agagacatgtattattatatgcaggggtagga-tttgaacctcggacaccccacttattcac 72  Q
    |||||||||||||||||||||||||||  ||| || ||||| | ||||||||||||||||||    
T  18102024 agagacatgtattattatatgcaggggccggagttcgaaccccagacaccccacttattcac 18101963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 31556834 - 31556899
Alignment:
Q  8 tagcagagacatgtattattatatgcaggggtaggattt-gaacctcggacaccccacttattcac 72  Q
    |||||| |||||| ||| |||||||||||||| ||| || ||||| ||||||||||||||||||||    
T  31556834 tagcagggacatgcattgttatatgcaggggtcggagttcgaaccccggacaccccacttattcac 31556899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 2029197 - 2029142
Alignment:
Q  18 atgtattattatatgcaggggt-aggatttgaacctcggacaccccacttattcac 72  Q
    ||||||||||||||||||||||  ||||| ||||| || |||||||||||||||||    
T  2029197 atgtattattatatgcaggggtcgggattcgaaccccgaacaccccacttattcac 2029142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 4674880 - 4674827
Alignment:
Q  22 attattatatgcaggggtaggattt-gaacctcggacaccccacttattcactt 74  Q
    |||||||||||||||||| ||  || ||||| ||||||||||||||||||||||    
T  4674880 attattatatgcaggggtcggggttcgaaccccggacaccccacttattcactt 4674827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 6447545 - 6447492
Alignment:
Q  22 attattatatgcaggggtaggattt-gaacctcggacaccccacttattcactt 74  Q
    |||||||||||||||||  ||  || ||||||||||||||||||||||||||||    
T  6447545 attattatatgcaggggccggggttcgaacctcggacaccccacttattcactt 6447492  T

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Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 36045199 - 36045146
Alignment:
Q  22 attattatatgcaggggtaggattt-gaacctcggacaccccacttattcactt 74  Q
    |||||||||||||||||| ||  || ||||| ||||||||||||||||||||||    
T  36045199 attattatatgcaggggtcggggttcgaaccccggacaccccacttattcactt 36045146  T

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Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 37303960 - 37304017
Alignment:
Q  18 atgtattattatatgcaggggt-aggatttgaacctcggacaccccacttattcactt 74  Q
    ||||||||||||||||||||||  || || |||||  |||||||||||||||||||||    
T  37303960 atgtattattatatgcaggggtcggggttcgaaccctggacaccccacttattcactt 37304017  T

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Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 37986942 - 37986881
Alignment:
Q  12 agagacatgtattattatatgcaggggtagga-tttgaacctcggacaccccacttattcac 72  Q
    ||||| ||| |||||||||||||| ||| ||| |||||||| |||||| |||||||||||||    
T  37986942 agagatatgcattattatatgcagaggtcggagtttgaaccccggacatcccacttattcac 37986881  T

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Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 38230265 - 38230217
Alignment:
Q  26 ttatatgcaggggtaggatttgaacctcggacaccccacttattcactt 74  Q
    |||||||||||||| || |||||| | |||||||| |||||||||||||    
T  38230265 ttatatgcaggggtcgggtttgaatcccggacacctcacttattcactt 38230217  T

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Target: chr8 (Bit Score: 34; Significance: 0.0000000004; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 10292382 - 10292435
Alignment:
Q  22 attattatatgcaggggtag-gatttgaacctcggacaccccacttattcactt 74  Q
    |||||||||||||||||  | |||| ||||||||||||||||||||||||||||    
T  10292382 attattatatgcaggggctgagattcgaacctcggacaccccacttattcactt 10292435  T

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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 17467308 - 17467358
Alignment:
Q  22 attattatatgcaggggtaggatttgaacctcggacaccccacttattcac 72  Q
    |||||||||||||||||  || || ||||| ||||||||||||||||||||    
T  17467308 attattatatgcaggggccgggttcgaaccccggacaccccacttattcac 17467358  T

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Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 1588797 - 1588850
Alignment:
Q  22 attattatatgcaggggtaggattt-gaacctcggacaccccacttattcactt 74  Q
    |||||||||||||||||  ||  || ||||||||||||||||||||||||||||    
T  1588797 attattatatgcaggggccggggttcgaacctcggacaccccacttattcactt 1588850  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 29937233 - 29937289
Alignment:
Q  15 gacatgtattattatatgcaggggtagga-tttgaacctcggacaccccacttattc 70  Q
    |||||||||| |||||||||||||  ||| || ||||||| ||||||||||||||||    
T  29937233 gacatgtattgttatatgcaggggccggagttcgaacctcagacaccccacttattc 29937289  T

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Target: scaffold0126 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 22917 - 22864
Alignment:
Q  19 tgtattattatatgcaggggtaggatttgaacctcggacaccccacttattcac 72  Q
    ||||||||||||||||||||  || || |||||  |||||||||||||||||||    
T  22917 tgtattattatatgcaggggccgggttcgaaccctggacaccccacttattcac 22864  T

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Target: scaffold0070 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 12595 - 12648
Alignment:
Q  22 attattatatgcaggggt-aggatttgaacctcggacaccccacttattcactt 74  Q
    |||||||||||||||||| ||| || |||||||||| |||||| ||||||||||    
T  12595 attattatatgcaggggtcagggttcgaacctcggataccccatttattcactt 12648  T

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Target: scaffold0809 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 4870 - 4818
Alignment:
Q  22 attattatatgcaggggtaggatttgaacctcggacaccccacttattcactt 74  Q
    |||||||||||||||||  || || ||| | ||||||||||||||||||||||    
T  4870 attattatatgcaggggcggggttcgaatcccggacaccccacttattcactt 4818  T

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Target: scaffold0712 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 4538 - 4598
Alignment:
Q  10 gcagagacatgtattattatatgcaggggt-aggatttgaacctcggacaccccacttatt 69  Q
    |||| |||||| ||| |||||||||||||| || |||||||| ||||| ||||||||||||    
T  4538 gcagggacatgcattgttatatgcaggggtcagaatttgaacttcggataccccacttatt 4598  T

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Target: scaffold0709 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 4558 - 4618
Alignment:
Q  10 gcagagacatgtattattatatgcaggggt-aggatttgaacctcggacaccccacttatt 69  Q
    |||| |||||| ||| |||||||||||||| || |||||||| ||||| ||||||||||||    
T  4558 gcagggacatgcattgttatatgcaggggtcagaatttgaacttcggataccccacttatt 4618  T

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