View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7461_low_35 (Length: 235)
Name: NF7461_low_35
Description: NF7461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7461_low_35 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 1702563 - 1702766
Alignment:
| Q |
32 |
cactaacaagcactttccttctcatcatcctcttattattcaacaccttagccatcctattattccttcaccttctcctcaaaattcaaactcatcactt |
131 |
Q |
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| T |
1702563 |
cactagcaaacactttccttctcatcatcctcttattattcaacaccttaaccatcctattattcctccaccttctcctcaaaattcaaactcatcactt |
1702662 |
T |
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| Q |
132 |
atccctacacttcttatctccctcactacacgtactccaactttatctcctcaaatttctcaagttcccactaactcttccacgagatcacttactggaa |
231 |
Q |
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|||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1702663 |
atccctacacctcttatctcccccactacacgtactccaactttatctcctcaaatttctcaagttcccactaactcttccacgagatcacttactggaa |
1702762 |
T |
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| Q |
232 |
ctgc |
235 |
Q |
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|||| |
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| T |
1702763 |
ctgc |
1702766 |
T |
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