View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7461_low_36 (Length: 234)
Name: NF7461_low_36
Description: NF7461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7461_low_36 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 92 - 234
Target Start/End: Original strand, 5689624 - 5689770
Alignment:
| Q |
92 |
ttatggtccaaaa-caatgatgacaaccataaggtacttttgcatcannnnnnnnccttgtcatattcaaacaactactcattccaagcattatgcaaaa |
190 |
Q |
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| T |
5689624 |
ttatggtccaaattcaatgatgacaaccacatggtacttttgcatcattttttttccttgtcatattcaaacaactactcataccaagcattatgcaaaa |
5689723 |
T |
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| Q |
191 |
agaaaaatctccattacaaaatc---catcaaaccacttattatttc |
234 |
Q |
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| T |
5689724 |
agaaaaatctccattacaaaatcaatcatcaaaccacttattatttc |
5689770 |
T |
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