View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7462_low_7 (Length: 323)

Name: NF7462_low_7
Description: NF7462
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7462_low_7
NF7462_low_7
[»] chr3 (63 HSPs)
chr3 (136-220)||(40202420-40202502)
chr3 (246-294)||(9174486-9174534)
chr3 (186-249)||(331883-331945)
chr3 (186-238)||(52866418-52866472)
chr3 (186-240)||(40639794-40639847)
chr3 (131-180)||(10872759-10872808)
chr3 (131-180)||(12744905-12744954)
chr3 (132-176)||(34903675-34903719)
chr3 (186-249)||(9170105-9170167)
chr3 (186-249)||(41253924-41253986)
chr3 (186-240)||(7823952-7824005)
chr3 (186-240)||(7829128-7829181)
chr3 (186-240)||(7882283-7882336)
chr3 (138-180)||(20619002-20619044)
chr3 (186-240)||(24075449-24075502)
chr3 (186-240)||(34327593-34327646)
chr3 (131-173)||(40639803-40639845)
chr3 (186-248)||(40639880-40639941)
chr3 (134-180)||(45736774-45736820)
chr3 (186-240)||(48191717-48191770)
chr3 (186-235)||(12744986-12745034)
chr3 (186-235)||(22496958-22497006)
chr3 (131-180)||(38677569-38677618)
chr3 (131-176)||(52215884-52215929)
chr3 (186-235)||(54595797-54595845)
chr3 (186-254)||(12109918-12109986)
chr3 (186-250)||(24694220-24694283)
chr3 (132-180)||(41743677-41743725)
chr3 (129-180)||(336068-336119)
chr3 (128-175)||(24596892-24596939)
chr3 (133-180)||(29389333-29389380)
chr3 (133-180)||(42681186-42681233)
chr3 (131-173)||(331892-331934)
chr3 (138-176)||(7591996-7592034)
chr3 (186-236)||(7823873-7823922)
chr3 (186-240)||(7826808-7826861)
chr3 (131-173)||(8504854-8504896)
chr3 (186-240)||(21217168-21217221)
chr3 (131-173)||(21217170-21217212)
chr3 (186-220)||(23444358-23444392)
chr3 (189-235)||(37897770-37897815)
chr3 (186-240)||(52215965-52216018)
chr3 (131-172)||(9170116-9170157)
chr3 (186-235)||(10872679-10872727)
chr3 (129-162)||(12745006-12745039)
chr3 (131-176)||(24075536-24075581)
chr3 (186-235)||(24722694-24722742)
chr3 (186-235)||(30519683-30519731)
chr3 (213-242)||(34365153-34365182)
chr3 (186-247)||(36344458-36344519)
chr3 (132-173)||(37897776-37897817)
chr3 (131-180)||(42929010-42929059)
chr3 (193-240)||(42930109-42930153)
chr3 (135-180)||(43177096-43177141)
chr3 (131-180)||(47334646-47334695)
chr3 (138-179)||(51060674-51060715)
chr3 (140-180)||(3074865-3074905)
chr3 (131-171)||(7882285-7882325)
chr3 (133-181)||(10841703-10841751)
chr3 (129-180)||(13900230-13900282)
chr3 (131-179)||(22497039-22497087)
chr3 (189-221)||(23444278-23444310)
chr3 (132-180)||(26104779-26104827)
[»] chr1 (40 HSPs)
chr1 (134-250)||(46412695-46412821)
chr1 (186-240)||(3013695-3013748)
chr1 (131-180)||(45010842-45010891)
chr1 (131-180)||(49586093-49586142)
chr1 (132-176)||(18789842-18789886)
chr1 (129-173)||(43738607-43738651)
chr1 (186-236)||(14967310-14967359)
chr1 (186-240)||(23398421-23398474)
chr1 (186-240)||(24981926-24981979)
chr1 (134-180)||(34953983-34954029)
chr1 (185-235)||(43738612-43738661)
chr1 (131-180)||(6758550-6758599)
chr1 (131-180)||(8338679-8338728)
chr1 (131-180)||(33939384-33939433)
chr1 (186-235)||(39420325-39420373)
chr1 (131-180)||(42761457-42761506)
chr1 (131-180)||(45115257-45115306)
chr1 (136-180)||(3549788-3549832)
chr1 (189-237)||(3549867-3549914)
chr1 (188-255)||(1602804-1602871)
chr1 (131-249)||(14214554-14214676)
chr1 (128-179)||(18607173-18607224)
chr1 (131-173)||(3013704-3013746)
chr1 (134-180)||(6508404-6508450)
chr1 (186-240)||(10256783-10256836)
chr1 (186-240)||(50308713-50308766)
chr1 (186-240)||(50550204-50550257)
chr1 (132-181)||(3013615-3013664)
chr1 (131-180)||(5431345-5431394)
chr1 (131-180)||(10832081-10832130)
chr1 (131-180)||(15351719-15351768)
chr1 (186-235)||(24981848-24981896)
chr1 (186-231)||(34491209-34491253)
chr1 (186-235)||(34953903-34953951)
chr1 (131-180)||(39216107-39216156)
chr1 (186-235)||(48083511-48083559)
chr1 (191-235)||(5595427-5595471)
chr1 (186-242)||(6156634-6156689)
chr1 (137-177)||(9101074-9101114)
chr1 (132-180)||(13043427-13043475)
[»] chr8 (37 HSPs)
chr8 (186-240)||(27502903-27502956)
chr8 (131-180)||(10117057-10117106)
chr8 (131-180)||(13496522-13496571)
chr8 (131-179)||(13290039-13290087)
chr8 (129-240)||(10679134-10679251)
chr8 (129-180)||(13841850-13841901)
chr8 (132-176)||(28939422-28939466)
chr8 (186-249)||(11295657-11295719)
chr8 (134-180)||(3444629-3444675)
chr8 (186-240)||(10934688-10934741)
chr8 (186-235)||(5888343-5888391)
chr8 (131-180)||(7258672-7258721)
chr8 (132-180)||(4613646-4613694)
chr8 (132-180)||(13964424-13964472)
chr8 (132-176)||(18078008-18078052)
chr8 (134-173)||(27502908-27502947)
chr8 (185-236)||(36648652-36648702)
chr8 (185-240)||(44319523-44319577)
chr8 (186-240)||(2296476-2296529)
chr8 (186-248)||(3444616-3444677)
chr8 (132-178)||(10815450-10815496)
chr8 (186-220)||(11295749-11295783)
chr8 (186-240)||(13496520-13496573)
chr8 (131-180)||(1662664-1662713)
chr8 (131-180)||(1739652-1739701)
chr8 (186-231)||(7484702-7484746)
chr8 (185-233)||(13290119-13290168)
chr8 (186-235)||(13964426-13964474)
chr8 (131-180)||(27518402-27518451)
chr8 (131-180)||(33070252-33070301)
chr8 (186-235)||(41753765-41753813)
chr8 (185-233)||(3385484-3385531)
chr8 (131-179)||(11335655-11335703)
chr8 (136-180)||(24017727-24017771)
chr8 (186-250)||(24287777-24287840)
chr8 (132-180)||(34326332-34326380)
chr8 (132-176)||(44525101-44525145)
[»] chr4 (54 HSPs)
chr4 (186-240)||(53176310-53176363)
chr4 (131-180)||(6975020-6975069)
chr4 (131-180)||(54713102-54713151)
chr4 (132-176)||(54532844-54532888)
chr4 (133-180)||(4406328-4406375)
chr4 (129-180)||(12168636-12168687)
chr4 (186-240)||(23568465-23568518)
chr4 (131-173)||(47181563-47181605)
chr4 (186-235)||(24798212-24798260)
chr4 (131-180)||(49481884-49481933)
chr4 (186-235)||(52914083-52914131)
chr4 (186-251)||(54713089-54713153)
chr4 (132-180)||(3669561-3669609)
chr4 (134-209)||(26636495-26636573)
chr4 (131-171)||(38381980-38382020)
chr4 (133-181)||(53176394-53176442)
chr4 (134-181)||(18881430-18881477)
chr4 (186-249)||(21224770-21224833)
chr4 (186-237)||(22493661-22493711)
chr4 (136-179)||(38716396-38716439)
chr4 (195-246)||(40814664-40814715)
chr4 (185-220)||(40814753-40814788)
chr4 (185-240)||(40952350-40952404)
chr4 (129-180)||(47308116-47308167)
chr4 (134-180)||(3511716-3511762)
chr4 (138-180)||(7740577-7740619)
chr4 (186-240)||(14450959-14451012)
chr4 (134-180)||(14450964-14451010)
chr4 (190-240)||(19878149-19878198)
chr4 (190-236)||(19878292-19878337)
chr4 (186-240)||(25022520-25022573)
chr4 (186-240)||(34616300-34616353)
chr4 (186-240)||(38381978-38382031)
chr4 (134-180)||(38539485-38539531)
chr4 (185-231)||(41856293-41856339)
chr4 (186-240)||(47181561-47181614)
chr4 (186-220)||(54931904-54931938)
chr4 (186-240)||(55934642-55934695)
chr4 (129-178)||(10308237-10308286)
chr4 (138-179)||(12672458-12672499)
chr4 (131-180)||(20215571-20215620)
chr4 (132-173)||(24798221-24798262)
chr4 (132-173)||(27537061-27537102)
chr4 (186-231)||(27537067-27537111)
chr4 (132-181)||(33124104-33124153)
chr4 (131-176)||(36072574-36072619)
chr4 (131-180)||(52281122-52281171)
chr4 (186-235)||(55936072-55936120)
chr4 (186-238)||(12912613-12912664)
chr4 (131-179)||(13689624-13689672)
chr4 (132-180)||(16578596-16578644)
chr4 (131-175)||(33036956-33037000)
chr4 (138-178)||(40952437-40952477)
chr4 (186-238)||(47308118-47308169)
[»] chr7 (46 HSPs)
chr7 (186-240)||(10095721-10095774)
chr7 (186-240)||(47535055-47535109)
chr7 (186-251)||(25245228-25245292)
chr7 (131-180)||(31813415-31813464)
chr7 (189-249)||(3882639-3882699)
chr7 (132-180)||(24280908-24280956)
chr7 (186-257)||(41404000-41404070)
chr7 (186-240)||(5950279-5950332)
chr7 (186-240)||(6455551-6455604)
chr7 (134-180)||(6455556-6455602)
chr7 (135-181)||(27242632-27242678)
chr7 (186-240)||(43103074-43103127)
chr7 (133-179)||(45002082-45002128)
chr7 (186-235)||(2943219-2943267)
chr7 (131-180)||(21886471-21886520)
chr7 (186-235)||(23818431-23818479)
chr7 (185-249)||(785636-785699)
chr7 (131-179)||(2943300-2943348)
chr7 (129-173)||(8447811-8447855)
chr7 (131-171)||(43103076-43103116)
chr7 (129-180)||(8282441-8282492)
chr7 (129-180)||(28306317-28306368)
chr7 (195-249)||(2943306-2943359)
chr7 (134-180)||(6847283-6847329)
chr7 (186-240)||(7295141-7295194)
chr7 (186-240)||(7701190-7701243)
chr7 (131-173)||(7701192-7701234)
chr7 (131-173)||(10095723-10095765)
chr7 (131-180)||(25245141-25245191)
chr7 (189-243)||(28321563-28321616)
chr7 (134-180)||(30138875-30138921)
chr7 (186-240)||(39012978-39013031)
chr7 (186-240)||(46022633-46022686)
chr7 (186-247)||(6847271-6847331)
chr7 (131-180)||(9555264-9555313)
chr7 (131-180)||(23797435-23797484)
chr7 (195-240)||(25245139-25245184)
chr7 (186-235)||(31115616-31115664)
chr7 (131-179)||(38815142-38815188)
chr7 (131-180)||(41872138-41872187)
chr7 (131-180)||(43813129-43813178)
chr7 (129-173)||(2943214-2943258)
chr7 (129-173)||(23797350-23797394)
chr7 (129-173)||(25768713-25768757)
chr7 (185-233)||(28752163-28752210)
chr7 (131-175)||(38940224-38940268)
[»] chr6 (35 HSPs)
chr6 (185-239)||(12218448-12218501)
chr6 (186-240)||(26527275-26527328)
chr6 (131-180)||(11637174-11637223)
chr6 (129-180)||(13506836-13506887)
chr6 (185-235)||(18886315-18886364)
chr6 (186-240)||(32254906-32254959)
chr6 (131-180)||(8449663-8449712)
chr6 (131-180)||(8458467-8458516)
chr6 (186-247)||(12104740-12104800)
chr6 (131-180)||(13281538-13281587)
chr6 (131-180)||(31398313-31398362)
chr6 (186-235)||(34379820-34379868)
chr6 (186-249)||(8146034-8146096)
chr6 (186-233)||(11745932-11745979)
chr6 (129-172)||(12383591-12383634)
chr6 (137-179)||(3199806-3199848)
chr6 (186-240)||(6560742-6560795)
chr6 (186-240)||(29072153-29072206)
chr6 (186-240)||(29104726-29104779)
chr6 (134-180)||(29418941-29418987)
chr6 (134-180)||(30916961-30917007)
chr6 (133-179)||(31536402-31536448)
chr6 (131-180)||(6560744-6560793)
chr6 (131-180)||(6894818-6894867)
chr6 (131-180)||(8146036-8146085)
chr6 (131-180)||(12383676-12383725)
chr6 (134-179)||(12383875-12383920)
chr6 (131-180)||(18097064-18097113)
chr6 (195-240)||(30916956-30917000)
chr6 (186-235)||(34170085-34170133)
chr6 (132-180)||(11746315-11746363)
chr6 (131-171)||(12104749-12104789)
chr6 (186-249)||(14031663-14031724)
chr6 (132-180)||(28555034-28555082)
chr6 (131-179)||(33689233-33689281)
[»] chr2 (52 HSPs)
chr2 (186-235)||(11726580-11726628)
chr2 (186-235)||(15119784-15119832)
chr2 (131-180)||(32143493-32143542)
chr2 (131-180)||(41805278-41805327)
chr2 (132-176)||(19210823-19210867)
chr2 (185-240)||(7079372-7079426)
chr2 (186-240)||(37182901-37182954)
chr2 (190-240)||(42530581-42530630)
chr2 (186-235)||(1961394-1961442)
chr2 (131-180)||(26234111-26234160)
chr2 (131-180)||(27331846-27331895)
chr2 (186-235)||(31024178-31024226)
chr2 (133-178)||(38618484-38618529)
chr2 (185-233)||(13304546-13304594)
chr2 (129-173)||(15119779-15119823)
chr2 (131-171)||(32143410-32143450)
chr2 (128-180)||(32630407-32630459)
chr2 (131-179)||(42530496-42530544)
chr2 (131-178)||(3121511-3121558)
chr2 (133-180)||(8740525-8740572)
chr2 (186-240)||(13994275-13994327)
chr2 (186-249)||(21183412-21183474)
chr2 (133-180)||(26003522-26003569)
chr2 (134-173)||(37182910-37182949)
chr2 (133-180)||(38465876-38465923)
chr2 (129-180)||(45472412-45472463)
chr2 (186-240)||(3098211-3098264)
chr2 (131-173)||(3098220-3098262)
chr2 (186-240)||(8510590-8510643)
chr2 (131-173)||(8510599-8510641)
chr2 (138-180)||(10996257-10996299)
chr2 (186-240)||(25270941-25270994)
chr2 (131-173)||(25270950-25270992)
chr2 (186-240)||(38465791-38465844)
chr2 (131-173)||(41056982-41057024)
chr2 (131-173)||(42530586-42530628)
chr2 (138-180)||(43732149-43732191)
chr2 (131-180)||(10602381-10602430)
chr2 (186-235)||(13882768-13882816)
chr2 (186-235)||(14022893-14022941)
chr2 (131-180)||(15119864-15119913)
chr2 (189-250)||(15859543-15859603)
chr2 (133-162)||(32460747-32460776)
chr2 (131-180)||(38181847-38181896)
chr2 (186-235)||(41056973-41057021)
chr2 (134-162)||(1961316-1961344)
chr2 (133-173)||(11726589-11726629)
chr2 (186-242)||(13333532-13333587)
chr2 (131-171)||(13333543-13333583)
chr2 (131-175)||(15446783-15446827)
chr2 (132-180)||(15859638-15859686)
chr2 (127-179)||(38581003-38581055)
[»] chr5 (36 HSPs)
chr5 (132-176)||(33684134-33684178)
chr5 (186-241)||(4297282-4297336)
chr5 (132-179)||(28518723-28518770)
chr5 (186-236)||(3100411-3100460)
chr5 (131-180)||(71263-71312)
chr5 (127-180)||(3100492-3100545)
chr5 (131-180)||(13654595-13654644)
chr5 (131-180)||(26045269-26045318)
chr5 (131-180)||(26141759-26141808)
chr5 (186-235)||(32911577-32911626)
chr5 (186-254)||(14772536-14772603)
chr5 (186-238)||(43438340-43438391)
chr5 (128-179)||(694207-694258)
chr5 (129-180)||(32398090-32398141)
chr5 (140-179)||(35032358-35032397)
chr5 (134-180)||(3100412-3100458)
chr5 (189-251)||(10437725-10437786)
chr5 (186-248)||(18652850-18652911)
chr5 (188-240)||(71345-71399)
chr5 (131-180)||(5984070-5984119)
chr5 (131-180)||(11795740-11795789)
chr5 (131-180)||(14772633-14772682)
chr5 (189-249)||(15058817-15058875)
chr5 (131-180)||(18033442-18033491)
chr5 (131-180)||(25776991-25777040)
chr5 (131-180)||(26300115-26300164)
chr5 (138-179)||(31706047-31706088)
chr5 (186-235)||(33075150-33075198)
chr5 (130-179)||(35729436-35729485)
chr5 (138-179)||(41814394-41814435)
chr5 (185-241)||(11795820-11795875)
chr5 (132-180)||(14153374-14153422)
chr5 (131-179)||(15549413-15549461)
chr5 (134-178)||(29177800-29177844)
chr5 (185-233)||(33867933-33867981)
chr5 (136-180)||(36897751-36897795)
[»] scaffold0149 (1 HSPs)
scaffold0149 (186-240)||(24691-24744)
[»] scaffold0009 (1 HSPs)
scaffold0009 (133-180)||(7744-7791)
[»] scaffold1476 (1 HSPs)
scaffold1476 (186-240)||(744-797)
[»] scaffold0341 (2 HSPs)
scaffold0341 (134-180)||(2427-2473)
scaffold0341 (134-180)||(10082-10128)
[»] scaffold0024 (1 HSPs)
scaffold0024 (131-180)||(120232-120281)
[»] scaffold1640 (1 HSPs)
scaffold1640 (129-173)||(1139-1183)
[»] scaffold0036 (1 HSPs)
scaffold0036 (186-238)||(89602-89653)
[»] scaffold0007 (1 HSPs)
scaffold0007 (132-180)||(246800-246848)


Alignment Details
Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 40202420 - 40202502
Alignment:
Q  136 actattataagcaaaaatttacattttgaattcattcaattaatgtatgtatcatttaatgaatgaatataaaatgttaattttt 220  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||  |||||||||||| |||| ||||||||||||||||    
T  40202420 actattataagcaaaaatttacattttgcattcattcaattaatatatg--tcatttaatgaaagaatctaaaatgttaattttt 40202502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 9174534 - 9174486
Alignment:
Q  246 tataatgtaaaattgaaacgaaagaaactcatctcatcaattaatatac 294  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  9174534 tataatgtaaaattgtaacgaaagaaactcatctcatcaaataatatac 9174486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 331883 - 331945
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtata 249  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||| |||| | ||||||    
T  331883 atcatttaatgaatgaatctaaaatgttaa-tttttgcttataatagtgaccggagggtgtata 331945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 52866472 - 52866418
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaatt--ttttgcttataatagtgatcg 238  Q
    |||||||||||||||||| |||||||||||||  |||||||||||||||||||||    
T  52866472 atcatttaatgaatgaatctaaaatgttaattttttttgcttataatagtgatcg 52866418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 40639794 - 40639847
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  40639794 atcatttaatgaatgaatttaaaatgttaa-tttttgcttataatagtgaccgga 40639847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 10872808 - 10872759
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||||||||||| |||||  ||||||||||||||||    
T  10872808 cggtcactattataagcaaaaatttatattttagattcattcaattaatg 10872759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 12744905 - 12744954
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||||||    
T  12744905 cggtcactattataagcaaaaacttacattttagattcattcaattaatg 12744954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 34903719 - 34903675
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaatt 176  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||    
T  34903719 ggtcactattataagcaaaaatttacattttaaattcatttaatt 34903675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 249
Target Start/End: Complemental strand, 9170167 - 9170105
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtata 249  Q
    ||||||||| |||||||| |||||||| |||||||||||||||||||||| |||| | ||||||    
T  9170167 atcatttaacgaatgaatctaaaatgt-aattttttgcttataatagtgaccggagggtgtata 9170105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 249
Target Start/End: Complemental strand, 41253986 - 41253924
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtata 249  Q
    |||||||||||||||||||||||||||| | |||||| |||||||||||| |||| | ||||||    
T  41253986 atcatttaatgaatgaatataaaatgttga-tttttgattataatagtgaccggatggtgtata 41253924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 7823952 - 7824005
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    ||||||||||| |||||| ||||||||||| |||| |||||||||||||||||||    
T  7823952 atcatttaatggatgaatctaaaatgttaa-ttttagcttataatagtgatcgga 7824005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 7829128 - 7829181
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    ||||||||||| |||||| ||||||||||| |||| |||||||||||||||||||    
T  7829128 atcatttaatggatgaatctaaaatgttaa-ttttagcttataatagtgatcgga 7829181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 7882336 - 7882283
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||| ||||||| |||||||||||| |||||||||||||||||| ||||    
T  7882336 atcatttaattaatgaatctaaaatgttaat-ttttgcttataatagtgaccgga 7882283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 180
Target Start/End: Original strand, 20619002 - 20619044
Alignment:
Q  138 tattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||| ||||||||||||||||| ||||||||||||||||    
T  20619002 tattataaacaaaaatttacattttgcattcattcaattaatg 20619044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 24075502 - 24075449
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||||| ||||    
T  24075502 atcatttaatgaatgaatctaaaatgtt-gttttttgcttataatagtgaccgga 24075449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 34327593 - 34327646
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| ||||||||||| |||||| |||||||| ||||||||    
T  34327593 atcatttaatgaatgaatctaaaatgttaa-tttttgtttataataatgatcgga 34327646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 40639845 - 40639803
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattca 173  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  40639845 cggtcactattataagcaaaaattaacattttaaattcattca 40639803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 248
Target Start/End: Original strand, 40639880 - 40639941
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtat 248  Q
    |||||||||||||| ||| ||||||||| ||||| |||||||||||||||||| ||| |||||    
T  40639880 atcatttaatgaataaatttaaaatgttgatttt-tgcttataatagtgatcgaaaggtgtat 40639941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 45736820 - 45736774
Alignment:
Q  134 tcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||| |||| ||||| |||||||||||||||||    
T  45736820 tcactattataagcaaaattttatattttaaattcattcaattaatg 45736774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 48191770 - 48191717
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| |||||||||||| ||||| |||||||||||| ||||    
T  48191770 atcatttaatgaatgaatctaaaatgttaat-ttttgtttataatagtgaccgga 48191717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 12744986 - 12745034
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  12744986 atcatttaatgaatgtatctaaaatgttaa-tttttgcttataatagtga 12745034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 22497006 - 22496958
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||||||| |||||| |||| |||||||||||||||||||    
T  22497006 atcatttaatgaatgaatctaaaatattaa-tttttgcttataatagtga 22496958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 38677569 - 38677618
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||| ||||||||||  ||||||||| ||||||    
T  38677569 cggtcactattataagcaaaagtttacattttagattcattcatttaatg 38677618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 52215884 - 52215929
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaatt 176  Q
    ||||||||||||||||||||||||||||||||  |||||| |||||    
T  52215884 cggtcactattataagcaaaaatttacattttagattcatgcaatt 52215929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 54595845 - 54595797
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||||||| ||||||||| | |||||||||||||||||||    
T  54595845 atcatttaatgaatgaatctaaaatgttga-tttttgcttataatagtga 54595797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 12109918 - 12109986
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtataatgta 254  Q
    |||| ||||||||||||  ||||||||| ||||||| |||| |||| |||||||| | |||||||||||    
T  12109918 atcaattaatgaatgaaactaaaatgttgatttttttcttaaaataatgatcggaggatgtataatgta 12109986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 24694283 - 24694220
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtataa 250  Q
    |||||||||| ||||||| ||||||||| |||||| ||||||| |||||| |||||| |||||||    
T  24694283 atcatttaataaatgaatctaaaatgttgattttt-gcttatagtagtgaccggaagatgtataa 24694220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 41743725 - 41743677
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||| |||| ||||||||||| ||||||||| ||||||    
T  41743725 ggtcactattataagtaaaagtttacattttggattcattcagttaatg 41743677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 336068 - 336119
Alignment:
Q  129 ttcggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||| |||| ||||||||||  ||||||||| ||||||    
T  336068 ttcggtcactattataagtaaaagtttacattttagattcattcatttaatg 336119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 24596892 - 24596939
Alignment:
Q  128 tttcggtcactattataagcaaaaatttacattttgaattcattcaat 175  Q
    ||||||||| ||||||||| |||||||||||||||  |||||||||||    
T  24596892 tttcggtcattattataagtaaaaatttacattttagattcattcaat 24596939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 29389333 - 29389380
Alignment:
Q  133 gtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||||||||| |||||  |||| |||||||||||    
T  29389333 gtcactattataagcaaaaatttatattttagattcgttcaattaatg 29389380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 42681186 - 42681233
Alignment:
Q  133 gtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||| ||||||||||||||| |||||||| ||| ||||    
T  42681186 gtcactattataagtaaaaatttacattttaaattcatttaataaatg 42681233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 331934 - 331892
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattca 173  Q
    |||||||||||||||||||||||| |||||||  |||||||||    
T  331934 cggtcactattataagcaaaaattaacattttagattcattca 331892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 7592034 - 7591996
Alignment:
Q  138 tattataagcaaaaatttacattttgaattcattcaatt 176  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  7592034 tattataagcaaaaatttacattttaaattcatttaatt 7591996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 7823922 - 7823873
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgat 236  Q
    |||||||||| ||||||| |||||||||| ||| |||||||||||||||||    
T  7823922 atcatttaataaatgaatctaaaatgtta-tttattgcttataatagtgat 7823873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 7826808 - 7826861
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    ||||||||||  |||||| ||||||||||| |||| |||||||||||||||||||    
T  7826808 atcatttaatagatgaatctaaaatgttaa-ttttagcttataatagtgatcgga 7826861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 8504854 - 8504896
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattca 173  Q
    ||||||||||||||||||||||| ||||||||  |||||||||    
T  8504854 cggtcactattataagcaaaaatctacattttagattcattca 8504896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 21217221 - 21217168
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| ||||||| ||  ||||||||||||||||||| ||||    
T  21217221 atcatttaatgaatgaatctaaaatg-tagatttttgcttataatagtgaccgga 21217168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 21217170 - 21217212
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattca 173  Q
    ||||||||||||||||||||||| ||||||||  |||||||||    
T  21217170 cggtcactattataagcaaaaatctacattttagattcattca 21217212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 220
Target Start/End: Original strand, 23444358 - 23444392
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttt 220  Q
    |||||||||||||||||| ||||||||||||||||    
T  23444358 atcatttaatgaatgaatctaaaatgttaattttt 23444392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 37897770 - 37897815
Alignment:
Q  189 atttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||||    
T  37897770 atttaatgaatgaatttaaaatgttga-tttttgcttataatagtga 37897815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 52215965 - 52216018
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||| ||||| ||||||||| | ||||||||||||||||||| ||||    
T  52215965 atcatttaatgagtgaatctaaaatgttga-tttttgcttataatagtgaccgga 52216018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 9170116 - 9170157
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattc 172  Q
    |||||||||||||||||||||| |||||||||  ||||||||    
T  9170116 cggtcactattataagcaaaaaattacattttagattcattc 9170157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 10872727 - 10872679
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||||||| |||||| || | |||||||||||||||||||    
T  10872727 atcatttaatgaatgaatttaaaatattga-tttttgcttataatagtga 10872679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 12745039 - 12745006
Alignment:
Q  129 ttcggtcactattataagcaaaaatttacatttt 162  Q
    |||||||||||||||||||||||||| |||||||    
T  12745039 ttcggtcactattataagcaaaaattaacatttt 12745006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 24075581 - 24075536
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaatt 176  Q
    |||| |||||||||||||||||| ||||||||  ||||||||||||    
T  24075581 cggtaactattataagcaaaaatctacattttagattcattcaatt 24075536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 24722742 - 24722694
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||| ||||||| |||||| ||||||||| ||||||||||||||    
T  24722742 atcatttaataaatgaatctaaaatattaattttt-gcttataatagtga 24722694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 30519683 - 30519731
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||||||| |||||||||   |||||||||||||||||||    
T  30519683 atcatttaatgaatgaatctaaaatgtt-ggtttttgcttataatagtga 30519731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 242
Target Start/End: Original strand, 34365153 - 34365182
Alignment:
Q  213 taattttttgcttataatagtgatcggaag 242  Q
    ||||||||||||||||||||||||||||||    
T  34365153 taattttttgcttataatagtgatcggaag 34365182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 36344458 - 36344519
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgta 247  Q
    |||||||||||||||||| ||||||   || ||||| |||||||||||||||| | ||||||    
T  36344458 atcatttaatgaatgaatctaaaatacaaaatttttacttataatagtgatcgaaggttgta 36344519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 173
Target Start/End: Complemental strand, 37897817 - 37897776
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattca 173  Q
    ||||||||||||||||||||||  ||||||| ||||||||||    
T  37897817 ggtcactattataagcaaaaatcaacattttaaattcattca 37897776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 42929010 - 42929059
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||| | || |||||  ||||||||||||||||    
T  42929010 cggtcactattataagcaaaattctaaattttatattcattcaattaatg 42929059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 42930109 - 42930153
Alignment:
Q  193 aatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    ||||||||||| |||||||||   ||||||||||||||||||||||||    
T  42930109 aatgaatgaatttaaaatgtt---tttttgcttataatagtgatcgga 42930153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 43177096 - 43177141
Alignment:
Q  135 cactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||| ||||||| |||||||| |||||||| ||||||||    
T  43177096 cactattataaacaaaaatctacattttaaattcatttaattaatg 43177141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 47334646 - 47334695
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||| |||||||||||||| |||  ||||| |||||||||||||||||    
T  47334646 cggtcagtattataagcaaaactttgtattttaaattcattcaattaatg 47334695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 51060674 - 51060715
Alignment:
Q  138 tattataagcaaaaatttacattttgaattcattcaattaat 179  Q
    |||||||||||||||||||||||||  ||| |||||||||||    
T  51060674 tattataagcaaaaatttacattttagattaattcaattaat 51060715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 3074905 - 3074865
Alignment:
Q  140 ttataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||||||||  ||||||||| ||||||    
T  3074905 ttataagcaaaaatttacattttagattcattcatttaatg 3074865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 7882285 - 7882325
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcatt 171  Q
    |||||||||||||||||||||||| |||||||  |||||||    
T  7882285 cggtcactattataagcaaaaattaacattttagattcatt 7882325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 10841703 - 10841751
Alignment:
Q  133 gtcactattataagcaaaaatttacattttgaattcattcaattaatgt 181  Q
    ||||||||||||||||||||||||| | ||  ||||||||||| |||||    
T  10841703 gtcactattataagcaaaaatttacgtattagattcattcaataaatgt 10841751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 13900230 - 13900282
Alignment:
Q  129 ttcggtcactattataagcaaaaatttacattttga-attcattcaattaatg 180  Q
    |||||||||||||||||||||||||| || |||| | ||||||||||| ||||    
T  13900230 ttcggtcactattataagcaaaaattcacttttttagattcattcaataaatg 13900282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 22497087 - 22497039
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaat 179  Q
    ||||||||| || |||||||| ||||||||||  |||||||||||||||    
T  22497087 cggtcactaataaaagcaaaactttacattttagattcattcaattaat 22497039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 221
Target Start/End: Complemental strand, 23444310 - 23444278
Alignment:
Q  189 atttaatgaatgaatataaaatgttaatttttt 221  Q
    |||||||||||||||||||||| ||||||||||    
T  23444310 atttaatgaatgaatataaaatattaatttttt 23444278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 26104779 - 26104827
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||| ||||||||||||||||||||||   |||||||| ||||||    
T  26104779 ggtcactaatataagcaaaaatttacattttaggttcattcatttaatg 26104827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 134 - 250
Target Start/End: Complemental strand, 46412821 - 46412695
Alignment:
Q  134 tcactattataagcaaaaatttacattttgaattcattcaattaatg-----tatgt------atcatttaatgaatgaatataaaatgttaattttttg 222  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||     ||||       |||||||||||||||||| |||||| |||| ||||||    
T  46412821 tcactattataagtaaaaatttacattttggattcattcaattaatgatgtatatggtcatcaatcatttaatgaatgaatctaaaatattaa-tttttg 46412723  T
Q  223 cttataatagtgatcggaagttgtataa 250  Q
    |||||||||||||||||| | |||||||    
T  46412722 cttataatagtgatcggatggtgtataa 46412695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 3013695 - 3013748
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  3013695 atcatttaatgaatgaatgtaaaatgttaa-tttttgcttataatagtgaccgga 3013748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 45010842 - 45010891
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||| ||| |||||| |||||||||||||||||    
T  45010842 cggtcactattataagcaaaattttgcattttaaattcattcaattaatg 45010891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 49586093 - 49586142
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||||    
T  49586093 cggtcactattataagcaaaagtttacattttaaattcattcatttaatg 49586142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 18789842 - 18789886
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaatt 176  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||    
T  18789842 ggtcactattataagcaaaaatttacattttaaattcatttaatt 18789886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 129 - 173
Target Start/End: Original strand, 43738607 - 43738651
Alignment:
Q  129 ttcggtcactattataagcaaaaatttacattttgaattcattca 173  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||    
T  43738607 ttcggtcactattataagcaaaaattaacattttaaattcattca 43738651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 14967310 - 14967359
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgat 236  Q
    |||||||||||||||||| ||||||||| | ||||||||||||||||||||    
T  14967310 atcatttaatgaatgaatctaaaatgttga-tttttgcttataatagtgat 14967359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 23398474 - 23398421
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| ||||||||| | ||||||||||||||||||| ||||    
T  23398474 atcatttaatgaatgaatctaaaatgtt-agtttttgcttataatagtgaccgga 23398421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 24981926 - 24981979
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| ||||||||| | ||||||||||||||||||| ||||    
T  24981926 atcatttaatgaatgaatctaaaatgttga-tttttgcttataatagtgaccgga 24981979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 34954029 - 34953983
Alignment:
Q  134 tcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||||| |||||  ||||||||||||||||    
T  34954029 tcactattataagcaaaaatttatattttagattcattcaattaatg 34953983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 43738661 - 43738612
Alignment:
Q  185 tatcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||||||    
T  43738661 tatcatctaatgaatgaatttaaaatgttaat-ttttgcttataatagtga 43738612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 6758550 - 6758599
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||| ||| ||||||  ||||||||||||||||    
T  6758550 cggtcactattataagcaaaactttgcattttacattcattcaattaatg 6758599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 8338679 - 8338728
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||||| ||||||||  ||||||||| ||||||    
T  8338679 cggtcactattataagcaaaaatctacattttagattcattcatttaatg 8338728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 33939433 - 33939384
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||| ||||||||||  ||||||||| ||||||    
T  33939433 cggtcactattataagcaaaagtttacattttagattcattcatttaatg 33939384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 39420373 - 39420325
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  39420373 atcatttaatgaatcaatttaaaatgttaat-ttttgcttataatagtga 39420325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 42761457 - 42761506
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||| |||||||||||||| ||||||||||  ||||||||||||||||    
T  42761457 cggtcattattataagcaaaactttacattttagattcattcaattaatg 42761506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 45115306 - 45115257
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||||| ||||||||  ||||||||| ||||||    
T  45115306 cggtcactattataagcaaaaatctacattttagattcattcatttaatg 45115257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 3549788 - 3549832
Alignment:
Q  136 actattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||| ||||||||  ||||||||||||||||    
T  3549788 actattataagcaaaaatctacattttagattcattcaattaatg 3549832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 3549867 - 3549914
Alignment:
Q  189 atttaatgaatgaatataaaatgttaattttttgcttataatagtgatc 237  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| |||||    
T  3549867 atttaatgaatgaatttaaaatgttaa-tttttgcttataataatgatc 3549914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 1602871 - 1602804
Alignment:
Q  188 catttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtataatgtaa 255  Q
    |||||||||| ||||  |||||| | | |||||||||||||||||||| |||||| |||||| |||||    
T  1602871 catttaatgactgaacctaaaatatgatttttttgcttataatagtgaccggaaggtgtatattgtaa 1602804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 249
Target Start/End: Original strand, 14214554 - 14214676
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg-----tatgtatcatttaatgaatgaatataaaatgttaattttttgctt 225  Q
    |||||||||||||||||||||||| || ||||   |||||||||||||||      ||  |||||||| ||||||||  ||||| | ||| |||||||||    
T  14214554 cggtcactattataagcaaaaattcactttttaggttcattcaattaatggatcacatacatcatttattgaatgaacctaaaaag-taagtttttgctt 14214652  T
Q  226 ataatagtgatcggaagttgtata 249  Q
    |||||||||| |||| | ||||||    
T  14214653 ataatagtgaccggagggtgtata 14214676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 18607224 - 18607173
Alignment:
Q  128 tttcggtcactattataagcaaaaatttacattttgaattcattcaattaat 179  Q
    ||||| |||||||||||| ||||||| || ||||| ||||||||||||||||    
T  18607224 tttcgatcactattataaacaaaaatctatattttaaattcattcaattaat 18607173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 3013746 - 3013704
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattca 173  Q
    |||||||||||||||||||||||| |||||||  |||||||||    
T  3013746 cggtcactattataagcaaaaattaacattttacattcattca 3013704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 6508404 - 6508450
Alignment:
Q  134 tcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||||||||||| ||  ||||||||| ||||||    
T  6508404 tcactattataagcaaaaatttacatcttagattcattcatttaatg 6508450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 10256836 - 10256783
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||| ||||||||| ||||| || |||||||| ||||||||||||||||||    
T  10256836 atcatttattgaatgaatctaaaaagtgaatttttt-cttataatagtgatcgga 10256783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 50308713 - 50308766
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||  |||||||||  |||| ||||||||||||||||||||    
T  50308713 atcatttaatgaatgaacttaaaatgttggtttt-tgcttataatagtgatcgga 50308766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 50550204 - 50550257
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| ||||||||| | |||||  |||||||||||||||||    
T  50550204 atcatttaatgaatgaatctaaaatgttga-tttttctttataatagtgatcgga 50550257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 3013615 - 3013664
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaattaatgt 181  Q
    ||||||||||||||||||||| ||| |||||  ||| |||||||||||||    
T  3013615 ggtcactattataagcaaaaaattatattttagatttattcaattaatgt 3013664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 5431345 - 5431394
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||||||||| || ||||  ||||||||||| ||||    
T  5431345 cggtcactattataagcaaaaattcactttttagattcattcaataaatg 5431394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 10832130 - 10832081
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||| ||||||| ||||||||   |||||||||||||||    
T  10832130 cggtcactattataaacaaaaatctacattttaggttcattcaattaatg 10832081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 15351719 - 15351768
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||| | |||||||||||||||| ||||| |||||||||||| ||||    
T  15351719 cggtcacaaatataagcaaaaatttatattttaaattcattcaataaatg 15351768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 24981896 - 24981848
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    ||||||||||||||| || ||||| ||||| |||||||||||||||||||    
T  24981896 atcatttaatgaatgtatctaaaacgttaa-tttttgcttataatagtga 24981848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 34491253 - 34491209
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataata 231  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||||    
T  34491253 atcatttaatgaatgaatctaaaatgttaaattttt-cttataata 34491209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 34953951 - 34953903
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||||||| |||||| || | |||||||||||||||||||    
T  34953951 atcatttaatgaatgaatttaaaatattga-tttttgcttataatagtga 34953903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 39216107 - 39216156
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||| ||| ||||||  | ||||||||||||||    
T  39216107 cggtcactattataagcaaaactttgcattttagactcattcaattaatg 39216156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 48083559 - 48083511
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||||||  |||||| |||| |||||||||||||||||||    
T  48083559 atcatttaatgaatgaacctaaaatattaa-tttttgcttataatagtga 48083511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 5595471 - 5595427
Alignment:
Q  191 ttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    ||||||||||||| ||||||||||   ||||||||||||||||||    
T  5595471 ttaatgaatgaatctaaaatgttagaattttgcttataatagtga 5595427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 6156689 - 6156634
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaag 242  Q
    |||||||| ||||||||| ||||| ||| |||||| | |||||||||||||||||||    
T  6156689 atcatttattgaatgaatctaaaaagttgattttt-gtttataatagtgatcggaag 6156634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 9101114 - 9101074
Alignment:
Q  137 ctattataagcaaaaatttacattttgaattcattcaatta 177  Q
    |||||||||||||||||  |||||||| |||||||||||||    
T  9101114 ctattataagcaaaaatcaacattttggattcattcaatta 9101074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 13043475 - 13043427
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||| ||||||| | |||||  ||||||||||||||||    
T  13043475 ggtcactattataagtaaaaattaatattttagattcattcaattaatg 13043427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 27502956 - 27502903
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  27502956 atcatttaatgaatgaatttaaaatgttaat-ttttgcttataatagtgatcgga 27502903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 10117106 - 10117057
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  10117106 cggtcactattataagcaaaaatttacattttagattcattcaattaatg 10117057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 13496571 - 13496522
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  13496571 cggtcactattataagcaaaaatttacattttaaattcattcatttaatg 13496522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 13290039 - 13290087
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaat 179  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  13290039 cggtcactattataagcaaaaaattacattttggattcattcaattaat 13290087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 240
Target Start/End: Original strand, 10679134 - 10679251
Alignment:
Q  129 ttcggtcactattataagcaaaaatttacattttgaattcattcaattaatg---tatgt----atcatttaatgaatgaatataaaatgttaatttttt 221  Q
    ||||||||||||||||  ||||||||||||||||  ||||||| ||||||||   ||| |    || ||||||||||||||||||| ||||||| |||||    
T  10679134 ttcggtcactattatagacaaaaatttacattttacattcatttaattaatgatttatatagacattatttaatgaatgaatataagatgttaa-ttttt 10679232  T
Q  222 gcttataatagtgatcgga 240  Q
    ||||||| || ||||||||    
T  10679233 gcttatattaatgatcgga 10679251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 13841850 - 13841901
Alignment:
Q  129 ttcggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||| ||||    
T  13841850 ttcggtcactattataagcaaaaatttactttttaaattcattcaataaatg 13841901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 28939422 - 28939466
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaatt 176  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||    
T  28939422 ggtcactattataagcaaaaatttacattttaaattcatttaatt 28939466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 249
Target Start/End: Complemental strand, 11295719 - 11295657
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtata 249  Q
    ||||||||||||||| || ||||||||| |||||| |||||||||||||| |||||| ||||||    
T  11295719 atcatttaatgaatgtatctaaaatgttgattttt-gcttataatagtgaccggaaggtgtata 11295657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 3444629 - 3444675
Alignment:
Q  134 tcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||| ||||||||||||||||  ||||||||||||||||    
T  3444629 tcactattataaacaaaaatttacattttatattcattcaattaatg 3444675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 10934688 - 10934741
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| ||||||||| | ||||||||||||||||||| ||||    
T  10934688 atcatttaatgaatgaatctaaaatgttga-tttttgcttataatagtgaccgga 10934741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 5888391 - 5888343
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||||||    
T  5888391 atcatttaatgaatgaatctaaaacgttaa-tttttgcttataatagtga 5888343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 7258721 - 7258672
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||| |||| ||||||||||  ||||||||||||||||    
T  7258721 cggtcactattataagtaaaattttacattttagattcattcaattaatg 7258672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 4613694 - 4613646
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||| ||||    
T  4613694 ggtcactattataagtaaaaattgacattttaaattcattcaataaatg 4613646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 13964424 - 13964472
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||||  ||||||| |||||||||||| ||||    
T  13964424 ggtcactattataagcaaaaatcaacattttaaattcattcaataaatg 13964472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 18078052 - 18078008
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaatt 176  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||||    
T  18078052 ggtcactattataagcaaaaatttaaattttaaattcatttaatt 18078008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 173
Target Start/End: Original strand, 27502908 - 27502947
Alignment:
Q  134 tcactattataagcaaaaatttacattttgaattcattca 173  Q
    ||||||||||||||||||||| ||||||| ||||||||||    
T  27502908 tcactattataagcaaaaattaacattttaaattcattca 27502947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 36648652 - 36648702
Alignment:
Q  185 tatcatttaatgaatgaatataaaatgttaattttttgcttataatagtgat 236  Q
    ||||||||||||||| ||| ||||||| |||||||||| |||||||||||||    
T  36648652 tatcatttaatgaataaatctaaaatg-taattttttgtttataatagtgat 36648702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 44319577 - 44319523
Alignment:
Q  185 tatcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    ||||||||||| ||||||| |||||||||||  |||||||||||||||||| ||||    
T  44319577 tatcatttaataaatgaatctaaaatgttaa-cttttgcttataatagtgaccgga 44319523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 2296529 - 2296476
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| ||||||| |||  |||||||||||||| ||||||||    
T  2296529 atcatttaatgaatgaatctaaaatg-taaaattttgcttataataatgatcgga 2296476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 248
Target Start/End: Complemental strand, 3444677 - 3444616
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtat 248  Q
    |||||| | ||||||||||||||||| ||| |||||| |||||||||||||| |||| |||||    
T  3444677 atcattaattgaatgaatataaaatg-taaatttttgtttataatagtgatctgaaggtgtat 3444616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 10815450 - 10815496
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaattaa 178  Q
    |||||||||||  | |||||||||||||||| |||||||||||||||    
T  10815450 ggtcactattaataacaaaaatttacattttaaattcattcaattaa 10815496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 220
Target Start/End: Original strand, 11295749 - 11295783
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttt 220  Q
    |||||||||||||||||| ||||||||||||||||    
T  11295749 atcatttaatgaatgaatctaaaatgttaattttt 11295783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 13496520 - 13496573
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||| ||||||||||| ||||||| ||| ||||||||||||||||||| ||||    
T  13496520 atcattaaatgaatgaatttaaaatg-taaatttttgcttataatagtgaccgga 13496573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 1662713 - 1662664
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||| |||||||||||| ||||||||  ||||||||| ||||||    
T  1662713 cggtcactataataagcaaaaatatacattttagattcattcatttaatg 1662664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 1739701 - 1739652
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||| ||||||||||||||||| ||||  || |||||||||||||    
T  1739701 cggtcactaatataagcaaaaatttactttttagatacattcaattaatg 1739652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 7484702 - 7484746
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataata 231  Q
    |||||||||||||||||| ||||||||| | |||||||||||||||    
T  7484702 atcatttaatgaatgaatctaaaatgttga-tttttgcttataata 7484746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 13290119 - 13290168
Alignment:
Q  185 tatcatttaatgaatgaatataaaatgttaa-ttttttgcttataatagt 233  Q
    ||||||||||||||||||| |||||| |||| |||||| |||||||||||    
T  13290119 tatcatttaatgaatgaatctaaaatattaattttttttcttataatagt 13290168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 13964474 - 13964426
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||| ||||||||| ||||||||| |||||| ||||||||||||||    
T  13964474 atcatttattgaatgaatttaaaatgttgattttt-gcttataatagtga 13964426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 27518451 - 27518402
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||| ||||||| ||||||||  ||||||||| ||||||    
T  27518451 cggtcactattataaacaaaaatctacattttagattcattcatttaatg 27518402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 33070301 - 33070252
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||| ||| ||||||  ||||||||| ||||||    
T  33070301 cggtcactattataagcaaaattttgcattttagattcattcatttaatg 33070252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 41753813 - 41753765
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||||||| ||||||||| |  ||||||||||||||||||    
T  41753813 atcatttaatgaatgaatttaaaatgttga-attttgcttataatagtga 41753765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 3385531 - 3385484
Alignment:
Q  185 tatcatttaatgaatgaatataaaatgttaattttttgcttataatagt 233  Q
    ||||||||||||||| ||| ||||||||| | |||||||||||||||||    
T  3385531 tatcatttaatgaataaatttaaaatgttga-tttttgcttataatagt 3385484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 11335703 - 11335655
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaat 179  Q
    |||||| |||||||||||||| ||| ||||||  |||||||||||||||    
T  11335703 cggtcattattataagcaaaactttgcattttagattcattcaattaat 11335655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 24017727 - 24017771
Alignment:
Q  136 actattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||||  |||||| ||||| |||||||||||    
T  24017727 actattataagcaaaaattaccattttaaattccttcaattaatg 24017771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 24287840 - 24287777
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtataa 250  Q
    |||||||||||||||||| |||||||  ||  |||||||||||||||||| |||| | |||||||    
T  24287840 atcatttaatgaatgaatctaaaatg-caaagttttgcttataatagtgaccggagggtgtataa 24287777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 34326380 - 34326332
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||| |||| ||| ||||||  ||||||||||||||||    
T  34326380 ggtcactattataagtaaaattttgcattttacattcattcaattaatg 34326332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 44525101 - 44525145
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaatt 176  Q
    |||||||||||||||||||| |||||||||| |||| ||| ||||    
T  44525101 ggtcactattataagcaaaattttacattttaaatttatttaatt 44525145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 53176363 - 53176310
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  53176363 atcatttaatgaatgaatataaaatgttaat-ttttacttataatagtgatcgga 53176310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 6975069 - 6975020
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  6975069 cggtcactattataagcaaaaatcaacattttgaattcattcatttaatg 6975020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 54713102 - 54713151
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||||||||||||||  ||||||||| ||||||    
T  54713102 cggtcactattataagcaaaaatttacattttagattcattcatttaatg 54713151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 54532888 - 54532844
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaatt 176  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||    
T  54532888 ggtcactattataagcaaaaatttacattttaaattcatttaatt 54532844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 4406375 - 4406328
Alignment:
Q  133 gtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  4406375 gtcattattataagcaaaaatttatattttggattcattcaattaatg 4406328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 12168636 - 12168687
Alignment:
Q  129 ttcggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||| ||||||||| ||||| ||||||| |||||||||    
T  12168636 ttcggtcactattataagtaaaaatttaaattttaaattcatacaattaatg 12168687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 23568465 - 23568518
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| ||||||||| | ||||||||||||||||||| ||||    
T  23568465 atcatttaatgaatgaatctaaaatgtt-agtttttgcttataatagtgaccgga 23568518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 47181563 - 47181605
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattca 173  Q
    ||||||||||||||||||||||| |||||||| ||||||||||    
T  47181563 cggtcactattataagcaaaaatctacattttaaattcattca 47181605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 24798212 - 24798260
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||||||| |||||| |||| |||||||||||||||||||    
T  24798212 atcatttaatgaatgaatttaaaatattaa-tttttgcttataatagtga 24798260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 49481884 - 49481933
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||| ||||||||||  ||||||||| ||||||    
T  49481884 cggtcactattataagcaaaagtttacattttagattcattcatttaatg 49481933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 52914083 - 52914131
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||||||| |||||| |||| |||||||||||||||||||    
T  52914083 atcatttaatgaatgaatctaaaatattaa-tttttgcttataatagtga 52914131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 54713153 - 54713089
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtataat 251  Q
    |||||| ||||||||||| |||||||| ||||||| |||||||||||||| |||| | ||||||||    
T  54713153 atcattaaatgaatgaatctaaaatgtaaattttt-gcttataatagtgaccggagggtgtataat 54713089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 3669561 - 3669609
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||| ||||| |||||  ||||||||||||||||    
T  3669561 ggtcactattataagcaaatatttatattttagattcattcaattaatg 3669609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 209
Target Start/End: Complemental strand, 26636573 - 26636495
Alignment:
Q  134 tcactattataagcaaaaatttacattttgaattcattcaattaatg---tatgtatcatttaatgaatgaatataaaa 209  Q
    ||||||||||||| |||||||||  ||||  ||||||||||| ||||   ||||||||||||| ||||||||| |||||    
T  26636573 tcactattataagtaaaaatttattttttagattcattcaataaatgatgtatgtatcatttattgaatgaatctaaaa 26636495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 38381980 - 38382020
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcatt 171  Q
    ||||||||||||||||||||||||||||||||  |||||||    
T  38381980 cggtcactattataagcaaaaatttacattttagattcatt 38382020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 53176442 - 53176394
Alignment:
Q  133 gtcactattataagcaaaaatttacattttgaattcattcaattaatgt 181  Q
    |||||||||||||||||||||||| |||||  ||||||||| |||||||    
T  53176442 gtcactattataagcaaaaatttatattttagattcattcagttaatgt 53176394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 18881477 - 18881430
Alignment:
Q  134 tcactattataagcaaaaatttacattttgaattcattcaattaatgt 181  Q
    |||||||||||| ||||||| ||||||||  |||||||||||||||||    
T  18881477 tcactattataaccaaaaatatacattttagattcattcaattaatgt 18881430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 21224770 - 21224833
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtata 249  Q
    |||||||||||||||||| ||||||||   ||||||| |||||||||||| |||| | ||||||    
T  21224770 atcatttaatgaatgaatctaaaatgtagtttttttgtttataatagtgaccggagggtgtata 21224833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 22493661 - 22493711
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatc 237  Q
    |||||||||| |||||||||||||||||  |||||||||||||||| |||||    
T  22493661 atcatttaataaatgaatataaaatgtt-gttttttgcttataatactgatc 22493711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 38716439 - 38716396
Alignment:
Q  136 actattataagcaaaaatttacattttgaattcattcaattaat 179  Q
    |||||||||| ||||||||||||||||  |||||||||||||||    
T  38716439 actattataaacaaaaatttacattttagattcattcaattaat 38716396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 40814715 - 40814664
Alignment:
Q  195 tgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgt 246  Q
    ||||||||| |||||| ||||| ||||  |||||||||||||||||||||||    
T  40814715 tgaatgaatctaaaatattaatattttaattataatagtgatcggaagttgt 40814664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 220
Target Start/End: Original strand, 40814753 - 40814788
Alignment:
Q  185 tatcatttaatgaatgaatataaaatgttaattttt 220  Q
    ||||||||||||||||||| ||||||||||||||||    
T  40814753 tatcatttaatgaatgaatctaaaatgttaattttt 40814788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 40952404 - 40952350
Alignment:
Q  185 tatcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    ||||||||||||||||||| ||||||||| | || |||||||||||||||| ||||    
T  40952404 tatcatttaatgaatgaatctaaaatgttga-ttattgcttataatagtgaacgga 40952350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 47308116 - 47308167
Alignment:
Q  129 ttcggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||| ||||||||||||||||||||  |||||||| ||||||||| ||||||    
T  47308116 ttcgatcactattataagcaaaaatcaacattttggattcattcatttaatg 47308167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 3511716 - 3511762
Alignment:
Q  134 tcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||| ||||||||||| ||||||||||  ||||||||||||||||    
T  3511716 tcactaatataagcaaaactttacattttagattcattcaattaatg 3511762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 180
Target Start/End: Complemental strand, 7740619 - 7740577
Alignment:
Q  138 tattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||    
T  7740619 tattataagcaaaaatttatattttaaattcattaaattaatg 7740577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 14451012 - 14450959
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||| ||||||||||| ||||||||  |||||| |||||||||||||||||||    
T  14451012 atcattaaatgaatgaatctaaaatgtagattttt-gcttataatagtgatcgga 14450959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 14450964 - 14451010
Alignment:
Q  134 tcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||||| ||||||||  ||||||||| ||||||    
T  14450964 tcactattataagcaaaaatctacattttagattcattcatttaatg 14451010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 19878198 - 19878149
Alignment:
Q  190 tttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||| |||||||||||| ||||||||||| |||||| ||||    
T  19878198 tttaatgaatgaatctaaaatgttaat-ttttgcttatattagtgaccgga 19878149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 19878337 - 19878292
Alignment:
Q  190 tttaatgaatgaatataaaatgttaattttttgcttataatagtgat 236  Q
    |||||||||||||| |||||||||||| ||||||||||| |||||||    
T  19878337 tttaatgaatgaatctaaaatgttaat-ttttgcttatattagtgat 19878292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 25022573 - 25022520
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| ||||||||||| ||| || |||||||| ||||||||    
T  25022573 atcatttaatgaatgaatgtaaaatgttaa-tttgtgtttataataatgatcgga 25022520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 34616300 - 34616353
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    ||||||||||||||| || ||||| ||| ||||| ||||||||||||||||||||    
T  34616300 atcatttaatgaatgtatctaaaacgttgatttt-tgcttataatagtgatcgga 34616353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 38382031 - 38381978
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||| ||||||| |||||||| ||||||| |||||||||||||| ||||    
T  38382031 atcatttaatcaatgaatctaaaatgtaaattttt-gcttataatagtgaccgga 38381978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 38539485 - 38539531
Alignment:
Q  134 tcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||||| ||||| |||| ||||||| ||||    
T  38539485 tcactattataagcaaaaatttatattttaaatttattcaataaatg 38539531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 231
Target Start/End: Original strand, 41856293 - 41856339
Alignment:
Q  185 tatcatttaatgaatgaatataaaatgttaattttttgcttataata 231  Q
    ||||||| ||| ||||||| ||||||||| |||||||||||||||||    
T  41856293 tatcattaaataaatgaatctaaaatgttgattttttgcttataata 41856339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 47181614 - 47181561
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| ||||||| ||  ||||||||||||||||||| ||||    
T  47181614 atcatttaatgaatgaatttaaaatg-tagatttttgcttataatagtgaccgga 47181561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 220
Target Start/End: Original strand, 54931904 - 54931938
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttt 220  Q
    |||||||||||||||||| ||||||||||||||||    
T  54931904 atcatttaatgaatgaatctaaaatgttaattttt 54931938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 55934695 - 55934642
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| ||||||||| |  |||||||||||||||||| ||||    
T  55934695 atcatttaatgaatgaatctaaaatgtt-aggttttgcttataatagtgaccgga 55934642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 178
Target Start/End: Original strand, 10308237 - 10308286
Alignment:
Q  129 ttcggtcactattataagcaaaaatttacattttgaattcattcaattaa 178  Q
    |||||||||| |||||||||||| |||| |||||  ||||||||||||||    
T  10308237 ttcggtcactgttataagcaaaactttatattttagattcattcaattaa 10308286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 12672458 - 12672499
Alignment:
Q  138 tattataagcaaaaatttacattttgaattcattcaattaat 179  Q
    |||||||| ||||||||||||||||  |||||||||||||||    
T  12672458 tattataaacaaaaatttacattttagattcattcaattaat 12672499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 20215571 - 20215620
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||||||||| |||||||   |||||||||| ||||    
T  20215571 cggtcactattataagcaaaaattgacattttaggttcattcaataaatg 20215620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 173
Target Start/End: Complemental strand, 24798262 - 24798221
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattca 173  Q
    ||||||||||||||||||||||| | ||||| ||||||||||    
T  24798262 ggtcactattataagcaaaaattaatattttaaattcattca 24798221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 173
Target Start/End: Original strand, 27537061 - 27537102
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattca 173  Q
    ||||| |||||||||||||||||||||||||  |||||||||    
T  27537061 ggtcattattataagcaaaaatttacattttagattcattca 27537102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 27537111 - 27537067
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataata 231  Q
    |||||||||||||||||| ||||||| ||| |||||||||||||||    
T  27537111 atcatttaatgaatgaatctaaaatg-taaatttttgcttataata 27537067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 33124153 - 33124104
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaattaatgt 181  Q
    ||||||| || |||||||||||| |||||||  |||||||||||||||||    
T  33124153 ggtcactcttttaagcaaaaattaacattttacattcattcaattaatgt 33124104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 36072574 - 36072619
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaatt 176  Q
    ||||||||||||||||||||| ||| ||||||  ||||||||||||    
T  36072574 cggtcactattataagcaaaattttgcattttagattcattcaatt 36072619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 52281122 - 52281171
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||||| | ||||||  ||||||||||| ||||    
T  52281122 cggtcactattataagcaaaaatatgcattttatattcattcaataaatg 52281171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 55936072 - 55936120
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||||||| |||||| || | |||||||||||||||||||    
T  55936072 atcatttaatgaatgaatctaaaatattga-tttttgcttataatagtga 55936120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 12912664 - 12912613
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcg 238  Q
    |||||||||||||| ||| |||||||||||| |||| ||||||||| ||||||    
T  12912664 atcatttaatgaataaatctaaaatgttaat-ttttacttataataatgatcg 12912613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 13689672 - 13689624
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaat 179  Q
    ||||||||| |||||||||||||| || ||||  |||||||||||||||    
T  13689672 cggtcactaatataagcaaaaattcactttttagattcattcaattaat 13689624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 16578644 - 16578596
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||| |||||| |||||||| | |||||||||| ||||    
T  16578644 ggtcactattataagtaaaaatctacattttaagttcattcaataaatg 16578596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 33037000 - 33036956
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaat 175  Q
    ||||||||||||||||||||| || |||||||  |||||||||||    
T  33037000 cggtcactattataagcaaaatttaacattttctattcattcaat 33036956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 40952477 - 40952437
Alignment:
Q  138 tattataagcaaaaatttacattttgaattcattcaattaa 178  Q
    ||||||||||||||||||| |||||  ||||||||||||||    
T  40952477 tattataagcaaaaatttatattttagattcattcaattaa 40952437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 47308169 - 47308118
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcg 238  Q
    |||||| |||||||||||  |||||||| |||||| |||||||||||||||||    
T  47308169 atcattaaatgaatgaatccaaaatgttgattttt-gcttataatagtgatcg 47308118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 10095774 - 10095721
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||| ||||    
T  10095774 atcatttaatgaatgaatctaaaatgttaat-ttttgcttataatagtgaccgga 10095721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 47535055 - 47535109
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||| ||||||||| ||||| |||| |||||||||||||||||||||||||    
T  47535055 atcatttattgaatgaatctaaaaggttatttttttgcttataatagtgatcgga 47535109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 25245228 - 25245292
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtataat 251  Q
    |||||||||||||||||| ||||||||| | ||||||||||||||||||| |||| | ||||||||    
T  25245228 atcatttaatgaatgaatctaaaatgttga-tttttgcttataatagtgaccggagggtgtataat 25245292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 31813415 - 31813464
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  31813415 cggtcactattataaacaaaaatttacattttagattcattcaattaatg 31813464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 249
Target Start/End: Original strand, 3882639 - 3882699
Alignment:
Q  189 atttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtata 249  Q
    ||||||||||||||| ||||||| || |||||| |||||||||||||||||| | ||||||    
T  3882639 atttaatgaatgaatctaaaatgatattttttttcttataatagtgatcggatggtgtata 3882699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 24280956 - 24280908
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||| |||||| |||||||| |||||||||||||||||    
T  24280956 ggtcactattataagtaaaaatctacattttaaattcattcaattaatg 24280908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 257
Target Start/End: Complemental strand, 41404070 - 41404000
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtataatgtaaaa 257  Q
    |||||||||||||||||| ||||||| ||| ||||||||||||||||||| |||| | ||||| || |||||    
T  41404070 atcatttaatgaatgaatctaaaatgataa-tttttgcttataatagtgaccggaggatgtattatttaaaa 41404000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 5950279 - 5950332
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| ||||||||| | ||||||||||||||||||| ||||    
T  5950279 atcatttaatgaatgaatctaaaatgtt-agtttttgcttataatagtgaccgga 5950332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 6455604 - 6455551
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||| ||||||||||| |||||||| ||||||| |||||||||||||||||||    
T  6455604 atcattaaatgaatgaatctaaaatgtaaattttt-gcttataatagtgatcgga 6455551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 6455556 - 6455602
Alignment:
Q  134 tcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||    
T  6455556 tcactattataagcaaaaatttacattttagattcattcatttaatg 6455602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 27242678 - 27242632
Alignment:
Q  135 cactattataagcaaaaatttacattttgaattcattcaattaatgt 181  Q
    ||||||||||||||||||| ||||||||||||||| || ||||||||    
T  27242678 cactattataagcaaaaatctacattttgaattcaatctattaatgt 27242632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 43103127 - 43103074
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||| ||||||| |||||||||||| |||||||||||||||||| ||||    
T  43103127 atcatttaataaatgaatttaaaatgttaat-ttttgcttataatagtgaccgga 43103074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 45002082 - 45002128
Alignment:
Q  133 gtcactattataagcaaaaatttacattttgaattcattcaattaat 179  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||||||    
T  45002082 gtcactattataaacaaaactttacattttaaattcattcaattaat 45002128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 2943267 - 2943219
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||||||| ||||||||| | |||||||||||||||||||    
T  2943267 atcatttaatgaatgaatctaaaatgttga-tttttgcttataatagtga 2943219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 21886471 - 21886520
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||| ||||||||||||||||||| |||||  ||||||||||||||||    
T  21886471 cggtcattattataagcaaaaatttatattttagattcattcaattaatg 21886520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 23818479 - 23818431
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||||||| ||||||||| | |||||||||||||||||||    
T  23818479 atcatttaatgaatgaatctaaaatgttga-tttttgcttataatagtga 23818431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 249
Target Start/End: Original strand, 785636 - 785699
Alignment:
Q  185 tatcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtata 249  Q
    ||||||||| ||||||||  |||||||| |||||||  ||||||||||||| |||||||||||||    
T  785636 tatcatttattgaatgaacgtaaaatgtgaatttttc-cttataatagtgaccggaagttgtata 785699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 2943348 - 2943300
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaat 179  Q
    |||||||||||||||||||||| ||| |||||  |||||||||||||||    
T  2943348 cggtcactattataagcaaaaaattatattttacattcattcaattaat 2943300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 173
Target Start/End: Complemental strand, 8447855 - 8447811
Alignment:
Q  129 ttcggtcactattataagcaaaaatttacattttgaattcattca 173  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||    
T  8447855 ttcggtcactattataagcaaaaatctacattttagattcattca 8447811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 43103076 - 43103116
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcatt 171  Q
    |||||||||||||||||||||||| ||||||| ||||||||    
T  43103076 cggtcactattataagcaaaaattaacattttaaattcatt 43103116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 8282441 - 8282492
Alignment:
Q  129 ttcggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||| ||| ||||||||  |||||||| ||||||||||||||||||||||||    
T  8282441 ttcgatcattattataaataaaaatttgcattttgaattcattcaattaatg 8282492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 28306317 - 28306368
Alignment:
Q  129 ttcggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||| ||||||| ||||||||  ||||||||| ||||||    
T  28306317 ttcggtcactattataaccaaaaatctacattttagattcattcatttaatg 28306368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 2943306 - 2943359
Alignment:
Q  195 tgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtata 249  Q
    ||||||||| |||||| | |||||||||||||||||||||| |||||| ||||||    
T  2943306 tgaatgaatgtaaaatat-aattttttgcttataatagtgaccggaaggtgtata 2943359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 6847283 - 6847329
Alignment:
Q  134 tcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||||||| ||||||  ||| ||||||||||||    
T  6847283 tcactattataagcaaaaatttgcattttatatttattcaattaatg 6847329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 7295141 - 7295194
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||| ||||||| ||||||||||| |||||| |||||||| ||||||||    
T  7295141 atcatttaataaatgaatgtaaaatgttaa-tttttgtttataataatgatcgga 7295194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 7701243 - 7701190
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| ||||||| ||  ||||||||||||||||||| ||||    
T  7701243 atcatttaatgaatgaatctaaaatg-tagatttttgcttataatagtgaccgga 7701190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 7701192 - 7701234
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattca 173  Q
    ||||||||||||||||||||||| ||||||||  |||||||||    
T  7701192 cggtcactattataagcaaaaatctacattttagattcattca 7701234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 10095723 - 10095765
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattca 173  Q
    |||||||||||||||||||||||| |||||||  |||||||||    
T  10095723 cggtcactattataagcaaaaattaacattttagattcattca 10095765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 25245141 - 25245191
Alignment:
Q  131 cggtcactattataagc-aaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||| ||||| |||||||||  ||||||||||||||||    
T  25245141 cggtcactattataagcaaaaaaattacattttacattcattcaattaatg 25245191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 28321616 - 28321563
Alignment:
Q  189 atttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagt 243  Q
    ||||| ||||||||| |||||||||||| ||||||||| |||||||||| |||||    
T  28321616 atttattgaatgaatctaaaatgttaat-ttttgcttacaatagtgatcagaagt 28321563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 30138921 - 30138875
Alignment:
Q  134 tcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||| ||||||| |||||||||||||||  ||||||||||||||||    
T  30138921 tcactgttataagtaaaaatttacattttagattcattcaattaatg 30138875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 39013031 - 39012978
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||| ||||||||||||| |||||| |||| ||||||||||||||||| ||||||    
T  39013031 atcacttaatgaatgaatttaaaatattaa-tttttgcttataatagtaatcgga 39012978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 46022633 - 46022686
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| ||||||||  ||||||| ||||||||||||| ||||    
T  46022633 atcatttaatgaatgaatctaaaatgtagatttttt-cttataatagtgaccgga 46022686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 247
Target Start/End: Complemental strand, 6847331 - 6847271
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgta 247  Q
    |||||| | ||||| |||||||||||  ||||||| ||||||||||||||||||||| ||||    
T  6847331 atcattaattgaataaatataaaatgcaaattttt-gcttataatagtgatcggaaggtgta 6847271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 9555264 - 9555313
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||| ||||| |||| |||||||||| |||| ||||||||||||    
T  9555264 cggtcactatcataagtaaaattttacattttaaatttattcaattaatg 9555313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 23797484 - 23797435
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||| |||| ||| ||||||  ||||||||||||||||    
T  23797484 cggtcactattataagtaaaattttgcattttagattcattcaattaatg 23797435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 25245184 - 25245139
Alignment:
Q  195 tgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    ||||||||| |||||||| | |||||||||||||||||||| ||||    
T  25245184 tgaatgaatgtaaaatgtaatttttttgcttataatagtgaccgga 25245139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 31115664 - 31115616
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    ||||||||||| |||||| ||||||||||| | |||||||||||||||||    
T  31115664 atcatttaatggatgaatctaaaatgttaa-tctttgcttataatagtga 31115616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 38815142 - 38815188
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaat 179  Q
    ||||||||||||||| ||||  |||||||||| ||||||||||||||||    
T  38815142 cggtcactattataatcaaa--tttacattttaaattcattcaattaat 38815188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 41872187 - 41872138
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||| ||||||||||||| ||||||||  ||||||||| ||||||    
T  41872187 cggtcactaatataagcaaaaatctacattttagattcattcatttaatg 41872138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 43813129 - 43813178
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||||||||  ||||  ||||||||||| ||||    
T  43813129 cggtcactattataagcaaaaatttaatttttagattcattcaataaatg 43813178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 173
Target Start/End: Original strand, 2943214 - 2943258
Alignment:
Q  129 ttcggtcactattataagcaaaaatttacattttgaattcattca 173  Q
    |||||||||||||||||||||||||  |||||||  |||||||||    
T  2943214 ttcggtcactattataagcaaaaatcaacattttagattcattca 2943258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 173
Target Start/End: Original strand, 23797350 - 23797394
Alignment:
Q  129 ttcggtcactattataagcaaaaatttacattttgaattcattca 173  Q
    ||||||||||||||||||||||| ||| ||||||  |||||||||    
T  23797350 ttcggtcactattataagcaaaattttgcattttagattcattca 23797394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 173
Target Start/End: Complemental strand, 25768757 - 25768713
Alignment:
Q  129 ttcggtcactattataagcaaaaatttacattttgaattcattca 173  Q
    |||||||||||||||||||||||||  |||||||  |||||||||    
T  25768757 ttcggtcactattataagcaaaaatacacattttagattcattca 25768713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 28752163 - 28752210
Alignment:
Q  185 tatcatttaatgaatgaatataaaatgttaattttttgcttataatagt 233  Q
    ||||||||||||||||||| |||||  |||| |||||||||||||||||    
T  28752163 tatcatttaatgaatgaatgtaaaaaattaa-tttttgcttataatagt 28752210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 38940224 - 38940268
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaat 175  Q
    |||||| ||||||||||||||||| |||||||  |||||||||||    
T  38940224 cggtcattattataagcaaaaattgacattttagattcattcaat 38940268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 12218501 - 12218448
Alignment:
Q  185 tatcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgg 239  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||| |||||    
T  12218501 tatcatttaatgaatgaatataaaatgttga-tttttgcttataatagtaatcgg 12218448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 26527275 - 26527328
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  26527275 atcatttaatgaatgaatctaaaatgttaa-tttttgcttataatagtgaacgga 26527328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 11637174 - 11637223
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  11637174 cggtcactattataagcaaaacattacattttaaattcattcaattaatg 11637223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 13506836 - 13506887
Alignment:
Q  129 ttcggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||||| ||||||| || |||||||| ||||||||    
T  13506836 ttcggtcactattataagcaaaagtttacatcttaaattcatttaattaatg 13506887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 18886364 - 18886315
Alignment:
Q  185 tatcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    ||||||||||||||||||| |||||| |||| |||||||||||||||||||    
T  18886364 tatcatttaatgaatgaatctaaaatattaa-tttttgcttataatagtga 18886315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 32254906 - 32254959
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| |||||| ||||  |||||||||||||||||||||||    
T  32254906 atcatttaatgaatgaatctaaaatattaa-cttttgcttataatagtgatcgga 32254959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 8449712 - 8449663
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||||||||| | |||||  ||||||||||||||||    
T  8449712 cggtcactattataagcaaaaattaatattttagattcattcaattaatg 8449663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 8458516 - 8458467
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||||||||| | |||||  ||||||||||||||||    
T  8458516 cggtcactattataagcaaaaattaatattttagattcattcaattaatg 8458467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 247
Target Start/End: Complemental strand, 12104800 - 12104740
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgta 247  Q
    |||||||||| ||||||| ||||||||| |||||| |||||||||||||| |||||| ||||    
T  12104800 atcatttaataaatgaatttaaaatgttgattttt-gcttataatagtgaccggaagatgta 12104740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 13281538 - 13281587
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||||| || |||||  ||||||||||||||||    
T  13281538 cggtcactattataagcaaaaatctagattttagattcattcaattaatg 13281587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 31398362 - 31398313
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||| ||||||||||  ||||||||| ||||||    
T  31398362 cggtcactattataagcaaaagtttacattttagattcattcatttaatg 31398313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 34379820 - 34379868
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||||||| ||||||||| | |||||||||||||||||||    
T  34379820 atcatttaatgaatgaatctaaaatgttga-tttttgcttataatagtga 34379868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 8146034 - 8146096
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtata 249  Q
    |||||| ||||||||||| |||||||| ||||||||||||||| |||||| |||| | ||||||    
T  8146034 atcattaaatgaatgaatctaaaatgt-aattttttgcttatattagtgaccggagggtgtata 8146096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 11745979 - 11745932
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagt 233  Q
    |||||||||||||||||| |||||| || || ||||||||||||||||    
T  11745979 atcatttaatgaatgaatctaaaatattgatattttgcttataatagt 11745932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 172
Target Start/End: Original strand, 12383591 - 12383634
Alignment:
Q  129 ttcggtcactattataagcaaaaatttacattttgaattcattc 172  Q
    |||| ||||||||||||| ||||||||||||||| |||||||||    
T  12383591 ttcgttcactattataagtaaaaatttacattttaaattcattc 12383634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 3199848 - 3199806
Alignment:
Q  137 ctattataagcaaaaatttacattttgaattcattcaattaat 179  Q
    |||||||||||||||| |||||||||  |||||||||||||||    
T  3199848 ctattataagcaaaaacttacattttatattcattcaattaat 3199806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 6560742 - 6560795
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||| ||||||||||| |||||||| ||||||||||||||| |||||| ||||    
T  6560742 atcattaaatgaatgaatctaaaatgt-aattttttgcttatattagtgaccgga 6560795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 29072153 - 29072206
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||| || |||||| ||||||||||| ||||||||| ||||||||||||||    
T  29072153 atcatttattgtatgaatttaaaatgttaa-tttttgcttttaatagtgatcgga 29072206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 29104726 - 29104779
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||| || |||||| ||||||||||| ||||||||| ||||||||||||||    
T  29104726 atcatttattgtatgaatttaaaatgttaa-tttttgcttttaatagtgatcgga 29104779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 29418941 - 29418987
Alignment:
Q  134 tcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||| |||||||||  ||| ||||||||||||    
T  29418941 tcactattataagcaaaaaattacattttacattaattcaattaatg 29418987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 30916961 - 30917007
Alignment:
Q  134 tcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||| |||||||||  ||| ||||||||||||    
T  30916961 tcactattataagcaaaaaattacattttacatttattcaattaatg 30917007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 31536448 - 31536402
Alignment:
Q  133 gtcactattataagcaaaaatttacattttgaattcattcaattaat 179  Q
    ||||||| ||||||||||||||||| |||| ||| ||||||||||||    
T  31536448 gtcactaatataagcaaaaatttactttttaaatacattcaattaat 31536402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 6560793 - 6560744
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||| |||||||||||| |||||||||  ||||||||| ||||||    
T  6560793 cggtcactaatataagcaaaaaattacattttagattcattcatttaatg 6560744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 6894818 - 6894867
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||| ||||||||||||||||  ||||||| ||| ||||    
T  6894818 cggtcactattataaacaaaaatttacattttagattcatttaatgaatg 6894867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 8146085 - 8146036
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||| |||||||||||| |||||||||  ||||||||| ||||||    
T  8146085 cggtcactaatataagcaaaaaattacattttagattcattcatttaatg 8146036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 12383725 - 12383676
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||| ||||||| ||||||||  ||| ||||||||||||    
T  12383725 cggtcactattataaacaaaaatctacattttagattaattcaattaatg 12383676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 12383920 - 12383875
Alignment:
Q  134 tcactattataagcaaaaatttacattttgaattcattcaattaat 179  Q
    |||||||||||||||||||| ||||||||  | |||||||||||||    
T  12383920 tcactattataagcaaaaatctacattttagactcattcaattaat 12383875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 18097064 - 18097113
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||| ||||||||||  ||||||| | ||||||    
T  18097064 cggtcactattataagcaaaagtttacattttagattcatttatttaatg 18097113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 30917000 - 30916956
Alignment:
Q  195 tgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    ||||| ||| |||||||| |||||||||||||||||||||||||||    
T  30917000 tgaataaatgtaaaatgt-aattttttgcttataatagtgatcgga 30916956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 34170133 - 34170085
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||||||| ||||||||| | |||||| ||||||||||||    
T  34170133 atcatttaatgaatgaatctaaaatgttga-tttttgtttataatagtga 34170085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 11746363 - 11746315
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||| ||||||  |||||||||||||||  ||||||||||||||||    
T  11746363 ggtcactgttataaaaaaaaatttacattttagattcattcaattaatg 11746315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 12104749 - 12104789
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcatt 171  Q
    |||||||||||||||||||||||  ||||||| ||||||||    
T  12104749 cggtcactattataagcaaaaatcaacattttaaattcatt 12104789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 249
Target Start/End: Complemental strand, 14031724 - 14031663
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtata 249  Q
    ||||||| |||||||||| ||| ||||||  ||||||||||||||||||| |||| | ||||||    
T  14031724 atcattttatgaatgaatctaagatgtta--tttttgcttataatagtgaccggatgatgtata 14031663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 28555082 - 28555034
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||||||| ||||||||  ||||||| | ||||||    
T  28555082 ggtcactattataagcaaaaatctacattttagattcatttatttaatg 28555034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 33689233 - 33689281
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaat 179  Q
    |||||||||||||||||||||||  | |||||  |||||||||||||||    
T  33689233 cggtcactattataagcaaaaatcaatattttatattcattcaattaat 33689281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 11726580 - 11726628
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  11726580 atcatttaatgaatgaatctaaaatgttaa-tttttgcttataatagtga 11726628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 15119832 - 15119784
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  15119832 atcatttaatgaatgaatctaaaatgttaat-ttttgcttataatagtga 15119784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 32143542 - 32143493
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||| |||||||||||| |||||||||| |||||||||||||||||    
T  32143542 cggtcactgttataagcaaaactttacattttaaattcattcaattaatg 32143493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 41805278 - 41805327
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||| ||| |||||| |||||||||||||||||    
T  41805278 cggtcactattataagcaaaattttgcattttaaattcattcaattaatg 41805327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 19210823 - 19210867
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaatt 176  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||    
T  19210823 ggtcactattataagcaaaaatttacattttaaattcatttaatt 19210867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 7079426 - 7079372
Alignment:
Q  185 tatcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||| |||||| ||||||||| |||||| |||||||||||||||||||    
T  7079426 tatcatttaatggatgaatttaaaatgttgattttt-gcttataatagtgatcgga 7079372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 37182901 - 37182954
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| ||||||| ||| ||||||| ||||||||||||||||    
T  37182901 atcatttaatgaatgaatttaaaatg-taaatttttgcgtataatagtgatcgga 37182954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 42530581 - 42530630
Alignment:
Q  190 tttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  42530581 tttaatgaatgaatgtaaaatgttaa-tttttgcttataatagtgaccgga 42530630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 1961394 - 1961442
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||||||| ||||||||| | |||||||||||||||||||    
T  1961394 atcatttaatgaatgaatctaaaatgttga-tttttgcttataatagtga 1961442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 26234160 - 26234111
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||| ||||||||||  ||||||||| ||||||    
T  26234160 cggtcactattataagcaaaagtttacattttagattcattcatttaatg 26234111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 27331895 - 27331846
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||||||||  |||||||  ||||||||||||||||    
T  27331895 cggtcactattataagcaaaaatcaacattttagattcattcaattaatg 27331846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 31024226 - 31024178
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||||||| ||||||||| | |||||||||||||||||||    
T  31024226 atcatttaatgaatgaatctaaaatgttga-tttttgcttataatagtga 31024178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 38618529 - 38618484
Alignment:
Q  133 gtcactattataagcaaaaatttacattttgaattcattcaattaa 178  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||    
T  38618529 gtcactattataaggaaaaatttacattttacattcattcaattaa 38618484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 13304546 - 13304594
Alignment:
Q  185 tatcatttaatgaatgaatataaaatgttaattttttgcttataatagt 233  Q
    ||||||||||| ||| ||| |||| ||||||||||||||||||||||||    
T  13304546 tatcatttaataaataaatttaaactgttaattttttgcttataatagt 13304594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 173
Target Start/End: Original strand, 15119779 - 15119823
Alignment:
Q  129 ttcggtcactattataagcaaaaatttacattttgaattcattca 173  Q
    |||||||||||||||||||||||||| |||||||  |||||||||    
T  15119779 ttcggtcactattataagcaaaaattaacattttagattcattca 15119823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 32143410 - 32143450
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcatt 171  Q
    ||||||||||||||||||||| |||||||||| ||||||||    
T  32143410 cggtcactattataagcaaaactttacattttaaattcatt 32143450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 32630407 - 32630459
Alignment:
Q  128 tttcggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||| |||| |||||||| ||||||| ||||||||| ||||||||||||||||    
T  32630407 tttcagtcattattataaacaaaaatctacattttggattcattcaattaatg 32630459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 42530496 - 42530544
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaat 179  Q
    |||||||||||||||| |||||||||||||||  ||||||| |||||||    
T  42530496 cggtcactattataagtaaaaatttacattttagattcatttaattaat 42530544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 3121558 - 3121511
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaa 178  Q
    ||||||||||||||||||||||| ||||||||  || |||||||||||    
T  3121558 cggtcactattataagcaaaaatctacattttagatccattcaattaa 3121511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 8740525 - 8740572
Alignment:
Q  133 gtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||| ||||||||  ||||||||| ||||||    
T  8740525 gtcactattataagcaaaaatctacattttagattcattcatttaatg 8740572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 13994275 - 13994327
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| ||||||||||   |||||||||||||||||| ||||    
T  13994275 atcatttaatgaatgaatctaaaatgtta--gttttgcttataatagtgaccgga 13994327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 21183412 - 21183474
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtata 249  Q
    |||||||||||||||||| ||||||||| | ||||||||||||| ||||| |||| | ||||||    
T  21183412 atcatttaatgaatgaatctaaaatgttga-tttttgcttataacagtgaccggaggatgtata 21183474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 26003569 - 26003522
Alignment:
Q  133 gtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||| |||||||||||||| ||||||||  ||||||||||||||||    
T  26003569 gtcacttttataagcaaaaatctacattttagattcattcaattaatg 26003522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 173
Target Start/End: Complemental strand, 37182949 - 37182910
Alignment:
Q  134 tcactattataagcaaaaatttacattttgaattcattca 173  Q
    ||||||||||| ||||||||||||||||| ||||||||||    
T  37182949 tcactattatacgcaaaaatttacattttaaattcattca 37182910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 38465923 - 38465876
Alignment:
Q  133 gtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||| ||||||||||| ||||||||  ||||||||||||||||    
T  38465923 gtcactattgtaagcaaaaatctacattttagattcattcaattaatg 38465876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 45472412 - 45472463
Alignment:
Q  129 ttcggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||| ||||||||||||| |||||||||| |||| |||||||||||| ||||    
T  45472412 ttcgatcactattataagtaaaaatttactttttaaattcattcaataaatg 45472463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 3098211 - 3098264
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| ||||||| ||  ||||||||||||||||||| ||||    
T  3098211 atcatttaatgaatgaatctaaaatg-tagatttttgcttataatagtgaccgga 3098264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 3098262 - 3098220
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattca 173  Q
    ||||||||||||||||||||||| ||||||||  |||||||||    
T  3098262 cggtcactattataagcaaaaatctacattttagattcattca 3098220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 8510590 - 8510643
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    ||||||||||||||||||  |||||||| | ||||||||||||||||||| ||||    
T  8510590 atcatttaatgaatgaatccaaaatgtt-agtttttgcttataatagtgaccgga 8510643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 8510641 - 8510599
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattca 173  Q
    |||||||||||||||||||||| | |||||||| |||||||||    
T  8510641 cggtcactattataagcaaaaactaacattttggattcattca 8510599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 180
Target Start/End: Original strand, 10996257 - 10996299
Alignment:
Q  138 tattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||    
T  10996257 tattataagcaaaaatttatattttaaattcattgaattaatg 10996299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 25270941 - 25270994
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| ||||||| ||  ||||||||||||||||||| ||||    
T  25270941 atcatttaatgaatgaatctaaaatg-tagatttttgcttataatagtgaccgga 25270994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 25270992 - 25270950
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattca 173  Q
    ||||||||||||||||||||||| ||||||||  |||||||||    
T  25270992 cggtcactattataagcaaaaatctacattttagattcattca 25270950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 38465844 - 38465791
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||| ||| ||||||||| | ||||||||||||||||||| ||||    
T  38465844 atcatttaatgaattaatctaaaatgttga-tttttgcttataatagtgaccgga 38465791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 41057024 - 41056982
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattca 173  Q
    ||||||||||||||||||||||| ||||||||  |||||||||    
T  41057024 cggtcactattataagcaaaaatctacattttagattcattca 41056982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 42530628 - 42530586
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattca 173  Q
    |||||||||||||||||||||||| |||||||  |||||||||    
T  42530628 cggtcactattataagcaaaaattaacattttacattcattca 42530586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 180
Target Start/End: Original strand, 43732149 - 43732191
Alignment:
Q  138 tattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||| ||||||||  ||||||||||||||||    
T  43732149 tattataagcaaaaatatacattttagattcattcaattaatg 43732191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 10602430 - 10602381
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||| |||||| |||| ||| | |||||||||||||||    
T  10602430 cggtcactattataagaaaaaatatacaatttaagttcattcaattaatg 10602381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 13882768 - 13882816
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||||||| ||||||||| | |||||| ||||||||||||    
T  13882768 atcatttaatgaatgaatctaaaatgtt-agtttttgtttataatagtga 13882816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 14022893 - 14022941
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||||||| ||||||||| | |||||| ||||||||||||    
T  14022893 atcatttaatgaatgaatctaaaatgtt-agtttttgattataatagtga 14022941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 15119913 - 15119864
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||||| ||||||||  ||| ||||| ||||||    
T  15119913 cggtcactattataagcaaaaatctacattttagatttattcatttaatg 15119864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 250
Target Start/End: Complemental strand, 15859603 - 15859543
Alignment:
Q  189 atttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtataa 250  Q
    ||||||||||||||| | || |||| ||||||  |||||||||||||||||||| |||||||    
T  15859603 atttaatgaatgaatttgaattgttgattttta-cttataatagtgatcggaaggtgtataa 15859543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 32460747 - 32460776
Alignment:
Q  133 gtcactattataagcaaaaatttacatttt 162  Q
    ||||||||||||||||||||||||||||||    
T  32460747 gtcactattataagcaaaaatttacatttt 32460776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 38181896 - 38181847
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||| |||||||||||||||||  ||||||||  ||||||||||||||||    
T  38181896 cggttactattataagcaaaaaactacattttacattcattcaattaatg 38181847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 41056973 - 41057021
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||||||| ||||||| ||  |||||||||||||||||||    
T  41056973 atcatttaatgaatgaatctaaaatg-tagatttttgcttataatagtga 41057021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 162
Target Start/End: Original strand, 1961316 - 1961344
Alignment:
Q  134 tcactattataagcaaaaatttacatttt 162  Q
    |||||||||||||||||||||||||||||    
T  1961316 tcactattataagcaaaaatttacatttt 1961344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 11726629 - 11726589
Alignment:
Q  133 gtcactattataagcaaaaatttacattttgaattcattca 173  Q
    |||||||||||||||||||||| |||||||  |||||||||    
T  11726629 gtcactattataagcaaaaattaacattttagattcattca 11726589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 13333532 - 13333587
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaag 242  Q
    |||||||||| ||||||| ||||||||  ||||| ||||||||||||||| ||||||    
T  13333532 atcatttaatcaatgaatctaaaatgtagatttt-tgcttataatagtgaccggaag 13333587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 13333583 - 13333543
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcatt 171  Q
    ||||||||||||||||||||||| ||||||||  |||||||    
T  13333583 cggtcactattataagcaaaaatctacattttagattcatt 13333543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 15446783 - 15446827
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaat 175  Q
    |||||||||||||||||||||||| |  |||| ||||||||||||    
T  15446783 cggtcactattataagcaaaaattcattttttaaattcattcaat 15446827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 15859686 - 15859638
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||| |||||||||||||||| || |||||  ||||||||||||||||    
T  15859686 ggtcattattataagcaaaaatctatattttagattcattcaattaatg 15859638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 38581003 - 38581055
Alignment:
Q  127 atttcggtcactattataagcaaaaatttacattttgaattcattcaattaat 179  Q
    |||||||||| ||||||||| |||||| || |||||  |||||||||||||||    
T  38581003 atttcggtcattattataagtaaaaatctatattttatattcattcaattaat 38581055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000007; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 33684178 - 33684134
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaatt 176  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||    
T  33684178 ggtcactattataagcaaaaatttacattttaaattcatttaatt 33684134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 4297282 - 4297336
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaa 241  Q
    |||||||||| ||||||||||||||||| | |||||| ||||||||||||||||||    
T  4297282 atcatttaattaatgaatataaaatgttga-tttttgtttataatagtgatcggaa 4297336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 28518723 - 28518770
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaattaat 179  Q
    ||||||||||||||||||||||  |||||||| |||||||||||||||    
T  28518723 ggtcactattataagcaaaaatcaacattttggattcattcaattaat 28518770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 3100460 - 3100411
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgat 236  Q
    |||||||| ||||||||| |||||||||||| |||||||||||||||||||    
T  3100460 atcatttattgaatgaatctaaaatgttaat-ttttgcttataatagtgat 3100411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 71263 - 71312
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||||| || |||||  ||||||||||||||||    
T  71263 cggtcactattataagcaaaaatctatattttagattcattcaattaatg 71312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 3100545 - 3100492
Alignment:
Q  127 atttcggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||| |||||||||||||  ||||||||||||||  ||||||||||||||||    
T  3100545 atttcgatcactattataagtgaaaatttacattttagattcattcaattaatg 3100492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 13654644 - 13654595
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||||||||| || |||| |||||||||||| ||||    
T  13654644 cggtcactattataagcaaaaattcactttttaaattcattcaataaatg 13654595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 26045269 - 26045318
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||| ||||||||||||||||||||| |||||  ||||||||||||||||    
T  26045269 cggttactattataagcaaaaatttatattttagattcattcaattaatg 26045318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 26141759 - 26141808
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||| ||||||||||  ||||||||| ||||||    
T  26141759 cggtcactattataagcaaaagtttacattttagattcattcatttaatg 26141808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 32911577 - 32911626
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||||||  ||||| ||| |||||||||||||||||||||    
T  32911577 atcatttaatgaatgaacctaaaaagttgattttttgcttataatagtga 32911626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 14772603 - 14772536
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtataatgta 254  Q
    |||||||||||||||||  ||||||||| | ||||||||||||||||||| |||| | ||||| |||||    
T  14772603 atcatttaatgaatgaacctaaaatgttga-tttttgcttataatagtgaccggagggtgtatgatgta 14772536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 43438340 - 43438391
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcg 238  Q
    |||||||||||||||||| |||||| |||| |||||| |||||||||||||||    
T  43438340 atcatttaatgaatgaatctaaaatattaa-tttttgtttataatagtgatcg 43438391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 694207 - 694258
Alignment:
Q  128 tttcggtcactattataagcaaaaatttacattttgaattcattcaattaat 179  Q
    |||||||||||||||||| ||||||| || ||||| |||| |||||||||||    
T  694207 tttcggtcactattataaacaaaaatataaattttaaatttattcaattaat 694258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 32398141 - 32398090
Alignment:
Q  129 ttcggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||| |||||||||||| ||||||| || ||||| |||||||||||||||||    
T  32398141 ttcgatcactattataaacaaaaatctatattttaaattcattcaattaatg 32398090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 179
Target Start/End: Complemental strand, 35032397 - 35032358
Alignment:
Q  140 ttataagcaaaaatttacattttgaattcattcaattaat 179  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  35032397 ttataagcaaaaatttacattttagattcattcaattaat 35032358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 3100412 - 3100458
Alignment:
Q  134 tcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||| |||||||  ||||||||||| ||||    
T  3100412 tcactattataagcaaaaattaacattttagattcattcaataaatg 3100458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 251
Target Start/End: Original strand, 10437725 - 10437786
Alignment:
Q  189 atttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtataat 251  Q
    ||||||| ||||||| ||||||||| ||||| ||||||||||||||| |||| | ||||||||    
T  10437725 atttaataaatgaatctaaaatgttgatttt-tgcttataatagtgaccggagggtgtataat 10437786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 248
Target Start/End: Original strand, 18652850 - 18652911
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtat 248  Q
    |||||||||||||||||| ||||||||| | |||||| ||||||||||||  ||| |||||||    
T  18652850 atcatttaatgaatgaatctaaaatgttga-tttttgtttataatagtgactggatgttgtat 18652911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 71345 - 71399
Alignment:
Q  188 catttaatgaatgaat---ataaaatgttaattttttgcttataatagtgatcgga 240  Q
    ||||||||||||||||   |||||||||| ||||| ||||||||||||||||||||    
T  71345 catttaatgaatgaatctaataaaatgttgatttt-tgcttataatagtgatcgga 71399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 5984119 - 5984070
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||| |||||||||||||| ||| ||||||  ||||||||||||||||    
T  5984119 cggtcattattataagcaaaactttgcattttagattcattcaattaatg 5984070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 11795740 - 11795789
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||| |||||||||||||  |||||||  ||||||||||||||||    
T  11795740 cggtcactaatataagcaaaaatcaacattttagattcattcaattaatg 11795789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 14772682 - 14772633
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||| |||| |||||  ||| ||||||||||||    
T  14772682 cggtcactattataagcaaaactttatattttagattaattcaattaatg 14772633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 249
Target Start/End: Complemental strand, 15058875 - 15058817
Alignment:
Q  189 atttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaagttgtata 249  Q
    |||||||| ||| || ||||||||||||||||  |||||||||||||||||| | ||||||    
T  15058875 atttaatggatgtatctaaaatgttaattttt--cttataatagtgatcggagggtgtata 15058817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 18033491 - 18033442
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||||| ||||||||  ||| ||||| ||||||    
T  18033491 cggtcactattataagcaaaaatctacattttagatttattcatttaatg 18033442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 25777040 - 25776991
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||||| ||| |||| | |||||||||| ||||    
T  25777040 cggtcactattataagcaaaaatataccttttaagttcattcaataaatg 25776991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 26300115 - 26300164
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||| ||||||||||||||||| ||||  || |||||||||||||    
T  26300115 cggtcactaatataagcaaaaatttactttttagatacattcaattaatg 26300164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 179
Target Start/End: Complemental strand, 31706088 - 31706047
Alignment:
Q  138 tattataagcaaaaatttacattttgaattcattcaattaat 179  Q
    ||||||||| ||||||||||||||| |||||||| |||||||    
T  31706088 tattataagtaaaaatttacattttaaattcatttaattaat 31706047  T

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Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 33075150 - 33075198
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtga 235  Q
    |||||||||||||||||  |||||| |||| |||||||||||||||||||    
T  33075150 atcatttaatgaatgaacctaaaatattaa-tttttgcttataatagtga 33075198  T

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Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 179
Target Start/End: Original strand, 35729436 - 35729485
Alignment:
Q  130 tcggtcactattataagcaaaaatttacattttgaattcattcaattaat 179  Q
    |||||||| ||||||||||||| ||||||||||  |||| ||||||||||    
T  35729436 tcggtcacaattataagcaaaattttacattttagattcgttcaattaat 35729485  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 41814394 - 41814435
Alignment:
Q  138 tattataagcaaaaatttacattttgaattcattcaattaat 179  Q
    ||||||| |||||||||||||||||  |||||||||||||||    
T  41814394 tattataggcaaaaatttacattttagattcattcaattaat 41814435  T

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Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 11795820 - 11795875
Alignment:
Q  185 tatcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcggaa 241  Q
    |||||||||||||||||||| ||||| || | ||||||||||||||| ||| |||||    
T  11795820 tatcatttaatgaatgaataaaaaatattga-tttttgcttataataatgaccggaa 11795875  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 14153374 - 14153422
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||||||| ||| ||||  ||||||||| ||||||    
T  14153374 ggtcactattataagcaaaaatctactttttatattcattcatttaatg 14153422  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 15549461 - 15549413
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaat 179  Q
    ||||||||||||||| |||||||  |||||||  |||||||||||||||    
T  15549461 cggtcactattataaacaaaaatcaacattttagattcattcaattaat 15549413  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 29177844 - 29177800
Alignment:
Q  134 tcactattataagcaaaaatttacattttgaattcattcaattaa 178  Q
    ||||| |||||| ||||||||||||||||  ||||||||||||||    
T  29177844 tcactgttataaacaaaaatttacattttagattcattcaattaa 29177800  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 33867981 - 33867933
Alignment:
Q  185 tatcatttaatgaatgaatataaaatgttaattttttgcttataatagt 233  Q
    ||||||| | ||||||||||||||||  | |||||||||||||||||||    
T  33867981 tatcattaattgaatgaatataaaataatgattttttgcttataatagt 33867933  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 36897751 - 36897795
Alignment:
Q  136 actattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||| ||||||||||||||| |||||||| ||| ||||    
T  36897751 actattataagtaaaaatttacattttaaattcattaaataaatg 36897795  T

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Target: scaffold0149 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 24691 - 24744
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| |||||| |||| ||||||||||||||||||| ||||    
T  24691 atcatttaatgaatgaatctaaaatattaa-tttttgcttataatagtgaccgga 24744  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 7791 - 7744
Alignment:
Q  133 gtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||||||||||||||| ||||||||  ||||||||| ||||||    
T  7791 gtcactattataagcaaaaatctacattttagattcattcatttaatg 7744  T

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Target: scaffold1476 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1476
Description:

Target: scaffold1476; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 744 - 797
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcgga 240  Q
    |||||||||||||||||| |||||| |||| |||| | |||||||||||||||||    
T  744 atcatttaatgaatgaatctaaaatattaa-ttttagtttataatagtgatcgga 797  T

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Target: scaffold0341 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 2427 - 2473
Alignment:
Q  134 tcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||||||||||| ||  ||||||||| ||||||    
T  2427 tcactattataagcaaaaatttacatcttagattcattcatttaatg 2473  T

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Target: scaffold0341; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 10082 - 10128
Alignment:
Q  134 tcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||||||||||||||||||||| ||  ||||||||| ||||||    
T  10082 tcactattataagcaaaaatttacatcttagattcattcatttaatg 10128  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 120281 - 120232
Alignment:
Q  131 cggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    ||||||||| ||||||||||||||||| ||||  || |||||||||||||    
T  120281 cggtcactaatataagcaaaaatttactttttagatacattcaattaatg 120232  T

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Target: scaffold1640 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1640
Description:

Target: scaffold1640; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 173
Target Start/End: Original strand, 1139 - 1183
Alignment:
Q  129 ttcggtcactattataagcaaaaatttacattttgaattcattca 173  Q
    |||||||||||||||||||||||||  |||||||  |||||||||    
T  1139 ttcggtcactattataagcaaaaatacacattttagattcattca 1183  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 89653 - 89602
Alignment:
Q  186 atcatttaatgaatgaatataaaatgttaattttttgcttataatagtgatcg 238  Q
    ||||||||||||| |||| ||||||||| | ||||||||||||||| ||||||    
T  89653 atcatttaatgaaagaatctaaaatgttga-tttttgcttataataatgatcg 89602  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 246800 - 246848
Alignment:
Q  132 ggtcactattataagcaaaaatttacattttgaattcattcaattaatg 180  Q
    |||||||| ||||||||||||||||| ||||  || |||||||||||||    
T  246800 ggtcactaatataagcaaaaatttactttttagatacattcaattaatg 246848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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