View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7463_high_24 (Length: 236)
Name: NF7463_high_24
Description: NF7463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7463_high_24 |
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Alignment Details
Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 17 - 201
Target Start/End: Complemental strand, 34069703 - 34069519
Alignment:
| Q |
17 |
aagtttgtgcagaagcgcatgcatattgcacttgattttactgttgtattgtatttgaatacttttgttgtataatttataaaggttgaatttgtcgaaa |
116 |
Q |
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| T |
34069703 |
aagtttgtgcagaagcgcatgcatattgcacttgattttactgttgtattgtatttgaatacttttgttgtataatttataaaggttgaatttgtcgaaa |
34069604 |
T |
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| Q |
117 |
agcaaccaagataaagatggtgagtctgaaatactcttctcatggaagccatactattaaaaattcttgaactggaaagtgaccc |
201 |
Q |
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| T |
34069603 |
agcaaccaagataaagatggtgagtctgaaatactcttctcatggaagccatactattaaaaattcttgaactggaaagtgaccc |
34069519 |
T |
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