View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7464_low_10 (Length: 251)
Name: NF7464_low_10
Description: NF7464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7464_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 33943580 - 33943814
Alignment:
| Q |
1 |
gaacaataaaacccatcttgaaacatatcatat-----gccactaattagaagtgtttgttgtgcattttgaactgtgtttaaagcaaaaaagaacatca |
95 |
Q |
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| T |
33943580 |
gaacaataaaacccatcttgaaacatatcatattatatgccactaattagaagtgtttgttgtgcattttgaactgtgtttaaagcaaaaaagaacatca |
33943679 |
T |
|
| Q |
96 |
tctccaaatataaaattatacgcggtttggtttgatgtagatgacatgtttnnnnnnnttgaaatgatattaacactcctaccaccaatcaagtgtgaag |
195 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
33943680 |
tctccaaatataaaattatacgcggtttggtttgatgtagatgacacgtttaaaaaaattgaaatgatattaacactcctaccaccaatcaagtgtgaag |
33943779 |
T |
|
| Q |
196 |
tctcagttttgaaagaatatttgtgaattcttgtc |
230 |
Q |
| |
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||||||||||||||||||||||||||||||||||| |
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| T |
33943780 |
tctcagttttgaaagaatatttgtgaattcttgtc |
33943814 |
T |
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