View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7465_high_6 (Length: 334)
Name: NF7465_high_6
Description: NF7465
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7465_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 18 - 317
Target Start/End: Original strand, 46920418 - 46920715
Alignment:
| Q |
18 |
aaaaggatgtcctattataatcacccatactgaaaccaacaattttgatactacatgtatcaaaagtaaaaataattataaagaccagaatatataactt |
117 |
Q |
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| T |
46920418 |
aaaaggatgtcctattataatcacccaaactgaaaccaacaattttgatactacatgtatcaaaagtaaaaataattataaagaccagaatatataactt |
46920517 |
T |
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| Q |
118 |
ctgtgtttttctaggnnnnnnn-tattgaagctaaaatactatgtgaagtgacatataggtcaaacaattaataatattttcctcaacaatttaaaccca |
216 |
Q |
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| T |
46920518 |
ctgtgtttttctaggaaaaaaaatattgaagctaaaatactatgtgaagtgacatataggtcaaacaattaat---attttcctcaacaatttaaaccca |
46920614 |
T |
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| Q |
217 |
ttttattcatagcaaatatttatagatttaatagaattaatttggttaaaaagataatagaattaatggtgcttttcaacccaagaacacttgaatcata |
316 |
Q |
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| T |
46920615 |
ttttattcatagcaaatatttatagatttaatagaattaatttggttaaaaagataatagaattaatggtgcttttcaacccaagaacacttgaatcata |
46920714 |
T |
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