View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7466_low_7 (Length: 240)
Name: NF7466_low_7
Description: NF7466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7466_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 35098448 - 35098668
Alignment:
| Q |
1 |
ccaatttttccttcaagttcactggagtattgattcttttgcaatccttcataatttcccttgtgtatttcatttggcatattaagactcatttgttatc |
100 |
Q |
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| T |
35098448 |
ccaatttttccttcaagttcactggagtattgattcttttgcaatccttcataatttcccttgtgtatttcatttggcatattaagactcatttgttatc |
35098547 |
T |
|
| Q |
101 |
ttgcctaacttccattcctagacaacgtggtcatcacactgagctctatgatctcaaatgcttggagcagtaaatcatgaataatgctaggattctgatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35098548 |
ttgcctaacttccattcctagacaacgtggtcatcacactgagctctatgatctcagatgcttggagcagtaaatcatgaataatgctaggattctgatt |
35098647 |
T |
|
| Q |
201 |
gatcttattttttaggatgat |
221 |
Q |
| |
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|||||||||||| |||||||| |
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| T |
35098648 |
gatcttatttttgaggatgat |
35098668 |
T |
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