View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7467_high_7 (Length: 251)
Name: NF7467_high_7
Description: NF7467
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7467_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 54592485 - 54592712
Alignment:
| Q |
1 |
gttgttttctttaatcacttctgctgtaaaatttccaatcaagctacaagttaacnnnnnnnaaataacctccaagtaagttgatctttataaatataag |
100 |
Q |
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| T |
54592485 |
gttgttttctttaatcacttctgctgtaaaatttccgatcaagctacaagttaactttttttaaataacctccaagtaagttgatctttataaatataag |
54592584 |
T |
|
| Q |
101 |
tttcaccttaatattaaaaagatctatggttatgttgtatattaattcagataactagagaaagtcacatcccatgaatttccaacatgaggaaatatag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
54592585 |
tttcaccttaatattaaaaagatctatggttatgttgtatattaattcagataactagagaaagtcacatcccatgaatttccaacatgaggaaatatag |
54592684 |
T |
|
| Q |
201 |
cagctagctatcagggaggccttccaaa |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
54592685 |
cagctagctatcagggaggccttccaaa |
54592712 |
T |
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