View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7467_low_4 (Length: 291)
Name: NF7467_low_4
Description: NF7467
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7467_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 274
Target Start/End: Original strand, 33656839 - 33657112
Alignment:
| Q |
1 |
aaatagatgtgtgaaattcctccatgtttaccacaaggaagtttaattaagagcaatgatgaacgaaataaaggccgagacaccagtatgattatgagat |
100 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
33656839 |
aaatagatgtgtgaaattcctccacgtttaccacaaggaagtttaattaagagcaatgatgaacgaaataaaggcagagacaccagtatgattatgagat |
33656938 |
T |
|
| Q |
101 |
cccatccataccttctgcttcatttgatcgacttgaaccttcaatctgcacaatctccttttctatggtcacaaacctctctataacttctggagtgctt |
200 |
Q |
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||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33656939 |
cccgtccataccttctgcttcatttgattgacttgaaccttcaatctgcacaatctccttttctatggtcacaaacctctctataacttctggagtgctt |
33657038 |
T |
|
| Q |
201 |
acaaatctaacaaacctatgtaaacaaaccaaaacaaacacacatcactagtcttatagtattaatccattttt |
274 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
33657039 |
acaaatctaacaaacctatgtaaacaaaccaaaacaaacacacatcactagtcttatagtattaatctattttt |
33657112 |
T |
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