View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7469_high_11 (Length: 288)

Name: NF7469_high_11
Description: NF7469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7469_high_11
NF7469_high_11
[»] chr5 (29 HSPs)
chr5 (29-222)||(34828399-34828592)
chr5 (53-221)||(22509769-22509934)
chr5 (53-221)||(24669642-24669807)
chr5 (53-221)||(24739411-24739576)
chr5 (53-221)||(24752180-24752345)
chr5 (102-221)||(30344812-30344929)
chr5 (50-221)||(22759817-22759982)
chr5 (55-221)||(19075370-19075530)
chr5 (50-223)||(6728869-6729036)
chr5 (84-222)||(758896-759030)
chr5 (90-174)||(22008538-22008619)
chr5 (96-221)||(22879942-22880062)
chr5 (112-222)||(21676231-21676341)
chr5 (96-174)||(43120132-43120207)
chr5 (96-222)||(43123619-43123740)
chr5 (96-221)||(43244402-43244520)
chr5 (55-221)||(31253648-31253808)
chr5 (84-158)||(21661813-21661884)
chr5 (50-174)||(22233251-22233369)
chr5 (96-174)||(33474550-33474625)
chr5 (91-174)||(1858240-1858321)
chr5 (51-222)||(28260543-28260706)
chr5 (50-174)||(29326329-29326447)
chr5 (50-171)||(22237815-22237930)
chr5 (112-174)||(23433523-23433584)
chr5 (112-174)||(23444888-23444949)
chr5 (112-158)||(25013077-25013122)
chr5 (89-161)||(23077002-23077071)
chr5 (112-160)||(27636296-27636344)
[»] chr6 (42 HSPs)
chr6 (28-221)||(31249667-31249860)
chr6 (53-223)||(1592181-1592349)
chr6 (28-222)||(15463432-15463628)
chr6 (53-222)||(5295224-5295390)
chr6 (28-221)||(15456838-15457033)
chr6 (93-223)||(21717569-21717697)
chr6 (93-223)||(21725405-21725533)
chr6 (84-221)||(22906364-22906499)
chr6 (89-221)||(22905720-22905850)
chr6 (84-221)||(19726004-19726142)
chr6 (53-129)||(5290820-5290895)
chr6 (49-174)||(14616878-14616997)
chr6 (50-222)||(14595282-14595448)
chr6 (49-158)||(22757723-22757826)
chr6 (50-174)||(2707818-2707936)
chr6 (44-222)||(19439101-19439272)
chr6 (50-222)||(24514444-24514610)
chr6 (55-221)||(28707340-28707500)
chr6 (96-158)||(8761087-8761147)
chr6 (50-174)||(23236012-23236130)
chr6 (119-222)||(19301337-19301439)
chr6 (96-154)||(8768824-8768880)
chr6 (112-158)||(9623394-9623440)
chr6 (112-174)||(19473009-19473070)
chr6 (89-221)||(21794125-21794252)
chr6 (91-174)||(24561644-24561725)
chr6 (112-159)||(14996628-14996675)
chr6 (89-221)||(19448684-19448813)
chr6 (89-221)||(19450678-19450807)
chr6 (142-175)||(14582567-14582600)
chr6 (89-161)||(26419393-26419462)
chr6 (50-174)||(7428775-7428892)
chr6 (50-174)||(14723819-14723939)
chr6 (112-159)||(24412980-24413026)
chr6 (89-155)||(12166697-12166760)
chr6 (112-158)||(18316705-18316750)
chr6 (112-174)||(19589250-19589312)
chr6 (112-158)||(22799201-22799246)
chr6 (114-175)||(25346480-25346540)
chr6 (114-159)||(25749132-25749176)
chr6 (89-171)||(19457115-19457194)
chr6 (89-171)||(19467260-19467339)
[»] chr3 (60 HSPs)
chr3 (29-222)||(22163117-22163310)
chr3 (53-221)||(20187027-20187192)
chr3 (53-221)||(11851344-11851509)
chr3 (48-221)||(13435099-13435269)
chr3 (51-196)||(14542195-14542336)
chr3 (51-222)||(14292098-14292268)
chr3 (222-288)||(9021761-9021827)
chr3 (50-221)||(2249651-2249812)
chr3 (98-222)||(11957317-11957441)
chr3 (53-174)||(16830619-16830739)
chr3 (112-222)||(13303935-13304046)
chr3 (112-222)||(13314611-13314722)
chr3 (50-174)||(2270876-2270993)
chr3 (84-221)||(14653357-14653492)
chr3 (112-201)||(13325526-13325616)
chr3 (50-174)||(54900727-54900844)
chr3 (50-222)||(14648884-14649046)
chr3 (55-222)||(45221400-45221561)
chr3 (50-174)||(11965510-11965629)
chr3 (112-174)||(15518485-15518548)
chr3 (89-174)||(17495565-17495647)
chr3 (112-221)||(24124007-24124116)
chr3 (96-221)||(40474-40594)
chr3 (112-174)||(18757707-18757768)
chr3 (89-176)||(12356656-12356739)
chr3 (53-174)||(16839118-16839240)
chr3 (96-221)||(5840647-5840769)
chr3 (89-174)||(11306426-11306508)
chr3 (97-158)||(18719759-18719817)
chr3 (89-221)||(29550241-29550370)
chr3 (112-174)||(54972241-54972303)
chr3 (112-174)||(54974851-54974913)
chr3 (112-174)||(54977461-54977523)
chr3 (91-174)||(8584028-8584109)
chr3 (91-174)||(13969535-13969616)
chr3 (91-174)||(13975014-13975095)
chr3 (91-174)||(14012833-14012914)
chr3 (91-174)||(14089294-14089375)
chr3 (91-174)||(49398834-49398915)
chr3 (112-221)||(18136996-18137102)
chr3 (89-174)||(18957192-18957274)
chr3 (112-222)||(31691334-31691445)
chr3 (112-222)||(31942772-31942883)
chr3 (89-155)||(49162602-49162665)
chr3 (112-222)||(18130500-18130607)
chr3 (112-175)||(15935691-15935753)
chr3 (112-175)||(15937541-15937603)
chr3 (89-135)||(17199680-17199724)
chr3 (183-222)||(17706554-17706593)
chr3 (112-174)||(11888747-11888808)
chr3 (112-174)||(12148165-12148226)
chr3 (112-174)||(12152291-12152352)
chr3 (89-174)||(12418764-12418845)
chr3 (112-158)||(13037615-13037660)
chr3 (112-158)||(13043980-13044025)
chr3 (112-174)||(14544885-14544947)
chr3 (91-174)||(14083893-14083974)
chr3 (114-175)||(46724129-46724189)
chr3 (112-174)||(17244362-17244426)
chr3 (183-223)||(24191166-24191206)
[»] chr2 (46 HSPs)
chr2 (29-222)||(26883525-26883718)
chr2 (29-220)||(27211590-27211781)
chr2 (84-222)||(23296910-23297052)
chr2 (96-223)||(22809287-22809410)
chr2 (96-222)||(24503594-24503715)
chr2 (96-221)||(6031565-6031685)
chr2 (96-221)||(31754851-31754971)
chr2 (112-222)||(19715480-19715590)
chr2 (112-222)||(19720043-19720153)
chr2 (112-221)||(19791947-19792056)
chr2 (55-174)||(25036712-25036825)
chr2 (55-174)||(25040819-25040932)
chr2 (112-221)||(43692712-43692821)
chr2 (55-174)||(23029654-23029767)
chr2 (226-283)||(1644668-1644725)
chr2 (96-174)||(20964660-20964735)
chr2 (112-174)||(23061934-23061997)
chr2 (84-219)||(23290325-23290464)
chr2 (89-163)||(25590823-25590894)
chr2 (55-222)||(8688167-8688328)
chr2 (221-283)||(17673394-17673456)
chr2 (112-174)||(19655090-19655152)
chr2 (225-283)||(24578684-24578742)
chr2 (91-174)||(200003-200084)
chr2 (91-174)||(6745058-6745139)
chr2 (91-174)||(17967006-17967087)
chr2 (50-174)||(24651773-24651890)
chr2 (112-164)||(21906691-21906743)
chr2 (237-288)||(3563601-3563652)
chr2 (112-174)||(23263415-23263477)
chr2 (112-174)||(23268631-23268693)
chr2 (112-221)||(27368280-27368389)
chr2 (221-283)||(17628323-17628385)
chr2 (112-174)||(22797346-22797408)
chr2 (50-157)||(25108089-25108189)
chr2 (112-221)||(28972032-28972141)
chr2 (87-174)||(36799928-36800010)
chr2 (112-174)||(19795946-19796008)
chr2 (36-66)||(19715406-19715436)
chr2 (36-66)||(19719969-19719999)
chr2 (36-66)||(19791873-19791903)
chr2 (112-174)||(22859734-22859795)
chr2 (36-66)||(24942949-24942979)
chr2 (112-174)||(25266740-25266801)
chr2 (222-288)||(37081308-37081374)
chr2 (112-173)||(24644235-24644295)
[»] chr4 (48 HSPs)
chr4 (29-220)||(27904627-27904818)
chr4 (29-221)||(27898063-27898255)
chr4 (53-222)||(23725420-23725586)
chr4 (84-221)||(11171891-11172026)
chr4 (49-222)||(17000779-17000948)
chr4 (39-221)||(26078312-26078488)
chr4 (96-223)||(14479862-14479982)
chr4 (96-221)||(4169877-4169997)
chr4 (144-222)||(16750270-16750347)
chr4 (96-221)||(55503814-55503934)
chr4 (98-221)||(30395470-30395593)
chr4 (89-174)||(12931283-12931366)
chr4 (50-158)||(14062376-14062479)
chr4 (96-221)||(31132425-31132545)
chr4 (84-158)||(2585813-2585884)
chr4 (50-174)||(41529691-41529809)
chr4 (112-174)||(14697645-14697707)
chr4 (84-222)||(23120993-23121134)
chr4 (112-174)||(38982704-38982766)
chr4 (50-158)||(16220695-16220797)
chr4 (51-222)||(20894272-20894433)
chr4 (55-219)||(42598358-42598516)
chr4 (51-221)||(20888654-20888814)
chr4 (222-283)||(6136160-6136221)
chr4 (91-174)||(10687495-10687575)
chr4 (91-174)||(10901135-10901215)
chr4 (98-174)||(898975-899050)
chr4 (112-174)||(13451516-13451578)
chr4 (112-174)||(18260722-18260783)
chr4 (112-174)||(18270685-18270746)
chr4 (114-175)||(22726588-22726648)
chr4 (98-158)||(33198344-33198401)
chr4 (55-221)||(37839629-37839789)
chr4 (99-171)||(37880776-37880844)
chr4 (113-158)||(40908055-40908100)
chr4 (96-155)||(41940003-41940059)
chr4 (112-154)||(14484972-14485013)
chr4 (112-158)||(14992310-14992355)
chr4 (112-158)||(15005657-15005702)
chr4 (112-158)||(16484052-16484097)
chr4 (112-174)||(18170386-18170447)
chr4 (112-158)||(30237192-30237237)
chr4 (89-174)||(33096411-33096491)
chr4 (89-174)||(46045559-46045641)
chr4 (222-283)||(2946718-2946779)
chr4 (106-163)||(16151934-16151991)
chr4 (106-163)||(16156080-16156137)
chr4 (49-174)||(15406347-15406466)
[»] scaffold1405 (1 HSPs)
scaffold1405 (29-221)||(1504-1699)
[»] scaffold0609 (1 HSPs)
scaffold0609 (28-222)||(458-654)
[»] scaffold0001 (3 HSPs)
scaffold0001 (29-221)||(494569-494766)
scaffold0001 (113-158)||(95307-95352)
scaffold0001 (112-174)||(452424-452485)
[»] chr7 (50 HSPs)
chr7 (29-221)||(14321177-14321369)
chr7 (53-222)||(15338235-15338401)
chr7 (28-221)||(31153741-31153935)
chr7 (53-223)||(15723817-15723985)
chr7 (53-222)||(15711592-15711758)
chr7 (49-158)||(6411284-6411388)
chr7 (49-221)||(35963349-35963517)
chr7 (50-223)||(10305321-10305488)
chr7 (50-222)||(10306040-10306206)
chr7 (49-174)||(36306720-36306840)
chr7 (55-223)||(11395316-11395478)
chr7 (96-221)||(125258-125378)
chr7 (84-223)||(3290426-3290561)
chr7 (96-221)||(16952966-16953087)
chr7 (50-174)||(46349370-46349487)
chr7 (112-174)||(3327169-3327231)
chr7 (112-174)||(15086733-15086794)
chr7 (96-221)||(21744434-21744554)
chr7 (56-174)||(16185044-16185156)
chr7 (112-219)||(16946379-16946485)
chr7 (50-221)||(20907991-20908163)
chr7 (146-221)||(1612017-1612091)
chr7 (96-222)||(38827090-38827209)
chr7 (112-174)||(18959178-18959239)
chr7 (112-222)||(10308669-10308775)
chr7 (96-158)||(8775236-8775295)
chr7 (96-174)||(21232690-21232765)
chr7 (91-174)||(4279325-4279406)
chr7 (91-174)||(19615657-19615738)
chr7 (112-174)||(15438294-15438356)
chr7 (89-174)||(26295454-26295535)
chr7 (112-174)||(32770786-32770848)
chr7 (112-174)||(37245055-37245115)
chr7 (114-175)||(11308393-11308453)
chr7 (114-175)||(11311701-11311761)
chr7 (114-175)||(12684703-12684763)
chr7 (50-158)||(4988322-4988425)
chr7 (112-174)||(12546608-12546670)
chr7 (89-174)||(16188409-16188491)
chr7 (112-174)||(4021-4082)
chr7 (112-174)||(11882201-11882262)
chr7 (112-158)||(12694046-12694091)
chr7 (112-158)||(15098636-15098681)
chr7 (89-155)||(16928296-16928359)
chr7 (112-158)||(46624305-46624350)
chr7 (106-155)||(13005758-13005806)
chr7 (185-222)||(14145891-14145928)
chr7 (50-158)||(4992420-4992523)
chr7 (96-158)||(14946476-14946535)
chr7 (96-158)||(15374069-15374128)
[»] scaffold0034 (4 HSPs)
scaffold0034 (29-222)||(71642-71835)
scaffold0034 (103-221)||(50377-50495)
scaffold0034 (112-174)||(18209-18271)
scaffold0034 (89-174)||(7322-7404)
[»] scaffold0453 (1 HSPs)
scaffold0453 (29-221)||(11981-12173)
[»] scaffold0720 (1 HSPs)
scaffold0720 (29-222)||(4780-4972)
[»] scaffold0220 (1 HSPs)
scaffold0220 (28-221)||(9755-9944)
[»] scaffold0003 (2 HSPs)
scaffold0003 (58-222)||(194501-194662)
scaffold0003 (50-154)||(136843-136941)
[»] scaffold0249 (2 HSPs)
scaffold0249 (28-221)||(15406-15603)
scaffold0249 (112-174)||(8403-8466)
[»] scaffold0023 (3 HSPs)
scaffold0023 (84-221)||(21093-21228)
scaffold0023 (50-128)||(131865-131943)
scaffold0023 (149-209)||(1830-1890)
[»] chr1 (42 HSPs)
chr1 (60-221)||(3707371-3707528)
chr1 (51-221)||(20241932-20242098)
chr1 (49-222)||(23067314-23067484)
chr1 (49-221)||(955654-955822)
chr1 (50-222)||(19858560-19858725)
chr1 (50-174)||(23196196-23196314)
chr1 (50-222)||(2341630-2341796)
chr1 (50-158)||(29555053-29555155)
chr1 (50-222)||(20032610-20032772)
chr1 (112-174)||(20639704-20639766)
chr1 (49-221)||(22448867-22449036)
chr1 (50-174)||(19852473-19852590)
chr1 (50-158)||(20838777-20838879)
chr1 (112-174)||(20942536-20942599)
chr1 (50-221)||(20824958-20825123)
chr1 (89-174)||(47483539-47483621)
chr1 (112-174)||(16884220-16884283)
chr1 (119-221)||(19960544-19960645)
chr1 (112-221)||(21541275-21541384)
chr1 (55-174)||(11944522-11944635)
chr1 (55-158)||(43631430-43631527)
chr1 (114-175)||(11810455-11810515)
chr1 (84-223)||(21663553-21663688)
chr1 (91-174)||(42096637-42096718)
chr1 (115-174)||(11156390-11156450)
chr1 (119-174)||(29240471-29240526)
chr1 (50-174)||(45306214-45306332)
chr1 (222-288)||(28538559-28538625)
chr1 (113-174)||(21729629-21729690)
chr1 (226-282)||(2900467-2900523)
chr1 (50-222)||(19667353-19667516)
chr1 (89-161)||(24076771-24076841)
chr1 (237-288)||(27908354-27908405)
chr1 (112-158)||(11141689-11141734)
chr1 (112-158)||(21697584-21697629)
chr1 (112-174)||(24109729-24109789)
chr1 (112-158)||(31928095-31928140)
chr1 (50-115)||(20707363-20707428)
chr1 (112-174)||(18710143-18710207)
chr1 (114-158)||(21738039-21738082)
chr1 (114-158)||(21746442-21746485)
chr1 (112-156)||(23630404-23630447)
[»] scaffold0326 (4 HSPs)
scaffold0326 (53-221)||(16863-17028)
scaffold0326 (53-170)||(1043-1158)
scaffold0326 (89-174)||(7966-8047)
scaffold0326 (89-174)||(15868-15949)
[»] chr8 (48 HSPs)
chr8 (51-222)||(22064201-22064367)
chr8 (36-224)||(21668256-21668438)
chr8 (96-222)||(22176551-22176674)
chr8 (119-223)||(29644268-29644370)
chr8 (97-221)||(6609371-6609490)
chr8 (141-222)||(22026676-22026756)
chr8 (49-174)||(21281433-21281553)
chr8 (112-174)||(5239453-5239514)
chr8 (96-221)||(7302271-7302391)
chr8 (112-221)||(27889248-27889357)
chr8 (112-221)||(27947906-27948015)
chr8 (96-221)||(28852831-28852951)
chr8 (96-221)||(45136055-45136175)
chr8 (89-174)||(21300830-21300912)
chr8 (50-174)||(34949610-34949730)
chr8 (96-174)||(21322909-21322984)
chr8 (54-158)||(21327458-21327556)
chr8 (112-221)||(23824391-23824500)
chr8 (50-154)||(44430844-44430942)
chr8 (50-174)||(44494658-44494776)
chr8 (113-175)||(20984527-20984590)
chr8 (112-174)||(31419416-31419476)
chr8 (91-174)||(30767684-30767765)
chr8 (96-158)||(22248480-22248539)
chr8 (96-158)||(36601089-36601148)
chr8 (112-174)||(1263635-1263697)
chr8 (112-174)||(31412977-31413037)
chr8 (112-164)||(19988871-19988924)
chr8 (84-174)||(20840571-20840657)
chr8 (50-115)||(23373882-23373947)
chr8 (114-175)||(39362881-39362941)
chr8 (96-174)||(11773681-11773756)
chr8 (89-158)||(18609588-18609653)
chr8 (228-288)||(19442444-19442504)
chr8 (228-288)||(19578595-19578655)
chr8 (112-174)||(22011804-22011865)
chr8 (144-222)||(22055169-22055247)
chr8 (112-164)||(25110307-25110359)
chr8 (50-158)||(8415546-8415648)
chr8 (96-158)||(22989027-22989086)
chr8 (112-158)||(19852941-19852986)
chr8 (112-158)||(19858977-19859022)
chr8 (112-158)||(20005801-20005846)
chr8 (112-158)||(25625448-25625493)
chr8 (89-158)||(36446409-36446475)
chr8 (98-158)||(29327480-29327537)
chr8 (112-174)||(21968501-21968562)
chr8 (112-174)||(21986260-21986321)
[»] scaffold0348 (3 HSPs)
scaffold0348 (50-221)||(13281-13454)
scaffold0348 (51-227)||(11177-11351)
scaffold0348 (84-222)||(16105-16243)
[»] scaffold0025 (2 HSPs)
scaffold0025 (36-221)||(70486-70668)
scaffold0025 (183-221)||(16190-16228)
[»] scaffold0074 (1 HSPs)
scaffold0074 (50-174)||(16388-16507)
[»] scaffold0213 (1 HSPs)
scaffold0213 (84-221)||(6572-6709)
[»] scaffold0072 (1 HSPs)
scaffold0072 (50-174)||(55362-55480)
[»] scaffold0063 (1 HSPs)
scaffold0063 (84-221)||(13407-13544)
[»] scaffold0026 (2 HSPs)
scaffold0026 (50-174)||(125083-125203)
scaffold0026 (114-159)||(117487-117531)
[»] scaffold0512 (1 HSPs)
scaffold0512 (96-221)||(11972-12092)
[»] scaffold0011 (5 HSPs)
scaffold0011 (50-221)||(251279-251443)
scaffold0011 (112-174)||(198119-198182)
scaffold0011 (59-174)||(257945-258054)
scaffold0011 (91-174)||(175295-175376)
scaffold0011 (112-174)||(146450-146511)
[»] scaffold0679 (1 HSPs)
scaffold0679 (55-221)||(3731-3891)
[»] scaffold0114 (2 HSPs)
scaffold0114 (84-221)||(25646-25782)
scaffold0114 (92-222)||(41328-41457)
[»] scaffold0058 (3 HSPs)
scaffold0058 (112-221)||(33819-33926)
scaffold0058 (58-174)||(23437-23547)
scaffold0058 (96-174)||(15933-16008)
[»] scaffold0141 (1 HSPs)
scaffold0141 (96-221)||(32041-32161)
[»] scaffold0098 (2 HSPs)
scaffold0098 (50-221)||(33533-33698)
scaffold0098 (121-222)||(26729-26830)
[»] scaffold0077 (2 HSPs)
scaffold0077 (112-222)||(18844-18951)
scaffold0077 (112-222)||(24471-24577)
[»] scaffold0049 (1 HSPs)
scaffold0049 (96-221)||(82651-82771)
[»] scaffold0192 (1 HSPs)
scaffold0192 (88-222)||(5988-6120)
[»] scaffold0190 (2 HSPs)
scaffold0190 (98-174)||(28045-28120)
scaffold0190 (89-174)||(21198-21281)
[»] scaffold0149 (1 HSPs)
scaffold0149 (84-222)||(39078-39218)
[»] scaffold0109 (1 HSPs)
scaffold0109 (50-223)||(1265-1432)
[»] scaffold0342 (1 HSPs)
scaffold0342 (96-174)||(17534-17613)
[»] scaffold0298 (1 HSPs)
scaffold0298 (112-174)||(1332-1395)
[»] scaffold1615 (1 HSPs)
scaffold1615 (112-222)||(1086-1196)
[»] scaffold0516 (1 HSPs)
scaffold0516 (55-158)||(8268-8365)
[»] scaffold0188 (1 HSPs)
scaffold0188 (112-174)||(32297-32359)
[»] scaffold0071 (1 HSPs)
scaffold0071 (84-221)||(51612-51749)
[»] scaffold0574 (1 HSPs)
scaffold0574 (50-174)||(6515-6633)
[»] scaffold0461 (2 HSPs)
scaffold0461 (112-174)||(1763-1826)
scaffold0461 (112-174)||(8699-8762)
[»] scaffold0139 (1 HSPs)
scaffold0139 (112-174)||(16729-16792)
[»] scaffold0120 (1 HSPs)
scaffold0120 (84-153)||(5810-5876)
[»] scaffold0031 (1 HSPs)
scaffold0031 (112-174)||(74859-74922)
[»] scaffold0235 (2 HSPs)
scaffold0235 (112-222)||(7394-7504)
scaffold0235 (112-222)||(17608-17718)
[»] scaffold0102 (1 HSPs)
scaffold0102 (112-174)||(29228-29289)
[»] scaffold1488 (1 HSPs)
scaffold1488 (91-174)||(77-158)
[»] scaffold1340 (1 HSPs)
scaffold1340 (96-155)||(1859-1915)
[»] scaffold0708 (1 HSPs)
scaffold0708 (91-174)||(166-247)
[»] scaffold0610 (1 HSPs)
scaffold0610 (89-174)||(4956-5038)
[»] scaffold0301 (1 HSPs)
scaffold0301 (98-174)||(14070-14144)
[»] scaffold0243 (2 HSPs)
scaffold0243 (50-174)||(8644-8762)
scaffold0243 (50-174)||(23135-23253)
[»] scaffold0203 (2 HSPs)
scaffold0203 (50-174)||(17708-17826)
scaffold0203 (50-174)||(2952-3071)
[»] scaffold0076 (2 HSPs)
scaffold0076 (91-174)||(30879-30960)
scaffold0076 (91-174)||(36280-36361)
[»] scaffold0060 (1 HSPs)
scaffold0060 (98-174)||(40662-40736)
[»] scaffold0050 (1 HSPs)
scaffold0050 (91-174)||(87172-87253)
[»] scaffold0037 (2 HSPs)
scaffold0037 (55-221)||(37204-37364)
scaffold0037 (89-153)||(102368-102431)
[»] scaffold0010 (1 HSPs)
scaffold0010 (50-174)||(38205-38322)
[»] scaffold2175 (1 HSPs)
scaffold2175 (107-163)||(317-372)
[»] scaffold0004 (4 HSPs)
scaffold0004 (112-164)||(115178-115229)
scaffold0004 (96-174)||(320513-320588)
scaffold0004 (115-174)||(326222-326281)
scaffold0004 (112-174)||(130380-130441)
[»] scaffold1061 (1 HSPs)
scaffold1061 (112-174)||(718-780)
[»] scaffold0947 (1 HSPs)
scaffold0947 (89-158)||(471-537)
[»] scaffold0664 (1 HSPs)
scaffold0664 (116-175)||(7915-7974)
[»] scaffold0546 (1 HSPs)
scaffold0546 (112-223)||(10425-10536)
[»] scaffold0126 (1 HSPs)
scaffold0126 (116-222)||(37797-37903)
[»] scaffold0104 (3 HSPs)
scaffold0104 (112-221)||(19986-20095)
scaffold0104 (112-221)||(22806-22915)
scaffold0104 (112-222)||(25307-25415)
[»] scaffold0742 (1 HSPs)
scaffold0742 (144-221)||(3055-3134)
[»] scaffold0316 (1 HSPs)
scaffold0316 (108-174)||(210-276)
[»] scaffold0211 (1 HSPs)
scaffold0211 (112-174)||(8763-8824)
[»] scaffold0154 (1 HSPs)
scaffold0154 (112-174)||(29185-29247)
[»] scaffold0081 (1 HSPs)
scaffold0081 (112-174)||(56613-56674)
[»] scaffold0028 (3 HSPs)
scaffold0028 (112-174)||(64369-64430)
scaffold0028 (91-174)||(47716-47797)
scaffold0028 (91-174)||(53122-53203)
[»] scaffold0007 (1 HSPs)
scaffold0007 (112-174)||(208246-208307)
[»] scaffold0407 (1 HSPs)
scaffold0407 (91-158)||(5017-5081)
[»] scaffold0244 (2 HSPs)
scaffold0244 (112-161)||(8966-9014)
scaffold0244 (112-161)||(20084-20132)
[»] scaffold0138 (1 HSPs)
scaffold0138 (109-174)||(385-450)
[»] scaffold0106 (1 HSPs)
scaffold0106 (95-174)||(37763-37840)
[»] scaffold0323 (1 HSPs)
scaffold0323 (52-174)||(6703-6820)
[»] scaffold0167 (1 HSPs)
scaffold0167 (89-155)||(6388-6451)
[»] scaffold0020 (1 HSPs)
scaffold0020 (115-174)||(103612-103672)
[»] scaffold0019 (1 HSPs)
scaffold0019 (89-161)||(143340-143409)
[»] scaffold0016 (1 HSPs)
scaffold0016 (112-174)||(173717-173778)
[»] scaffold0355 (1 HSPs)
scaffold0355 (112-174)||(2201-2264)
[»] scaffold0113 (1 HSPs)
scaffold0113 (50-158)||(27397-27498)
[»] scaffold0054 (1 HSPs)
scaffold0054 (112-159)||(62470-62516)
[»] scaffold0053 (1 HSPs)
scaffold0053 (112-159)||(61701-61747)
[»] scaffold0706 (1 HSPs)
scaffold0706 (36-66)||(3919-3949)
[»] scaffold0661 (1 HSPs)
scaffold0661 (112-158)||(4778-4823)
[»] scaffold0511 (1 HSPs)
scaffold0511 (112-158)||(689-734)
[»] scaffold0395 (1 HSPs)
scaffold0395 (112-158)||(4781-4826)
[»] scaffold0377 (1 HSPs)
scaffold0377 (89-135)||(6744-6789)
[»] scaffold0085 (1 HSPs)
scaffold0085 (50-159)||(16992-17104)
[»] scaffold0078 (1 HSPs)
scaffold0078 (112-158)||(18111-18156)
[»] scaffold0039 (1 HSPs)
scaffold0039 (109-159)||(4407-4456)
[»] scaffold0503 (1 HSPs)
scaffold0503 (113-158)||(3155-3199)
[»] scaffold0367 (1 HSPs)
scaffold0367 (50-174)||(7891-8008)
[»] scaffold0002 (1 HSPs)
scaffold0002 (50-174)||(369862-369979)
[»] scaffold1684 (1 HSPs)
scaffold1684 (49-174)||(923-1042)
[»] scaffold0222 (1 HSPs)
scaffold0222 (112-174)||(22080-22144)


Alignment Details
Target: chr5 (Bit Score: 166; Significance: 7e-89; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 34828592 - 34828399
Alignment:
Q  29 ttggagtttatttaagttgaaaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaa 128  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  34828592 ttggagtttatttaagttgaaaaatattccgctgcaagtttaatgatggttttgtgaagaatgtttaattaaatagatttttatatattctatttaataa 34828493  T
Q  129 attttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  34828492 attttgatgatgtagtgtgacatgcccgtttgggttttactctgattgttgaaatattattatttaattgattttgggaaacggggtgttacaa 34828399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 22509769 - 22509934
Alignment:
Q  53 tattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatg 152  Q
    |||| |||||||||||||| ||||| ||| | ||| ||||||||||||||||||||||||||||||||||||||||| |||||   ||||||||||||||    
T  22509769 tatttcgctgcaagtttaatgatgaattttg-aaggatgtttaattaaatagatttttatatattctatttaagaaa-tttgaaattgtagtgtgacatg 22509866  T
Q  153 cccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    ||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  22509867 cccgttggggttttactctga-tgttgaaaaattattatttaattgattttgggaaacggggtgttaca 22509934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 24669642 - 24669807
Alignment:
Q  53 tattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatg 152  Q
    ||||||||||||||||||| ||||| ||| | ||| ||||||||||||||||||||||||||||||||||||||||| |||||   ||||||||||||||    
T  24669642 tattccgctgcaagtttaatgatgaattttg-aaggatgtttaattaaatagatttttatatattctatttaagaaa-tttgaaattgtagtgtgacatg 24669739  T
Q  153 cccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    |||||| |||||||||||||| |||||||  ||||||||||||| | ||||||||||||| ||||||||    
T  24669740 cccgtttgggttttactctga-tgttgaacaattattatttaattggttttgggaaacggggtgttaca 24669807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 24739411 - 24739576
Alignment:
Q  53 tattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatg 152  Q
    ||||||||||||||||||| ||||| ||| | ||| ||||||||||||||||||||||||||||||||||||||||| |||||   ||||||||||||||    
T  24739411 tattccgctgcaagtttaatgatgaattttg-aaggatgtttaattaaatagatttttatatattctatttaagaaa-tttgaaattgtagtgtgacatg 24739508  T
Q  153 cccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    |||||| |||||||||||||| |||||||  ||||||||||||| | ||||||||||||| ||||||||    
T  24739509 cccgtttgggttttactctga-tgttgaacaattattatttaattggttttgggaaacggggtgttaca 24739576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 24752180 - 24752345
Alignment:
Q  53 tattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatg 152  Q
    ||||||||||||||||||| ||||| ||| | ||| ||||||||||||||||||||||||||||||||||||||||| |||||   ||||||||||||||    
T  24752180 tattccgctgcaagtttaatgatgaattttg-aaggatgtttaattaaatagatttttatatattctatttaagaaa-tttgaaattgtagtgtgacatg 24752277  T
Q  153 cccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    |||||| |||||||||||||| |||||||  ||||||||||||| | ||||||||||||| ||||||||    
T  24752278 cccgtttgggttttactctga-tgttgaacaattattatttaattggttttgggaaacggggtgttaca 24752345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 102 - 221
Target Start/End: Original strand, 30344812 - 30344929
Alignment:
Q  102 tagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggatt 201  Q
    ||||||||||||||||||||||||||||||| ||   |||||||||||||||||||| |||||||||||||| |||||||  ||||||||||||| ||||    
T  30344812 tagatttttatatattctatttaagaaattt-gaaattgtagtgtgacatgcccgtttgggttttactctga-tgttgaacaattattatttaattgatt 30344909  T
Q  202 ttgggaaacggtgtgttaca 221  Q
    ||||||||||| ||||||||    
T  30344910 ttgggaaacggggtgttaca 30344929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 221
Target Start/End: Original strand, 22759817 - 22759982
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||| |||||||||||  |||| ||||||||||  ||| ||||||| |||||||||||||   |||||||||||||||||||||||  ||||||||||||    
T  22759817 aaattttccgctgcaaaattaatgatgattttg--aaggatgttta-ttaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgac 22759910  T
Q  150 atgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    ||||||||| |||  ||||||||||   ||     |||||||| ||| ||||||||||||||| ||||||||    
T  22759911 atgcccgtttgggaattactctgatgcatgtttatttattattaaattgattttgggaaacggggtgttaca 22759982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 221
Target Start/End: Complemental strand, 19075530 - 19075370
Alignment:
Q  55 ttccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcc 154  Q
    |||||||||||  |||| ||||||||||  ||| ||| ||| |||||||||||||   ||||||||||||||||| |||||  |||||||||||||||||    
T  19075530 ttccgctgcaaaattaatgatgattttg--aaggatgctta-ttaaatagatttt---atattctatttaagaaaatttgaaaatgtagtgtgacatgcc 19075437  T
Q  155 cgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    |||| |||  ||||||||||   ||    ||||||| ||||| ||||||||||||||| ||||||||    
T  19075436 cgtttgggaattactctgatgcatgtttaattattaattaattgattttgggaaacggggtgttaca 19075370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 50 - 223
Target Start/End: Original strand, 6728869 - 6729036
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||| |||||||||||  |||| ||||||||||  ||| ||||||| |||||||||||||   ||||||||||||| |||||||||  ||||||||||||    
T  6728869 aaattttccgctgcaaaattaatgatgattttg--aaggatgttta-ttaaatagatttt---atattctatttaataaattttgaaaatgtagtgtgac 6728962  T
Q  150 atgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaaa 223  Q
    ||| ||||| |||  ||||||||||   ||    ||||||||| ||| ||||||||| ||||| ||||||||||    
T  6728963 atgtccgtttgggaattactctgatgcatgtttaattattattaaattgattttgggtaacggggtgttacaaa 6729036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 222
Target Start/End: Original strand, 758896 - 759030
Alignment:
Q  84 gaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccg--ttggggttttactctgattgttgaa 181  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||| |||||   ||||||||||||||||||  || ||| |||||||||| ||||       
T  758896 gaaggatgtttaattaaatagatttttatatattttatttaagaaa-tttgaaattgtagtgtgacatgcccgtttttgggatttactctga-tgtt--- 758990  T
Q  182 atattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    || |||||||| ||| |||||||| |||||| |||||||||    
T  758991 at-ttattattaaattgattttggaaaacggggtgttacaa 759030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 90 - 174
Target Start/End: Original strand, 22008538 - 22008619
Alignment:
Q  90 tgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||||||   |||||||||||||||||||||||    ||||||||||||||||||| ||| |||||||||||    
T  22008538 tgtttaattaaatagatttt---atattctatttaagaaattttgaattagtagtgtgacatgcccgtttgggatttactctgat 22008619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 22880062 - 22879942
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaa 195  Q
    ||||||||||||||   |||||||||||||||||||||||  ||||||||||||||||||||| |||  ||||||||||   |||   ||||||| ||||    
T  22880062 attaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatga---attattaattaa 22879969  T
Q  196 tgga-ttttgggaaacggtgtgttaca 221  Q
    | || ||||||||||||| ||||||||    
T  22879968 ttgatttttgggaaacggggtgttaca 22879942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 21676231 - 21676341
Alignment:
Q  112 tatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaat-attattatttaatggattttgggaaa 209  Q
    ||||||||||||||||||  |||||  ||||||||||||||||||||| |||||||||||||| ||||||| | |||||||||||||   ||||||| ||    
T  21676231 tatattctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtt-gggttttactctga-tgttgaattaattattatttaattacttttgggtaa 21676328  T
Q  210 cggtgtgttacaa 222  Q
    ||| |||||||||    
T  21676329 cggggtgttacaa 21676341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 174
Target Start/End: Complemental strand, 43120207 - 43120132
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||   |||||||||||||||||||||||  ||||||||||||||||||||| |||  ||||||||||    
T  43120207 attaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgat 43120132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 222
Target Start/End: Complemental strand, 43123740 - 43123619
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaa 195  Q
    ||||||||||||||   |||||||||||||||||||||||   |||||||||||||||||||| |||  ||||||||||   |||   ||||||| ||||    
T  43123740 attaaatagatttt---atattctatttaagaaattttgaaattgtagtgtgacatgcccgtttgggaattactctgatgcatga---attattaattaa 43123647  T
Q  196 tgga-ttttgggaaacggtgtgttacaa 222  Q
    | || ||||||||||||| |||||||||    
T  43123646 ttgatttttgggaaacggggtgttacaa 43123619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 43244402 - 43244520
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaa 195  Q
    ||||||||||||||   ||||||||||||| |||||||||  ||||||||||||||||||||| |||  |||||||||    || |   |||||| ||||    
T  43244402 attaaatagatttt---atattctatttaacaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctga----tgcatgtttattaattaa 43244494  T
Q  196 tggattttgggaaacggtgtgttaca 221  Q
    | ||||||||||||||| ||||||||    
T  43244495 ttgattttgggaaacggggtgttaca 43244520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 55 - 221
Target Start/End: Original strand, 31253648 - 31253808
Alignment:
Q  55 ttccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcc 154  Q
    |||||||||||  |||| ||||||||||  ||| ||| ||| |||||||||||||   ||||||||||||||||| |||||  ||| |||||||||||||    
T  31253648 ttccgctgcaaaattaatgatgattttg--aaggatgctta-ttaaatagatttt---atattctatttaagaaaatttgaaaatggagtgtgacatgcc 31253741  T
Q  155 cgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    |||| |||  ||||||||||   ||     |||||| ||||| ||||||||||||||| ||||||||    
T  31253742 cgtttgggaattactctgatgcatgtttatttattaattaattgattttgggaaacggggtgttaca 31253808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 21661884 - 21661813
Alignment:
Q  84 gaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    |||| |||||||||||||||| ||||   ||||||||||||||||| |||||  |||||||||||||||||||||    
T  21661884 gaaggatgtttaattaaatagttttt---atattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtt 21661813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 22233251 - 22233369
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    ||||||||||||||||  |||| |||| |||   |||| |||||||||||||||| ||||   ||||||||||||||||| |||||    ||||||||||    
T  22233251 aaatattccgctgcaaaattaatgatgtttt---gaaggatgtttaattaaatagttttt---atattctatttaagaaaatttgaattagtagtgtgac 22233344  T
Q  150 atgcccgttggggttttactctgat 174  Q
    |||| |||| ||| |||||||||||    
T  22233345 atgctcgtttgggatttactctgat 22233369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 174
Target Start/End: Original strand, 33474550 - 33474625
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||   |||||||||||||||||| ||||  ||||||||||||||||||||| |||  ||||||||||    
T  33474550 attaaatagatttt---atattctatttaagaaatcttgaaaatgtagtgtgacatgcccgtttgggaattactctgat 33474625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 1858240 - 1858321
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||  |||||||| ||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||    
T  1858240 gtttaattaaatag--ttttatat-ttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 1858321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 222
Target Start/End: Original strand, 28260543 - 28260706
Alignment:
Q  51 aatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgaca 150  Q
    |||| ||||||||||||||||||||| |||   |||   |||||||||||||||    ||| |||| ||||||||||||||||||  |||||||||  ||    
T  28260543 aataatccgctgcaagtttaacgatgtttt---gaaagttgtttaattaaatag----ttacatatgctatttaagaaattttga-aatgtagtgtagca 28260634  T
Q  151 tgcccgttggggttttactctgattgttgaaat-attattatttaatggattttgggaaacggtgtgttacaa 222  Q
    |||||||| |||||  ||||||| ||||||| | |||| ||||||||   ||||||| ||||| |||||||||    
T  28260635 tgcccgtttgggttgaactctga-tgttgaattaattagtatttaattacttttgggtaacggggtgttacaa 28260706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 29326329 - 29326447
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||| ||||||||||| ||||| ||||| ||||  ||| | ||||| |||||| ||||||   |||||||||||||||||||||||  ||| ||||||||    
T  29326329 aaattttccgctgcaaatttaatgatgactttg--aaggacgttta-ttaaattgatttt---atattctatttaagaaattttgaaaatgaagtgtgac 29326422  T
Q  150 atgcccgttggggttttactctgat 174  Q
    || |||||| |||  ||||||||||    
T  29326423 atacccgtttgggaattactctgat 29326447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 171
Target Start/End: Original strand, 22237815 - 22237930
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    ||||||||||||||||  |||| |||| |||   |||| ||| |||||||||||| ||||   ||||||||||||||||| |||||    ||||||||||    
T  22237815 aaatattccgctgcaaaattaatgatgtttt---gaaggatggttaattaaatagttttt---atattctatttaagaaaatttgaattagtagtgtgac 22237908  T
Q  150 atgcccgttggggttttactct 171  Q
    |||| |||| ||| ||||||||    
T  22237909 atgctcgtttgggatttactct 22237930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 23433523 - 23433584
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||||||||| |  | ||||||||||||||||||| ||| | |||||||||    
T  23433523 tatattctatttaagaaattttaaaaa-gtagtgtgacatgcccgtttgggatatactctgat 23433584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 23444888 - 23444949
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||||||||| |  | ||||||||||||||||||| ||| | |||||||||    
T  23444888 tatattctatttaagaaattttaaaaa-gtagtgtgacatgcccgtttgggatatactctgat 23444949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Complemental strand, 25013122 - 25013077
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  25013122 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 25013077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 23077002 - 23077071
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgat-gtagtgtgacatgcccgttggg 161  Q
    |||||||||||||||| |||    ||||||||||||||| ||||||   || ||||||||||||||||||||||    
T  23077002 atgtttaattaaatagtttt----atattctatttaagagattttggaaatagtagtgtgacatgcccgttggg 23077071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 27636296 - 27636344
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttgg 160  Q
    |||| |||||||||||||||||||    |||||||||||||||||||||    
T  27636296 tataatctatttaagaaattttgaaatagtagtgtgacatgcccgttgg 27636344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 162; Significance: 2e-86; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 31249860 - 31249667
Alignment:
Q  28 gttggagtttatttaagttgaaaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaaga 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||  || |||||||||||||||||||||||||||||||||||||||||    
T  31249860 gttggagtttatttaagttgaaaaatattccgctgcaagtttaacgatgtttttatgatgaatgtttaattaaatagatttttatatattctatttaaga 31249761  T
Q  128 aattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||| ||||||||    
T  31249760 aattttgatgatgtagtgtgacatgcccgttggggttttactctgaatgttgaaatatgattatttaattgattttgggaaacggggtgttaca 31249667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 53 - 223
Target Start/End: Complemental strand, 1592349 - 1592181
Alignment:
Q  53 tattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatg 152  Q
    ||||||||||||||||||| ||||| ||| | ||| |||||||||||||||||||||||||| |||||||||||||||||  |   ||||||||||||||    
T  1592349 tattccgctgcaagtttaatgatgaattttg-aaggatgtttaattaaatagatttttatatgttctatttaagaaatttgaaaattgtagtgtgacatg 1592251  T
Q  153 cccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaaa 223  Q
    ||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||  ||||||||||    
T  1592250 cccgttggggttttactctga-tgttgaaaaattattatttaattgattttgggaaacgtggtgttacaaa 1592181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 28 - 222
Target Start/End: Complemental strand, 15463628 - 15463432
Alignment:
Q  28 gttggagtttatttaagttgaaaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagattttt-atatattctatttaag 126  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| || |||   || ||||| ||| | |||||||||||| ||||||||||||||||    
T  15463628 gttggagtttatttaagttgaaaaatattccgctgcaagattaacgttg-tttaatgatgaatgattactcaaatagattttttatatattctatttaag 15463530  T
Q  127 aaattttgatgatgtagtgtgacatgcccgttggggttttactctga--ttgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    | |||||||||| ||| ||||||||||||||||||||||||||||||  |||||||||||| ||  ||||   ||||||||||||||| |||||||||    
T  15463529 agattttgatgacgtaatgtgacatgcccgttggggttttactctgattttgttgaaatataatattttatatgattttgggaaacggggtgttacaa 15463432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 53 - 222
Target Start/End: Original strand, 5295224 - 5295390
Alignment:
Q  53 tattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatg 152  Q
    ||||||||||||||||||| ||||| ||| | ||| ||||||||||||||||||||||||||||||||||||||||| |||||   ||||||||||||||    
T  5295224 tattccgctgcaagtttaatgatgaattttg-aaggatgtttaattaaatagatttttatatattctatttaagaaa-tttgaaattgtagtgtgacatg 5295321  T
Q  153 cccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    |||||| | |||||||||||| |||||||  ||||||||||||| ||||||||||||||| |||||||||    
T  5295322 cccgtttgagttttactctga-tgttgaacaattattatttaattgattttgggaaacggggtgttacaa 5295390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 15457033 - 15456838
Alignment:
Q  28 gttggagtttatttaagttgaaaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagattttt-atatattctatttaag 126  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| || |||   || ||||| ||| | |||||||||||| ||||||||||||||||    
T  15457033 gttggagtttatttaagttgaaaaatattccgctgcaagattaacgttg-tttaatgatgaatgattactcaaatagattttttatatattctatttaag 15456935  T
Q  127 aaattttgatgatgtagtgtgacatgcccgttggggttttactctga--ttgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    | |||||||||| ||| ||||||||||||||||||||||||||||||  |||||||||||| ||  ||||   ||||||||||||||| ||||||||    
T  15456934 agattttgatgacgtaatgtgacatgcccgttggggttttactctgattttgttgaaatataatattttatatgattttgggaaacggggtgttaca 15456838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 93 - 223
Target Start/End: Original strand, 21717569 - 21717697
Alignment:
Q  93 ttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatt 192  Q
    |||||||||||||||||||||| |||||||||||||| || ||   |||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  21717569 ttaattaaatagatttttatatgttctatttaagaaaatt-gaaattgtagtgtgacatgcccgttggggttttactctgat-gttgaaaaattattatt 21717666  T
Q  193 taatggattttgggaaacggtgtgttacaaa 223  Q
    |||| ||||||||||||||| ||||||||||    
T  21717667 taattgattttgggaaacggggtgttacaaa 21717697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 93 - 223
Target Start/End: Original strand, 21725405 - 21725533
Alignment:
Q  93 ttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatt 192  Q
    |||||||||||||||||||||| |||||||||||||| || ||   |||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  21725405 ttaattaaatagatttttatatgttctatttaagaaaatt-gaaattgtagtgtgacatgcccgttggggttttactctgat-gttgaaaaattattatt 21725502  T
Q  193 taatggattttgggaaacggtgtgttacaaa 223  Q
    |||| ||||||||||||||| ||||||||||    
T  21725503 taattgattttgggaaacggggtgttacaaa 21725533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 221
Target Start/End: Complemental strand, 22906499 - 22906364
Alignment:
Q  84 gaagaatgtttaattaaatagatttttatatattctatttaa-gaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaa 182  Q
    |||| ||||||||||||||||||||||||||  ||||||||| |  |||||||  ||||  ||||||||||||||| || |||||||||||| ||||||     
T  22906499 gaaggatgtttaattaaatagatttttatat--tctatttaaagtgattttgaaaatgtgatgtgacatgcccgtttggattttactctgat-gttgaat 22906403  T
Q  183 tattattatttaatggattttgggaaacggtgtgttaca 221  Q
    ||||||||||||||  |||||||||||||| ||||||||    
T  22906402 tattattatttaattaattttgggaaacggggtgttaca 22906364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 89 - 221
Target Start/End: Complemental strand, 22905850 - 22905720
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaa-gaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatatta 187  Q
    ||||||||||||||||||||||||||  ||||||||| |  |||||||  ||||  ||||||||||||||| || |||||||||||| |||||| |||||    
T  22905850 atgtttaattaaatagatttttatat--tctatttaaagtgattttgaaaatgtgatgtgacatgcccgtttggattttactctgat-gttgaattatta 22905754  T
Q  188 ttatttaatggattttgggaaacggtgtgttaca 221  Q
    |||||||||  |||||||||||||| ||||||||    
T  22905753 ttatttaattaattttgggaaacggggtgttaca 22905720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 84 - 221
Target Start/End: Complemental strand, 19726142 - 19726004
Alignment:
Q  84 gaagaatgtttaattaaatagatttttatatattctatttaagaa-attttgatga-tgtagtgtgacatgcccgtt-ggggttttactctgattgttga 180  Q
    |||| |||||||||||||||||||||| ||||||||||||||||  ||| | || | |||  ||||||||||||||| ||||||||||||||||  ||||    
T  19726142 gaaggatgtttaattaaatagattttt-tatattctatttaagatgattattataaatgtgatgtgacatgcccgtttggggttttactctgata-ttga 19726045  T
Q  181 aatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    | |||||||||||||| ||||||||||||||| ||||||||    
T  19726044 attattattatttaattgattttgggaaacggggtgttaca 19726004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 5290820 - 5290895
Alignment:
Q  53 tattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaa 129  Q
    ||||||||||||||||||| ||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||    
T  5290820 tattccgctgcaagtttaatgatgaattttg-aaggatgtttaattaaatagatttttatatattctatttaagaaa 5290895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 174
Target Start/End: Original strand, 14616878 - 14616997
Alignment:
Q  49 aaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtga 148  Q
    ||||||||||||||||   |||| |||| |||   |||| ||||||||||||||| |||||||||  ||||||||||||||||||||  |||||||||||    
T  14616878 aaaatattccgctgcataattaatgatgtttt---gaaggatgtttaattaaata-atttttata--ttctatttaagaaattttgaatatgtagtgtga 14616971  T
Q  149 catgcccgttggggttttactctgat 174  Q
    |||||||||| ||| |||||||||||    
T  14616972 catgcccgtttgggatttactctgat 14616997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 50 - 222
Target Start/End: Original strand, 14595282 - 14595448
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||| |||||||||||  |||| ||||||||||  ||| || |||| |||||||||||||   |||||||||||||||||||||||  ||||||||||||    
T  14595282 aaattttccgctgcaaaattaatgatgattttg--aaggattttta-ttaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgac 14595375  T
Q  150 atgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    ||||||||| |||  ||||||||||   ||     |||||| ||||| ||||||||||||||| |||||||||    
T  14595376 atgcccgtttgggaattactctgatgcatgtttatttattaattaattgattttgggaaacggggtgttacaa 14595448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 49 - 158
Target Start/End: Complemental strand, 22757826 - 22757723
Alignment:
Q  49 aaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtga 148  Q
    |||||||||||||||||||| || |||||||||  |||| ||||||| ||||||||||||   |||||||||||||||||| |||||   ||||||||||    
T  22757826 aaaatattccgctgcaagttaaatgatgatttt--gaaggatgtttagttaaatagattt---tatattctatttaagaaa-tttgaaattgtagtgtga 22757733  T
Q  149 catgcccgtt 158  Q
    ||||||||||    
T  22757732 catgcccgtt 22757723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 174
Target Start/End: Complemental strand, 2707936 - 2707818
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||| |||||||||||  |||| ||||||||||  ||| ||||||| |||||||||||||   ||||||||||||||||||||| |  ||||||||||||    
T  2707936 aaattttccgctgcaaaattaatgatgattttg--aaggatgttta-ttaaatagatttt---atattctatttaagaaattttaaaaatgtagtgtgac 2707843  T
Q  150 atgcccgttggggttttactctgat 174  Q
    ||||||||| |||  ||||||||||    
T  2707842 atgcccgtttgggaattactctgat 2707818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 222
Target Start/End: Complemental strand, 19439272 - 19439101
Alignment:
Q  44 gttgaaaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtag 143  Q
    |||||| ||||||||||||||| |||||  ||||||||  |||  |||||| |||||||||    || ||||||||||||||||||||||||    ||||    
T  19439272 gttgaagaatattccgctgcaaatttaataatgatttt--gaaagatgttt-attaaatag----ttttatattctatttaagaaattttgaattagtag 19439180  T
Q  144 tgtgacatgcccgttggggttttactctgattgttgaaatatt-attatttaatggattttgggaaacggtgtgttacaa 222  Q
    ||||||||||||||| ||| |||||||||| ||||||| |||| |||||| |||   ||||||| ||||| |||||||||    
T  19439179 tgtgacatgcccgtttgggatttactctga-tgttgaattattaattattaaattacttttgggtaacggggtgttacaa 19439101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 222
Target Start/End: Original strand, 24514444 - 24514610
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||| |||||||||||  |||| ||||||||||  ||| |||| || |||||||||||||   |||||||||||| ||||||||||  ||||||||||||    
T  24514444 aaattttccgctgcaaaattaatgatgattttg--aaggatgtgta-ttaaatagatttt---atattctatttatgaaattttgaaaatgtagtgtgac 24514537  T
Q  150 atgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    ||||||||| |||  ||||||||||   ||     |||||| ||||| ||||||||||||||| |||||||||    
T  24514538 atgcccgtttgggaattactctgatgcatgtttgtttattaattaattgattttgggaaacggggtgttacaa 24514610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 221
Target Start/End: Complemental strand, 28707500 - 28707340
Alignment:
Q  55 ttccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcc 154  Q
    |||||||||||  |||| ||||||||||  ||| ||| ||| |||||||||||||   ||||||||||||||||| |||||  |||||||||||||||||    
T  28707500 ttccgctgcaaaattaatgatgattttg--aaggatgctta-ttaaatagatttt---atattctatttaagaaaatttgaaaatgtagtgtgacatgcc 28707407  T
Q  155 cgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    |||| |||  ||||||||||   ||    ||||||| ||||| ||||||||||||| | ||||||||    
T  28707406 cgtttgggaattactctgatgcatgtttaattattaattaattgattttgggaaacagggtgttaca 28707340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 8761087 - 8761147
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||  ||||||||||||||||||||  |||||||||||||||||||||    
T  8761087 attaaatagatttttata--ttctatttaagaaattttgaaaatgtagtgtgacatgcccgtt 8761147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 23236012 - 23236130
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||||||||||||||| ||||| ||||||| ||  | |  ||||||||||||||| ||||   ||||||||||||||||| |||||  ||||||||||||    
T  23236012 aaatattccgctgcaa-tttaatgatgattatgaaagg--tgtttaattaaatagttttt---atattctatttaagaaaatttgaaaatgtagtgtgac 23236105  T
Q  150 atgcccgttggggttttactctgat 174  Q
    ||||||||| ||| | |||||||||    
T  23236106 atgcccgtttgggatatactctgat 23236130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 222
Target Start/End: Original strand, 19301337 - 19301439
Alignment:
Q  119 tatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaa-tattattatttaatggattttgggaaacggtgtgt 217  Q
    ||||||| |||||||||  | |||||||  ||||||| ||||||||| |||||||| ||||||| ||||||||||| || ||||||||||||||| ||||    
T  19301337 tatttaataaattttgaaaa-gtagtgtagcatgcccattggggtttcactctgat-gttgaaaatattattattttattgattttgggaaacggggtgt 19301434  T
Q  218 tacaa 222  Q
    |||||    
T  19301435 tacaa 19301439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 8768824 - 8768880
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcc 154  Q
    ||||||||||||||||||  ||||||||||||||||||||  |||||||||||||||||    
T  8768824 attaaatagatttttata--ttctatttaagaaattttgaaaatgtagtgtgacatgcc 8768880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 9623394 - 9623440
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||    
T  9623394 tatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtt 9623440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 19473009 - 19473070
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||||||| | |||||||||    
T  19473009 tatattctatttaagaaattttgaaaa-gtagtgtgacatgcccgttggggatatactctgat 19473070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 221
Target Start/End: Original strand, 21794125 - 21794252
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaat-atta 187  Q
    ||||||||| ||||||||||||||||  ||||||| |||||||| ||  ||||||||||||||||||||| | |||||||||||| |||| || | ||||    
T  21794125 atgtttaat-aaatagatttttatat--tctattttagaaattt-gaaaatgtagtgtgacatgcccgtt-gcgttttactctga-tgttaaattaatta 21794218  T
Q  188 ttatttaatggattttgggaaacggtgtgttaca 221  Q
    |||||||||   ||||||| ||||| ||||||||    
T  21794219 ttatttaattacttttgggtaacggggtgttaca 21794252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Complemental strand, 24561725 - 24561644
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||  |||||||| ||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||    
T  24561725 gtttaattaaatag--ttttatat-ttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 24561644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 14996628 - 14996675
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttg 159  Q
    ||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  14996628 tatattctatttaaggaattttgaaaatgtagtgtgacatgcccgttg 14996675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 221
Target Start/End: Complemental strand, 19448813 - 19448684
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattat 188  Q
    |||||||||||||||| ||||   ||||||||||||||||| |||||  | ||||| ||| ||||||||| ||| |||||||| ||   ||    |||||    
T  19448813 atgtttaattaaatagttttt---atattctatttaagaaaatttgaaaaagtagtctgatatgcccgtttgggatttactctaatgtatgtttaattat 19448717  T
Q  189 tatttaatggattttgggaaacggtgtgttaca 221  Q
    |||||||| | ||||||| ||||| ||||||||    
T  19448716 tatttaattgcttttgggtaacggggtgttaca 19448684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 221
Target Start/End: Complemental strand, 19450807 - 19450678
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattat 188  Q
    |||||||||||||||| ||||   ||||||||||||||||| |||||  | ||||| ||| ||||||||| ||| |||||||| ||   ||    |||||    
T  19450807 atgtttaattaaatagttttt---atattctatttaagaaaatttgaaaaagtagtctgatatgcccgtttgggatttactctaatgtatgtttaattat 19450711  T
Q  189 tatttaatggattttgggaaacggtgtgttaca 221  Q
    |||||||| | ||||||| ||||| ||||||||    
T  19450710 tatttaattgcttttgggtaacggggtgttaca 19450678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 14582567 - 14582600
Alignment:
Q  142 agtgtgacatgcccgttggggttttactctgatt 175  Q
    ||||||||||||||||||||||||||||||||||    
T  14582567 agtgtgacatgcccgttggggttttactctgatt 14582600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 26419393 - 26419462
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggg 161  Q
    ||||||||| |||||||||||||||  |||||||| ||||||||| |  | ||||||||||||||||||||||    
T  26419393 atgtttaat-aaatagatttttata--ttctattttagaaattttaaaaaagtagtgtgacatgcccgttggg 26419462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 174
Target Start/End: Complemental strand, 7428892 - 7428775
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||| |||||||||||  |||| ||||||||||  ||| || |||| |||||||||||||   ||||||||||| |||||||| ||  ||||||||||||    
T  7428892 aaattttccgctgcaaaattaatgatgattttg--aaggattttta-ttaaatagatttt---atattctattttagaaattt-gaaaatgtagtgtgac 7428800  T
Q  150 atgcccgttggggttttactctgat 174  Q
    ||| ||||| |||  ||||||||||    
T  7428799 atgtccgtttgggaattactctgat 7428775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 174
Target Start/End: Complemental strand, 14723939 - 14723819
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatga-tgtagtgtga 148  Q
    ||||||||||||||||  |||| ||||||||||  ||| ||||||| |||  ||||||||||| |  |||| |||| |||||||||  | ||||||||||    
T  14723939 aaatattccgctgcaaaattaatgatgattttg--aaggatgttta-ttagttagatttttatgt--tctaattaataaattttgaaaaatgtagtgtga 14723845  T
Q  149 catgcccgttggggttttactctgat 174  Q
    |||||||||| |||  ||||||||||    
T  14723844 catgcccgtttgggaattactctgat 14723819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 24412980 - 24413026
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttg 159  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||||    
T  24412980 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgttg 24413026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 155
Target Start/End: Complemental strand, 12166760 - 12166697
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgccc 155  Q
    ||||||||| |||||||||||| |||||||||||| |||||||| ||  ||||||||||||||||||    
T  12166760 atgtttaat-aaatagattttt-tatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 12166697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 18316705 - 18316750
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  18316705 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 18316750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 19589250 - 19589312
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||| ||||||||||||||||||    ||||||||||||||||||| |||  ||||||||||    
T  19589250 tatatactatttaagaaattttgaattagtagtgtgacatgcccgtttgggaattactctgat 19589312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 22799201 - 22799246
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  22799201 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 22799246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 175
Target Start/End: Complemental strand, 25346540 - 25346480
Alignment:
Q  114 tattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgatt 175  Q
    ||||||||||||||||||||| | | |||||||||||||| |||| | |||| |||||||||    
T  25346540 tattctatttaagaaattttg-taaagtagtgtgacatgctcgttcgtgtttaactctgatt 25346480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 159
Target Start/End: Complemental strand, 25749176 - 25749132
Alignment:
Q  114 tattctatttaagaaattttgatgatgtagtgtgacatgcccgttg 159  Q
    ||||||||||||||||||||||  | ||||||||||||||||||||    
T  25749176 tattctatttaagaaattttga-aaagtagtgtgacatgcccgttg 25749132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 171
Target Start/End: Complemental strand, 19457194 - 19457115
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactct 171  Q
    |||||||||||||||| ||||   ||||||||||||||||| |||||  | ||||| ||| |||||||||  || ||||||||    
T  19457194 atgtttaattaaatagttttt---atattctatttaagaaaatttgaaaaagtagtctgatatgcccgttttggatttactct 19457115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 171
Target Start/End: Complemental strand, 19467339 - 19467260
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactct 171  Q
    |||||||||||||||| ||||   ||||||||||||||||| |||||  | ||||| ||| |||||||||  || ||||||||    
T  19467339 atgtttaattaaatagttttt---atattctatttaagaaaatttgaaaaagtagtctgatatgcccgttttggatttactct 19467260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 158; Significance: 4e-84; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 22163310 - 22163117
Alignment:
Q  29 ttggagtttatttaagttgaaaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaa 128  Q
    |||| |||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22163310 ttggggtttatttaagttgaaaaatattccgatgcaagtttaatgatgattttgtgaagaatgtttaattaaatagatttttatatattctatttaagaa 22163211  T
Q  129 attttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||||||    
T  22163210 aatttgatgatgtagtgtgacatgcccgttggggttttactctgattgctgaaatattattatttaattgattttgggaaacggggcgttacaa 22163117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 20187192 - 20187027
Alignment:
Q  53 tattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatg 152  Q
    ||||||||||||||||||| ||||| ||| | ||| ||||||||||||||||||||||||||||||||||||||||| |||||   ||||||||||||||    
T  20187192 tattccgctgcaagtttaatgatgaattttg-aaggatgtttaattaaatagatttttatatattctatttaagaaa-tttgaaattgtagtgtgacatg 20187095  T
Q  153 cccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    |||||| ||||||||||| || |||||||  ||||||||||||| ||||||||||||||| ||||||||    
T  20187094 cccgtttgggttttactccga-tgttgaacaattattatttaattgattttgggaaacggggtgttaca 20187027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 11851344 - 11851509
Alignment:
Q  53 tattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatg 152  Q
    ||||||||||||||||||| ||||| ||| | ||| |||||||||||||||||||| ||||||||||||||||||||  ||||   ||||||||||||||    
T  11851344 tattccgctgcaagtttaatgatgaattttg-aaggatgtttaattaaatagatttgtatatattctatttaagaaa-attgaaattgtagtgtgacatg 11851441  T
Q  153 cccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    |||| | |||||||||||| | |||||||  ||||||||||||| ||||||||||||||| ||||||||    
T  11851442 cccgattgggttttactct-aatgttgaacaattattatttaattgattttgggaaacggggtgttaca 11851509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 48 - 221
Target Start/End: Complemental strand, 13435269 - 13435099
Alignment:
Q  48 aaaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaa-attttgatgatgtagtgt 146  Q
    ||||||||||||||||||||| || ||||||||| | ||| ||||||||||||||||||||||||||  |||||||||||  |||||||  |||   |||    
T  13435269 aaaaatattccgctgcaagttaaatgatgatttttg-aaggatgtttaattaaatagatttttatat--tctatttaagatgattttgaaaatgcgatgt 13435173  T
Q  147 gacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    ||||||||||||  ||||||||||| || |||||| |||||||||||||| ||||||||||||||| ||||||||    
T  13435172 gacatgcccgtttaggttttactctaat-gttgaattattattatttaattgattttgggaaacggggtgttaca 13435099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 51 - 196
Target Start/End: Complemental strand, 14542336 - 14542195
Alignment:
Q  51 aatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaa-ttttgatgatgtagtgtgac 149  Q
    ||||||||||||||  ||||| ||| ||||||  ||| ||||||||||||||||||||||||||  ||||||||||||| |||| |  ||||||||||||    
T  14542336 aatattccgctgcagatttaatgataattttg--aaggatgtttaattaaatagatttttatat--tctatttaagaaaattttaaaaatgtagtgtgac 14542241  T
Q  150 atgcccgttggggttttactctgattgttgaaatattattatttaat 196  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||||||    
T  14542240 atgcccgtttgggttttactctga-tgttgaattattattatttaat 14542195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 222
Target Start/End: Complemental strand, 14292268 - 14292098
Alignment:
Q  51 aatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaa-ttttgatgatgtagtgtgac 149  Q
    ||||||||||||||  ||||| ||| |||||||  || ||||||||||||||||||||||||||  ||||||||||||| ||||||  ||||||||||||    
T  14292268 aatattccgctgcagatttaatgataattttgg--aggatgtttaattaaatagatttttatat--tctatttaagaaaattttgaaaatgtagtgtgac 14292173  T
Q  150 atgcccgttggggttttactctgattgttga---aatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    ||||||||| |||||||||||||| ||||||   | ||||||||||||||   ||||||||||| | |||||||||    
T  14292172 atgcccgtttgggttttactctga-tgttgagttattattattatttaattagttttgggaaacagggtgttacaa 14292098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 222 - 288
Target Start/End: Original strand, 9021761 - 9021827
Alignment:
Q  222 aagcctagactctgaaacatggattatagcttagagctaattggtttacatttcaaagattcttact 288  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9021761 aagcctagactctggaacatggattatagcttagagctaattggtttacatttcaaagattcatact 9021827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 50 - 221
Target Start/End: Original strand, 2249651 - 2249812
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||| |||||||||||  |||| ||||||||||  ||| ||||||| |||||||||||||   |||||||||||||||||||||||  ||||||||||||    
T  2249651 aaattttccgctgcaaaattaatgatgattttg--aaggatgttta-ttaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgac 2249744  T
Q  150 atgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    ||||||||| |||  |||||||||    || |   |||||| ||||| ||||||||||||||| ||||||||    
T  2249745 atgcccgtttgggaattactctga----tgcatgtttattaattaattgattttgggaaacggggtgttaca 2249812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 98 - 222
Target Start/End: Original strand, 11957317 - 11957441
Alignment:
Q  98 taaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaat-attattatttaat 196  Q
    ||||||||||||  ||||||| ||||||||||||||||  ||||||||||||||| |||||  ||||||||||||| ||||||| | |||||||||||||    
T  11957317 taaatagattttcttatattcaatttaagaaattttgaaaatgtagtgtgacatgaccgtttaggttttactctga-tgttgaattaattattatttaat 11957415  T
Q  197 ggattttgggaaacggtgtgttacaa 222  Q
       ||||||| ||||| |||||||||    
T  11957416 tatttttgggtaacggggtgttacaa 11957441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 174
Target Start/End: Original strand, 16830619 - 16830739
Alignment:
Q  53 tattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagattttt--atatattctatttaagaaattttgatgatgtagtgtgaca 150  Q
    ||||||||||||||||||| ||||||||||   || ||| || |||||||||||||||  |||||||||||||||||||||| ||   ||| ||||||||    
T  16830619 tattccgctgcaagtttaatgatgattttgt--aggatgctttattaaatagatttttttatatattctatttaagaaattt-gaaattgtggtgtgaca 16830715  T
Q  151 tgcccgttggggttttactctgat 174  Q
    |||||||| |||||||||||||||    
T  16830716 tgcccgtttgggttttactctgat 16830739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 13303935 - 13304046
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggtt-ttactctgattgttgaaata-ttattatttaatggattttgggaaa 209  Q
    |||||||||||||||||||||| |  ||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||| |||| | || ||    
T  13303935 tatattctatttaagaaattttaaaaatgtagtgtgacatgcccgtttgggttattactctga-tgttgaaatatttattatttaattgattattgggaa 13304033  T
Q  210 cggtgtgttacaa 222  Q
    ||| |||||||||    
T  13304034 cggggtgttacaa 13304046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 13314611 - 13314722
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggtt-ttactctgattgttgaaata-ttattatttaatggattttgggaaa 209  Q
    |||||||||||||||||||||| |  ||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||| |||| | || ||    
T  13314611 tatattctatttaagaaattttaaaaatgtagtgtgacatgcccgtttgggttattactctga-tgttgaaatatttattatttaattgattattgggaa 13314709  T
Q  210 cggtgtgttacaa 222  Q
    ||| |||||||||    
T  13314710 cggggtgttacaa 13314722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 2270876 - 2270993
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||||||||||||||| || || ||||||||||  ||| ||||||| |||||||| ||||   |||||||||||||||||||||||  ||||||||||||    
T  2270876 aaatattccgctgcaaatt-aatgatgattttg--aaggatgttta-ttaaatagttttt---atattctatttaagaaattttgaaaatgtagtgtgac 2270968  T
Q  150 atgcccgttggggttttactctgat 174  Q
    ||||||||| ||| |||||||||||    
T  2270969 atgcccgtttgggatttactctgat 2270993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 84 - 221
Target Start/End: Original strand, 14653357 - 14653492
Alignment:
Q  84 gaagaatgtttaattaaatagatttttatatattctatttaagaa-attttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaa 182  Q
    |||| |||||| |||||||||||||||||||  |||||||||||  ||| | || |  |  |||||||||||||||||||||||||||||| | |||||     
T  14653357 gaaggatgttttattaaatagatttttatat--tctatttaagatgattattataagttgatgtgacatgcccgttggggttttactctga-tattgaat 14653453  T
Q  183 tattattatttaatggattttgggaaacggtgtgttaca 221  Q
    ||||||||||||||  |||||||||||||| ||||||||    
T  14653454 tattattatttaattaattttgggaaacggggtgttaca 14653492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 13325526 - 13325616
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggtt-ttactctgattgttgaaata-ttattatttaatggatt 201  Q
    |||||||||||||||||||||| |  ||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||| ||||    
T  13325526 tatattctatttaagaaattttaaaaatgtagtgtgacatgcccgtttgggttattactctga-tgttgaaatatttattatttaattgatt 13325616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 54900727 - 54900844
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||||||||||||||| || || ||||||||||  ||| ||||||| |||||||| ||||   |||||||||||||||||||||||  ||||||||||||    
T  54900727 aaatattccgctgcaaatt-aatgatgattttg--aaggatgttta-ttaaatagttttt---atattctatttaagaaattttgaaaatgtagtgtgac 54900819  T
Q  150 atgcccgttggggttttactctgat 174  Q
    ||||||||||||  || ||||||||    
T  54900820 atgcccgttgggtattaactctgat 54900844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 222
Target Start/End: Original strand, 14648884 - 14649046
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||| |||||||||||  |||| ||||||||||  ||| || |||| |||||||||||||   ||||||||||||| |||||||||  ||||||||||||    
T  14648884 aaattttccgctgcaaaattaatgatgattttg--aaggattttta-ttaaatagatttt---atattctatttaacaaattttgaaaatgtagtgtgac 14648977  T
Q  150 atgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    ||||||||| |||  |||||||||    || |   |||||| ||||| ||||||||||||||| |||||||||    
T  14648978 atgcccgtttgggaattactctga----tgcatgtttattaattaattgattttgggaaacggggtgttacaa 14649046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 45221400 - 45221561
Alignment:
Q  55 ttccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcc 154  Q
    |||||||||||  |||| ||||||||||  ||| ||| ||| |||||||||||||   ||||||||||||||||| |||||  |||||||||||||||||    
T  45221400 ttccgctgcaacattaatgatgattttg--aaggatgctta-ttaaatagatttt---atattctatttaagaaaatttgaaaatgtagtgtgacatgcc 45221493  T
Q  155 cgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    |||| |||  ||||||||||   ||     |||||| ||||| ||||||||||||||| |||||||||    
T  45221494 cgtttgggaattactctgatgcatgtttatttattaattaattgattttgggaaacggggtgttacaa 45221561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 11965510 - 11965629
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttg-atgatgtagtgtga 148  Q
    ||||||||||||||||  |||| |||| |||   |||| |||||||||||||||| |||||||||   ||||||||||||||||| || | |||||||||    
T  11965510 aaatattccgctgcaaaattaatgatgtttt---gaaggatgtttaattaaatagttttttatatg--ctatttaagaaattttggatta-gtagtgtga 11965603  T
Q  149 catgcccgttggggttttactctgat 174  Q
    |||||||||| ||| |||||||||||    
T  11965604 catgcccgtttgggatttactctgat 11965629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 15518548 - 15518485
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggtt-ttactctgat 174  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||||||    
T  15518548 tatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggttattactctgat 15518485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 174
Target Start/End: Complemental strand, 17495647 - 17495565
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||| ||||   ||| |||||||||||||||||||  ||||||||||||||||||||| ||| | |||||||||    
T  17495647 atgtttaattaaatagttttt---ataatctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggatatactctgat 17495565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 221
Target Start/End: Original strand, 24124007 - 24124116
Alignment:
Q  112 tatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaat-attattatttaatggattttgggaaa 209  Q
    ||||||||||||||||||  |||||  ||||||||||||||||||||| |||||||||||||| ||||||| | |||||||||||||   ||||||| ||    
T  24124007 tatattctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtt-gggttttactctga-tgttgaattaattattatttaattacttttgggtaa 24124104  T
Q  210 cggtgtgttaca 221  Q
    ||| ||||||||    
T  24124105 cggggtgttaca 24124116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 40594 - 40474
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaa 195  Q
    ||||||||||||||   |||||||||||||||||| ||||  ||||||||||||||||||||| |||  ||||||||||   ||   | |||||| ||||    
T  40594 attaaatagatttt---atattctatttaagaaatcttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatg---ttttattaattaa 40501  T
Q  196 tgga-ttttgggaaacggtgtgttaca 221  Q
    | || ||||||||||||||||||||||    
T  40500 ttgatttttgggaaacggtgtgttaca 40474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 18757707 - 18757768
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||||| |||||||||||||||    
T  18757707 tatattctatttaagaa-ttttgaaaatgtagtgtgacatgcccgtttgggttttactctgat 18757768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 12356656 - 12356739
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattg 176  Q
    |||||||||||||||| ||||   ||||||||||||||||| |||||  ||||||||||||||||||||| ||| ||||||| |||||    
T  12356656 atgtttaattaaatagttttt---atattctatttaagaaaatttgaa-atgtagtgtgacatgcccgtttgggatttactcagattg 12356739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 174
Target Start/End: Original strand, 16839118 - 16839240
Alignment:
Q  53 tattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagattttt----atatattctatttaagaaattttgatgatgtagtgtga 148  Q
    ||||||||||||||||||| ||||||||||   || ||| || || ||||||||||||    ||||||| |||||||||||||| ||   ||| ||||||    
T  16839118 tattccgctgcaagtttaatgatgattttgt--aggatgctttatcaaatagatttttttttatatattttatttaagaaattt-gaaattgtggtgtga 16839214  T
Q  149 catgcccgttggggttttactctgat 174  Q
    |||||||||| |||||||||||||||    
T  16839215 catgcccgtttgggttttactctgat 16839240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 5840769 - 5840647
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaa 195  Q
    ||||||||||||||   ||||||||||||||||| |||||  ||||||||||||||||||||| ||   ||||||||||   ||    ||||||| ||||    
T  5840769 attaaatagatttt---atattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttggaaattactctgatgcatgtttaattattaattaa 5840673  T
Q  196 tggattttgggaaacggtgtgttaca 221  Q
    | ||||||||||||| | ||||||||    
T  5840672 ttgattttgggaaactgggtgttaca 5840647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 174
Target Start/End: Original strand, 11306426 - 11306508
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||| ||||   ||| ||||||||||||| |||||  | ||||||||||||||||||| ||| |||||||||||    
T  11306426 atgtttaattaaatagttttt---ataatctatttaagaaaatttgaaaaagtagtgtgacatgcccgtttgggatttactctgat 11306508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 158
Target Start/End: Original strand, 18719759 - 18719817
Alignment:
Q  97 ttaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    |||||||||||||   |||||||||||||||||||||||  |||||||||||||||||||||    
T  18719759 ttaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtt 18719817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 221
Target Start/End: Complemental strand, 29550370 - 29550241
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaat-atta 187  Q
    ||||||||| ||||||||||||| ||  ||||||||||||||||||||   |||||||||||||||||||  || |  ||||||| ||||||| | ||||    
T  29550370 atgtttaat-aaatagatttttacat--tctatttaagaaattttgatatagtagtgtgacatgcccgtttaggctgaactctga-tgttgaattaatta 29550275  T
Q  188 ttatttaatggattttgggaaacggtgtgttaca 221  Q
    |||||||||   ||||||| ||||| ||||||||    
T  29550274 ttatttaattacttttgggtaacggggtgttaca 29550241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 54972303 - 54972241
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||| |||  ||||||||||    
T  54972303 tatattctatttaagaaattttgaaaatgaagtgtgacatgcccgtttgggaattactctgat 54972241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 54974913 - 54974851
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||| |||  ||||||||||    
T  54974913 tatattctatttaagaaattttgaaaatgaagtgtgacatgcccgtttgggaattactctgat 54974851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 54977523 - 54977461
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||| |||  ||||||||||    
T  54977523 tatattctatttaagaaattttgaaaatgaagtgtgacatgcccgtttgggaattactctgat 54977461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 8584028 - 8584109
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||  |||||||| ||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||    
T  8584028 gtttaattaaatag--ttttatat-ttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 8584109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 13969535 - 13969616
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||  |||||||| ||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||    
T  13969535 gtttaattaaatag--ttttatat-ttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 13969616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 13975014 - 13975095
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||  |||||||| ||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||    
T  13975014 gtttaattaaatag--ttttatat-ttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 13975095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 14012833 - 14012914
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||  |||||||| ||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||    
T  14012833 gtttaattaaatag--ttttatat-ttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 14012914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Complemental strand, 14089375 - 14089294
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||  |||||||| ||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||    
T  14089375 gtttaattaaatag--ttttatat-ttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 14089294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Complemental strand, 49398915 - 49398834
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||  |||||||| ||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||    
T  49398915 gtttaattaaatag--ttttatat-ttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 49398834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 221
Target Start/End: Original strand, 18136996 - 18137102
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacg 211  Q
    ||||||||||||||||||||||||   |||||||||| ||||||||| || | |||||||||   || |    |||||||||||| ||||||||| ||||    
T  18136996 tatattctatttaagaaattttgaaagtgtagtgtgatatgcccgtttggttattactctgacgattta---tttattatttaattgattttgggtaacg 18137092  T
Q  212 gtgtgttaca 221  Q
    | ||||||||    
T  18137093 gggtgttaca 18137102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 174
Target Start/End: Complemental strand, 18957274 - 18957192
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatga-tgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||| ||||||||||||||||  |||||||||||||||||||  |  ||||||||||||||||||| ||||| |||||||||    
T  18957274 atgtttaat-aaatagatttttatat--tctatttaagaaattttgaaaagagtagtgtgacatgcccgtt-gggttgtactctgat 18957192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 31691334 - 31691445
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaata-ttattatttaatggattttgggaaac 210  Q
    ||||| ||||||||||||||||||   |||||||||||||||||||| |||  ||||||||||   |||  || ||| | |||||| ||||||||| |||    
T  31691334 tatatgctatttaagaaattttgaaagtgtagtgtgacatgcccgtttgggaattactctgatgcatgatttatttactgtttaattgattttgggtaac 31691433  T
Q  211 ggtgtgttacaa 222  Q
    || |||||||||    
T  31691434 ggggtgttacaa 31691445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 222
Target Start/End: Complemental strand, 31942883 - 31942772
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaata-ttattatttaatggattttgggaaac 210  Q
    ||||| ||||||||||||||||||   |||||||||||||||||||| |||  ||||||||||   |||  || ||| | |||||| ||||||||| |||    
T  31942883 tatatgctatttaagaaattttgaaagtgtagtgtgacatgcccgtttgggaattactctgatgcatgatttatttactgtttaattgattttgggtaac 31942784  T
Q  211 ggtgtgttacaa 222  Q
    || |||||||||    
T  31942783 ggggtgttacaa 31942772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 155
Target Start/End: Complemental strand, 49162665 - 49162602
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgccc 155  Q
    ||||||||| ||||||||||||||||  ||||||||||||||||||||   ||||||||||||||||    
T  49162665 atgtttaat-aaatagatttttatat--tctatttaagaaattttgatatagtagtgtgacatgccc 49162602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 18130500 - 18130607
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacg 211  Q
    |||||| |||||||||||||||||   |||||||||||||||||| | || | ||||||||||  || |    |||||||||||| ||||||||| ||||    
T  18130500 tatattttatttaagaaattttgaaattgtagtgtgacatgcccgattggttcttactctgatgattta---tttattatttaattgattttgggtaacg 18130596  T
Q  212 gtgtgttacaa 222  Q
      |||||||||    
T  18130597 tggtgttacaa 18130607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 15935691 - 15935753
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgatt 175  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||| | | | ||||||||||    
T  15935691 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtttgagatatactctgatt 15935753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 15937541 - 15937603
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgatt 175  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||| | | | ||||||||||    
T  15937541 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtttgagatatactctgatt 15937603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 17199680 - 17199724
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttga 135  Q
    |||||||||||||||||||||  ||||||||||||||| ||||||||    
T  17199680 atgtttaattaaatagatttt--tatattctatttaaggaattttga 17199724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 17706593 - 17706554
Alignment:
Q  183 tattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    |||||||||||||| ||||||||||||||| |||||||||    
T  17706593 tattattatttaattgattttgggaaacggggtgttacaa 17706554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 11888808 - 11888747
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||| |||||||||||||||||||  | ||||||||||||||||||| ||| | |||||||||    
T  11888808 tataatctatttaagaaattttgaaaa-gtagtgtgacatgcccgtttgggatatactctgat 11888747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 12148226 - 12148165
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||| |||||||||||||||||||  | ||||||||||||||||||| ||| | |||||||||    
T  12148226 tataatctatttaagaaattttgaaaa-gtagtgtgacatgcccgtttgggatatactctgat 12148165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 12152352 - 12152291
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||| |||||||||||||||||||  | ||||||||||||||||||| ||| | |||||||||    
T  12152352 tataatctatttaagaaattttgaaaa-gtagtgtgacatgcccgtttgggatatactctgat 12152291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 174
Target Start/End: Complemental strand, 12418845 - 12418764
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||| ||||||||||||||||  |||||||||| |||||| |  | ||| ||||||||||||||| ||||| |||||||||    
T  12418845 atgtttaat-aaatagatttttatat--tctatttaaggaattttaaaaaagtattgtgacatgcccgtt-gggttgtactctgat 12418764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 13037615 - 13037660
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  13037615 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 13037660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 13043980 - 13044025
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  13043980 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 13044025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 14544885 - 14544947
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||||| ||   | ||||||||||||||||||||| |||  ||||||||||    
T  14544885 tatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttgggaattactctgat 14544947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 174
Target Start/End: Complemental strand, 14083974 - 14083893
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaattttg-atgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||  |||||||| ||||||||||||||  ||| |  ||||||||||||||||| ||| ||| |||||||||||    
T  14083974 gtttaattaaatag--ttttatat-ttctatttaagaaaaattggaaaatgtagtgtgacatgcctgtttgggatttactctgat 14083893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 46724129 - 46724189
Alignment:
Q  114 tattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgatt 175  Q
    ||||||||||||||||||||||  | |||||||||||| |||||| | |||| |||||||||    
T  46724129 tattctatttaagaaattttga-aaagtagtgtgacatacccgttcgtgtttaactctgatt 46724189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 17244362 - 17244426
Alignment:
Q  112 tatattctatttaagaaattttg-atgatgtagtgtgacatgcccgttggggtt-ttactctgat 174  Q
    |||||||||||||||||| |||| |  ||| ||||||||||||||||| ||||| ||||||||||    
T  17244362 tatattctatttaagaaaatttgaaaaatgaagtgtgacatgcccgtttgggttattactctgat 17244426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 24191206 - 24191166
Alignment:
Q  183 tattattatttaatggattttgggaaacggtgtgttacaaa 223  Q
    |||||||||||||| ||||||||||||| | ||||||||||    
T  24191206 tattattatttaattgattttgggaaacagggtgttacaaa 24191166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 154; Significance: 1e-81; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 26883718 - 26883525
Alignment:
Q  29 ttggagtttatttaagttgaaaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaa 128  Q
    ||||||||||||| |||||||||||||||||||||| |||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26883718 ttggagtttattttagttgaaaaatattccgctgcatgtttaatgatggttttgtgaagaatgtttaattaaatagatttttatatattctatttaagaa 26883619  T
Q  129 attttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  26883618 attttgatgacgtagtgtgacatgcccgtttgggttttactctgattgttgaaatattatcatttaattgattttgggaaacggggtgttacaa 26883525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 29 - 220
Target Start/End: Original strand, 27211590 - 27211781
Alignment:
Q  29 ttggagtttatttaagttgaaaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaa 128  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||| |||||||||    
T  27211590 ttggagtttaattaagttgaaaaatattccgctgcaagtttaatgatgattttgtgaagaatgttgaattaaatagatttttatatattccatttaagaa 27211689  T
Q  129 attttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttac 220  Q
    |||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| |||||| |||||| |||||||| |||||||    
T  27211690 attttgatgacgtagtgtgacatacccgtttgggttttactctgattgttgaaatattattgtttaattgattttaggaaacggggtgttac 27211781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 222
Target Start/End: Complemental strand, 23297052 - 23296910
Alignment:
Q  84 gaagaatgtttaattaaatagattttt----atatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttg 179  Q
    |||| |||||||||||||||| |||||    |||||||| ||||||||||||||||    ||||||||||||||||||| |||||||||||||| |||||    
T  23297052 gaaggatgtttaattaaatagttttttttatatatattccatttaagaaattttgaattagtagtgtgacatgcccgtttgggttttactctga-tgttg 23296954  T
Q  180 aaata-ttattatttaatggattttgggaaacggtgtgttacaa 222  Q
    |  || |||||||| ||| ||||||||| ||||| |||||||||    
T  23296953 atttatttattattaaattgattttgggtaacggggtgttacaa 23296910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 96 - 223
Target Start/End: Complemental strand, 22809410 - 22809287
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaata-ttattattta 194  Q
    ||||||||||||||   |||||||||||||||||||||||  ||||||||||||||||||||| ||| |||||||||||   |||| || |||||| | |    
T  22809410 attaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggatttactctgat--gtgaattatttattactaa 22809316  T
Q  195 atggattttgggaaacggtgtgttacaaa 223  Q
    || ||||||||| ||||| ||||||||||    
T  22809315 attgattttgggtaacggggtgttacaaa 22809287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 96 - 222
Target Start/End: Complemental strand, 24503715 - 24503594
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaa 195  Q
    ||||||||||||||   |||||||||||||||||||||||  ||||||||||||||||||||| |||  ||||||||||   |||   ||||||| ||||    
T  24503715 attaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatga---attattaattaa 24503622  T
Q  196 tgga-ttttgggaaacggtgtgttacaa 222  Q
    |||| ||||||||||||| |||||||||    
T  24503621 tggatttttgggaaacggggtgttacaa 24503594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 6031685 - 6031565
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaa 195  Q
    ||||||||||||||   |||||||||||||||||||||||  ||||||||||||||||||||| |||  ||||||||||   |||   ||||||| ||||    
T  6031685 attaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgttagggaattactctgatgcatga---attattaattaa 6031592  T
Q  196 tgga-ttttgggaaacggtgtgttaca 221  Q
    |||| ||||||||||||| ||||||||    
T  6031591 tggatttttgggaaacggggtgttaca 6031565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 31754971 - 31754851
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaa 195  Q
    ||||||||||||||   |||||||||||||||||||||||  ||||||||||||||||||||| |||  ||||||||||   |||   ||||||| ||||    
T  31754971 attaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatga---attattaattaa 31754878  T
Q  196 tgga-ttttgggaaacggtgtgttaca 221  Q
    |||| ||||||||||||| ||||||||    
T  31754877 tggatttttgggaaacggggtgttaca 31754851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 19715480 - 19715590
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaata-ttattatttaatggattttgggaaac 210  Q
    ||||||||||||||||||||||||    ||||||||||||||||||| ||| |||||||||| ||||||| || |||||||| ||| ||||||||| |||    
T  19715480 tatattctatttaagaaattttgaattagtagtgtgacatgcccgtttgggatttactctga-tgttgaattatttattattaaattgattttgggtaac 19715578  T
Q  211 ggtgtgttacaa 222  Q
     | |||||||||    
T  19715579 agggtgttacaa 19715590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 19720043 - 19720153
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaata-ttattatttaatggattttgggaaac 210  Q
    ||||||||||||||||||||||||    ||||||||||||||||||| ||| |||||||||| ||||||| || |||||||| ||| ||||||||| |||    
T  19720043 tatattctatttaagaaattttgaattagtagtgtgacatgcccgtttgggatttactctga-tgttgaattatttattattaaattgattttgggtaac 19720141  T
Q  211 ggtgtgttacaa 222  Q
     | |||||||||    
T  19720142 agggtgttacaa 19720153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 112 - 221
Target Start/End: Original strand, 19791947 - 19792056
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaata-ttattatttaatggattttgggaaac 210  Q
    ||||||||||||||||||||||||    ||||||||||||||||||| ||| |||| ||||| ||||||| || |||||||| ||| ||||||||| |||    
T  19791947 tatattctatttaagaaattttgaattagtagtgtgacatgcccgtttgggatttagtctga-tgttgaattatttattattaaattgattttgggtaac 19792045  T
Q  211 ggtgtgttaca 221  Q
    || ||||||||    
T  19792046 ggggtgttaca 19792056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 174
Target Start/End: Original strand, 25036712 - 25036825
Alignment:
Q  55 ttccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcc 154  Q
    |||||||||||  |||| ||||| ||||  ||| ||||||| |||||||||||||   |||||||||||||||||||||||  |||||||||||||||||    
T  25036712 ttccgctgcaaaattaatgatgactttg--aaggatgttta-ttaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcc 25036805  T
Q  155 cgttggggttttactctgat 174  Q
    |||| |||  ||||||||||    
T  25036806 cgtttgggaattactctgat 25036825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 174
Target Start/End: Original strand, 25040819 - 25040932
Alignment:
Q  55 ttccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcc 154  Q
    |||||||||||  |||| ||||| ||||  ||| ||||||| |||||||||||||   |||||||||||||||||||||||  |||||||||||||||||    
T  25040819 ttccgctgcaaaattaatgatgactttg--aaggatgttta-ttaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcc 25040912  T
Q  155 cgttggggttttactctgat 174  Q
    |||| |||  ||||||||||    
T  25040913 cgtttgggaattactctgat 25040932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 43692821 - 43692712
Alignment:
Q  112 tatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaat-attattatttaatggattttgggaaa 209  Q
    ||||||||||||||||||  |||||  ||||||||||||||||||||| |||||||||||||| ||||||| | |||||||||||||   ||||||| ||    
T  43692821 tatattctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtt-gggttttactctga-tgttgaattaattattatttaattacttttgggtaa 43692724  T
Q  210 cggtgtgttaca 221  Q
    ||| ||||||||    
T  43692723 cggggtgttaca 43692712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 174
Target Start/End: Original strand, 23029654 - 23029767
Alignment:
Q  55 ttccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcc 154  Q
    |||||||||||  |||| ||||||||||  ||| ||| ||| |||||||||||||   ||||||||||||||||| |||||  |||||||||||||||||    
T  23029654 ttccgctgcaaaattaatgatgattttg--aaggatgctta-ttaaatagatttt---atattctatttaagaaaatttgaaaatgtagtgtgacatgcc 23029747  T
Q  155 cgttggggttttactctgat 174  Q
    |||| |||  ||||||||||    
T  23029748 cgtttgggaattactctgat 23029767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 226 - 283
Target Start/End: Complemental strand, 1644725 - 1644668
Alignment:
Q  226 ctagactctgaaacatggattatagcttagagctaattggtttacatttcaaagattc 283  Q
    ||||||||||||||||||||  |||||||||||||||| ||| |||||||||||||||    
T  1644725 ctagactctgaaacatggatcctagcttagagctaatttgttcacatttcaaagattc 1644668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 174
Target Start/End: Original strand, 20964660 - 20964735
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||   |||||||||||||||||| ||||  ||||||||||||||||||||| |||  ||||||||||    
T  20964660 attaaatagatttt---atattctatttaagaaatcttgaaaatgtagtgtgacatgcccgtttgggaattactctgat 20964735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 23061997 - 23061934
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggtt-ttactctgat 174  Q
    |||||||||||||||||||| |||  ||||||||||||||||||||| ||||| ||||||||||    
T  23061997 tatattctatttaagaaattatgaaaatgtagtgtgacatgcccgtttgggttattactctgat 23061934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 23290464 - 23290325
Alignment:
Q  84 gaagaatgtttaattaaatag----atttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttg 179  Q
    |||| ||||||||||||||||     ||||||||||||||||| |||||||||| |    ||||||||||||||||||| | |||||||||||| || ||    
T  23290464 gaaggatgtttaattaaatagttttttttttatatattctattaaagaaattttaaattagtagtgtgacatgcccgtttgagttttactctga-tgatg 23290366  T
Q  180 aaata-ttattatttaatggattttgggaaacggtgtgtta 219  Q
    |  || |||||||| ||| ||||||||| ||||| ||||||    
T  23290365 atttatttattattaaattgattttgggtaacggggtgtta 23290325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 25590823 - 25590894
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggt 163  Q
    ||||||||| |||||||||||||||  |||||||||||||||||||||   ||||||||||||||||||| ||||    
T  25590823 atgtttaat-aaatagatttttata--ttctatttaagaaattttgatatagtagtgtgacatgcccgtttgggt 25590894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 8688328 - 8688167
Alignment:
Q  55 ttccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcc 154  Q
    |||||||||||  |||| ||||||||||  ||| ||| ||| |||||||||||||   ||||||||||||||||| ||| |  |||||||||||||| ||    
T  8688328 ttccgctgcaaaattaatgatgattttg--aaggatgctta-ttaaatagatttt---atattctatttaagaaaatttaaaaatgtagtgtgacatacc 8688235  T
Q  155 cgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    |||| |||  ||||||||||   ||     |||||| ||||| ||||||||||||||| |||||||||    
T  8688234 cgtttgggaattactctgatgcatgtttatttattaattaattgattttgggaaacggggtgttacaa 8688167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 17673394 - 17673456
Alignment:
Q  221 aaagcctagactctgaaacatggattatagcttagagctaattggtttacatttcaaagattc 283  Q
    ||||| ||||||||  |||||||||  |||||||||||||||||||| |||||||||||||||    
T  17673394 aaagcatagactcttgaacatggatcctagcttagagctaattggttcacatttcaaagattc 17673456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 19655090 - 19655152
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||| ||||||  ||||  ||||||||||||||||||||||||| |||||||||||    
T  19655090 tatattctattgaagaaaaattgaaaatgtagtgtgacatgcccgttggggatttactctgat 19655152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 24578742 - 24578684
Alignment:
Q  225 cctagactctgaaacatggattatagcttagagctaattggtttacatttcaaagattc 283  Q
    ||||||||||| |||||||||| ||||||||||||||||  || |||||||||||||||    
T  24578742 cctagactctggaacatggattctagcttagagctaattatttcacatttcaaagattc 24578684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Complemental strand, 200084 - 200003
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||  |||||||| ||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||    
T  200084 gtttaattaaatag--ttttatat-ttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 200003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 6745058 - 6745139
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||  |||||||| ||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||    
T  6745058 gtttaattaaatag--ttttatat-ttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 6745139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 17967006 - 17967087
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||  |||||||| ||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||    
T  17967006 gtttaattaaatag--ttttatat-ttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 17967087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 174
Target Start/End: Complemental strand, 24651890 - 24651773
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    ||||||||||||||||  |||| ||||   ||| |||| |||||||||||||||| |||    ||||||||||||||||| |||||    ||||||||||    
T  24651890 aaatattccgctgcaaaattaatgatg---ttgtgaaggatgtttaattaaatagtttt----atattctatttaagaaaatttgaattagtagtgtgac 24651798  T
Q  150 atgcccgttggggttttactctgat 174  Q
    |||| |||| ||| |||||||||||    
T  24651797 atgcgcgtttgggatttactctgat 24651773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 21906743 - 21906691
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggtt 164  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||| |||||    
T  21906743 tatattctatttaagaaattttgaaaatgaagtgtgacatgcccgtttgggtt 21906691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 3563652 - 3563601
Alignment:
Q  237 aacatggattatagcttagagctaattggtttacatttcaaagattcttact 288  Q
    |||||||||  |||||||||||||||||||||| ||||||||||||| ||||    
T  3563652 aacatggatcctagcttagagctaattggtttatatttcaaagattcatact 3563601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 23263477 - 23263415
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggtt-ttactctgat 174  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||| ||||| ||||||||||    
T  23263477 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtttgggttattactctgat 23263415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 23268693 - 23268631
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggtt-ttactctgat 174  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||| ||||| ||||||||||    
T  23268693 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtttgggttattactctgat 23268631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 221
Target Start/End: Original strand, 27368280 - 27368389
Alignment:
Q  112 tatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaat-attattatttaatggattttgggaaa 209  Q
    ||||||||||||||||||  ||| |  ||||||||||||||||||||| |||||||||||||| ||||||| | |||||||||||||   ||||||| ||    
T  27368280 tatattctatttaagaaaaatttaaaaatgtagtgtgacatgcccgtt-gggttttactctga-tgttgaattaattattatttaattacttttgggtaa 27368377  T
Q  210 cggtgtgttaca 221  Q
     || ||||||||    
T  27368378 tggggtgttaca 27368389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 17628323 - 17628385
Alignment:
Q  221 aaagcctagactctgaaacatggattatagcttagagctaattggtttacatttcaaagattc 283  Q
    ||||| ||||||||  |||||||||  ||||||||||||||||| || |||||||||||||||    
T  17628323 aaagcatagactcttgaacatggatcctagcttagagctaattgattcacatttcaaagattc 17628385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 22797346 - 22797408
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||||  ||||   |||||||||||||||||||| ||| |||||||||||    
T  22797346 tatattctatttaagaaaaattgaacctgtagtgtgacatgcccgtttgggatttactctgat 22797408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 157
Target Start/End: Original strand, 25108089 - 25108189
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||||||||||||||| || || |||| |||||  ||| ||||||| |||||||| ||||   |||||| ||||||||||||||||  ||||||||||||    
T  25108089 aaatattccgctgcaaatt-aatgatgtttttg--aaggatgttta-ttaaatagttttt---atattcaatttaagaaattttgaaaatgtagtgtgac 25108181  T
Q  150 atgcccgt 157  Q
    ||||||||    
T  25108182 atgcccgt 25108189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 221
Target Start/End: Original strand, 28972032 - 28972141
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacg 211  Q
    |||| |||||||||||||||||||    ||||||||||||||||||| |||  ||||||||||   ||    |||||||||||||   ||||||| ||||    
T  28972032 tataatctatttaagaaattttgaaatagtagtgtgacatgcccgtttgggaattactctgatgtatgtttaattattatttaattacttttgggtaacg 28972131  T
Q  212 gtgtgttaca 221  Q
    ||||||||||    
T  28972132 gtgtgttaca 28972141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 174
Target Start/End: Complemental strand, 36800010 - 36799928
Alignment:
Q  87 gaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||| ||||||||||||||||  ||||||| |||||||| ||  ||||||||||||||||| ||| | |||||||||||||    
T  36800010 gaatgtttaat-aaatagatttttatat--tctattttagaaattt-gaaaatgtagtgtgacatgcctgtt-gtgttttactctgat 36799928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 19796008 - 19795946
Alignment:
Q  112 tatattctatttaagaaa-ttttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||||| ||||||  | ||||||||||||||||||| ||| |||||||||||    
T  19796008 tatattctatttaagaaaattttgaaaa-gtagtgtgacatgcccgtttgggatttactctgat 19795946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 66
Target Start/End: Original strand, 19715406 - 19715436
Alignment:
Q  36 ttatttaagttgaaaaatattccgctgcaag 66  Q
    |||||||||||||||||||||||||||||||    
T  19715406 ttatttaagttgaaaaatattccgctgcaag 19715436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 66
Target Start/End: Original strand, 19719969 - 19719999
Alignment:
Q  36 ttatttaagttgaaaaatattccgctgcaag 66  Q
    |||||||||||||||||||||||||||||||    
T  19719969 ttatttaagttgaaaaatattccgctgcaag 19719999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 66
Target Start/End: Original strand, 19791873 - 19791903
Alignment:
Q  36 ttatttaagttgaaaaatattccgctgcaag 66  Q
    |||||||||||||||||||||||||||||||    
T  19791873 ttatttaagttgaaaaatattccgctgcaag 19791903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 22859795 - 22859734
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||| |||||||||||||||||||  | ||||||||||||||||||| ||| | |||||||||    
T  22859795 tataatctatttaagaaattttgaaaa-gtagtgtgacatgcccgtttgggatatactctgat 22859734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 66
Target Start/End: Complemental strand, 24942979 - 24942949
Alignment:
Q  36 ttatttaagttgaaaaatattccgctgcaag 66  Q
    |||||||||||||||||||||||||||||||    
T  24942979 ttatttaagttgaaaaatattccgctgcaag 24942949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 25266801 - 25266740
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||||| |||||  | ||||||||||||||||||| ||| | |||||||||    
T  25266801 tatattctatttaagaaaatttgaaaa-gtagtgtgacatgcccgtttgggatatactctgat 25266740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 288
Target Start/End: Original strand, 37081308 - 37081374
Alignment:
Q  222 aagcctagactctgaaacatggattatagcttagagctaattggtttacatttcaaagattcttact 288  Q
    |||||||||||| | | |||||| | || |||||||||||| |||| ||||||||||||||| ||||    
T  37081308 aagcctagactccggatcatggactctaacttagagctaatcggttcacatttcaaagattcatact 37081374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 24644295 - 24644235
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctga 173  Q
    |||| |||||||||||||||||||  | ||||||||||||||||||| ||| | ||||||||    
T  24644295 tataatctatttaagaaattttgaaaa-gtagtgtgacatgcccgtttgggatatactctga 24644235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 2e-80; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 29 - 220
Target Start/End: Complemental strand, 27904818 - 27904627
Alignment:
Q  29 ttggagtttatttaagttgaaaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaa 128  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  27904818 ttggggtttatttaagttgaaaaatattccgctgcaagtttaatgatgattttgtgaagaatgtttaattaaatagatttttatattttctatttaagaa 27904719  T
Q  129 attttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttac 220  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | ||||||||||||||| |||||||    
T  27904718 attttgataatgtagtgtgacatgcccgtttgggttttactctgattgttgagatattattatttagttgattttgggaaacggggtgttac 27904627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 29 - 221
Target Start/End: Complemental strand, 27898255 - 27898063
Alignment:
Q  29 ttggagtttatttaagttgaaaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaa 128  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| || ||||||||||    
T  27898255 ttggggtttatttaagttgaaaaatattccgctgcaagtttaatgatgattttgtgaagaatgtttaattaaatagatttttatattttatatttaagaa 27898156  T
Q  129 attttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | ||||||||||||||| ||||||||    
T  27898155 attttgataatgtagtgtgacatgcccgtttgggttttactctgattgttgagatattattatttagttgattttgggaaacggggtgttaca 27898063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 53 - 222
Target Start/End: Original strand, 23725420 - 23725586
Alignment:
Q  53 tattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatg 152  Q
    ||||||||||||||||||| ||||| ||| | ||| ||||||||||||||| ||||||||||||||||||||||||| |||||   ||||||||| ||||    
T  23725420 tattccgctgcaagtttaatgatgaattttg-aaggatgtttaattaaataaatttttatatattctatttaagaaa-tttgaaattgtagtgtggcatg 23725517  T
Q  153 cccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
     |||||||||||||||||||| |||||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  23725518 tccgttggggttttactctga-tgttgaaaaattattatttaattgatttggggaaacggggtgttacaa 23725586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 84 - 221
Target Start/End: Original strand, 11171891 - 11172026
Alignment:
Q  84 gaagaatgtttaattaaatagatttttatatattctatttaagaa-attttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaa 182  Q
    |||| ||||||||||||||||||||||||||  |||||||||    |||||||  ||||  ||||||||||||||| ||||||||||||||| ||||||     
T  11171891 gaaggatgtttaattaaatagatttttatat--tctatttaaattgattttgaaaatgtgatgtgacatgcccgtttgggttttactctgat-gttgaat 11171987  T
Q  183 tattattatttaatggattttgggaaacggtgtgttaca 221  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  11171988 tattattatttaattgattttgggaaacggggtgttaca 11172026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 49 - 222
Target Start/End: Original strand, 17000779 - 17000948
Alignment:
Q  49 aaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaa-ttttgatgatgtagtgtg 147  Q
    ||||||||||||||||  ||||| ||| ||||    ||| ||||||||||||||||||||||||||  ||||||||| |   ||||||  ||||  ||||    
T  17000779 aaaatattccgctgcagatttaatgataatttca--aaggatgtttaattaaatagatttttatat--tctatttaaaatggttttgaaaatgtgatgtg 17000874  T
Q  148 acatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    ||||||||||| ||||||||||||||| |||||| | |||||||||||| ||||||||||||||| |||||||||    
T  17000875 acatgcccgtttgggttttactctgat-gttgaattgttattatttaattgattttgggaaacggggtgttacaa 17000948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 221
Target Start/End: Original strand, 26078312 - 26078488
Alignment:
Q  39 tttaagttgaaaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatga 138  Q
    ||||||||||||||||||||||||||| |||||  ||||||||  |||| ||| || |||||||||||||   ||||||||||| ||||||||||||       
T  26078312 tttaagttgaaaaatattccgctgcaaatttaataatgatttt--gaaggatgatt-attaaatagattt---tatattctattaaagaaattttgaatt 26078405  T
Q  139 tgtagtgtgacatgcccgttggggttttactctgattgttgaaatatta-ttatttaatggattttgggaaacggtgtgttaca 221  Q
     | ||||||||||||||||| ||| || ||||||| ||||||||||||| ||||| |||   ||||||| ||||| ||||||||    
T  26078406 gggagtgtgacatgcccgtttgggattcactctga-tgttgaaatattatttattaaattacttttgggtaacggggtgttaca 26078488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 223
Target Start/End: Complemental strand, 14479982 - 14479862
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaa 195  Q
    ||||||||||||||   |||||||||||||||||||||||  ||||||||||||||||||||| ||| ||||||||||||     |  ||||| ||||||    
T  14479982 attaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggatttactctgatt----tataattatcatttaa 14479890  T
Q  196 tggattttgggaaacggtgtgttacaaa 223  Q
    | ||||||||| ||||| ||||||||||    
T  14479889 ttgattttgggcaacggggtgttacaaa 14479862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 4169997 - 4169877
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaa 195  Q
    ||||||||||||||   |||||||||||||||||||||||  ||||||||||||||||||||| |||| ||||||||||   |||   ||||||| ||||    
T  4169997 attaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggtattactctgatgcatga---attattaattaa 4169904  T
Q  196 tgga-ttttgggaaacggtgtgttaca 221  Q
    | || ||||||||||||| ||||||||    
T  4169903 ttgatttttgggaaacggggtgttaca 4169877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 16750347 - 16750270
Alignment:
Q  144 tgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    ||||||||| |||||||||||||||||||||  ||||| |||||||||||||| ||||||||||||||| |||||||||    
T  16750347 tgtgacatgaccgttggggttttactctgata-ttgaattattattatttaattgattttgggaaacggggtgttacaa 16750270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 55503814 - 55503934
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaa 195  Q
    ||||||||||||||   |||||||||||||||||||||||  ||||||||||||||||||||| |||  ||||||||||   |||   ||||||| ||||    
T  55503814 attaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatga---attattaattaa 55503907  T
Q  196 tgga-ttttgggaaacggtgtgttaca 221  Q
    |||| ||||||||||||| ||||||||    
T  55503908 tggatttttgggaaacggggtgttaca 55503934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 221
Target Start/End: Complemental strand, 30395593 - 30395470
Alignment:
Q  98 taaatagatttttatatattctatttaagaaattttg-atgatgtagtgtgacatgcccgttggggttttactctgattgttgaaat-attattatttaa 195  Q
    ||||||||||||  ||||||||||||||||||||||| |  ||||||||||||||||| ||| |||||||||||||| ||||||| | ||||||||||||    
T  30395593 taaatagattttcttatattctatttaagaaattttgaaaaatgtagtgtgacatgcctgtt-gggttttactctga-tgttgaattaattattatttaa 30395496  T
Q  196 tggattttgggaaacggtgtgttaca 221  Q
    |   ||||||| ||||| ||||||||    
T  30395495 ttacttttgggtaacggggtgttaca 30395470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 89 - 174
Target Start/End: Complemental strand, 12931366 - 12931283
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||| |||||||||  |||||||||||||||||||   |||||||||||||||||||| ||| | |||||||||    
T  12931366 atgtttaattaaatagttttttatat--tctatttaagaaattttgaaattgtagtgtgacatgcccgtttgggatatactctgat 12931283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 158
Target Start/End: Complemental strand, 14062479 - 14062376
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||| |||||||||||  |||| ||||||||||  ||| ||||||| ||||||||||||||||||  |||||||||||||||||||  ||||||||||||    
T  14062479 aaattttccgctgcaaaattaatgatgattttg--aaggatgttta-ttaaatagatttttatat--tctatttaagaaattttgaaaatgtagtgtgac 14062385  T
Q  150 atgcccgtt 158  Q
    ||| |||||    
T  14062384 atgtccgtt 14062376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 31132425 - 31132545
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaa 195  Q
    ||||||||||||||   |||||||||||||||||||||||  ||||||||||||||||||||| |||  ||||||||||   |||   ||||||| ||||    
T  31132425 attaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatga---attattaattaa 31132518  T
Q  196 tgga-ttttgggaaacggtgtgttaca 221  Q
    | || ||||||||||||| ||||||||    
T  31132519 ttgatttttgggaaacggggtgttaca 31132545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 158
Target Start/End: Original strand, 2585813 - 2585884
Alignment:
Q  84 gaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    |||| |||||||||||||||| ||||   |||||||||||||||||||||||  |||||||||||||||||||||    
T  2585813 gaaggatgtttaattaaatagttttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtt 2585884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 41529691 - 41529809
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||| |||||||||||  |||| ||||||||||  ||  ||||||| |||||||||||||   |||||||||||||||||||||||  ||||||||||||    
T  41529691 aaattttccgctgcaaaattaatgatgattttg--aaagatgttta-ttaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgac 41529784  T
Q  150 atgcccgttggggttttactctgat 174  Q
    |||| |||| |||  ||||||||||    
T  41529785 atgctcgtttgggaattactctgat 41529809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 14697707 - 14697645
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| |||  ||||||||||    
T  14697707 tatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgat 14697645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 222
Target Start/End: Complemental strand, 23121134 - 23120993
Alignment:
Q  84 gaagaatgtttaattaaatagatttttat-atattctatttaagaa-attttgatga-tgtagtgtgacatgcccgtt-ggggttttactctgattgttg 179  Q
    |||| |||||| ||||||||||||||| | ||||| |||||||||  ||| | |||| |||  ||||||||||||||| ||||||||||||||||  | |    
T  23121134 gaaggatgttttattaaatagattttttttatattttatttaagatgattattatgaatgtgatgtgacatgcccgtttggggttttactctgata-tgg 23121036  T
Q  180 aaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    |  |||||||||||||| ||||||||||||||| |||||||||    
T  23121035 atttattattatttaattgattttgggaaacggggtgttacaa 23120993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 38982704 - 38982766
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| |||  ||||||||||    
T  38982704 tatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgat 38982766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 158
Target Start/End: Complemental strand, 16220797 - 16220695
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||| |||||||||||  |||| ||||||||||  ||| ||||||| |||||||||||||   |||||||||||||||||||||||  |||||||||||     
T  16220797 aaattttccgctgcaaaattaatgatgattttg--aaggatgttta-ttaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgat 16220704  T
Q  150 atgcccgtt 158  Q
    |||| ||||    
T  16220703 atgctcgtt 16220695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 222
Target Start/End: Complemental strand, 20894433 - 20894272
Alignment:
Q  51 aatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgaca 150  Q
    |||| ||||||||||||||||||||| ||    ||| | ||||||||||||||| ||     |||| ||||||||||||||||||  |||||||||  ||    
T  20894433 aataatccgctgcaagtttaacgatgttt----gaaaattgtttaattaaatagtttc----atatgctatttaagaaattttga--atgtagtgtagca 20894344  T
Q  151 tgcccgttggggttttactctgattgttgaaata-ttattatttaatggattttgggaaacggtgtgttacaa 222  Q
    |||||||| |||||  |||||||| |||||| || ||||||||||||   ||||||| ||||| |||||||||    
T  20894343 tgcccgtttgggttgaactctgat-gttgaattaattattatttaattacttttgggtaacggggtgttacaa 20894272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 219
Target Start/End: Original strand, 42598358 - 42598516
Alignment:
Q  55 ttccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcc 154  Q
    |||||||||||  |||| ||||||||||  ||| ||| ||| |||||||||||||   ||||||||||||||||| |||||  ||||||||||| |||||    
T  42598358 ttccgctgcaaaattaatgatgattttg--aaggatgctta-ttaaatagatttt---atattctatttaagaaaatttgaaaatgtagtgtgatatgcc 42598451  T
Q  155 cgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgtta 219  Q
    |||| |||  ||||||||||   ||     |||||| ||||| ||||||||||||||| ||||||    
T  42598452 cgtttgggaattactctgatgcatgtttatttattaattaattgattttgggaaacggggtgtta 42598516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 221
Target Start/End: Complemental strand, 20888814 - 20888654
Alignment:
Q  51 aatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgaca 150  Q
    |||| ||||||||||||||||||||| ||    ||| | ||||||||||||||| ||     |||| ||||||||||||||||||  |||||||||  ||    
T  20888814 aataatccgctgcaagtttaacgatgttt----gaaaattgtttaattaaatagtttc----atatgctatttaagaaattttga--atgtagtgtagca 20888725  T
Q  151 tgcccgttggggttttactctgattgttgaaat-attattatttaatggattttgggaaacggtgtgttaca 221  Q
    |||||||| |||||  ||||||| ||||||| | |||||||||||||   ||||||| ||||| ||||||||    
T  20888724 tgcccgtttgggttgaactctga-tgttgaattaattattatttaattacttttgggtaacggggtgttaca 20888654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 6136221 - 6136160
Alignment:
Q  222 aagcctagactctgaaacatggattatagcttagagctaattggtttacatttcaaagattc 283  Q
    ||||||||||||||  ||||||||  ||||||||||||||||| || |||||||||||||||    
T  6136221 aagcctagactctggcacatggatcctagcttagagctaattgattcacatttcaaagattc 6136160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 91 - 174
Target Start/End: Complemental strand, 10687575 - 10687495
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||||||||||  ||||||| ||||||||  |  | ||||||||||||||||||| ||||| |||||||||    
T  10687575 gtttaattaaatagatttttatat--tctatttgagaaatttgaaata-gtagtgtgacatgcccgtttgggttatactctgat 10687495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 91 - 174
Target Start/End: Complemental strand, 10901215 - 10901135
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||||||||||  ||||||| ||||||||  |  | ||||||||||||||||||| ||||| |||||||||    
T  10901215 gtttaattaaatagatttttatat--tctatttgagaaatttgaaata-gtagtgtgacatgcccgtttgggttatactctgat 10901135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 899050 - 898975
Alignment:
Q  98 taaatagatttttatatattctattt-aagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||||  ||||||| |||||||||||||   ||||||||||||||||||| |||||  ||||||||    
T  899050 taaatagatttttatat--tctattttaagaaattttgatatagtagtgtgacatgcccgtttgggttgaactctgat 898975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 13451578 - 13451516
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||||   ||||  ||||||||||||||||||||| ||| |||||||||||    
T  13451578 tatattctatttaagaatgcttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 13451516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 18260783 - 18260722
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||| ||| | |||||||||    
T  18260783 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtttgggatatactctgat 18260722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 18270746 - 18270685
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||| ||| | |||||||||    
T  18270746 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtttgggatatactctgat 18270685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 22726588 - 22726648
Alignment:
Q  114 tattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgatt 175  Q
    ||||||||||||||||||||||  | ||||||||||||||||||| | |||| |||||||||    
T  22726588 tattctatttaagaaattttgaaaa-gtagtgtgacatgcccgttcgtgtttaactctgatt 22726648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 33198401 - 33198344
Alignment:
Q  98 taaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    |||||||||||||||||  |||||||||||||||||||| |||||||||  ||||||||||    
T  33198401 taaatagatttttatat--tctatttaagaaattttgat-atgtagtgtagcatgcccgtt 33198344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 221
Target Start/End: Original strand, 37839629 - 37839789
Alignment:
Q  55 ttccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcc 154  Q
    |||||||||||  |||| ||||||||||  ||| ||| ||| |||||||||||||   ||||||||||| ||||| |||||  ||||||||||||||| |    
T  37839629 ttccgctgcaaaattaatgatgattttg--aaggatgctta-ttaaatagatttt---atattctatttgagaaaatttgaaaatgtagtgtgacatgtc 37839722  T
Q  155 cgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    |||| ||   ||||||||||   ||     |||||| ||||| ||||||||||||||| ||||||||    
T  37839723 cgtttggaaattactctgatgcatgtttatttattaattaattgattttgggaaacggggtgttaca 37839789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 37880844 - 37880776
Alignment:
Q  99 aaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactct 171  Q
    ||||||||||||||||  |||||||| ||||||||||  ||||||| ||||||||||||| ||||||||||||    
T  37880844 aaatagatttttatat--tctattta-gaaattttgaaaatgtagtctgacatgcccgtt-gggttttactct 37880776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 40908100 - 40908055
Alignment:
Q  113 atattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||    
T  40908100 atattctatttaagaaattttaaaaatgtagtgtgacatgcccgtt 40908055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 41940003 - 41940059
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgccc 155  Q
    ||||||||||||||   |||||||||||||||||| ||||  ||||||||||||||||||    
T  41940003 attaaatagatttt---atattctatttaagaaatcttgaaaatgtagtgtgacatgccc 41940059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 14485013 - 14484972
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcc 154  Q
    ||||||||||||||||||||||||  |||||||||||||||||    
T  14485013 tatattctatttaagaaattttga-aatgtagtgtgacatgcc 14484972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 14992310 - 14992355
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  14992310 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 14992355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 15005657 - 15005702
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  15005657 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 15005702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Complemental strand, 16484097 - 16484052
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  16484097 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 16484052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 18170386 - 18170447
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||||||||||  | ||||||||||||| ||||| ||| | |||||||||    
T  18170386 tatattctatttaagaaattttga-aaagtagtgtgacatgtccgtttgggatatactctgat 18170447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Complemental strand, 30237237 - 30237192
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  30237237 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 30237192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 174
Target Start/End: Complemental strand, 33096491 - 33096411
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||| ||||||||||||||||  ||||||| |||||| | ||  ||||||||||||||||||||| | |||||||||||||    
T  33096491 atgtttaat-aaatagatttttatat--tctattttagaaatct-gaaaatgtagtgtgacatgcccgtt-gtgttttactctgat 33096411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 174
Target Start/End: Original strand, 46045559 - 46045641
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||| |||||||||||||||  ||||||||||| |||||||||   |||||||  |||||||||| |||||  ||||||||    
T  46045559 atgtttaat-aaatagatttttata--ttctatttaagtaattttgatatagtagtgtagcatgcccgtttgggttgaactctgat 46045641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 2946779 - 2946718
Alignment:
Q  222 aagcctagactctgaaacatggattatagcttagagctaattggtttacatttcaaagattc 283  Q
    |||||||||||||  ||||| ||| |||| |||||||||||||| |  ||||||||||||||    
T  2946779 aagcctagactctagaacatagatcatagtttagagctaattggctcgcatttcaaagattc 2946718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 16151991 - 16151934
Alignment:
Q  106 tttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggt 163  Q
    |||||||||||| |||||||||||||||||    ||||||||||||||| ||| ||||    
T  16151991 tttttatatattatatttaagaaattttgaattagtagtgtgacatgcctgtttgggt 16151934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 16156137 - 16156080
Alignment:
Q  106 tttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggt 163  Q
    |||||||||||| |||||||||||||||||    ||||||||||||||| ||| ||||    
T  16156137 tttttatatattatatttaagaaattttgaattagtagtgtgacatgcctgtttgggt 16156080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 174
Target Start/End: Complemental strand, 15406466 - 15406347
Alignment:
Q  49 aaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtga 148  Q
    |||||||||||||||||||| || |||||||||  |||| |||| | |||||||||||||   |||||| ||||||  |||||||||    | |||||||    
T  15406466 aaaatattccgctgcaagttaaatgatgatttt--gaaggatgtgt-attaaatagattt---tatattatatttacaaaattttgaattagaagtgtga 15406373  T
Q  149 catgcccgttggggttttactctgat 174  Q
    ||||||| ||||| |  |||||||||    
T  15406372 catgcccattgggttaatactctgat 15406347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1405 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold1405
Description:

Target: scaffold1405; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 29 - 221
Target Start/End: Complemental strand, 1699 - 1504
Alignment:
Q  29 ttggagtttatttaagttgaaaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatt--tttatatattctatttaag 126  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||  |||||||||||||||||||    
T  1699 ttggagtttatttaagttgaaaaatattccgctgcaagtttaatgatggttttgtgaagaatgtttaattaaatagatttgtttatatattctatttaag 1600  T
Q  127 aaattttgatgatgtagtgtgacatgcccg-ttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||| ||||||| | ||||||||    
T  1599 aaattttgatgatgtagtgtgacatgcccgtttgggtttttactctgattgttgaaatattattatttaattgatttcgggaaacagggtgttaca 1504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 28 - 222
Target Start/End: Original strand, 458 - 654
Alignment:
Q  28 gttggagtttatttaagttgaaaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaaga 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||  || ||||||||||||||||| ||||||||||||||||||||| |    
T  458 gttggagtttatttaagttgaaaaatattccgctgcaagtttaacgttgtttttatgatgaatgtttaattaaataaatttttatatattctatttaaaa 557  T
Q  128 aa--ttttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    ||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||    
T  558 aaaattctgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatatgattatttaattgattttgggaaacggggtgttacaa 654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 142; Significance: 1e-74; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 29 - 221
Target Start/End: Original strand, 494569 - 494766
Alignment:
Q  29 ttggagtttatttaagttgaaaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagattttt-----atatattctattt 123  Q
    ||||||||||||| |||||||||||||||||||||| |||||| |||| ||||| |||||||||||||||||||||||||||     |||||||||||||    
T  494569 ttggagtttattttagttgaaaaatattccgctgcatgtttaatgatggttttgtgaagaatgtttaattaaatagattttttttatatatattctattt 494668  T
Q  124 aagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  494669 aagaaattttgatgacgtagtgtgacatgcccgtttgggttttactctgattgttgaaatattattatttaattgattttgggaaacggggtgttaca 494766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 95352 - 95307
Alignment:
Q  113 atattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||    
T  95352 atattctatttgagaaattttgaaaatgtagtgtgacatgcccgtt 95307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 452424 - 452485
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||||||||| |  | ||||||||||||||||||| ||| | |||||||||    
T  452424 tatattctatttaagaaattttaaaaa-gtagtgtgacatgcccgtttgggatatactctgat 452485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 141; Significance: 6e-74; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 29 - 221
Target Start/End: Original strand, 14321177 - 14321369
Alignment:
Q  29 ttggagtttatttaagttgaaaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaa 128  Q
    |||||||||| ||||||||||||||||||||||||||| |||| || ||||||| |||||||||| ||||||||||||||||||||||| ||||||||||    
T  14321177 ttggagtttaattaagttgaaaaatattccgctgcaagcttaatgacgattttgtgaagaatgttgaattaaatagatttttatatattttatttaagaa 14321276  T
Q  129 attttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    |||||||||| |||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||    
T  14321277 attttgatgacgtagtgtgacatacccgtttgggttttactctgattgctgaaatattattatttaattgattttgggaaacggggtgttaca 14321369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 53 - 222
Target Start/End: Complemental strand, 15338401 - 15338235
Alignment:
Q  53 tattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatg 152  Q
    ||||||||| ||||||||| ||||| ||| | ||| ||||||||||||||||||||||||||||||||||||||||| |||||   ||||||||||||||    
T  15338401 tattccgctacaagtttaatgatgaattttg-aaggatgtttaattaaatagatttttatatattctatttaagaaa-tttgaaattgtagtgtgacatg 15338304  T
Q  153 cccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    ||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||| |||||||||    
T  15338303 cccgttggggttttactctga-tgttgaaaaattattatttaattgattttgggaaacggggtgttacaa 15338235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 31153935 - 31153741
Alignment:
Q  28 gttggagtttatttaagttgaaaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaaga 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||   | | ||||| ||| | |||| ||||||||||||||||||||||||    
T  31153935 gttggagtttatttaagttgaaaaatattccgctgcaagtttaacgttgattaatg-atgaatgattagtcaaattgatttttatatattctatttaaga 31153837  T
Q  128 aattttgatgatgtagtgtgacatgcccgttggggttttactctga--ttgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
     |||||||||| ||| ||||||||||||||||||||||||||||||  |||||||||||| ||  ||||   ||||||||||||||| ||||||||    
T  31153836 gattttgatgacgtaatgtgacatgcccgttggggttttactctgattttgttgaaatataatattttatatgattttgggaaacggggtgttaca 31153741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 53 - 223
Target Start/End: Original strand, 15723817 - 15723985
Alignment:
Q  53 tattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatg 152  Q
    ||||||||||||||||||| ||||| ||| | ||| |||||||||||||||||||||||||| |||||||||||||||||  |   ||||||||||||||    
T  15723817 tattccgctgcaagtttaatgatgaattttg-aaggatgtttaattaaatagatttttatatgttctatttaagaaatttgaaaattgtagtgtgacatg 15723915  T
Q  153 cccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaaa 223  Q
    ||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||  ||||||||||    
T  15723916 cccgttggggttttactctga-tgttgaaaaattattatttaattgattttgggaaacgtggtgttacaaa 15723985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 53 - 222
Target Start/End: Original strand, 15711592 - 15711758
Alignment:
Q  53 tattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatg 152  Q
    ||||||||||||||||||| ||||| ||| | ||| |||||||||||||||||||||||||| |||||||||||||| |||||   ||||||||||||||    
T  15711592 tattccgctgcaagtttaatgatgaattttg-aaggatgtttaattaaatagatttttatatgttctatttaagaaa-tttgaaattgtagtgtgacatg 15711689  T
Q  153 cccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    ||||||||||||||||||||| |||||||| ||||||||||||| |||||| |||||| | |||||||||    
T  15711690 cccgttggggttttactctga-tgttgaaaaattattatttaattgattttaggaaacagggtgttacaa 15711758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 49 - 158
Target Start/End: Complemental strand, 6411388 - 6411284
Alignment:
Q  49 aaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtga 148  Q
    |||||||||||||||||||| || ||||||||||  ||| |||||||||||||||||||||   |||||||||||||||||||||||   ||||||||||    
T  6411388 aaaatattccgctgcaagttaaatgatgattttg--aaggatgtttaattaaatagatttt---atattctatttaagaaattttgaaattgtagtgtga 6411294  T
Q  149 catgcccgtt 158  Q
    ||||||||||    
T  6411293 catgcccgtt 6411284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 35963349 - 35963517
Alignment:
Q  49 aaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaa-ttttgatgatgtagtgtg 147  Q
    ||||||||||||||||  ||||| ||| |||| |  ||| ||||||||||||||||||||||||||  ||||||||| |   ||||||  ||||  ||||    
T  35963349 aaaatattccgctgcagatttaatgataatttcg--aaggatgtttaattaaatagatttttatat--tctatttaaaatggttttgaaaatgtgatgtg 35963444  T
Q  148 acatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    ||||||||||| |||||||||||||| ||||||| | |||| ||||||| ||||||||||||||| ||||||||    
T  35963445 acatgcccgtttgggttttactctga-tgttgaattgttataatttaattgattttgggaaacggggtgttaca 35963517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 223
Target Start/End: Complemental strand, 10305488 - 10305321
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||| |||||||||||  |||| ||||||||||  ||| || |||| |||||||||||||   |||||||||||||||||||||||  ||||||||||||    
T  10305488 aaattttccgctgcaaaattaatgatgattttg--aaggattttta-ttaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgac 10305395  T
Q  150 atgcccgttggggttttactctgattgttgaaat-attattatttaatggattttgggaaacggtgtgttacaaa 223  Q
    ||||||||| |||  ||||||||| ||||||| | |||||||||||||   ||||||| ||||| ||||||||||    
T  10305394 atgcccgtttgggaattactctga-tgttgaattaattattatttaattacttttgggtaacggggtgttacaaa 10305321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 50 - 222
Target Start/End: Original strand, 10306040 - 10306206
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||| |||||||||||  |||| ||||||||||  ||| || |||| |||||||||||||   |||||||||||||||||||||||  ||||||||||||    
T  10306040 aaattttccgctgcaaaattaatgatgattttg--aaggatattta-ttaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgac 10306133  T
Q  150 atgcccgttggggttttactctgattgttgaaat-attattatttaatggattttgggaaacggtgtgttacaa 222  Q
    ||||||||| |||  ||||||||| ||||||| | |||||||||||||   ||||||| ||||| |||||||||    
T  10306134 atgcccgtttgggaattactctga-tgttgaattaattattatttaattacttttgggtaacggagtgttacaa 10306206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 49 - 174
Target Start/End: Original strand, 36306720 - 36306840
Alignment:
Q  49 aaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtga 148  Q
    ||||||||||||| |||||| || ||||||||||  ||| |||||||||||||||||||||  |||||||||||||||||| ||| | | ||||||||||    
T  36306720 aaaatattccgctacaagttaaatgatgattttg--aaggatgtttaattaaatagatttt--tatattctatttaagaaa-tttaaagttgtagtgtga 36306814  T
Q  149 catgcccgttggggttttactctgat 174  Q
    |||||||||| |||  ||||||||||    
T  36306815 catgcccgtttgggaattactctgat 36306840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 55 - 223
Target Start/End: Original strand, 11395316 - 11395478
Alignment:
Q  55 ttccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcc 154  Q
    |||||||||||  |||| ||||||||||  ||| ||| ||| |||||||||||||   ||||||||||||||||| |||||  |||||||||||||||||    
T  11395316 ttccgctgcaaaattaatgatgattttg--aaggatgctta-ttaaatagatttt---atattctatttaagaaaatttgaaaatgtagtgtgacatgcc 11395409  T
Q  155 cgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaaa 223  Q
    |||| |||  ||||||||||   ||    ||||||| ||||| ||||||||||||||| ||||||||||    
T  11395410 cgtttgggaattactctgatgcatgtttaattattaattaattgattttgggaaacggggtgttacaaa 11395478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 125258 - 125378
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaa 195  Q
    ||||||||||||||   |||||||||||||||||||||||  ||||||||||||||||||||| |||  ||||||||||   |||   ||||||| ||||    
T  125258 attaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatga---attattaattaa 125351  T
Q  196 tgga-ttttgggaaacggtgtgttaca 221  Q
    |||| ||||||||||||| ||||||||    
T  125352 tggatttttgggaaacggggtgttaca 125378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 223
Target Start/End: Original strand, 3290426 - 3290561
Alignment:
Q  84 gaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccg-ttggggttttactctgat-tgttgaa 181  Q
    |||| |||||||||||||||| ||||   |||||||||||||||||||||||  ||||||||||||||||||| || ||| | ||||||||| |||| |     
T  3290426 gaaggatgtttaattaaatagttttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgttttgggatatactctgatgtgttta- 3290521  T
Q  182 atattattatttaatggattttgggaaacggtgtgttacaaa 223  Q
       |||||||||||| ||||||||| ||||| ||||||||||    
T  3290522 --tttattatttaattgattttgggtaacggggtgttacaaa 3290561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 16952966 - 16953087
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaat-attattattta 194  Q
    ||||||||||||||   |||||||||||||||||||||||  |||||||||||||||||||||  ||||||||||||| ||||||| | |||| ||||||    
T  16952966 attaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtt-aggttttactctga-tgttgaattaattagtattta 16953060  T
Q  195 atggattttgggaaacggtgtgttaca 221  Q
    ||   ||||||| ||||| ||||||||    
T  16953061 attacttttgggtaacggggtgttaca 16953087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 46349370 - 46349487
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||||||||||||||| || || ||||||||||  ||  ||||||| |||||||| ||||   |||||||||||||||||||||||  ||||||||||||    
T  46349370 aaatattccgctgcaaatt-aatgatgattttg--aaagatgttta-ttaaatagttttt---atattctatttaagaaattttgaaaatgtagtgtgac 46349462  T
Q  150 atgcccgttggggttttactctgat 174  Q
    ||||||||| ||| |||||||||||    
T  46349463 atgcccgtttgggatttactctgat 46349487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 3327231 - 3327169
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| ||| |||||||||||    
T  3327231 tatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 3327169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 15086733 - 15086794
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||    
T  15086733 tatattctatttaagaaattttgaaaatgtagtgtgacatgcccgttgggg-tttactctgat 15086794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 21744434 - 21744554
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaa 195  Q
    ||||||||||||||   |||||||||||||||||||||||  ||||||||||||||||||||| |||  ||||||||||   |||   ||||||| ||||    
T  21744434 attaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatga---attattaattaa 21744527  T
Q  196 tgga-ttttgggaaacggtgtgttaca 221  Q
    | || ||||||||||||| ||||||||    
T  21744528 ttgatttttgggaaacggggtgttaca 21744554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 174
Target Start/End: Complemental strand, 16185156 - 16185044
Alignment:
Q  56 tccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgccc 155  Q
    ||||||||||  |||| ||| ||||||  ||| ||||||| |||||||||||||   |||||||||||||||||||||||  ||||||||||||||||||    
T  16185156 tccgctgcaaaattaatgataattttg--aaggatgttta-ttaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgccc 16185063  T
Q  156 gttggggttttactctgat 174  Q
    ||| |||  ||||||||||    
T  16185062 gtttgggaattactctgat 16185044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 16946379 - 16946485
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaat-attattatttaatggattttgggaaac 210  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||| |||||||||||||| ||||||| | |||| ||||||||  | |||||| |||    
T  16946379 tatattctatttaagaaattttgaaaatgtagtgtaacatgcccgtt-gggttttactctga-tgttgaattaattagtatttaattaaatttgggtaac 16946476  T
Q  211 ggtgtgtta 219  Q
    || ||||||    
T  16946477 ggggtgtta 16946485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 221
Target Start/End: Original strand, 20907991 - 20908163
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatat--attctatttaagaaattttgatgatgtagtgtg 147  Q
    |||||||||||||| ||||||| ||  |||||| |||  | |||| |||||||||||||||||||  | |||||||| |||||||| |||| | | ||||    
T  20907991 aaatattccgctgcgagtttaatgacaattttgtgaatgacgtttgattaaatagatttttatatacactctatttaggaaattttaatgaagaaatgtg 20908090  T
Q  148 acatgcccgttggggttttactctgattgttgaaatattatta-tttaatggattttgggaaacggtgtgttaca 221  Q
     ||||||||| | |    |||||||||| ||||  |||||||| |||||| ||||||||||||||| ||||||||    
T  20908091 gcatgcccgtagtg--aatactctgattattgatgtattattattttaattgattttgggaaacggggtgttaca 20908163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 1612091 - 1612017
Alignment:
Q  146 tgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    |||||||| ||||  |||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||||||||    
T  1612091 tgacatgctcgtttaggttttactctgat-gttgaattattattatttaattgattttgggaaacggggtgttaca 1612017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 222
Target Start/End: Complemental strand, 38827209 - 38827090
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaa 195  Q
    ||||||||||||||   ||||||||||||| |||||||||  ||||||||||||||||||||| |||  |||||||||    || |   |||||| ||||    
T  38827209 attaaatagatttt---atattctatttaacaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctga----tgcatgtttattaattaa 38827117  T
Q  196 tggattttgggaaacggtgtgttacaa 222  Q
    | ||||||||||||||| |||||||||    
T  38827116 ttgattttgggaaacggggtgttacaa 38827090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 18959178 - 18959239
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||||| |||||||||||||||    
T  18959178 tatattctatttaagaa-ttttgaaaatgtagtgtgacatgcccgtttgggttttactctgat 18959239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 10308669 - 10308775
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacg 211  Q
    |||||||||||||| |||||||||  ||||||||||||||||||||| |||  |||||||||    || |   |||||| ||||| ||||||||||||||    
T  10308669 tatattctatttaacaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctga----tgcatgtttattaattaattgattttgggaaacg 10308764  T
Q  212 gtgtgttacaa 222  Q
    | |||||||||    
T  10308765 gggtgttacaa 10308775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 8775295 - 8775236
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||   |||||||||||||||||||||||  |||||||||||||||||||||    
T  8775295 attaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtt 8775236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 174
Target Start/End: Original strand, 21232690 - 21232765
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||   |||||||||||| ||||||||||  ||||||||||||||||||||| |||  ||||||||||    
T  21232690 attaaatagatttt---atattctatttacgaaattttgaatatgtagtgtgacatgcccgtttgggaattactctgat 21232765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Complemental strand, 4279406 - 4279325
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||  |||||||| ||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||    
T  4279406 gtttaattaaatag--ttttatat-ttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 4279325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Complemental strand, 19615738 - 19615657
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||  |||||||| ||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||    
T  19615738 gtttaattaaatag--ttttatat-ttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 19615657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 15438294 - 15438356
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||||||||||   | ||||||||||||||||||| ||| | |||||||||    
T  15438294 tatattctatttaagaaattttggaaaagtagtgtgacatgcccgtttgggatatactctgat 15438356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 174
Target Start/End: Original strand, 26295454 - 26295535
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||| ||||||||||||||||  ||||||| |||||||||||    ||||||||||||||||||| ||||| |||||||||    
T  26295454 atgtttaat-aaatagatttttatat--tctattttagaaattttgaaatagtagtgtgacatgcccgtt-gggttgtactctgat 26295535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 32770848 - 32770786
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||||   ||||  ||||||||||||||||||||| ||| |||||||||||    
T  32770848 tatattctatttaagaatgcttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 32770786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 37245055 - 37245115
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||| || ||||||||||||    
T  37245055 tatattctattta-gaaattttgaaaatgtagtgtgacatgcccgtt-ggattttactctgat 37245115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 175
Target Start/End: Complemental strand, 11308453 - 11308393
Alignment:
Q  114 tattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgatt 175  Q
    ||||||||||||||||||||||  | ||||||||||||||||||| | |||| |||||||||    
T  11308453 tattctatttaagaaattttgaaaa-gtagtgtgacatgcccgttcgtgtttaactctgatt 11308393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 175
Target Start/End: Complemental strand, 11311761 - 11311701
Alignment:
Q  114 tattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgatt 175  Q
    ||||||||||||||||||||||  | ||||||||||||||||||| | |||| |||||||||    
T  11311761 tattctatttaagaaattttgaaaa-gtagtgtgacatgcccgttcgtgtttaactctgatt 11311701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 12684703 - 12684763
Alignment:
Q  114 tattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgatt 175  Q
    ||||||||||||||||||||||  | ||||||||||||||||||| | |||| |||||||||    
T  12684703 tattctatttaagaaattttgaaaa-gtagtgtgacatgcccgttcgtgtttaactctgatt 12684763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 158
Target Start/End: Complemental strand, 4988425 - 4988322
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaag-aaattttgatgatgtagtgtga 148  Q
    |||| ||||||||||| ||||| ||||| ||||  ||||| ||||| |||||||||||||   |||||||||||||| |||||||||  ||| |||| ||    
T  4988425 aaattttccgctgcaaatttaatgatgactttg--aagaacgttta-ttaaatagatttt---atattctatttaagaaaattttgaaaatgaagtggga 4988332  T
Q  149 catgcccgtt 158  Q
    ||||||||||    
T  4988331 catgcccgtt 4988322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 12546670 - 12546608
Alignment:
Q  112 tatattctatttaagaaa-ttttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||||| ||||||  | ||||||||||||||||||| ||| |||||||||||    
T  12546670 tatattctatttaagaaaattttgaaaa-gtagtgtgacatgcccgtttgggatttactctgat 12546608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 174
Target Start/End: Original strand, 16188409 - 16188491
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||| |||||||||| ||||   ||||||||||||||||| |||||    ||||||||||||| ||||| ||| |||||||||||    
T  16188409 atgttcaattaaatagttttt---atattctatttaagaaaatttgaaatagtagtgtgacatgtccgtttgggatttactctgat 16188491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 4021 - 4082
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||| | ||||||| |  ||||||||||||||||||||| |||||| ||||||||    
T  4021 tatattctattttataaatttttaaaatgtagtgtgacatgcccgtt-gggtttcactctgat 4082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 11882201 - 11882262
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||| |||||||||||||||||||  | ||||||||||||||||||| ||| | |||||||||    
T  11882201 tataatctatttaagaaattttgaaaa-gtagtgtgacatgcccgtttgggatatactctgat 11882262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Complemental strand, 12694091 - 12694046
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  12694091 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 12694046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 15098636 - 15098681
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  15098636 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 15098681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 155
Target Start/End: Original strand, 16928296 - 16928359
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgccc 155  Q
    ||||||||| |||||||||||| |||||||||||| ||||| |||||  ||||||||||||||||||    
T  16928296 atgtttaat-aaatagattttt-tatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 16928359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Complemental strand, 46624350 - 46624305
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  46624350 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 46624305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 13005806 - 13005758
Alignment:
Q  106 tttttatatattctatttaagaaattttgatgatgtagtgtgacatgccc 155  Q
    |||||||||||||||||| ||||| |||||  ||||||||||||||||||    
T  13005806 tttttatatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 13005758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 14145928 - 14145891
Alignment:
Q  185 ttattatttaatggattttgggaaacggtgtgttacaa 222  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  14145928 ttattatttaattgattttgggaaacggggtgttacaa 14145891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 158
Target Start/End: Complemental strand, 4992523 - 4992420
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaag-aaattttgatgatgtagtgtga 148  Q
    |||| ||||||||||| ||||| ||||| ||||  ||| | ||||| |||||||||||||   |||||||||||||| |||||||||  ||| |||| ||    
T  4992523 aaattttccgctgcaaatttaatgatgactttg--aaggacgttta-ttaaatagatttt---atattctatttaagaaaattttgaaaatgaagtggga 4992430  T
Q  149 catgcccgtt 158  Q
    ||||||||||    
T  4992429 catgcccgtt 4992420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 14946476 - 14946535
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||   ||||||||||| |||||||||||    |||||||||||||||||||    
T  14946476 attaaatagatttt---atattctatttgagaaattttgaattagtagtgtgacatgcccgtt 14946535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 15374069 - 15374128
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||   ||||||||||| |||||||||||    |||||||||||||||||||    
T  15374069 attaaatagatttt---atattctatttgagaaattttgaattagtagtgtgacatgcccgtt 15374128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 138; Significance: 4e-72; HSPs: 4)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 71835 - 71642
Alignment:
Q  29 ttggagtttatttaagttgaaaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaa 128  Q
    |||| ||||||||||||||||||||||||||||| |||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  71835 ttggggtttatttaagttgaaaaatattccgctgtaagtttaatgttgattttgtgaagaatgtttaattaaatagatttttatatattctatttaagaa 71736  T
Q  129 attttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||||| ||| ||||||||||||| | ||||||||||||| | |||||||||    
T  71735 attttgataatgtagtgtcacatgcccgtttgggttttactctgattgctgagatattattatttagttgattttgggaaacagggtgttacaa 71642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 103 - 221
Target Start/End: Complemental strand, 50495 - 50377
Alignment:
Q  103 agatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattt 202  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | |||||    
T  50495 agatttttatatattctatttaagagattttgataatgtagtgtgacatgcccgtttgggttttactctgattgctgagatattattatttagttgattt 50396  T
Q  203 tgggaaacggtgtgttaca 221  Q
    |||||||||| ||||||||    
T  50395 tgggaaacggggtgttaca 50377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 18209 - 18271
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||||| ||| |  ||||||||||||||||||||| ||| |||||||||||    
T  18209 tatattctatttaagaaaatttaaaaatgtagtgtgacatgcccgtttgggatttactctgat 18271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 174
Target Start/End: Original strand, 7322 - 7404
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||| | ||||   ||||||||||||||||| |||||  | | ||||||||||||||||| ||| |||||||||||    
T  7322 atgtttaattaaattgttttt---atattctatttaagaaaatttgaaaacgaagtgtgacatgcccgtttgggatttactctgat 7404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 29 - 221
Target Start/End: Original strand, 11981 - 12173
Alignment:
Q  29 ttggagtttatttaagttgaaaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaa 128  Q
    ||||||||||||||||||||||||||||||||||||||||||| || | ||||| ||||||| ||||||||||||||||||||||||||||||| |||||    
T  11981 ttggagtttatttaagttgaaaaatattccgctgcaagtttaatgagggttttgtgaagaatatttaattaaatagatttttatatattctattaaagaa 12080  T
Q  129 attttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    ||||||| |||||||||||||||||||||| |||||||||| | |||| ||||||||||||||||||| ||||||||||||| | ||||||||    
T  12081 attttgaagatgtagtgtgacatgcccgtttgggttttactataattgctgaaatattattatttaattgattttgggaaacagggtgttaca 12173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 119; Significance: 8e-61; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 4780 - 4972
Alignment:
Q  29 ttggagtttatttaagttgaaaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaa 128  Q
    ||||||||||| |||||||| ||||||||||||||||||||||  | | ||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  4780 ttggagtttatctaagttgataaatattccgctgcaagtttaataaag-ttttgtgaagaatgtttaattaaatagatttttatatattctatttaaaaa 4878  T
Q  129 attttgatgatgtagtgtgacatgcccgttggggttttactctga-ttgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
     ||||||||| ||||||||||||||||||| |||||||||||||| || |||||||||||||||||||| ||||||| ||||||| |||||||||    
T  4879 gttttgatgacgtagtgtgacatgcccgtt-gggttttactctgatttattgaaatattattatttaattgattttgagaaacggggtgttacaa 4972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 9944 - 9755
Alignment:
Q  28 gttggagtttatttaagttgaaaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaaga 127  Q
    ||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||  ||| |||||||||||||||||||||||||||||||||||||||    
T  9944 gttggagattaattaagttgaaaaatattccgctgcaagtttaatgatgattttg--aaggatgtttaattaaatagatttttatatattctatttaaga 9847  T
Q  128 aattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    ||||| ||   | |||||||||||  ||||| ||||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||||||||    
T  9846 aattt-gaaattatagtgtgacatatccgtttgggttttactctgat-gttgaattattattatttaattgattttgggaaacggggtgttaca 9755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 58 - 222
Target Start/End: Complemental strand, 194662 - 194501
Alignment:
Q  58 cgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgt 157  Q
    |||||||||||||| ||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||   |||||||||||||||||||    
T  194662 cgctgcaagtttaatgatgaattttg-aagaatgtttaattaaatagatttttatatattctatttaagaaa-tttgaaattgtagtgtgacatgcccgt 194565  T
Q  158 tggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    |||||||||||||||| |||||||| ||||||||||||| ||||||||||||||| |||||||||    
T  194564 tggggttttactctga-tgttgaaaaattattatttaattgattttgggaaacggggtgttacaa 194501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 154
Target Start/End: Complemental strand, 136941 - 136843
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    ||||||||||||||||  |||| |||||| |||  ||| ||||||| |||||||||||||   |||||||||||||||||||||||  ||||||||||||    
T  136941 aaatattccgctgcaaaattaatgatgatcttg--aaggatgttta-ttaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgac 136848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 15406 - 15603
Alignment:
Q  28 gttggagtttatttaagttgaaaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaataga---tttttatatattctattta 124  Q
    |||||||||||||||||||||||||||| |||||||||| |||||| || |||   || ||||| ||| | |||||||   |||||||||||||||||||    
T  15406 gttggagtttatttaagttgaaaaatatcccgctgcaagattaacgttg-tttaatgatgaatgattactcaaatagattttttttatatattctattta 15504  T
Q  125 agaaattttgatgatgtagtgtgacatgcccgttggggttttactctga--ttgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    ||| |||||||||| ||| ||||||||||||||||||||||||||||||  |||||||||||| ||  ||||   ||||||||||||||| ||||||||    
T  15505 agagattttgatgacgtaatgtgacatgcccgttggggttttactctgattttgttgaaatataatattttatatgattttgggaaacggggtgttaca 15603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 8403 - 8466
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggtt-ttactctgat 174  Q
    ||||| |||||||||||| |||||  ||| ||||||||||||||||| ||||| ||||||||||    
T  8403 tatatcctatttaagaaaatttgaaaatgaagtgtgacatgcccgtttgggttattactctgat 8466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 80; Significance: 1e-37; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 84 - 221
Target Start/End: Original strand, 21093 - 21228
Alignment:
Q  84 gaagaatgtttaattaaatagatttttatatattctatttaagaaa-ttttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaa 182  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||| ||||||  ||||||||||||||||| ||| ||||||||||||||| ||||||     
T  21093 gaaggatgtttaattaaatagatttttatat--tctatttaagaaaattttgaaaatgtagtgtgacatgcctgtttgggttttactctgat-gttgaat 21189  T
Q  183 tattattatttaatggattttgggaaacggtgtgttaca 221  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  21190 tattattatttaattgattttgggaaacggggtgttaca 21228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 131943 - 131865
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaa 128  Q
    |||||||||||||| |||| || ||  |||||| |||  | |||| ||||||||||||||||||||||||| |||||||    
T  131943 aaatattccgctgcgagttaaatgacaattttgtgaatgacgtttgattaaatagatttttatatattctaattaagaa 131865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 1830 - 1890
Alignment:
Q  149 catgcccgttggggttttactctgattgttg-aaatattattatttaatggattttgggaaa 209  Q
    ||||||||||||||||| ||||||| ||||| |||||||||||||| || ||||||||||||    
T  1830 catgcccgttggggtttcactctga-tgttgaaaatattattattttattgattttgggaaa 1890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 60 - 221
Target Start/End: Original strand, 3707371 - 3707528
Alignment:
Q  60 ctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttg 159  Q
    |||||||||||| ||||| ||| | | | ||||||||||||||||||||| |||||||||||||||||||||| ||   ||||||||||||||||||||     
T  3707371 ctgcaagtttaatgatgaattttg-atggatgtttaattaaatagatttt-atatattctatttaagaaattt-gaaattgtagtgtgacatgcccgttt 3707467  T
Q  160 gggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    |||||||||||||| |||||||| ||||||||||||| ||||||||||||| | ||||||||    
T  3707468 gggttttactctga-tgttgaaaaattattatttaattgattttgggaaactgggtgttaca 3707528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 221
Target Start/End: Complemental strand, 20242098 - 20241932
Alignment:
Q  51 aatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaa-attttgatgatgtagtgtgac 149  Q
    |||||| |||||||  ||||| ||| ||||||  ||| |||||||||||||||||||||||| |  |||||||||||| |||||||  ||||  ||||||    
T  20242098 aatatttcgctgcagatttaatgataattttg--aaggatgtttaattaaatagatttttatgt--tctatttaagaagattttgaaaatgtgatgtgac 20242003  T
Q  150 atgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    ||||||||| ||||||||||||||| |||||| |||||||||||||| |||||||||||| || ||||||||    
T  20242002 atgcccgtttgggttttactctgat-gttgaattattattatttaattgattttgggaaatggggtgttaca 20241932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 222
Target Start/End: Original strand, 23067314 - 23067484
Alignment:
Q  49 aaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttat-atattctatttaagaa-attttgatgatgtagtgt 146  Q
    ||||||||||||||||||||||| ||||||||   |||| ||||| |||||||||||||||| | |||||||||||| ||  |||||||  ||||  |||    
T  23067314 aaaatattccgctgcaagtttaatgatgattt---gaaggatgtt-aattaaatagattttttttatattctatttatgatgattttgaaaatgtgatgt 23067409  T
Q  147 gacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    ||||||||||||  |||||||||||||| | |||| ||||||| |||||| ||||||||||||||| |||||||||    
T  23067410 gacatgcccgtttaggttttactctgat-gatgaattattattgtttaattgattttgggaaacggggtgttacaa 23067484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 955654 - 955822
Alignment:
Q  49 aaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaaga-aattttgatgatgtagtgtg 147  Q
    ||||||||||||||||  ||||| ||| |||| |  ||| |||||||||||||||||||||  |||||||||||||| |  |||||||  ||||  ||||    
T  955654 aaaatattccgctgcagatttaatgataatttcg--aaggatgtttaattaaatagatttt--tatattctatttaaaatgattttgaaaatgtgatgtg 955749  T
Q  148 acatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    ||||||| ||| |||||||||||||| ||||||| | |||||||||||| |||||||| |||||| ||||||||    
T  955750 acatgccggtttgggttttactctga-tgttgaattgttattatttaattgattttggaaaacggggtgttaca 955822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 222
Target Start/End: Complemental strand, 19858725 - 19858560
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||||||||||||||| || || ||||||||||  ||| ||||||| |||||||| ||||   ||||||||||| |||||||||||  ||||||||||||    
T  19858725 aaatattccgctgcaaatt-aatgatgattttg--aaggatgttta-ttaaatagttttt---atattctatttcagaaattttgaaaatgtagtgtgac 19858633  T
Q  150 atgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    ||||||||| ||| |||||||||||   ||    ||||||||||||| ||||||||| ||||| |||||||||    
T  19858632 atgcccgtttgggatttactctgatgtatgtttaattattatttaattgattttgggtaacggggtgttacaa 19858560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 23196196 - 23196314
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    ||||||||||||||||  |||| ||||||||||  ||| ||||||| |||||||| ||||   |||||||||||||||||||||||  ||||||||||||    
T  23196196 aaatattccgctgcaaaattaatgatgattttg--aaggatgttta-ttaaatagttttt---atattctatttaagaaattttgaaaatgtagtgtgac 23196289  T
Q  150 atgcccgttggggttttactctgat 174  Q
    ||||||||| ||| |||||||||||    
T  23196290 atgcccgtttgggatttactctgat 23196314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 222
Target Start/End: Original strand, 2341630 - 2341796
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    ||||||||||||||||  |||| |||||| |||  ||  ||||||| |||||||||||||   |||||||||||||||| ||||||  ||||||||||||    
T  2341630 aaatattccgctgcaaaattaatgatgatcttg--aatgatgttta-ttaaatagatttt---atattctatttaagaatttttgaaaatgtagtgtgac 2341723  T
Q  150 atgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    ||||||||| |||  ||||||||||   ||     |||||||| ||| ||||||||||||||| |||||||||    
T  2341724 atgcccgtttgggaattactctgatgcatgtttatttattattaaattgattttgggaaacggggtgttacaa 2341796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 158
Target Start/End: Original strand, 29555053 - 29555155
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||||| |||||||||  |||| ||||||||||  ||| ||||||| |||||||||||||   |||||||||||||||||||||||  ||||||||||||    
T  29555053 aaatataccgctgcaaaattaatgatgattttg--aaggatgttta-ttaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgac 29555146  T
Q  150 atgcccgtt 158  Q
    |||||||||    
T  29555147 atgcccgtt 29555155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 222
Target Start/End: Original strand, 20032610 - 20032772
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||| |||||||||||  |||| ||||||||||  ||| ||||||| |||||||||||||   |||||||||||||||||||||||  || |||||||||    
T  20032610 aaattttccgctgcaaaattaatgatgattttg--aaggatgttta-ttaaatagatttt---atattctatttaagaaattttgaaaatatagtgtgac 20032703  T
Q  150 atgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    ||||||||| | |  |||||||||    || |   |||||| ||||| ||||||||||||||| |||||||||    
T  20032704 atgcccgtttgagaattactctga----tgcatgtttattaattaattgattttgggaaacggggtgttacaa 20032772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 20639766 - 20639704
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||||||| |||||||||||    
T  20639766 tatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgttgggggtttactctgat 20639704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 22448867 - 22449036
Alignment:
Q  49 aaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaa--attttgatgat-gtagtg 145  Q
    ||||||||||||||||  ||||| |||||||||   ||| ||||||||||||||||||||||||||  |||||||||  |  ||| | || || ||  ||    
T  22448867 aaaatattccgctgcagatttaatgatgatttta--aaggatgtttaattaaatagatttttatat--tctatttaaagatgattattataattgtgatg 22448962  T
Q  146 tgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    |||||||||||||  | |||||||||||| |||||| ||||||||||||| ||||||||||||| || ||||||||    
T  22448963 tgacatgcccgtttag-ttttactctgat-gttgaattattattatttaaaggattttgggaaatggggtgttaca 22449036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 174
Target Start/End: Complemental strand, 19852590 - 19852473
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||||||||||||||| || || ||||||||||  ||| ||||||| |||||||| ||||   ||||||||||| |||||||||||  ||||||||||||    
T  19852590 aaatattccgctgcaaatt-aatgatgattttg--aaggatgttta-ttaaatagttttt---atattctattttagaaattttgaaaatgtagtgtgac 19852498  T
Q  150 atgcccgttggggttttactctgat 174  Q
    ||||||||| | | |||||||||||    
T  19852497 atgcccgtttgagatttactctgat 19852473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 158
Target Start/End: Original strand, 20838777 - 20838879
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||| |||||||||||  |||| ||||||||||  ||| ||||||| ||||||||| |||   |||||||||||||||||||||||  ||||||||||||    
T  20838777 aaattttccgctgcaaaattaatgatgattttg--aaggatgttta-ttaaatagaattt---atattctatttaagaaattttgaaaatgtagtgtgac 20838870  T
Q  150 atgcccgtt 158  Q
    |||||||||    
T  20838871 atgcccgtt 20838879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 20942536 - 20942599
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggtt-ttactctgat 174  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||||||    
T  20942536 tatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggttattactctgat 20942599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 221
Target Start/End: Original strand, 20824958 - 20825123
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||| |||||| ||||  |||| ||||||||||  ||| ||||||| ||||||||| |||   |||||||||||||||||||||||  ||||||||||||    
T  20824958 aaattttccgccgcaaaattaatgatgattttg--aaggatgttta-ttaaatagaattt---atattctatttaagaaattttgaaaatgtagtgtgac 20825051  T
Q  150 atgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    ||||||||| |||   |||||||||   ||     |||||| ||||| ||||||||||||||| ||||||||    
T  20825052 atgcccgtttgggaactactctgatgcatgtttatttattaattaattgattttgggaaacggggtgttaca 20825123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 174
Target Start/End: Complemental strand, 47483621 - 47483539
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||| ||||||||||||||||  ||||||||||||||||||||   ||||||||||||||||||| |||||  ||||||||    
T  47483621 atgtttaat-aaatagatttttatat--tctatttaagaaattttgatatagtagtgtgacatgcccgtttgggttgaactctgat 47483539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 16884220 - 16884283
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggtt-ttactctgat 174  Q
    ||||||||||||||||||||||||  || |||||||||||||||||| ||||| ||||||||||    
T  16884220 tatattctatttaagaaattttgaaaatatagtgtgacatgcccgtttgggttattactctgat 16884283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 221
Target Start/End: Complemental strand, 19960645 - 19960544
Alignment:
Q  119 tatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaa-tattattatttaatggattttgggaaacggtgtgt 217  Q
    ||||||| |||||||||  | |||||||  ||||||||||||||||| |||||||| ||||||| ||||||||||| || ||||||||||||||  ||||    
T  19960645 tatttaataaattttgaaaa-gtagtgtagcatgcccgttggggtttcactctgat-gttgaaaatattattattttattgattttgggaaacgaggtgt 19960548  T
Q  218 taca 221  Q
    ||||    
T  19960547 taca 19960544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 21541384 - 21541275
Alignment:
Q  112 tatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaat-attattatttaatggattttgggaaa 209  Q
    ||||||||||||||||||  |||||  ||||||||||||||||||||| |||||||||||| | ||||||| | |||||||||||||   ||||||| ||    
T  21541384 tatattctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtt-gggttttactct-aatgttgaattaattattatttaattacttttgggtaa 21541287  T
Q  210 cggtgtgttaca 221  Q
    ||| ||||||||    
T  21541286 cggggtgttaca 21541275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 174
Target Start/End: Complemental strand, 11944635 - 11944522
Alignment:
Q  55 ttccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcc 154  Q
    |||||||||||  |||| ||||||||||  ||| ||| ||| |||||||||||||   ||||||||||||||||| |||||  |||||||||||||||||    
T  11944635 ttccgctgcaaaattaatgatgattttg--aaggatgctta-ttaaatagatttt---atattctatttaagaaaatttgaaaatgtagtgtgacatgcc 11944542  T
Q  155 cgttggggttttactctgat 174  Q
    | || |||  ||||||||||    
T  11944541 catttgggaattactctgat 11944522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 43631430 - 43631527
Alignment:
Q  55 ttccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcc 154  Q
    |||||||||||  |||| ||||||||||  ||| ||| ||| |||||||||||||   ||||||||||||||||| |||||  |||||||||||||||||    
T  43631430 ttccgctgcaaaattaatgatgattttg--aaggatgctta-ttaaatagatttt---atattctatttaagaaaatttgaaaatgtagtgtgacatgcc 43631523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 11810455 - 11810515
Alignment:
Q  114 tattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgatt 175  Q
    ||||||||||||||||||||||  | ||||||||||||||||||| |||||| |||||||||    
T  11810455 tattctatttaagaaattttgaaaa-gtagtgtgacatgcccgttcgggtttaactctgatt 11810515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 223
Target Start/End: Complemental strand, 21663688 - 21663553
Alignment:
Q  84 gaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccg-ttggggttttactctgat-tgttgaa 181  Q
    |||| |||||||||||||||| ||||   | |||||||||||||||||||||  |||||||||||||||| || || ||| | ||||||||| |||| |     
T  21663688 gaaggatgtttaattaaatagttttt---acattctatttaagaaattttgaaaatgtagtgtgacatgcacgttttgggatatactctgatgtgttta- 21663593  T
Q  182 atattattatttaatggattttgggaaacggtgtgttacaaa 223  Q
       |||||||||||  ||||||||| ||||| ||||||||||    
T  21663592 --tttattatttaaatgattttgggtaacggggtgttacaaa 21663553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 42096637 - 42096718
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||  |||||||| ||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||    
T  42096637 gtttaattaaatag--ttttatat-ttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 42096718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 174
Target Start/End: Complemental strand, 11156450 - 11156390
Alignment:
Q  115 attctatttaagaaattttgatgatgtagtgtgacatgcccgttggggtt-ttactctgat 174  Q
    ||||||||||| |||||||||  ||||||||||||||||||||| ||||| ||||||||||    
T  11156450 attctatttaataaattttgaaaatgtagtgtgacatgcccgtttgggttattactctgat 11156390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 29240471 - 29240526
Alignment:
Q  119 tatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||||  ||||||||||||||||||||| |||  ||||||||||    
T  29240471 tatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgat 29240526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 174
Target Start/End: Complemental strand, 45306332 - 45306214
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||| ||||||||||| ||||| ||||| ||||  ||| | ||||| |||||||||||||   |||||||| |||| |||||||||  ||| ||||||||    
T  45306332 aaattttccgctgcaaatttaatgatgactttg--aaggacgttta-ttaaatagatttt---atattctacttaaaaaattttgaaaatgaagtgtgac 45306239  T
Q  150 atgcccgttggggttttactctgat 174  Q
    ||||||||| |||  ||||||||||    
T  45306238 atgcccgtttgggaattactctgat 45306214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 288
Target Start/End: Complemental strand, 28538625 - 28538559
Alignment:
Q  222 aagcctagactctgaaacatggattatagcttagagctaattggtttacatttcaaagattcttact 288  Q
    ||||||||||||   |||||||||  |||||||||| ||||||||| ||||||||||||||| ||||    
T  28538625 aagcctagactcctgaacatggatcctagcttagagttaattggttcacatttcaaagattcatact 28538559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 21729690 - 21729629
Alignment:
Q  113 atattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||| |||||    ||||||||||||||||||| ||| |||||||||||    
T  21729690 atattctatttaagaaaatttgaaatagtagtgtgacatgcccgtttgggatttactctgat 21729629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 282
Target Start/End: Complemental strand, 2900523 - 2900467
Alignment:
Q  226 ctagactctgaaacatggattatagcttagagctaattggtttacatttcaaagatt 282  Q
    ||||||| || |||||||||  ||||||||||||||||||||  |||||||||||||    
T  2900523 ctagactttgtaacatggatcctagcttagagctaattggttgtcatttcaaagatt 2900467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 222
Target Start/End: Original strand, 19667353 - 19667516
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||||||||||||||| || || ||||||||||  ||| ||||||| |||||||| ||||   |||||||||||||    ||||||  ||||||||||||    
T  19667353 aaatattccgctgcaaatt-aatgatgattttg--aaggatgttta-ttaaatagttttt---atattctatttaaatttttttga--atgtagtgtgac 19667443  T
Q  150 atgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    || |||||| ||| |||||||||||   ||    ||||||||||||| | ||||||| ||||| |||||||||    
T  19667444 atacccgtttgggatttactctgatgtatgtttaattattatttaattgcttttgggtaacggggtgttacaa 19667516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 24076841 - 24076771
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggg 161  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||    |||||||||||||| |||||||    
T  24076841 atgtttaat-aaatagattttt-tatattctattttagaaattttgaaatagtagtgtgacatgctcgttggg 24076771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 27908405 - 27908354
Alignment:
Q  237 aacatggattatagcttagagctaattggtttacatttcaaagattcttact 288  Q
    |||||||||  |||||||||||||||||||| |||||||||| |||| ||||    
T  27908405 aacatggatcctagcttagagctaattggttcacatttcaaatattcatact 27908354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 11141689 - 11141734
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  11141689 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 11141734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Complemental strand, 21697629 - 21697584
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  21697629 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 21697584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 24109729 - 24109789
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||| ||| ||||||  ||||||||||||||||||||| || ||||||||||||    
T  24109729 tatattctatttaggaa-ttttgaaaatgtagtgtgacatgcccgtt-ggattttactctgat 24109789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 31928095 - 31928140
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  31928095 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 31928140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 20707363 - 20707428
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatata 115  Q
    |||||||||||||||||||||| ||  |||||  |||  | |||| ||||||||||||||||||||    
T  20707363 aaatattccgctgcaagtttaatgagaattttatgaatgacgtttgattaaatagatttttatata 20707428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 18710207 - 18710143
Alignment:
Q  112 tatattctatttaagaaattttg-atgatgtagtgtgacatgcccgttggggtt-ttactctgat 174  Q
    |||||||||||||||||| |||| |  ||| ||||||||||||||||| ||||| ||||||||||    
T  18710207 tatattctatttaagaaaatttgaaaaatgaagtgtgacatgcccgtttgggttattactctgat 18710143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 21738039 - 21738082
Alignment:
Q  114 tattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||  | |||||||||||||||||||    
T  21738039 tattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 21738082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 21746442 - 21746485
Alignment:
Q  114 tattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||  | |||||||||||||||||||    
T  21746442 tattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 21746485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 23630447 - 23630404
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccg 156  Q
    ||||||||||||||||||||||||  | |||||||||||||||||    
T  23630447 tatattctatttaagaaattttga-aaagtagtgtgacatgcccg 23630404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 77; Significance: 9e-36; HSPs: 4)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 16863 - 17028
Alignment:
Q  53 tattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatg 152  Q
    |||| |||||||||||||| ||||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||||| |||||   ||||||||||||||    
T  16863 tatttcgctgcaagtttaatgatgaattttg-aaggatgtttaataaaatagatttttatatatactatttaagaaa-tttgaaattgtagtgtgacatg 16960  T
Q  153 cccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    |||||| || |||||||| || |||||||  ||||||||||||| ||||||||||||||| ||||||||    
T  16961 cccgtttggattttactcaga-tgttgaacaattattatttaattgattttgggaaacggggtgttaca 17028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 53 - 170
Target Start/End: Original strand, 1043 - 1158
Alignment:
Q  53 tattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatg 152  Q
    |||| |||||||||||||| ||||| ||| | ||| ||||||||||||||||||||||||||||||||||||||||| |||||   ||||||||||||||    
T  1043 tatttcgctgcaagtttaatgatgaattttg-aaggatgtttaattaaatagatttttatatattctatttaagaaa-tttgaaattgtagtgtgacatg 1140  T
Q  153 cccgttggggttttactc 170  Q
    |||||| |||||||||||    
T  1141 cccgtttgggttttactc 1158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 174
Target Start/End: Complemental strand, 8047 - 7966
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||| ||||   |||||||||||||||| ||||||  ||||||||||||||||||||| ||| | |||||||||    
T  8047 atgtttaattaaatagttttt---atattctatttaagaatttttgaa-atgtagtgtgacatgcccgtttgggatatactctgat 7966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 174
Target Start/End: Complemental strand, 15949 - 15868
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||| ||||   |||||||||||||||| ||||||  ||||||||||||||||||||| ||| | |||||||||    
T  15949 atgtttaattaaatagttttt---atattctatttaagaatttttgaa-atgtagtgtgacatgcccgtttgggatatactctgat 15868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 222
Target Start/End: Original strand, 22064201 - 22064367
Alignment:
Q  51 aatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaa-ttttgatgatgtagtgtgac 149  Q
    ||||||||||||||  ||||| ||| ||||||  ||| ||||| ||||||||||||||||||||  ||||||||||||| ||||||  ||||||||||||    
T  22064201 aatattccgctgcagatttaatgataattttg--aaggatgtt-aattaaatagatttttatat--tctatttaagaaaattttgaaaatgtagtgtgac 22064295  T
Q  150 atgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    ||||||||| |||||||||| ||| |||| || |||||||||||||| ||||||||||||||| |||||||||    
T  22064296 atgcccgtttgggttttactatga-tgttaaattattattatttaattgattttgggaaacggggtgttacaa 22064367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 224
Target Start/End: Complemental strand, 21668438 - 21668256
Alignment:
Q  36 ttatttaagttgaaaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttga 135  Q
    |||||||||||||||||||||||||||||| |||||  ||||||||  |||| |||||| |||||||| ||||   ||||||||||||||||||||||||    
T  21668438 ttatttaagttgaaaaatattccgctgcaaatttaataatgatttt--gaaggatgttt-attaaataaattt---tatattctatttaagaaattttga 21668345  T
Q  136 tgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatatta-ttatttaatggattttgggaaacggtgtgttacaaag 224  Q
        |||||||||||||||| || ||| |||||||||| ||||||| ||||| ||||| |||   ||||||| ||||| |||||||||||    
T  21668344 attagtagtgtgacatgcccatttgggatttactctga-tgttgaattattatttattaaattacttttgggtaacggggtgttacaaag 21668256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 222
Target Start/End: Original strand, 22176551 - 22176674
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaata-ttattattta 194  Q
    ||||||||||||||   |||||||||||||||||||||||  ||||||||||||||||||||| ||| |||||||| | ||||||| || |||||||| |    
T  22176551 attaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggatttactct-aatgttgaattatttattattaa 22176646  T
Q  195 atggattttgggaaacggtgtgttacaa 222  Q
    || ||||||||| ||||| |||||||||    
T  22176647 attgattttgggtaacggggtgttacaa 22176674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 119 - 223
Target Start/End: Original strand, 29644268 - 29644370
Alignment:
Q  119 tatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgtt 218  Q
    ||||||| |||||||||  | |||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||    
T  29644268 tatttaataaattttgaaaa-gtagtgtagcatgcccgttagggttttactctgat-gttgaaatattattatttaattgattttgggaaacggggtgtt 29644365  T
Q  219 acaaa 223  Q
    |||||    
T  29644366 acaaa 29644370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 221
Target Start/End: Original strand, 6609371 - 6609490
Alignment:
Q  97 ttaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaat 196  Q
    |||||||||||||   |||||||||||||||||||||||  ||||||||||||||||||||| |||  ||||||||||   |||   ||||||| |||||    
T  6609371 ttaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatga---attattaattaat 6609464  T
Q  197 gga-ttttgggaaacggtgtgttaca 221  Q
    ||| ||||||||||||| ||||||||    
T  6609465 ggatttttgggaaacggggtgttaca 6609490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 22026676 - 22026756
Alignment:
Q  141 tagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    |||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||| ||||||||||||| | |||||||||    
T  22026676 tagtgtgacatgtccgtttgggttttactctgat-gttgaattattattatttaattgattttgggaaacagggtgttacaa 22026756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 174
Target Start/End: Complemental strand, 21281553 - 21281433
Alignment:
Q  49 aaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtga 148  Q
    |||||| ||||||||||||| || ||||||||||  ||| ||||||||||||||||||||||  ||||||||||||||||| ||| |   || |||||||    
T  21281553 aaaataatccgctgcaagttaaatgatgattttg--aaggatgtttaattaaatagattttt--atattctatttaagaaa-tttaaaattgaagtgtga 21281459  T
Q  149 catgcccgttggggttttactctgat 174  Q
    |||||||||| |||  ||||||||||    
T  21281458 catgcccgtttgggaattactctgat 21281433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 5239514 - 5239453
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  5239514 tatattctatttaagaaattttgataatgtattgtgacatgcccgtt-gggttttactctgat 5239453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 7302271 - 7302391
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaa 195  Q
    ||||||||||||||   |||||||||||||||||||||||  ||||||||||||||||||||| |||  ||||||||||   |||   ||||||| ||||    
T  7302271 attaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatga---attattaattaa 7302364  T
Q  196 tgga-ttttgggaaacggtgtgttaca 221  Q
    | || ||||||||||||| ||||||||    
T  7302365 ttgatttttgggaaacggggtgttaca 7302391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 27889357 - 27889248
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaat-attattatttaatggattttgggaaac 210  Q
    |||||||||||||||||||||||||   ||||||||||||||||||| |||||  ||||||| ||||||| | |||||||||||||   ||||||| |||    
T  27889357 tatattctatttaagaaattttgatatagtagtgtgacatgcccgtttgggttgaactctga-tgttgaattaattattatttaattacttttgggtaac 27889259  T
Q  211 ggtgtgttaca 221  Q
    || ||||||||    
T  27889258 ggggtgttaca 27889248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 27948015 - 27947906
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaat-attattatttaatggattttgggaaac 210  Q
    |||||||||||||||||||||||||   ||||||||||||||||||| |||||  ||||||| ||||||| | |||||||||||||   ||||||| |||    
T  27948015 tatattctatttaagaaattttgatatagtagtgtgacatgcccgtttgggttgaactctga-tgttgaattaattattatttaattacttttgggtaac 27947917  T
Q  211 ggtgtgttaca 221  Q
    || ||||||||    
T  27947916 ggggtgttaca 27947906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 28852951 - 28852831
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaa 195  Q
    ||||||||||||||   |||||||||||||||||||||||  ||||||||||||||||||||| |||  ||||||||||   ||   | |||||| ||||    
T  28852951 attaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatg---ttttattaattaa 28852858  T
Q  196 tgga-ttttgggaaacggtgtgttaca 221  Q
    | || ||||||||||||||||||||||    
T  28852857 ttgatttttgggaaacggtgtgttaca 28852831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 45136055 - 45136175
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaa 195  Q
    ||||||||||||||   |||||||||||||||||||||||  ||||||||||||||||||||| |||  ||||||||||   |||   ||||||| ||||    
T  45136055 attaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatga---attattaattaa 45136148  T
Q  196 tgga-ttttgggaaacggtgtgttaca 221  Q
    | || ||||||||||||| ||||||||    
T  45136149 ttgatttttgggaaacggggtgttaca 45136175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 174
Target Start/End: Original strand, 21300830 - 21300912
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggtt-ttactctgat 174  Q
    |||||||||||||||| |||    |||||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||||||    
T  21300830 atgtttaattaaatagtttt----atattctatttaagaaattttgaaaatgtagtgtgacatgcccgttcgggttattactctgat 21300912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 174
Target Start/End: Complemental strand, 34949730 - 34949610
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||| |||||||||||  |||| ||||||||||  ||| ||||||| |||||||||||||| | ||||||||||| |||| |||||  ||||||||||||    
T  34949730 aaattttccgctgcaaaattaatgatgattttg--aaggatgttta-ttaaatagattttttt-tattctatttatgaaaatttgaaaatgtagtgtgac 34949635  T
Q  150 atgcccgttggggttttactctgat 174  Q
    ||||||||| |||  ||||||||||    
T  34949634 atgcccgtttgggaattactctgat 34949610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 174
Target Start/End: Original strand, 21322909 - 21322984
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||   |||||||||||||||||||||||  ||||||||||||||||||||| |||  ||||||||||    
T  21322909 attaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgat 21322984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 158
Target Start/End: Original strand, 21327458 - 21327556
Alignment:
Q  54 attccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgc 153  Q
    ||||||||||||  |||| |||||| |||  ||| ||||||| |||||||||||||   |||||||||||||||||||||||  ||||||||||||||||    
T  21327458 attccgctgcaaaattaatgatgatcttg--aaggatgttta-ttaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgc 21327551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 23824500 - 23824391
Alignment:
Q  112 tatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaat-attattatttaatggattttgggaaa 209  Q
    ||||||||||||||||||  |||||  ||||||||||||||||||||| |||||||||||||| ||||||| | |||||||||||||   ||||||| ||    
T  23824500 tatattctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtt-gggttttactctga-tgttgaattaattattatttaattacttttgggtaa 23824403  T
Q  210 cggtgtgttaca 221  Q
    ||| ||||||||    
T  23824402 cggggtgttaca 23824391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 154
Target Start/End: Complemental strand, 44430942 - 44430844
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    ||||||||||||||||  |||| |||||| |||  ||| ||||||| |||||||||||||   |||||||||||||||||||||||  ||||||||||||    
T  44430942 aaatattccgctgcaaaattaatgatgatcttg--aaggatgttta-ttaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgac 44430849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 44494658 - 44494776
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||| |||||||||||  | || ||||||||||  ||| ||||||| |||||||||||||   ||||||||||||||||| |||||  ||||||||||||    
T  44494658 aaattttccgctgcaaaatcaatgatgattttg--aaggatgttta-ttaaatagatttt---atattctatttaagaaaatttgaaaatgtagtgtgac 44494751  T
Q  150 atgcccgttggggttttactctgat 174  Q
    ||||||||| |||  ||||||||||    
T  44494752 atgcccgtttgggaattactctgat 44494776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 20984527 - 20984590
Alignment:
Q  113 atattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggtt-ttactctgatt 175  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||| ||||| |||||||||||    
T  20984527 atattctatttaagaaattttaaaaatgtagtgtgacatgcccgtttgggttattactctgatt 20984590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 31419416 - 31419476
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||| |||||||||||||||    
T  31419416 tatattctattta-gaaattttgaaaatgtagtgtgacatgcccgtt-gggttttactctgat 31419476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 30767684 - 30767765
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||  |||||||| ||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||    
T  30767684 gtttaattaaatag--ttttatat-ttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 30767765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 22248539 - 22248480
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||   |||||||||||||||||| ||||  |||||||||||||||||||||    
T  22248539 attaaatagatttt---atattctatttaagaaatcttgaaaatgtagtgtgacatgcccgtt 22248480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 36601148 - 36601089
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||   |||||||||||||||||| ||||  |||||||||||||||||||||    
T  36601148 attaaatagatttt---atattctatttaagaaatcttgaaaatgtagtgtgacatgcccgtt 36601089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 1263697 - 1263635
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||| |||||||||||    ||||||||||| ||||||||||||| |||||||||    
T  1263697 tatattctatttgagaaattttgaattagtagtgtgacacgcccgttggggttatactctgat 1263635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 31412977 - 31413037
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||| |||||| ||||||||||  ||||||||||||||||||||| |||||||||||||||    
T  31412977 tatattatattta-gaaattttgaaaatgtagtgtgacatgcccgtt-gggttttactctgat 31413037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 19988871 - 19988924
Alignment:
Q  112 tatattctatttaagaaattt-tgatgatgtagtgtgacatgcccgttggggtt 164  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||||| |||||    
T  19988871 tatattctatttaagaaatttgtgaaaatgtagtgtgacatgcccgtttgggtt 19988924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 20840571 - 20840657
Alignment:
Q  84 gaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||| |||||||||||||||| |||    |||| |||||||||||| |||||    ||||||||||||||||||| ||| |||||||||||    
T  20840571 gaaggatgtttaattaaatagtttt----atatgctatttaagaaaatttgaattagtagtgtgacatgcccgtttgggatttactctgat 20840657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 23373947 - 23373882
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatata 115  Q
    |||||||||||||||||||||| ||  |||||  |||  |||||| ||||||||||||||||||||    
T  23373947 aaatattccgctgcaagtttaatgacaattttatgaatgatgtttgattaaatagatttttatata 23373882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 175
Target Start/End: Complemental strand, 39362941 - 39362881
Alignment:
Q  114 tattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgatt 175  Q
    ||||||||||||||||||||||  | ||||||||||||||||||| | |||| |||||||||    
T  39362941 tattctatttaagaaattttgaaaa-gtagtgtgacatgcccgttcgtgtttaactctgatt 39362881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 174
Target Start/End: Complemental strand, 11773756 - 11773681
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||   |||||||||||||||||| ||||  |||||||||| |||| ||||| |||  ||||||||||    
T  11773756 attaaatagatttt---atattctatttaagaaatcttgaaaatgtagtgtgtcatgtccgtttgggaattactctgat 11773681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 18609653 - 18609588
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    |||||||||||||||| |||    |||||||||||| ||||||||||  ||| |||||||||||||||||    
T  18609653 atgtttaattaaatagtttt----atattctatttacgaaattttgaaaatgaagtgtgacatgcccgtt 18609588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 19442504 - 19442444
Alignment:
Q  228 agactctgaaacatggattatagcttagagctaattggtttacatttcaaagattcttact 288  Q
    |||||||| |||||||||| || |||||||||| ||| || ||||||||||||||| ||||    
T  19442504 agactctggaacatggattctaacttagagctatttgtttcacatttcaaagattcatact 19442444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 19578655 - 19578595
Alignment:
Q  228 agactctgaaacatggattatagcttagagctaattggtttacatttcaaagattcttact 288  Q
    |||||||| |||||||||| || |||||||||| ||| || ||||||||||||||| ||||    
T  19578655 agactctggaacatggattctaacttagagctatttgtttcacatttcaaagattcatact 19578595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 22011804 - 22011865
Alignment:
Q  112 tatattctatttaagaaa-ttttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||||| ||||||  | ||||||||||||||||||| ||| |||||||||||    
T  22011804 tatattctatttaagaaaattttga--aagtagtgtgacatgcccgtttgggatttactctgat 22011865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 22055247 - 22055169
Alignment:
Q  144 tgtgacatgcccgttggggttttactctgattgttga---aatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
    ||||||||||||||||||  |||||||||| | ||||   | |||||||||||||| ||||||||||||||| |||||||||    
T  22055247 tgtgacatgcccgttggg--tttactctga-tattgaattattattattatttaattgattttgggaaacggggtgttacaa 22055169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 25110359 - 25110307
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggtt 164  Q
    ||||||||||||||||||||||||    ||||||||||||||||||| |||||    
T  25110359 tatattctatttaagaaattttgaattagtagtgtgacatgcccgtttgggtt 25110307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 158
Target Start/End: Original strand, 8415546 - 8415648
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    ||||||||||||||||  |||| |||||| |||  ||  ||||||| |||||||||||||   |||||||||||||||| |||| |  ||||||||||||    
T  8415546 aaatattccgctgcaaaattaatgatgatcttg--aatgatgttta-ttaaatagatttt---atattctatttaagaattttttaaaatgtagtgtgac 8415639  T
Q  150 atgcccgtt 158  Q
    || ||||||    
T  8415640 atacccgtt 8415648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 22989086 - 22989027
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    |||||||||||||||||||  |||||||||||||||||||  | |||| ||||||||||||||    
T  22989086 attaaatagatttttatat--tctatttaagaaattttga-aaagtagcgtgacatgcccgtt 22989027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Complemental strand, 19852986 - 19852941
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  19852986 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 19852941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Complemental strand, 19859022 - 19858977
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  19859022 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 19858977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Complemental strand, 20005846 - 20005801
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  20005846 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 20005801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 25625448 - 25625493
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  25625448 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 25625493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 36446409 - 36446475
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||| |||||||| |  ||| |||||||||||||||  ||||| |||||||||||||||    
T  36446409 atgtttaattaaata-atttttattt--tctttttaagaaattttgaaaatgtaatgtgacatgcccgtt 36446475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 29327537 - 29327480
Alignment:
Q  98 taaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    |||||||||||||||||  |||||||||||||||||||  |||||||||  ||||||||||    
T  29327537 taaatagatttttatat--tctatttaagaaattttga-aatgtagtgtagcatgcccgtt 29327480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 21968501 - 21968562
Alignment:
Q  112 tatattctatttaagaaa-ttttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||||| ||||||  | ||||||||||||||||||| ||| |||||| ||||    
T  21968501 tatattctatttaagaaaattttga--aagtagtgtgacatgcccgtttgggatttactttgat 21968562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 21986260 - 21986321
Alignment:
Q  112 tatattctatttaagaaa-ttttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||||| ||||||  | ||||||||||||||||||| | | |||||||||||    
T  21986260 tatattctatttaagaaaattttga--aagtagtgtgacatgcccgtttgagatttactctgat 21986321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 221
Target Start/End: Complemental strand, 13454 - 13281
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||||||||||||||||||||| | |||||||| |||  | ||||||||||||||||||||||||||||||||||||||||||  |||| | | |||| |    
T  13454 aaatattccgctgcaagtttaatggtgattttgtgaatgacgtttaattaaatagatttttatatattctatttaagaaatttcaatgaggaaatgtggc 13355  T
Q  150 atgcccgttggggttttactctgattgttga---aatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    |||||||||| || |||||||||||| ||||   | || ||||||||| |  |||||||||||||| ||||||||    
T  13354 atgcccgttgtgg-tttactctgattattgatttattactattatttagttcattttgggaaacggggtgttaca 13281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 227
Target Start/End: Original strand, 11177 - 11351
Alignment:
Q  51 aatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattt-tgatga-tgtagtgtga 148  Q
    ||||||||||||||  ||||| ||||| || |  ||| ||||||||||||||||||||||||||  |||||||||||  ||| | |||| |||  |||||    
T  11177 aatattccgctgcagatttaatgatgaattcg--aaggatgtttaattaaatagatttttatat--tctatttaagatgtttattatgaatgtgatgtga 11272  T
Q  149 catgcccgttggggttttactctgattgttgaaata-ttattatttaatggattttgggaaacggtgtgttacaaagcct 227  Q
    |||||||||| |||||||| ||||| | ||||| || |||||||||||| || ||||| |||||| ||||||||| ||||    
T  11273 catgcccgtttgggttttattctga-tattgaattatttattatttaattgaatttggaaaacggggtgttacaatgcct 11351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 222
Target Start/End: Original strand, 16105 - 16243
Alignment:
Q  84 gaagaatgtttaattaaatagatttttatatattctatttaagaaattt-tgat-gatgtagtgtgacatgcccgttggggttttactctgattgttgaa 181  Q
    |||| |||||||||||||||||||||  ||||||||||||||||  ||| | ||  |||   ||||||||||| ||| |||||||||| ||| | |||||    
T  16105 gaaggatgtttaattaaatagatttt--tatattctatttaagatgtttattataaatgcgatgtgacatgccagtttgggttttactttga-tattgaa 16201  T
Q  182 ata-ttattatttaatggattttgggaaacggtgtgttacaa 222  Q
     || |||||||||||| || ||||||||| || |||||||||    
T  16202 ttatttattatttaattgaatttgggaaaaggggtgttacaa 16243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 221
Target Start/End: Complemental strand, 70668 - 70486
Alignment:
Q  36 ttatttaagttgaaaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttga 135  Q
    |||||||||||||||||||||||||||||| |||||  || |||||  |||| |||||| |||||||||||||   ||||||||||||||||||||||||    
T  70668 ttatttaagttgaaaaatattccgctgcaaatttaataataatttt--gaaggatgttt-attaaatagattt---tatattctatttaagaaattttga 70575  T
Q  136 tgatgtagtgtgacatgcccgttggggttttac---tctgattgttgaaatatta-ttatttaatggattttgggaaacggtgtgttaca 221  Q
        ||||||||||||||||||| ||| |||||   ||||| ||||||| ||||| ||||| ||| ||||||||| ||||| ||||||||    
T  70574 attagtagtgtgacatgcccgtttgggatttactgatctga-tgttgaattattatttattaaattgattttgggtaacggggtgttaca 70486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 16190 - 16228
Alignment:
Q  183 tattattatttaatggattttgggaaacggtgtgttaca 221  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  16190 tattattatttaattgattttgggaaacggggtgttaca 16228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 50 - 174
Target Start/End: Complemental strand, 16507 - 16388
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||||||||||||||| ||||| ||||||||||  ||| ||||||| ||||||||||||||||||  |||||||||||||||||||  ||||||||||||    
T  16507 aaatattccgctgcaaatttaatgatgattttg--aaggatgttta-ttaaatagatttttatat--tctatttaagaaattttgaaaatgtagtgtgac 16413  T
Q  150 atgcccgttggggttttactctgat 174  Q
    |||| |||| |||  ||||||||||    
T  16412 atgcgcgtttgggaattactctgat 16388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 84 - 221
Target Start/End: Original strand, 6572 - 6709
Alignment:
Q  84 gaagaatgtttaattaaatagatttttatatattctatttaagaa-attttgatga-tgtagtgtgacatgcccgtt-ggggttttactctgattgttga 180  Q
    |||| ||||||||||||||||||||||||||  |||||||||||  ||| | || | |||  ||||||||||||||| ||||||||||||||||  ||||    
T  6572 gaaggatgtttaattaaatagatttttatat--tctatttaagatgattattataaatgtgttgtgacatgcccgtttggggttttactctgata-ttga 6668  T
Q  181 aatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    | |||||||||||||| ||||||||||||||| ||||||||    
T  6669 attattattatttaattgattttgggaaacggggtgttaca 6709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 50 - 174
Target Start/End: Complemental strand, 55480 - 55362
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||| |||||||||||  |||| ||||||||||  ||| ||||||| |||||||||||||   |||||||||||||||||||||||  ||||||||||||    
T  55480 aaattttccgctgcaaaattaatgatgattttg--aaggatgttta-ttaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgac 55387  T
Q  150 atgcccgttggggttttactctgat 174  Q
    ||||||||| |||  ||||||||||    
T  55386 atgcccgtttgggaattactctgat 55362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 84 - 221
Target Start/End: Complemental strand, 13544 - 13407
Alignment:
Q  84 gaagaatgtttaattaaatagatttttatatattctatttaa---gaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttga 180  Q
    |||| ||||||| ||||||||||||||||||  |||||||||   ||  | ||||  ||||  |||||||| |||||| ||||||||||||||| |||||    
T  13544 gaaggatgtttagttaaatagatttttatat--tctatttaaattgatttattgaaaatgtgatgtgacatacccgtttgggttttactctgat-gttga 13448  T
Q  181 aatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    | |||||||||||||| ||||||||||||||| ||||||||    
T  13447 attattattatttaattgattttgggaaacggggtgttaca 13407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 125083 - 125203
Alignment:
Q  50 aaatattccgctgcaagttt-aacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtga 148  Q
    |||||||||||||||| ||| || |||||||| |  ||| ||||||| |||||||||||||||||  ||||||||||||||||||||  |||||||||||    
T  125083 aaatattccgctgcaaattttaatgatgatttcg--aaggatgttta-ttaaatagatttttata--ttctatttaagaaattttgaaaatgtagtgtga 125177  T
Q  149 catgcccgttggggttttactctgat 174  Q
    |||||||||| |||  ||||||||||    
T  125178 catgcccgtttgggaattactctgat 125203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 159
Target Start/End: Complemental strand, 117531 - 117487
Alignment:
Q  114 tattctatttaagaaattttgatgatgtagtgtgacatgcccgttg 159  Q
    ||||||||||||||||||||||  || |||||||||||||||||||    
T  117531 tattctatttaagaaattttgaaaat-tagtgtgacatgcccgttg 117487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 12092 - 11972
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaa 195  Q
    ||||||||||||||   |||||||||||||||||||||||  ||||||||||||||||||||| |||  ||||||||||   |||   ||||||| ||||    
T  12092 attaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatga---attattaattaa 11999  T
Q  196 tgga-ttttgggaaacggtgtgttaca 221  Q
    |||| ||||||||||||| ||||||||    
T  11998 tggatttttgggaaacggggtgttaca 11972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 51; Significance: 3e-20; HSPs: 5)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 221
Target Start/End: Complemental strand, 251443 - 251279
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||||||||||||||| || || ||||||||||  ||| ||||||| |||||||| ||||   |||||||||||||||||||||||  ||||||||||||    
T  251443 aaatattccgctgcaaatt-aatgatgattttg--aaggatgttta-ttaaatagttttt---atattctatttaagaaattttgaaaatgtagtgtgac 251351  T
Q  150 atgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    ||||||||| ||| |||||| ||||   ||    ||||||||||||| | ||||||| ||||| ||||||||    
T  251350 atgcccgtttgggatttactttgatgtatgtttaattattatttaattgcttttgggtaacggggtgttaca 251279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 198119 - 198182
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggtt-ttactctgat 174  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||||||    
T  198119 tatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggttattactctgat 198182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 174
Target Start/End: Complemental strand, 258054 - 257945
Alignment:
Q  59 gctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    |||||||  |||| ||||||||||  ||| ||||||| |||||||||||||   |||||||||||||||||||||||  ||||||||||| |||||||||    
T  258054 gctgcaaaattaatgatgattttg--aaggatgttta-ttaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgatatgcccgtt 257961  T
Q  159 ggggttttactctgat 174  Q
     |||  ||||||||||    
T  257960 tgggaattactctgat 257945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 175295 - 175376
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||  |||||||| ||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||    
T  175295 gtttaattaaatag--ttttatat-ttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 175376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 146511 - 146450
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||| |||||||||||||||||||  | ||||||||||||||||||| ||| |||||||||||    
T  146511 tataatctatttaagaaattttgaaaa-gtagtgtgacatgcccgtttgggatttactctgat 146450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 221
Target Start/End: Original strand, 3731 - 3891
Alignment:
Q  55 ttccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcc 154  Q
    |||||||||||  |||| ||||||||||  ||| ||| ||| |||||||||||||   ||||||||||||||||| |||||  |||||||||||||||||    
T  3731 ttccgctgcaaaattaatgatgattttg--aaggatgctta-ttaaatagatttt---atattctatttaagaaaatttgaaaatgtagtgtgacatgcc 3824  T
Q  155 cgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    |||| |||  ||||||||||   ||    ||||||| ||||| ||||||||||||||| ||||||||    
T  3825 cgtttgggaattactctgatgcatgtttaattattaattaattgattttgggaaacggggtgttaca 3891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 84 - 221
Target Start/End: Complemental strand, 25782 - 25646
Alignment:
Q  84 gaagaatgtttaattaaatagatttttatatattctatttaagaa-attttgatga-tgtagtgtgacatgcccgttggggttttactctgattgttgaa 181  Q
    |||| ||||||||||||||||||||||||||  |||||||||||  ||| | || | | |  ||||||||||||||| |||||||||||||||  |||||    
T  25782 gaaggatgtttaattaaatagatttttatat--tctatttaagatgattattataaatatgatgtgacatgcccgtttgggttttactctgata-ttgaa 25686  T
Q  182 atattattatttaatggattttgggaaacggtgtgttaca 221  Q
     |||||||||||||| ||| ||||||||||| ||||||||    
T  25685 ttattattatttaattgatattgggaaacggggtgttaca 25646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 222
Target Start/End: Complemental strand, 41457 - 41328
Alignment:
Q  92 tttaattaaatagatttttatatattctatttaagaa-attttgatga-tgtagtgtgacatgcccgttggggttttactctgattgttgaaatattatt 189  Q
    |||||||||||||||||||||||  |||||||||||  ||| | || | |||  ||||||||||||||| |||||||||||||| | ||||| |||||||    
T  41457 tttaattaaatagatttttatat--tctatttaagatgattattataaatgtgatgtgacatgcccgtttgggttttactctga-tattgaattattatt 41361  T
Q  190 atttaatggattttgggaaacggtgtgttacaa 222  Q
    ||||||| ||||||||||||  | |||||||||    
T  41360 atttaattgattttgggaaatagggtgttacaa 41328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 33926 - 33819
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatgga-ttttgggaaac 210  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| |||  ||||||||||   |||   ||||||| |||||||| |||||||||||    
T  33926 tatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatga---attattaattaatggatttttgggaaac 33830  T
Q  211 ggtgtgttaca 221  Q
    || ||||||||    
T  33829 ggggtgttaca 33819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 174
Target Start/End: Complemental strand, 23547 - 23437
Alignment:
Q  58 cgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgt 157  Q
    |||||||||||||| ||||||||||  ||| ||| ||| |||||||||||||   ||||||||||||||||| |||||  ||| ||||||||||||| ||    
T  23547 cgctgcaagtttaatgatgattttg--aaggatgatta-ttaaatagatttt---atattctatttaagaaaatttgaaaatgaagtgtgacatgcctgt 23454  T
Q  158 tggggttttactctgat 174  Q
    | ||| |||||||||||    
T  23453 ttgggatttactctgat 23437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 174
Target Start/End: Complemental strand, 16008 - 15933
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||   ||||||||||||||||| |||||  ||| ||||||||||||||||| ||| |||||||||||    
T  16008 attaaatagatttt---atattctatttaagaaaatttgaaaatgaagtgtgacatgcccgtttgggatttactctgat 15933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 32161 - 32041
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaa 195  Q
    ||||||||||||||   |||||||||||||||||||||||  ||||||||||||||||||||| |||  ||||||||||   |||   ||||||| ||||    
T  32161 attaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatga---attattaattaa 32068  T
Q  196 tgga-ttttgggaaacggtgtgttaca 221  Q
    | || ||||||||||||| ||||||||    
T  32067 ttgatttttgggaaacggggtgttaca 32041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 221
Target Start/End: Complemental strand, 33698 - 33533
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||| |||||||||||  |||| ||||||||||  ||| || |||| |||||||||||||   |||||||||||||||||||||||  ||||||||||||    
T  33698 aaattttccgctgcaaaattaatgatgattttg--aaggattttta-ttaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgac 33605  T
Q  150 atgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    ||| ||||| |||  ||||||||||   ||     |||||| ||||| ||||||||||||||| ||||||||    
T  33604 atgtccgtttgggaattactctgatgcatgtttatttattaattaattgattttgggaaacggagtgttaca 33533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 222
Target Start/End: Complemental strand, 26830 - 26729
Alignment:
Q  121 tttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttac 220  Q
    |||||||||||||||  ||||||||||||||||||||| |||  ||||||||||   ||     |||||| ||||| ||||||||||||||| |||||||    
T  26830 tttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgtttatttattaattaattgattttgggaaacggggtgttac 26731  T
Q  221 aa 222  Q
    ||    
T  26730 aa 26729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 18844 - 18951
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaata-ttattatttaatggattttgggaaac 210  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||| | ||||||| |    |||| || |||||||||||| |||||| || |||    
T  18844 tatattctatttaagaaattttgaaaatgtagtgtgacatgcccgttgggttattactctaa----tgaattatttattatttaattgatttttgggaac 18939  T
Q  211 ggtgtgttacaa 222  Q
    || |||||||||    
T  18940 ggggtgttacaa 18951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 24471 - 24577
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaata-ttattatttaatggattttgggaaac 210  Q
    |||| |||||||||||||||||||  |||||||||||||||||||||||| | |||||||||    |||| || |||||||||||| ||||||||| |||    
T  24471 tatactctatttaagaaattttgaaaatgtagtgtgacatgcccgttgggttgttactctga----tgaattatttattatttaattgattttggg-aac 24565  T
Q  211 ggtgtgttacaa 222  Q
    || |||||||||    
T  24566 ggggtgttacaa 24577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 82651 - 82771
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaa 195  Q
    ||||||||||||||   |||||||||||||||||||||||  ||||||||||||||||||||| |||  ||||||||||   |||   ||||||| ||||    
T  82651 attaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatga---attattaattaa 82744  T
Q  196 tgga-ttttgggaaacggtgtgttaca 221  Q
    | || ||||||||||||| ||||||||    
T  82745 ttgatttttgggaaacggggtgttaca 82771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 88 - 222
Target Start/End: Complemental strand, 6120 - 5988
Alignment:
Q  88 aatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgt-tgaaatatt 186  Q
    ||||||||||||||||| ||||   ||||||||||||||||| ||| |  | | ||||||||||||||||| ||| |||||||||||||| ||    |||    
T  6120 aatgtttaattaaatagttttt---atattctatttaagaaaatttaaaaaagaagtgtgacatgcccgttagggatttactctgattgtatgtttcatt 6024  T
Q  187 attatttaatggattttgggaaacggtgtgttacaa 222  Q
    |||||||||| | ||||||| ||||| |||||||||    
T  6023 attatttaattgtttttgggtaacggggtgttacaa 5988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 28045 - 28120
Alignment:
Q  98 taaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||| |||||||||||||||||||||||||   ||||||||||||||||||| |||||  ||||||||    
T  28045 taaatagattttt-tatattctatttaagaaattttgatatagtagtgtgacatgcccgttcgggttgaactctgat 28120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 89 - 174
Target Start/End: Original strand, 21198 - 21281
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||| |||||||||||| |||||||| ||||||||||||||||   ||||||||||||||||||| |||||  ||||||||    
T  21198 atgtttaat-aaatagattttt-tatattctttttaagaaattttgatatagtagtgtgacatgcccgttcgggttgaactctgat 21281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 222
Target Start/End: Complemental strand, 39218 - 39078
Alignment:
Q  84 gaagaatgtttaattaaatagatttttat--atattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttga- 180  Q
    |||| |||||||||||||||| ||||| |  |||||||||||||||||||||||    ||||||||||||||||||| ||| |||||||| | || |||     
T  39218 gaaggatgtttaattaaatagttttttttttatattctatttaagaaattttgaattagtagtgtgacatgcccgtttgggatttactct-aatgatgat 39120  T
Q  181 -aatattattatttaatggattttgggaaacggtgtgttacaa 222  Q
     ||| |||||||| ||| ||||||||| ||||| |||||||||    
T  39119 taat-ttattattaaattgattttgggtaacggggtgttacaa 39078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 223
Target Start/End: Complemental strand, 1432 - 1265
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    ||||||||||||||||  |||| |||||| |||  ||| ||||||| |||||||||||||   ||||||||||| |||  ||||||  ||||||||||||    
T  1432 aaatattccgctgcaaaattaatgatgatcttg--aaggatgttta-ttaaatagatttt---atattctattttagattttttgaaaatgtagtgtgac 1339  T
Q  150 atgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttacaaa 223  Q
    ||||||||| |||  ||||||||||   ||     |||||||| ||| ||||||||||||||| ||||||||||    
T  1338 atgcccgtttgggaattactctgatgcatgtttatttattattaaattgattttgggaaacggggtgttacaaa 1265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 174
Target Start/End: Original strand, 17534 - 17613
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccg-ttggggttttactctgat 174  Q
    |||||||||| |||| |||||||||||||||||| |||||  |||||| |||||||||||| ||||| ||||||||||||    
T  17534 attaaatagagttttttatattctatttaagaaaatttgaaaatgtagcgtgacatgcccgtttgggattttactctgat 17613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 1332 - 1395
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggtt-ttactctgat 174  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||||||    
T  1332 tatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggttattactctgat 1395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1615 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1615
Description:

Target: scaffold1615; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 1086 - 1196
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacg 211  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||| |||  ||||||||||   ||     |||||| ||||| ||||||||||||||    
T  1086 tatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgtttgtttattaattaatagattttgggaaacg 1185  T
Q  212 gtgtgttacaa 222  Q
    | |||||||||    
T  1186 gggtgttacaa 1196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 8365 - 8268
Alignment:
Q  55 ttccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcc 154  Q
    |||||||||||  |||| ||||||||||  ||| ||||||| |||||||||||||   ||||||||||||| |||||||||  |||||||||||||||||    
T  8365 ttccgctgcaaaattaatgatgattttg--aaggatgttta-ttaaatagatttt---atattctatttaataaattttgaaaatgtagtgtgacatgcc 8272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 32297 - 32359
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||| ||||||||  ||||||||||||||||||||| |||||||||| ||||    
T  32297 tatattctatttaaggaattttgaaaatgtagtgtgacatgcccgtttgggttttactttgat 32359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 84 - 221
Target Start/End: Original strand, 51612 - 51749
Alignment:
Q  84 gaagaatgtttaattaaatagatttttatatattctatttaagaaattt-tgatga-tgtagtgtgacatgcccgtt-ggggttttactctgattgttga 180  Q
    |||| |||||| |||||||||||||||||||  |||||||||||  ||| | || | |||  |||||||||| |||| ||||||||||||||||  ||||    
T  51612 gaaggatgttttattaaatagatttttatat--tctatttaagatgtttattataaatgtgatgtgacatgctcgtttggggttttactctgata-ttga 51708  T
Q  181 aatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    | ||||||||||||||  |||||||||||||| ||||||||    
T  51709 attattattatttaattaattttgggaaacggggtgttaca 51749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 6515 - 6633
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||||||||||||| |  |||  ||||||||||  ||| ||||||| |||||||||||||   |||||||||||||||||||||||  ||||| ||||||    
T  6515 aaatattccgctgctaaattagtgatgattttg--aaggatgttta-ttaaatagatttt---atattctatttaagaaattttgaaaatgtaatgtgac 6608  T
Q  150 atgcccgttggggttttactctgat 174  Q
    || |||||| |||  ||||||||||    
T  6609 atacccgtttgggaattactctgat 6633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 1763 - 1826
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggtt-ttactctgat 174  Q
    ||||||||||||||||||||||||  |||||||||||||||||| || ||||| ||||||||||    
T  1763 tatattctatttaagaaattttgaaaatgtagtgtgacatgcccatttgggttattactctgat 1826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 8699 - 8762
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggtt-ttactctgat 174  Q
    ||||||||||||||||||||||||  |||||||||||||||||| || ||||| ||||||||||    
T  8699 tatattctatttaagaaattttgaaaatgtagtgtgacatgcccatttgggttattactctgat 8762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 16729 - 16792
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggtt-ttactctgat 174  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||||| ||||| ||||||||||    
T  16729 tatattctatttaagaaattttgaaaatgtattgtgacatgcccgtttgggttattactctgat 16792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 5810 - 5876
Alignment:
Q  84 gaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgc 153  Q
    |||| |||||||||||||||| ||||   |||||||||||||||||||||||  ||||||||||||||||    
T  5810 gaaggatgtttaattaaatagttttt---atattctatttaagaaattttgaaaatgtagtgtgacatgc 5876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 74859 - 74922
Alignment:
Q  112 tatattctatttaagaaattttgat-gatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||| |||||  ||||||||    
T  74859 tatattctatttaagaaattttgataaatgtagtgtgacatgcccgtttgggttaaactctgat 74922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 7394 - 7504
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacg 211  Q
    |||||||||||||||||| |||||  |||||||| |||||||||||| |||  ||||||||||   ||     |||||| ||||| ||||||||||||||    
T  7394 tatattctatttaagaaaatttgaaaatgtagtgcgacatgcccgtttgggaattactctgatgcatgtttgtttattaattaattgattttgggaaacg 7493  T
Q  212 gtgtgttacaa 222  Q
    | |||||||||    
T  7494 gggtgttacaa 7504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 17608 - 17718
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacg 211  Q
    |||||||||||||||||| |||||  |||||||| |||||||||||| |||  ||||||||||   ||     |||||| ||||| ||||||||||||||    
T  17608 tatattctatttaagaaaatttgaaaatgtagtgcgacatgcccgtttgggaattactctgatgcatgtttgtttattaattaattgattttgggaaacg 17707  T
Q  212 gtgtgttacaa 222  Q
    | |||||||||    
T  17708 gggtgttacaa 17718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 29289 - 29228
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||||||||||| || ||||||||||||||||||| ||| | |||||||||    
T  29289 tatattctatttaagaaattttgaaga-gtagtgtgacatgcccgtttgggatatactctgat 29228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1488 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 77 - 158
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||  |||||||| ||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||    
T  77 gtttaattaaatag--ttttatat-ttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1340 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1340
Description:

Target: scaffold1340; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 1915 - 1859
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgccc 155  Q
    ||||||||||||||   |||||||||||||||||||||||  ||||||||||||||||||    
T  1915 attaaatagatttt---atattctatttaagaaattttgaaaatgtagtgtgacatgccc 1859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 166 - 247
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||  |||||||| ||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||    
T  166 gtttaattaaatag--ttttatat-ttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 174
Target Start/End: Complemental strand, 5038 - 4956
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggtt-ttactctgat 174  Q
    |||||||||||||||| |||    || ||||||||||||||||||||  |||||||||||||||||| || ||||| ||||||||||    
T  5038 atgtttaattaaatagtttt----attttctatttaagaaattttgaaaatgtagtgtgacatgcccatttgggttattactctgat 4956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 14070 - 14144
Alignment:
Q  98 taaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||| || ||  ||||||||||||||||  ||||||||||||||||||||| |||  ||||||||||    
T  14070 taaatagatttttaaatttt--atttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgat 14144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 8644 - 8762
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttg-atgatgtagtgtga 148  Q
    ||||||||||||||||  |||| |||| |||   |||| |||||||||||||||||||||   |||  ||||||||||||||||| || | |||||||||    
T  8644 aaatattccgctgcaaaattaatgatgtttt---gaaggatgtttaattaaatagatttt---ataggctatttaagaaattttggatta-gtagtgtga 8736  T
Q  149 catgcccgttggggttttactctgat 174  Q
    |||||||||| ||  |||||||||||    
T  8737 catgcccgtttggaatttactctgat 8762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 23135 - 23253
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttg-atgatgtagtgtga 148  Q
    ||||||||||||||||  |||| |||| |||   |||| |||||||||||||||| ||||   |||  ||||||||||||||||| || | |||||||||    
T  23135 aaatattccgctgcaaaattaatgatgtttt---gaaggatgtttaattaaatagttttt---ataggctatttaagaaattttggatta-gtagtgtga 23227  T
Q  149 catgcccgttggggttttactctgat 174  Q
    ||||||| || ||  |||||||||||    
T  23228 catgcccatttggaatttactctgat 23253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 17708 - 17826
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    ||||||||||||||||  |||| ||||||||||  ||| ||||||| |  |||||| |||   |||||||||||||||||||||||  ||  ||||||||    
T  17708 aaatattccgctgcaaaattaatgatgattttg--aaggatgtttatt--aatagagttt---atattctatttaagaaattttgaaaattaagtgtgac 17800  T
Q  150 atgcccgttggggtt-ttactctgat 174  Q
    ||||||||| ||||| ||||||||||    
T  17801 atgcccgtttgggttattactctgat 17826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 2952 - 3071
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    ||||||||||||||||  |||| |||||||||  |||| |||||| |||||||||| ||||   |||| |||||||||||||||||  ||   |||||||    
T  2952 aaatattccgctgcaaaattaatgatgatttt--gaaggatgttt-attaaatagagtttt---tattttatttaagaaattttgaaaattatgtgtgac 3045  T
Q  150 atgcccgttggggtt-ttactctgat 174  Q
    ||||||||| ||||| ||||||||||    
T  3046 atgcccgtttgggttattactctgat 3071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 30879 - 30960
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||  |||||||| ||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||    
T  30879 gtttaattaaatag--ttttatat-ttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 30960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 36280 - 36361
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||  |||||||| ||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||    
T  36280 gtttaattaaatag--ttttatat-ttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 36361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 40736 - 40662
Alignment:
Q  98 taaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||||  ||||||||||||||||||||   ||||||||||||||| ||| |||||  ||||||||    
T  40736 taaatagatttttatat--tctatttaagaaattttgatatagtagtgtgacatgcctgtttgggttgaactctgat 40662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Complemental strand, 87253 - 87172
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||  |||||||| ||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||    
T  87253 gtttaattaaatag--ttttatat-ttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 87172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 221
Target Start/End: Complemental strand, 37364 - 37204
Alignment:
Q  55 ttccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcc 154  Q
    |||||||||||  |||| ||||||||||  ||| ||| ||| |||||||||||||   |||||||||||||||||  ||||  |||||||||||||| ||    
T  37364 ttccgctgcaaaattaatgatgattttg--aaggatgctta-ttaaatagatttt---atattctatttaagaaaacttgaaaatgtagtgtgacatacc 37271  T
Q  155 cgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    |||| |||  ||||||||||   ||     |||||| ||||| ||||||||||||||| ||||||||    
T  37270 cgtttgggaattactctgatgcatgtttatttattaattaattgattttgggaaacggggtgttaca 37204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 102368 - 102431
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgc 153  Q
    ||||||||| ||||| |||||| || ||||||||||||||||||||||   ||||||||||||||    
T  102368 atgtttaat-aaataaatttttttacattctatttaagaaattttgatatagtagtgtgacatgc 102431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 38205 - 38322
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    ||||||||||||||||  |||| |||| |||   |||| |||||||||||||||| |||    |||| |||||||||||| |||||    ||||||||||    
T  38205 aaatattccgctgcaaaattaatgatgtttt---gaaggatgtttaattaaatagtttt----atatgctatttaagaaaatttgaattagtagtgtgac 38297  T
Q  150 atgcccgttggggttttactctgat 174  Q
    ||||||||| ||| |||||||||||    
T  38298 atgcccgtttgggatttactctgat 38322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2175 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold2175
Description:

Target: scaffold2175; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 317 - 372
Alignment:
Q  107 ttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggt 163  Q
    |||||||| ||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  317 ttttatat-ttctatttaagaaattttgaaaatgaagtgtgacatgcccgttggggt 372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000007; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 115229 - 115178
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggtt 164  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||||||||    
T  115229 tatattctatttaagaaattttgaaaa-gtagtgtgacatgcccgttggggtt 115178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 174
Target Start/End: Complemental strand, 320588 - 320513
Alignment:
Q  96 attaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||    |||||||||| ||||||| ||  ||||||||||||||||||||| |||  ||||||||||    
T  320588 attaaatagatttttc---attctatttatgaaatttggaaaatgtagtgtgacatgcccgtttgggaattactctgat 320513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 174
Target Start/End: Complemental strand, 326281 - 326222
Alignment:
Q  115 attctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||| ||||| ||||  ||||||||||||||||||||| |||  ||||||||||    
T  326281 attctatttatgaaatgttgaaaatgtagtgtgacatgcccgtttgggaattactctgat 326222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 130380 - 130441
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||| ||||||||||| ||||  | ||||||||||||||||||||||| | |||||||||    
T  130380 tatattccatttaagaaatattgaaaa-gtagtgtgacatgcccgttggggatatactctgat 130441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 780 - 718
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggtt-ttactctgat 174  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||| ||||| ||||||||||    
T  780 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtttgggttattactctgat 718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0947 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0947
Description:

Target: scaffold0947; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 471 - 537
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    |||||||||||||||| ||||   |||||||||||||||||||||||  ||||||| | |||||||||||    
T  471 atgtttaattaaatagttttt---atattctatttaagaaattttgaaaatgtagtataacatgcccgtt 537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 175
Target Start/End: Complemental strand, 7974 - 7915
Alignment:
Q  116 ttctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgatt 175  Q
    |||||||||||||||||| |  | ||||||||||||||||||| ||| ||||||||||||    
T  7974 ttctatttaagaaatttttaaaaagtagtgtgacatgcccgtttgggatttactctgatt 7915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 10425 - 10536
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaatattattatttaatggattttgggaaacg 211  Q
    |||||||||||| |||  ||||||  ||||||||||||||||||||| |||  ||||||||||   ||     |||||||| ||| ||||||||||||||    
T  10425 tatattctattttagattttttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgtttatttattattaaattgattttgggaaacg 10524  T
Q  212 gtgtgttacaaa 223  Q
    | ||||||||||    
T  10525 gggtgttacaaa 10536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 222
Target Start/End: Complemental strand, 37903 - 37797
Alignment:
Q  116 ttctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaata-ttattatttaatggattttgggaaacggtg 214  Q
    |||||||||||||| ||| |  | ||||||||||||| ||||| ||| |||||||||| || |||| || |||||||| ||| ||||||||| ||||| |    
T  37903 ttctatttaagaaaattttaaaaagtagtgtgacatgtccgtttgggatttactctga-tgatgaattatttattattaaattgattttgggtaacgggg 37805  T
Q  215 tgttacaa 222  Q
    ||||||||    
T  37804 tgttacaa 37797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 221
Target Start/End: Original strand, 19986 - 20095
Alignment:
Q  112 tatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaat-attattatttaatggattttgggaaa 209  Q
    ||||||||||||||||||  |||||  ||||||||||||||| ||||| |||||||||||| | ||||||| | |||||||||||||   ||||||| ||    
T  19986 tatattctatttaagaaaaatttgaatatgtagtgtgacatgtccgtt-gggttttactct-aatgttgaattaattattatttaattacttttgggtaa 20083  T
Q  210 cggtgtgttaca 221  Q
    ||| ||||||||    
T  20084 cggggtgttaca 20095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 221
Target Start/End: Original strand, 22806 - 22915
Alignment:
Q  112 tatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgattgttgaaat-attattatttaatggattttgggaaa 209  Q
    ||||||||||||||||||  |||||  ||||||||||||||| ||||| |||||||||||| | ||||||| | |||||||||||||   ||||||| ||    
T  22806 tatattctatttaagaaaaatttgaatatgtagtgtgacatgtccgtt-gggttttactct-aatgttgaattaattattatttaattacttttgggtaa 22903  T
Q  210 cggtgtgttaca 221  Q
    ||| ||||||||    
T  22904 cggggtgttaca 22915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 222
Target Start/End: Complemental strand, 25415 - 25307
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat-tgttgaaatattattatttaatggattttgggaaac 210  Q
    |||||||||||||||||   || |  |||||||||||||||||||||  || ||||||||||| |||| |   |||||||||||||   ||||||| |||    
T  25415 tatattctatttaagaatgcttaaaaatgtagtgtgacatgcccgtttaggatttactctgatgtgttta---attattatttaattacttttgggtaac 25319  T
Q  211 ggtgtgttacaa 222  Q
    || |||||||||    
T  25318 ggggtgttacaa 25307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0742 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0742
Description:

Target: scaffold0742; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 3134 - 3055
Alignment:
Q  144 tgtgacatgcccgttggggttttactctgattgttga---aatattattatttaatggattttgggaaacggtgtgttaca 221  Q
    ||||||||||||||||||||||| |||||| | ||||   | |||||||||||||| ||||||||||||| | ||||||||    
T  3134 tgtgacatgcccgttggggttttgctctga-tattgaattattattattatttaattgattttgggaaaccgggtgttaca 3055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 210 - 276
Alignment:
Q  108 tttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||| |||||||||||||||||||    ||||||||||||||||||| |||  ||||||||||    
T  210 tttatataatctatttaagaaattttgaaatagtagtgtgacatgcccgtttgggaattactctgat 276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 8824 - 8763
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||| ||| | |||||||||    
T  8824 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtttgggatatactctgat 8763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 29247 - 29185
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||||||||||    |||||||||||||||||||||| |  |||||||||    
T  29247 tatattctatttaagaaattttgaattagtagtgtgacatgcccgttgggttaatactctgat 29185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 56613 - 56674
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||| ||| | |||||||||    
T  56613 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtttgggatatactctgat 56674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 64430 - 64369
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||| |||||||||||||||||||  | ||||||||||||||||||| ||||| |||||||||    
T  64430 tataatctatttaagaaattttgaaaa-gtagtgtgacatgcccgtttgggttatactctgat 64369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 47716 - 47797
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||  |||||| | ||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||    
T  47716 gtttaattaaatag--ttttattt-ttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 47797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 53122 - 53203
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||  |||||| | ||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||    
T  53122 gtttaattaaatag--ttttattt-ttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 53203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 208246 - 208307
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||| ||| | |||||||||    
T  208246 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtttgggatatactctgat 208307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 5017 - 5081
Alignment:
Q  91 gtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    |||||||||||||||||||   ||||||||||||||||| |||||  | | |||||||||||||||||    
T  5017 gtttaattaaatagatttt---atattctatttaagaaaatttgaacaagaagtgtgacatgcccgtt 5081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 9014 - 8966
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggg 161  Q
    ||||||||||||||||||||||||  || |||||||||||||||||||||    
T  9014 tatattctatttaagaaattttgaaaat-tagtgtgacatgcccgttggg 8966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 20132 - 20084
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggg 161  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||||||    
T  20132 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgttggg 20084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 450 - 385
Alignment:
Q  109 ttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||||||| |||    | ||||||||||||||||||| ||| |||||||||||    
T  450 ttatatattctatttaagaaaatttttaaaagtagtgtgacatgcccgtttgggatttactctgat 385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 37840 - 37763
Alignment:
Q  95 aattaaatagatttttatatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||  |||||||| ||||||||||||||  |||||  ||||||||||||||||||||| ||| |||||||||||    
T  37840 aattaaatag--ttttatat-ttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgat 37763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 174
Target Start/End: Complemental strand, 6820 - 6703
Alignment:
Q  52 atattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacat 151  Q
    |||||||||||||| || || || |||||||  ||| ||||||| ||||||||||||||| ||  ||||||||||| |||||||  || ||||||||| |    
T  6820 atattccgctgcaaattaaatgaagattttg--aaggatgttta-ttaaatagatttttacat--tctatttaagacattttgaaaatatagtgtgacgt 6726  T
Q  152 gcccgttggggttttactctgat 174  Q
     |||||| |||  ||||||||||    
T  6725 acccgtttgggaattactctgat 6703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 155
Target Start/End: Complemental strand, 6451 - 6388
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgacatgccc 155  Q
    |||||||||||||||| ||||   ||||||||||||||||||||| |  |||| |||||||||||||    
T  6451 atgtttaattaaatagttttt---atattctatttaagaaatttttaaaatgtggtgtgacatgccc 6388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 174
Target Start/End: Original strand, 103612 - 103672
Alignment:
Q  115 attctatttaagaaattttgatgatgtagtgtgacatgcccgttggggtt-ttactctgat 174  Q
    |||||||||||||||||||||   || ||||||||||||||||| ||||| ||||||||||    
T  103612 attctatttaagaaattttgaaattgaagtgtgacatgcccgtttgggttattactctgat 103672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 143409 - 143340
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttgatgat-gtagtgtgacatgcccgttggg 161  Q
    |||||||||||||||| |||    ||||||||||||||| |||||||  || ||||||||||||||||||||||    
T  143409 atgtttaattaaatagtttt----atattctatttaagatattttgaaaatagtagtgtgacatgcccgttggg 143340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 173717 - 173778
Alignment:
Q  112 tatattctatttaagaaa-ttttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    |||||||||||||||||| ||||||  | ||||||||||||||||||| ||| |||||||||||    
T  173717 tatattctatttaagaaaattttga--aagtagtgtgacatgcccgtttgggatttactctgat 173778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 2201 - 2264
Alignment:
Q  112 tatattctatttaagaaat-tttgatgatgtagtgtgacatgcccgttggggttttactctgat 174  Q
    ||||||||||||||||||  |||||  |||||||||||||| |||||| ||| |||||||||||    
T  2201 tatattctatttaagaaaaatttgaaaatgtagtgtgacatacccgtttgggatttactctgat 2264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 158
Target Start/End: Original strand, 27397 - 27498
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    |||||||||||||||| || || |||| |||||  ||| ||||||| ||||||||   ||| ||||||||||||||||||||||||  |||| |||||||    
T  27397 aaatattccgctgcaaatt-aatgatgtttttg--aaggatgttta-ttaaatag---tttgtatattctatttaagaaattttgaaaatgttgtgtgac 27489  T
Q  150 atgcccgtt 158  Q
    ||| |||||    
T  27490 atgtccgtt 27498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 62470 - 62516
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttg 159  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||||    
T  62470 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgttg 62516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 61701 - 61747
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttg 159  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||||    
T  61701 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgttg 61747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 66
Target Start/End: Original strand, 3919 - 3949
Alignment:
Q  36 ttatttaagttgaaaaatattccgctgcaag 66  Q
    |||||||||||||||||||||||||||||||    
T  3919 ttatttaagttgaaaaatattccgctgcaag 3949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0661 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 4778 - 4823
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  4778 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 4823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 689 - 734
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  689 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 4781 - 4826
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  4781 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 4826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 6789 - 6744
Alignment:
Q  89 atgtttaattaaatagatttttatatattctatttaagaaattttga 135  Q
    |||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  6789 atgtttaattaaatagattttt-tatattcaatttaaggaattttga 6744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 159
Target Start/End: Original strand, 16992 - 17104
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttt---tatatattctatttaagaaattttgatgatgtagtgt 146  Q
    |||||||||||||| ||||||| ||  |||||| |||  | |||| ||||||||||||||   |||| ||||||||||  ||||||| |||| | | |||    
T  16992 aaatattccgctgcgagtttaatgacaattttgtgaatgacgtttgattaaatagattttttatatacattctatttagtaaattttaatgaagaaatgt 17091  T
Q  147 gacatgcccgttg 159  Q
    | |||||||||||    
T  17092 ggcatgcccgttg 17104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 18111 - 18156
Alignment:
Q  112 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  18111 tatattctatttaagaaattttga-aaagtagtgtgacatgcccgtt 18156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 4407 - 4456
Alignment:
Q  109 ttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgttg 159  Q
    |||||||||||||||||||||||||||  | | ||||||||||||||||||    
T  4407 ttatatattctatttaagaaattttga-aaagcagtgtgacatgcccgttg 4456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 3155 - 3199
Alignment:
Q  113 atattctatttaagaaattttgatgatgtagtgtgacatgcccgtt 158  Q
    |||||||||||||| |||||||| || |||||||||||||||||||    
T  3155 atattctatttaaggaattttga-gaagtagtgtgacatgcccgtt 3199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 7891 - 8008
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    ||||||||||||||||  |||| |||| |||   |||| |||||||||||||||| |||    |||| |||||||||||| |||||    ||||||||||    
T  7891 aaatattccgctgcaaaattaatgatgtttt---gaaggatgtttaattaaatagtttt----atatgctatttaagaaaatttgaattagtagtgtgac 7983  T
Q  150 atgcccgttggggttttactctgat 174  Q
    |||| |||| ||| |||||| ||||    
T  7984 atgctcgtttgggatttactgtgat 8008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 174
Target Start/End: Complemental strand, 369979 - 369862
Alignment:
Q  50 aaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtgac 149  Q
    ||||||||||||||||  |||| |||| |||   |||  |||||||||||||||| |||    |||| |||||||||||| |||||    ||||||||||    
T  369979 aaatattccgctgcaaaattaatgatgtttt---gaaagatgtttaattaaatagtttt----atatgctatttaagaaaatttgaattagtagtgtgac 369887  T
Q  150 atgcccgttggggttttactctgat 174  Q
    ||||||||| ||| |||| ||||||    
T  369886 atgcccgtttgggatttattctgat 369862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1684 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1684
Description:

Target: scaffold1684; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 174
Target Start/End: Complemental strand, 1042 - 923
Alignment:
Q  49 aaaatattccgctgcaagtttaacgatgattttgggaagaatgtttaattaaatagatttttatatattctatttaagaaattttgatgatgtagtgtga 148  Q
    |||||||||||||||||||| || |||||||||  |||| |||| | |||||||||||||   |||||| ||||||  |||||||||    | |||||||    
T  1042 aaaatattccgctgcaagttaaatgatgatttt--gaaggatgtgt-attaaatagattt---tatattttatttacaaaattttgaattagaagtgtga 949  T
Q  149 catgcccgttggggttttactctgat 174  Q
    ||||||| ||||| |  |||||||||    
T  948 catgcccattgggttaatactctgat 923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 22144 - 22080
Alignment:
Q  112 tatattctatttaagaaattttg-atgatgtagtgtgacatgcccgttggggtt-ttactctgat 174  Q
    |||||||||||||||||| |||| |  ||| ||||||||||||||||| ||||| ||||||||||    
T  22144 tatattctatttaagaaaatttgaaaaatgaagtgtgacatgcccgtttgggttattactctgat 22080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University