View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7469_high_14 (Length: 262)

Name: NF7469_high_14
Description: NF7469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7469_high_14
NF7469_high_14
[»] chr7 (34 HSPs)
chr7 (14-254)||(34195951-34196192)
chr7 (14-254)||(34194526-34194768)
chr7 (14-254)||(7369279-7369523)
chr7 (14-254)||(16439433-16439676)
chr7 (14-254)||(23765151-23765389)
chr7 (14-254)||(30241515-30241753)
chr7 (14-248)||(16036807-16037040)
chr7 (14-248)||(16051534-16051767)
chr7 (63-254)||(16454371-16454565)
chr7 (14-248)||(10839203-10839442)
chr7 (14-235)||(15854149-15854370)
chr7 (118-254)||(16498428-16498566)
chr7 (118-254)||(16507735-16507873)
chr7 (118-254)||(16522839-16522977)
chr7 (120-254)||(18627135-18627273)
chr7 (121-254)||(48217295-48217432)
chr7 (120-254)||(4186455-4186592)
chr7 (92-218)||(4055413-4055538)
chr7 (121-248)||(10921289-10921418)
chr7 (121-248)||(36878973-36879103)
chr7 (14-248)||(10851862-10852092)
chr7 (120-254)||(15353177-15353316)
chr7 (123-248)||(13735982-13736111)
chr7 (117-251)||(15004550-15004689)
chr7 (120-248)||(11414210-11414342)
chr7 (121-254)||(2150162-2150297)
chr7 (121-254)||(2165373-2165508)
chr7 (121-248)||(5246383-5246511)
chr7 (14-242)||(13895113-13895338)
chr7 (120-248)||(11429193-11429325)
chr7 (121-254)||(2969037-2969173)
chr7 (121-248)||(20592846-20592969)
chr7 (121-254)||(11361400-11361536)
chr7 (14-83)||(15004721-15004785)
[»] chr5 (36 HSPs)
chr5 (14-254)||(28898205-28898446)
chr5 (14-254)||(28934600-28934841)
chr5 (14-254)||(22898991-22899230)
chr5 (14-254)||(30465555-30465794)
chr5 (14-250)||(24612085-24612323)
chr5 (14-250)||(24671711-24671949)
chr5 (14-250)||(24708487-24708725)
chr5 (14-250)||(24741481-24741719)
chr5 (14-250)||(24754250-24754488)
chr5 (14-235)||(22268701-22268924)
chr5 (35-254)||(20579948-20580173)
chr5 (14-235)||(25210953-25211176)
chr5 (14-235)||(25275105-25275328)
chr5 (14-178)||(25195591-25195754)
chr5 (120-254)||(24947703-24947839)
chr5 (120-254)||(24980568-24980704)
chr5 (120-248)||(20193486-20193617)
chr5 (37-175)||(27285577-27285719)
chr5 (121-254)||(23887810-23887945)
chr5 (120-254)||(7816238-7816379)
chr5 (123-254)||(24692594-24692727)
chr5 (121-254)||(23902453-23902588)
chr5 (121-248)||(3944040-3944168)
chr5 (14-242)||(21501238-21501461)
chr5 (117-244)||(22347723-22347852)
chr5 (14-178)||(19863750-19863906)
chr5 (123-242)||(37294623-37294744)
chr5 (121-248)||(18061420-18061550)
chr5 (121-248)||(22445799-22445929)
chr5 (136-248)||(32449304-32449418)
chr5 (15-156)||(11559926-11560068)
chr5 (15-156)||(11545867-11546010)
chr5 (121-248)||(30930229-30930362)
chr5 (129-183)||(37750718-37750772)
chr5 (129-183)||(37765963-37766017)
chr5 (121-161)||(30957111-30957151)
[»] chr1 (25 HSPs)
chr1 (14-254)||(16663043-16663284)
chr1 (14-254)||(31447427-31447673)
chr1 (14-254)||(20362087-20362327)
chr1 (14-254)||(20548584-20548824)
chr1 (35-254)||(16405779-16406000)
chr1 (35-254)||(20329619-20329842)
chr1 (14-235)||(16197506-16197726)
chr1 (35-254)||(20343163-20343386)
chr1 (14-235)||(16212515-16212735)
chr1 (35-235)||(21730497-21730701)
chr1 (14-180)||(9192799-9192966)
chr1 (118-254)||(4147230-4147369)
chr1 (121-251)||(5137873-5138007)
chr1 (132-254)||(26798232-26798356)
chr1 (121-248)||(18293702-18293831)
chr1 (121-248)||(21481676-21481805)
chr1 (130-235)||(21731625-21731732)
chr1 (121-248)||(21886802-21886931)
chr1 (14-178)||(16230686-16230842)
chr1 (123-245)||(15816175-15816301)
chr1 (127-242)||(15434317-15434435)
chr1 (121-225)||(21505902-21506005)
chr1 (120-248)||(18289300-18289434)
chr1 (14-242)||(20456589-20456813)
chr1 (14-80)||(15434209-15434270)
[»] chr8 (18 HSPs)
chr8 (14-254)||(28503665-28503910)
chr8 (120-254)||(21337070-21337210)
chr8 (121-254)||(21377031-21377170)
chr8 (121-254)||(5516245-5516380)
chr8 (120-254)||(15324582-15324722)
chr8 (120-254)||(15504951-15505091)
chr8 (120-248)||(28263098-28263230)
chr8 (14-178)||(15018084-15018240)
chr8 (117-251)||(11342376-11342515)
chr8 (121-248)||(33242436-33242566)
chr8 (121-248)||(33271780-33271910)
chr8 (127-242)||(21965645-21965763)
chr8 (118-248)||(2126605-2126739)
chr8 (118-248)||(2141762-2141896)
chr8 (127-242)||(22070638-22070756)
chr8 (14-83)||(11342547-11342611)
chr8 (121-254)||(16254170-16254308)
chr8 (121-161)||(18786396-18786436)
[»] chr4 (37 HSPs)
chr4 (14-254)||(17241694-17241939)
chr4 (14-248)||(15387264-15387499)
chr4 (35-254)||(15238290-15238514)
chr4 (14-248)||(17095017-17095260)
chr4 (35-254)||(1662980-1663203)
chr4 (14-254)||(15219517-15219758)
chr4 (14-248)||(1895775-1896011)
chr4 (14-248)||(14239835-14240072)
chr4 (35-254)||(26406748-26406971)
chr4 (14-255)||(12785602-12785845)
chr4 (14-235)||(16244848-16245068)
chr4 (14-229)||(26461233-26461443)
chr4 (120-254)||(19639379-19639516)
chr4 (14-235)||(17087052-17087272)
chr4 (118-254)||(18044093-18044232)
chr4 (121-254)||(22727341-22727476)
chr4 (121-254)||(14675674-14675810)
chr4 (132-254)||(5199753-5199877)
chr4 (117-251)||(15299283-15299421)
chr4 (121-248)||(13441228-13441357)
chr4 (117-251)||(15268941-15269080)
chr4 (121-254)||(9247597-9247733)
chr4 (121-248)||(17009600-17009729)
chr4 (121-248)||(17023565-17023694)
chr4 (123-242)||(18465019-18465140)
chr4 (123-242)||(20757405-20757526)
chr4 (123-242)||(20763796-20763917)
chr4 (127-242)||(15395861-15395979)
chr4 (127-242)||(15399786-15399904)
chr4 (14-178)||(16281150-16281306)
chr4 (121-248)||(14657240-14657371)
chr4 (121-248)||(30278443-30278572)
chr4 (127-242)||(15376037-15376155)
chr4 (121-248)||(14658564-14658697)
chr4 (121-242)||(46660312-46660436)
chr4 (129-183)||(27167942-27167996)
chr4 (14-80)||(20757306-20757367)
[»] chr6 (34 HSPs)
chr6 (14-254)||(12963659-12963901)
chr6 (14-254)||(14854637-14854876)
chr6 (14-254)||(28196997-28197240)
chr6 (14-254)||(25179533-25179775)
chr6 (35-247)||(4112513-4112728)
chr6 (14-248)||(12048022-12048256)
chr6 (14-248)||(17028959-17029192)
chr6 (35-218)||(24376771-24376958)
chr6 (15-247)||(20134554-20134788)
chr6 (15-247)||(22198081-22198315)
chr6 (17-162)||(30720649-30720793)
chr6 (121-254)||(12621550-12621685)
chr6 (14-251)||(17086552-17086790)
chr6 (121-248)||(3043672-3043801)
chr6 (121-254)||(19900368-19900503)
chr6 (14-156)||(20156257-20156397)
chr6 (14-156)||(22176435-22176575)
chr6 (121-254)||(18814794-18814930)
chr6 (14-178)||(924307-924463)
chr6 (120-248)||(24295084-24295216)
chr6 (120-248)||(24309102-24309234)
chr6 (121-248)||(15401846-15401975)
chr6 (121-248)||(15413633-15413762)
chr6 (121-248)||(15429226-15429355)
chr6 (121-248)||(34471157-34471286)
chr6 (123-242)||(20424651-20424772)
chr6 (132-248)||(22923622-22923741)
chr6 (132-248)||(22939334-22939453)
chr6 (132-248)||(23861779-23861898)
chr6 (121-248)||(26984707-26984835)
chr6 (121-248)||(27035770-27035898)
chr6 (123-178)||(8765530-8765584)
chr6 (121-254)||(13288462-13288596)
chr6 (121-254)||(13303429-13303563)
[»] scaffold0393 (1 HSPs)
scaffold0393 (14-248)||(7107-7344)
[»] chr2 (23 HSPs)
chr2 (14-254)||(10115366-10115607)
chr2 (14-254)||(17260195-17260436)
chr2 (14-248)||(21692913-21693146)
chr2 (14-248)||(21707695-21707928)
chr2 (14-219)||(18085747-18085950)
chr2 (120-254)||(20831682-20831818)
chr2 (121-248)||(12651125-12651254)
chr2 (121-248)||(12666046-12666175)
chr2 (121-248)||(28269273-28269402)
chr2 (121-254)||(34263367-34263502)
chr2 (121-254)||(34306166-34306301)
chr2 (117-242)||(19446122-19446252)
chr2 (117-242)||(19460931-19461061)
chr2 (127-251)||(27399658-27399785)
chr2 (127-242)||(19556383-19556501)
chr2 (117-248)||(28877781-28877915)
chr2 (117-248)||(28892991-28893125)
chr2 (121-254)||(39757568-39757703)
chr2 (127-251)||(27388597-27388724)
chr2 (123-242)||(22700172-22700293)
chr2 (14-80)||(19556548-19556609)
chr2 (14-80)||(27388489-27388550)
chr2 (14-80)||(27399550-27399611)
[»] chr3 (44 HSPs)
chr3 (14-248)||(28165893-28166135)
chr3 (14-254)||(15363909-15364150)
chr3 (14-248)||(17787796-17788028)
chr3 (14-248)||(19089317-19089549)
chr3 (14-254)||(14141583-14141825)
chr3 (14-248)||(18525835-18526070)
chr3 (14-248)||(23011663-23011897)
chr3 (35-248)||(19627679-19627896)
chr3 (31-254)||(11646848-11647073)
chr3 (36-248)||(4654099-4654314)
chr3 (118-254)||(15882100-15882238)
chr3 (121-254)||(18046812-18046948)
chr3 (121-254)||(18062875-18063011)
chr3 (118-254)||(15897279-15897417)
chr3 (121-248)||(4883054-4883183)
chr3 (121-248)||(8278919-8279048)
chr3 (121-248)||(8307729-8307858)
chr3 (121-248)||(22641376-22641505)
chr3 (37-178)||(19704917-19705065)
chr3 (121-254)||(5662779-5662915)
chr3 (121-248)||(10600807-10600936)
chr3 (121-248)||(18003160-18003289)
chr3 (121-247)||(8291513-8291641)
chr3 (121-254)||(5647357-5647494)
chr3 (121-248)||(4684548-4684677)
chr3 (121-248)||(8226605-8226734)
chr3 (121-248)||(11260927-11261058)
chr3 (123-242)||(10929704-10929825)
chr3 (123-178)||(15475832-15475886)
chr3 (123-178)||(29942719-29942773)
chr3 (123-178)||(29991873-29991927)
chr3 (123-242)||(16614730-16614852)
chr3 (123-242)||(16631053-16631175)
chr3 (123-242)||(22052008-22052130)
chr3 (123-242)||(36131249-36131364)
chr3 (123-178)||(15371628-15371682)
chr3 (121-254)||(15730545-15730685)
chr3 (121-254)||(15745630-15745770)
chr3 (117-248)||(1999805-1999939)
chr3 (121-248)||(4694632-4694761)
chr3 (121-219)||(35876310-35876408)
chr3 (121-219)||(35891380-35891478)
chr3 (14-80)||(15371529-15371590)
chr3 (14-80)||(36131402-36131463)
[»] scaffold0055 (1 HSPs)
scaffold0055 (14-254)||(7253-7491)
[»] scaffold0052 (1 HSPs)
scaffold0052 (14-254)||(77044-77282)
[»] scaffold0021 (2 HSPs)
scaffold0021 (14-248)||(99209-99442)
scaffold0021 (14-248)||(180132-180365)
[»] scaffold0954 (1 HSPs)
scaffold0954 (14-245)||(2811-3042)
[»] scaffold0134 (1 HSPs)
scaffold0134 (14-254)||(23406-23647)
[»] scaffold0143 (1 HSPs)
scaffold0143 (14-248)||(22763-23002)
[»] scaffold0031 (1 HSPs)
scaffold0031 (14-248)||(126034-126274)
[»] scaffold0260 (1 HSPs)
scaffold0260 (35-254)||(5486-5709)
[»] scaffold0184 (1 HSPs)
scaffold0184 (14-235)||(22665-22886)
[»] scaffold0078 (1 HSPs)
scaffold0078 (14-218)||(49979-50179)
[»] scaffold0322 (1 HSPs)
scaffold0322 (14-248)||(17520-17753)
[»] scaffold0092 (1 HSPs)
scaffold0092 (14-235)||(17455-17676)
[»] scaffold0609 (1 HSPs)
scaffold0609 (14-206)||(1376-1564)
[»] scaffold0231 (1 HSPs)
scaffold0231 (121-255)||(26183-26319)
[»] scaffold0206 (1 HSPs)
scaffold0206 (37-218)||(12577-12767)
[»] scaffold0089 (3 HSPs)
scaffold0089 (121-254)||(11305-11440)
scaffold0089 (120-254)||(25381-25519)
scaffold0089 (117-248)||(51531-51664)
[»] scaffold0001 (1 HSPs)
scaffold0001 (121-248)||(72630-72759)
[»] scaffold0109 (3 HSPs)
scaffold0109 (14-242)||(31313-31539)
scaffold0109 (127-242)||(17177-17295)
scaffold0109 (14-83)||(17069-17133)
[»] scaffold0240 (1 HSPs)
scaffold0240 (121-248)||(20359-20488)
[»] scaffold0211 (1 HSPs)
scaffold0211 (123-242)||(10896-11017)
[»] scaffold0389 (1 HSPs)
scaffold0389 (16-175)||(15236-15387)
[»] scaffold0174 (2 HSPs)
scaffold0174 (127-242)||(8497-8615)
scaffold0174 (14-80)||(8389-8450)
[»] scaffold0186 (1 HSPs)
scaffold0186 (132-254)||(13252-13379)


Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 14 - 254
Target Start/End: Complemental strand, 34196192 - 34195951
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcag 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||     
T  34196192 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacacgatacttagaaaaatattctttttttaaaataagcaaattccatcac 34196093  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34196092 ttgaaatttttttcctaataaaccttggagtcaaaactccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 34195993  T
Q  213 ccttttttaataattgaaccaaccattcaccattttcttctc 254  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  34195992 ccttttttaataattgaatcaaccattcaccattttcttctc 34195951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 14 - 254
Target Start/End: Original strand, 34194526 - 34194768
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttt--taaaataagcaaattccatca 111  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||  |||||||||||||||||||||    
T  34194526 cgcacacacgttgtatgatgatttaccggtttagatgtatgcttagggaacgcgatacttagaaaaatactcttttttttaaaataagcaaattccatca 34194625  T
Q  112 gttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttag 211  Q
     |||||||   |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  34194626 cttgaaaaaaatttcctaataaaccttggagtcaaaactccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactgag 34194725  T
Q  212 accttttttaataattgaaccaaccattcaccattttcttctc 254  Q
    || |||||||||||||||||||| |||||||||||||||||||    
T  34194726 actttttttaataattgaaccaatcattcaccattttcttctc 34194768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 14 - 254
Target Start/End: Original strand, 7369279 - 7369523
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt--aaaataagcaaattccatca 111  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||   ||  ||||  ||||||||||||||||||||    
T  7369279 cgcacacacgttgtatgttgatttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaaatatcaattttccaaaataagcaaattccatca 7369378  T
Q  112 gttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttag 211  Q
     |||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7369379 cttgaaattttttttctaataaaccttggagtcaaaactccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttag 7369478  T
Q  212 accttttt--taataattgaaccaaccattcaccattttcttctc 254  Q
    ||||||||  |||||||||||||||||||||||||||||||||||    
T  7369479 acctttttaataataattgaaccaaccattcaccattttcttctc 7369523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 14 - 254
Target Start/End: Complemental strand, 16439676 - 16439433
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcag 112  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||| ||   ||||  ||||||||||||||||||||     
T  16439676 cgcacacacgttgtatgttgatttaccgctttagatgtatgctgaggaaacgcgatacttagaaaaacatcaattttccaaaataagcaaattccatcac 16439577  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  16439576 ttgaaaattctttcctaataaaccttggagtcaaaactccattgaattttccctttattttcttaa-tcaaactcaaatgaactctaattccaacttaga 16439478  T
Q  213 ccttttt---taataattgaaccaaccattcaccattttcttctc 254  Q
    |||||||   |||||||||||||||||||||||||||||||||||    
T  16439477 ccttttttaataataattgaaccaaccattcaccattttcttctc 16439433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 14 - 254
Target Start/End: Original strand, 23765151 - 23765389
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcag 112  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||||||||||||||||||||||   ||||  |||||||| |||||||||||     
T  23765151 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatatcaattttccaaaataagtaaattccatcac 23765246  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23765247 ttgaaaatttt-tcctaataaaccttggagtcaaaactccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 23765345  T
Q  213 ccttttt--taataattgaaccaaccattcaccattttcttctc 254  Q
    | |||||  |||||||| ||||||||||||||||||||||||||    
T  23765346 catttttaataataattcaaccaaccattcaccattttcttctc 23765389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 14 - 254
Target Start/End: Complemental strand, 30241753 - 30241515
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcag 112  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||||||| ||||||||||||||   ||||  ||||||||||||||||||||     
T  30241753 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaaacgcgacacttagaaaaatatcaattttccaaaataagcaaattccatcac 30241658  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    |||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  30241657 ttgaaa-ttttttccaaataaaccttggagtcaaaactccattgaattttccctttattttcttaa-tcaaactcaaatgaactctaattccaacttaga 30241560  T
Q  213 ccttttt---taataattgaaccaaccattcaccattttcttctc 254  Q
    |||||||   |||||||||||||||||||||||||||||||||||    
T  30241559 ccttttttaataataattgaaccaaccattcaccattttcttctc 30241515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 248
Target Start/End: Original strand, 16036807 - 16037040
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcag 112  Q
    |||||||||||||||||    |||||||||||||||||||| ||||| ||||||||||||||||||||||   ||||  ||||||||||||||||||||     
T  16036807 cgcacacacgttgtatg----tttaccgctttagatgtatgtttaggaaacgcgatacttagaaaaatatcaattttccaaaataagcaaattccatcac 16036902  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    |||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  16036903 ttgaaa-ttttttccaaacaaaccttggagtcaaaactccattgaattttccctttattttcttaa-tcaaactcaaatgaactctaattccaacttaga 16037000  T
Q  213 ccttttt----taataattgaaccaaccattcaccatttt 248  Q
    |||||||    |||||||||||||||| ||||||||||||    
T  16037001 cctttttttaataataattgaaccaactattcaccatttt 16037040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 248
Target Start/End: Original strand, 16051534 - 16051767
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcag 112  Q
    |||||||||||||||||    |||||||||||||||||||| ||||| ||||||||||||||||||||||   ||||  ||||||||||||||||||||     
T  16051534 cgcacacacgttgtatg----tttaccgctttagatgtatgtttaggaaacgcgatacttagaaaaatatcaattttccaaaataagcaaattccatcac 16051629  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    |||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  16051630 ttgaaa-ttttttccaaacaaaccttggagtcaaaactccattgaattttccctttattttcttaa-tcaaactcaaatgaactctaattccaacttaga 16051727  T
Q  213 ccttttt----taataattgaaccaaccattcaccatttt 248  Q
    |||||||    |||||||||||||||| ||||||||||||    
T  16051728 cctttttttaataataattgaaccaactattcaccatttt 16051767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 63 - 254
Target Start/End: Complemental strand, 16454565 - 16454371
Alignment:
Q  63 acgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcagttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattt 161  Q
    |||||||||||||||||| ||   ||||  |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  16454565 acgcgatacttagaaaaacatcaattttccaaaataagcaaattccatcacttgaaaattctttcctaataaaccttggagtcaaaactccattgaattt 16454466  T
Q  162 tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt---taataattgaaccaaccattcaccattttcttctc 254  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  16454465 tccctttattttcttaa-tcaaactcaaatgaactctaattccaacttagaccttttttaataataattgaaccaaccattcaccattttcttctc 16454371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 14 - 248
Target Start/End: Complemental strand, 10839442 - 10839203
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt---aaaataagcaaattccatc 110  Q
    ||||||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||||| |||     ||||| || || |||||||    
T  10839442 cgcacacacgttgtatgttgatttaccgtcttagatgcatgcttagggaacgcgatacttagaaaaatattcatttcccaaaaaattagaaagttccatc 10839343  T
Q  111 agttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactta 210  Q
    | ||||||||||||||  |||||||||||||||||||| ||||||| | ||| |||||||||||||||| |||| ||||||||||| |||||||||||||    
T  10839342 acttgaaaattttttca-aataaaccttggagtcaaaactccattgcacttttcctttattttcttaagcaaaattcaaatgaactttaattccaactta 10839244  T
Q  211 gac-cttt--tttaataattgaaccaaccattcaccatttt 248  Q
    ||| ||||  |||||||||||||||||||| ||||||||||    
T  10839243 gactcttttctttaataattgaaccaaccactcaccatttt 10839203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 14 - 235
Target Start/End: Original strand, 15854149 - 15854370
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt---aaaataagcaaattccatc 110  Q
    |||||||||||||||||    |||||||||||||||||||||||||| |||||||||||||||||||| |   ||||    ||||||||||||||| |||    
T  15854149 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatgtcaattttccaaaaaataagcaaattctatc 15854244  T
Q  111 agttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactta 210  Q
    | |||||||||||| || |||||||||||||||||||| ||||||| ||||||  |||||||||||||  ||| ||||||||||||||||||||||||||    
T  15854245 acttgaaaattttt-ccgaataaaccttggagtcaaaactccattgcattttct-tttattttcttaatcaaa-ctcaaatgaactctaattccaactta 15854341  T
Q  211 gacct----tttttaataattgaaccaac 235  Q
    ||| |    ||||||||||||||||||||    
T  15854342 gacattttctttttaataattgaaccaac 15854370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 118 - 254
Target Start/End: Complemental strand, 16498566 - 16498428
Alignment:
Q  118 aattttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctt 216  Q
    |||||||||| || ||||||||||||||||| ||||||||| |||| |||||||||||||||  ||| | ||||||||  |||||||| |||||||| ||    
T  16498566 aattttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaaccaaatc-caaatgaatcctaattcctacttagacttt 16498468  T
Q  217 ttt--taataattgaaccaaccattcaccattttcttctc 254  Q
    |||  ||| |||||||||||||||||||||||||||||||    
T  16498467 tttaataacaattgaaccaaccattcaccattttcttctc 16498428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 118 - 254
Target Start/End: Complemental strand, 16507873 - 16507735
Alignment:
Q  118 aattttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctt 216  Q
    |||||||||| || ||||||||||||||||| ||||||||| |||| |||||||||||||||  ||| | ||||||||  |||||||| |||||||| ||    
T  16507873 aattttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaaccaaatc-caaatgaatcctaattcctacttagacttt 16507775  T
Q  217 ttt--taataattgaaccaaccattcaccattttcttctc 254  Q
    |||  ||| |||||||||||||||||||||||||||||||    
T  16507774 tttaataacaattgaaccaaccattcaccattttcttctc 16507735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 118 - 254
Target Start/End: Complemental strand, 16522977 - 16522839
Alignment:
Q  118 aattttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctt 216  Q
    |||||||||| || ||||||||||||||||| ||||||||| |||| |||||||||||||||  ||| | ||||||||  |||||||| |||||||| ||    
T  16522977 aattttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaaccaaatc-caaatgaatcctaattcctacttagacttt 16522879  T
Q  217 ttt--taataattgaaccaaccattcaccattttcttctc 254  Q
    |||  ||| |||||||||||||||||||||||||||||||    
T  16522878 tttaataacaattgaaccaaccattcaccattttcttctc 16522839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 120 - 254
Target Start/End: Original strand, 18627135 - 18627273
Alignment:
Q  120 ttttttcctaataaaccttggagtcaaaaatccattgaa---ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctt 216  Q
    |||||||| || ||||||||||||||||| |||||||||   |||| |||||||||||||||  ||| | ||||||||  |||||||| |||||||| ||    
T  18627135 ttttttccaaacaaaccttggagtcaaaactccattgaattttttttcctttattttcttaaccaaatc-caaatgaatcctaattcctacttagacttt 18627233  T
Q  217 ttt--taataattgaaccaaccattcaccattttcttctc 254  Q
    |||  ||| |||||||||||||||||||||||||||||||    
T  18627234 tttaataacaattgaaccaaccattcaccattttcttctc 18627273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 254
Target Start/End: Original strand, 48217295 - 48217432
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattttc---cctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttt 217  Q
    ||||||| || ||||||||||||||||| |||||||||||||    |||||||||||||||  ||| | ||||||||  |||||||| |||||||| |||    
T  48217295 tttttccaaacaaaccttggagtcaaaactccattgaattttttttcctttattttcttaatcaaatc-caaatgaatcctaattcctacttagactttt 48217393  T
Q  218 tt--taataattgaaccaaccattcaccattttcttctc 254  Q
    ||  ||| |||||||||||||||||||||||||||||||    
T  48217394 ttaataacaattgaaccaaccattcaccattttcttctc 48217432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 120 - 254
Target Start/End: Original strand, 4186455 - 4186592
Alignment:
Q  120 ttttttcctaataaaccttggagtcaaaaatccattgaat-tttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt 218  Q
    |||||||| || ||||||||||||||||| |||||||||| ||| |||||||||||||||  ||| | ||||||||  |||||||| ||||| || ||||    
T  4186455 ttttttccaaacaaaccttggagtcaaaactccattgaatcttttcctttattttcttaaccaaatc-caaatgaatcctaattcctacttaaacttttt 4186553  T
Q  219 tta---ataattgaaccaaccattcaccattttcttctc 254  Q
    | |   |||||||||||||||||||||||||||||||||    
T  4186554 taataaataattgaaccaaccattcaccattttcttctc 4186592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 4055413 - 4055538
Alignment:
Q  92 aaaataagcaaattccatcagttgaaaattttttcctaataaaccttggagtcaaaaatccattga-attttccctttattttcttaagaaaaactcaaa 190  Q
    |||||||||||||||||||| ||||||| ||||||| || |||| |||||||||||| ||||||||  ||||||||||||||||||||   |||||||||    
T  4055413 aaaataagcaaattccatcacttgaaaa-tttttccaaacaaactttggagtcaaaactccattgattttttccctttattttcttaa-tcaaactcaaa 4055510  T
Q  191 tgaactctaattccaacttagacctttt 218  Q
    |||||||||| | | |||||||| ||||    
T  4055511 tgaactctaacttctacttagacatttt 4055538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 248
Target Start/End: Complemental strand, 10921418 - 10921289
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| ||||||||||||||| | |||  ||||||||  |||||||| |||||||| |||||    
T  10921418 tttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaa-acaaatccaaatgaatcctaattcctacttagactttttt 10921320  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||||||||||    
T  10921319 aataacaattgaaccaaccattcaccatttt 10921289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 121 - 248
Target Start/End: Complemental strand, 36879103 - 36878973
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| |||||||| ||| | |||||||||||||||  ||| | | ||||||  |||||||| ||||||||||||||    
T  36879103 tttttccaaacaaaccttggagtcaaaactccattgattttcttcctttattttcttaaacaaatc-cgaatgaatcctaattcctacttagaccttttt 36879005  T
Q  220 taataa---ttgaaccaaccattcaccatttt 248  Q
    ||||||   |||||||||||||||||||||||    
T  36879004 taataacaattgaaccaaccattcaccatttt 36878973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 248
Target Start/End: Original strand, 10851862 - 10852092
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttttaaaataagcaaattccatcagt 113  Q
    |||||||||||||||||    |||||||||| ||||| ||||||||| ||||| ||||||||||||||||   |||||  || ||   || ||||| | |    
T  10851862 cgcacacacgttgtatg----tttaccgctt-agatgcatgcttaggaaacgcaatacttagaaaaatatcattttttccaaaaat--aactccataact 10851954  T
Q  114 tgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac 213  Q
      |||||||||  |||||||||||||||||||| | ||||||| |||||||||||||||||||||  ||||||  ||||||   ||||| | ||||||||    
T  10851955 c-aaaatttttctctaataaaccttggagtcaacactccattgtattttccctttattttcttaatcaaaacttcaatgaatcttaatttctacttagac 10852053  T
Q  214 ---cttt-tttaataattgaaccaaccattcaccatttt 248  Q
       |||| ||||||||| ||||||||||||||| |||||    
T  10852054 actctttctttaataatcgaaccaaccattcactatttt 10852092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 254
Target Start/End: Complemental strand, 15353316 - 15353177
Alignment:
Q  120 ttttttcctaataaaccttggagtcaaaaatccattgaattttc----cctttattttcttaagaaaaactcaaatgaactctaattccaacttagacct 215  Q
    |||||||| || ||||||||||||||||| |||||||| ||||     |||||||||||||||  ||| | ||||||||  |||||||| |||||||| |    
T  15353316 ttttttccaaacaaaccttggagtcaaaactccattgattttttttttcctttattttcttaaccaaatc-caaatgaatcctaattcctacttagactt 15353218  T
Q  216 tttt--taataattgaaccaaccattcaccattttcttctc 254  Q
    ||||  ||| |||||||||||||||||||||||||||||||    
T  15353217 ttttaataacaattgaaccaaccattcaccattttcttctc 15353177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 248
Target Start/End: Complemental strand, 13736111 - 13735982
Alignment:
Q  123 tttcctaataaaccttggagtcaaaaatccattgaattttc--cctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttttt 220  Q
    ||||| || ||||||||||||||||| |||||||| ||||   |||||||||||||||  ||| | ||||||||  |||||||| |||||||||||||||    
T  13736111 tttccaaacaaaccttggagtcaaaactccattgattttttttcctttattttcttaaacaaatc-caaatgaatcctaattcctacttagacctttttt 13736013  T
Q  221 aat---aattgaaccaaccattcaccatttt 248  Q
    |||   |||||||||||||||||||| ||||    
T  13736012 aataacaattgaaccaaccattcaccctttt 13735982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 251
Target Start/End: Complemental strand, 15004689 - 15004550
Alignment:
Q  117 aaattttttc-ctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac-- 213  Q
    |||||||||| |||||||||||||||||||| | ||||||| |||||||||||||||||||||  ||||||  ||||||   ||||| | ||||||||      
T  15004689 aaattttttctctaataaaccttggagtcaacactccattgtattttccctttattttcttaatcaaaacttcaatgaatcttaatttctacttagacac 15004590  T
Q  214 -cttt-tttaataattgaaccaaccattcaccattttctt 251  Q
     |||| ||||||||| ||||||||||||||| ||| ||||    
T  15004589 tctttctttaataatcgaaccaaccattcactattgtctt 15004550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 248
Target Start/End: Complemental strand, 11414342 - 11414210
Alignment:
Q  120 ttttttcctaataaaccttggagtcaaaaatccattgaa---ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctt 216  Q
    |||||||| || ||||||||||||||||| |||||||||   |||| ||||||||||||||| | |||  ||||||||  |||||||| |||||||| ||    
T  11414342 ttttttccaaacaaaccttggagtcaaaactccattgaaacttttttcctttattttcttaa-acaaatccaaatgaatcctaattcctacttagacttt 11414244  T
Q  217 tttt--aataattgaaccaaccattcaccatttt 248  Q
    ||||  || ||||||||||||||||||| |||||    
T  11414243 tttttaaacaattgaaccaaccattcactatttt 11414210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 254
Target Start/End: Original strand, 2150162 - 2150297
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| ||||||||||||||| | |||  ||||||||  |||||||| ||||||| ||||||    
T  2150162 tttttccgaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaa-acaaatccaaatgaatcctaattcctacttaga-cttttt 2150259  T
Q  220 taat----aattgaaccaaccattcaccattttcttctc 254  Q
    ||||    ||||||||||| |||||||||||| ||||||    
T  2150260 taataaacaattgaaccaa-cattcaccatttccttctc 2150297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 254
Target Start/End: Original strand, 2165373 - 2165508
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| ||||||||||||||| | |||  ||||||||  |||||||| ||||||| ||||||    
T  2165373 tttttccgaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaa-acaaatccaaatgaatcctaattcctacttaga-cttttt 2165470  T
Q  220 taat----aattgaaccaaccattcaccattttcttctc 254  Q
    ||||    ||||||||||| |||||||||||| ||||||    
T  2165471 taataaacaattgaaccaa-cattcaccatttccttctc 2165508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 5246383 - 5246511
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt- 218  Q
    ||||||| || ||||||||||||||||| |||||||||||| | | ||||||||||||| | |||  ||||||||  |||||| | |||||||| ||||     
T  5246383 tttttccaaacaaaccttggagtcaaaactccattgaatttcttcttttattttcttaa-acaaatccaaatgaatcctaatttctacttagacttttta 5246481  T
Q  219 ttaataattgaaccaaccattcaccatttt 248  Q
     ||| |||||||||||||||||||||||||    
T  5246482 ataacaattgaaccaaccattcaccatttt 5246511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 242
Target Start/End: Complemental strand, 13895338 - 13895113
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttttaaaataagcaaattccatcagt 113  Q
    |||||||||||||||||    |||||||||| ||||| ||||||||| ||||| ||||||||||||||||   |||||  || ||  || | |||| | |    
T  13895338 cgcacacacgttgtatg----tttaccgctt-agatgcatgcttaggaaacgcaatacttagaaaaatatctttttttccaaaaaataact-ccataact 13895245  T
Q  114 tgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac 213  Q
      |||||||||  |||||||||||||||||||| | ||||||| ||||||||||||||||||||   ||||||  ||||||   ||||| | ||||||||    
T  13895244 c-aaaatttttctctaataaaccttggagtcaacactccattgtattttccctttattttcttactcaaaacttcaatgaatcttaatttctacttagac 13895146  T
Q  214 ---cttt-tttaataattgaaccaaccattcac 242  Q
       |||| ||||||||| |||||||||||||||    
T  13895145 actctttctttaataatcgaaccaaccattcac 13895113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 248
Target Start/End: Complemental strand, 11429325 - 11429193
Alignment:
Q  120 ttttttcctaataaaccttggagtcaaaaatccattgaa---ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctt 216  Q
    |||||||| || ||||||||||||||||| |||||||||   |||| ||||||||||||||| | |||  ||||||||  |||||||| |||||||| ||    
T  11429325 ttttttccaaacaaaccttggagtcaaaactccattgaaacttttttcctttattttcttaa-acaaatccaaatgaatcctaattcctacttagacttt 11429227  T
Q  217 tttt--aataattgaaccaaccattcaccatttt 248  Q
    ||||  || ||| ||||||||||||||| |||||    
T  11429226 tttttaaacaatcgaaccaaccattcactatttt 11429193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 254
Target Start/End: Original strand, 2969037 - 2969173
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| | ||||||||||||| | |||  ||||||||  ||||| || |||||||| |||||    
T  2969037 tttttccaaacaaaccttggagtcaaaactccattgaattttttcttttattttcttaa-acaaatccaaatgaatcctaatccctacttagactttttt 2969135  T
Q  220 taat----aattgaaccaaccattcaccattttcttctc 254  Q
    ||||    ||||||||||| |||||||||||| ||||||    
T  2969136 taataaacaattgaaccaa-cattcaccatttccttctc 2969173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 20592846 - 20592969
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt- 219  Q
    ||||||| || ||||||||||||||||| |||||||||||     |||  |||||||| | |||  ||||||||  |||||| | |||||||| |||||     
T  20592846 tttttccaaacaaaccttggagtcaaaactccattgaatt-----ttttctttcttaa-acaaatccaaatgaatcctaatttctacttagactttttta 20592939  T
Q  220 -taataattgaaccaaccattcaccatttt 248  Q
     ||| |||||||||||||||||||||||||    
T  20592940 ataacaattgaaccaaccattcaccatttt 20592969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 254
Target Start/End: Original strand, 11361400 - 11361536
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa--ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac-cttt 217  Q
    ||||||| || ||||||||||||||| | |||||||||  ||||  |||||||||||||| | |||  ||||||||  |||||||| |||||||| ||||    
T  11361400 tttttccaaacaaaccttggagtcaagactccattgaattttttttctttattttcttaa-acaaatccaaatgaatcctaattcctacttagactcttt 11361498  T
Q  218 t--ttaataattgaaccaaccattcaccattttcttctc 254  Q
    |  | || ||||||||||| |||||||||||| ||||||    
T  11361499 taataaacaattgaaccaa-cattcaccatttccttctc 11361536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 15004785 - 15004721
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatat 83  Q
    |||||||||||||||||    |||||||||| ||||| ||||||||| ||||| ||||||||||||||||    
T  15004785 cgcacacacgttgtatg----tttaccgctt-agatgcatgcttaggaaacgcaatacttagaaaaatat 15004721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 200; Significance: 1e-109; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 14 - 254
Target Start/End: Complemental strand, 28898446 - 28898205
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttta--aaataagcaaattccatca 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   |||||||||||||||||||    
T  28898446 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattctttttttttaaataagcaaattccatca 28898347  T
Q  112 gttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttag 211  Q
     |||||| ||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28898346 cttgaaatttttttcctaataaaccttggagtcaagactccattgaattt-ccctttattttcttaagaaaaactcaaatgaactctaattccaacttag 28898248  T
Q  212 accttttttaataattgaaccaaccattcaccattttcttctc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  28898247 accttttttaataattgaaccaaccattcaccattttcttctc 28898205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 14 - 254
Target Start/End: Complemental strand, 28934841 - 28934600
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttta--aaataagcaaattccatca 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   |||||||||||||||||||    
T  28934841 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattctttttttttaaataagcaaattccatca 28934742  T
Q  112 gttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttag 211  Q
     |||||| ||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28934741 cttgaaatttttttcctaataaaccttggagtcaagactccattgaattt-ccctttattttcttaagaaaaactcaaatgaactctaattccaacttag 28934643  T
Q  212 accttttttaataattgaaccaaccattcaccattttcttctc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  28934642 accttttttaataattgaaccaaccattcaccattttcttctc 28934600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 14 - 254
Target Start/End: Original strand, 22898991 - 22899230
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcag 112  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||| ||||||||||||||||||   ||||  |||||||| |||||||||||     
T  22898991 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaaacacgatacttagaaaaatatcaattttccaaaataagtaaattccatcac 22899086  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  22899087 ttgaaatttttttcctaataaaccttggagtcaaaactccattgaattttccctttattttcttaa-tcaaactcaaatgaactctaattccaacttaga 22899185  T
Q  213 cctttt---ttaataattgaaccaaccattcaccattttcttctc 254  Q
    || |||    |||||||||||||||||||||||||||||||||||    
T  22899186 ccctttctaataataattgaaccaaccattcaccattttcttctc 22899230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 14 - 254
Target Start/End: Complemental strand, 30465794 - 30465555
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcag 112  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||||||||||||||||||||||   ||||  ||||||||||||||||||||     
T  30465794 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatatcaattttccaaaataagcaaattccatcac 30465699  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    |||||||   ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  30465698 ttgaaaaaaatttccaaataaaccttggagtcaaaactccattgaattttccctttattttcttaa-tcaaactcaaatgaactctaattccaacttaga 30465600  T
Q  213 ccttttt---taataattgaaccaaccattcaccattttcttctc 254  Q
    |||||||   ||||||||||||||||| ||||||||||| |||||    
T  30465599 ccttttttaataataattgaaccaacctttcaccatttttttctc 30465555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 24612323 - 24612085
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt----aaaataagcaaattccat 109  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||||||||||||||||||||||   ||||     |||||| | |||||||||    
T  24612323 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatatcaattttccaaaaaaataggtaaattccat 24612228  T
Q  110 cagttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactt 209  Q
    || |||||| |||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||   ||||||||||||||||||||||||||||    
T  24612227 cacttgaaatttttttccaaatagaccttggagtcaaaactccattgaaatttccctttattttcttaa-tcaaactcaaatgaactctaattccaactt 24612129  T
Q  210 agaccttttt---taataattgaaccaaccattcaccattttct 250  Q
    ||||||||||   ||||||||||||||| |||||||||||||||    
T  24612128 agaccttttttaataataattgaaccaatcattcaccattttct 24612085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 24671949 - 24671711
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt----aaaataagcaaattccat 109  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||||||||||||||||||||||   ||||     |||||| | |||||||||    
T  24671949 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatatcaattttccaaaaaaataggtaaattccat 24671854  T
Q  110 cagttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactt 209  Q
    || |||||| |||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||   ||||||||||||||||||||||||||||    
T  24671853 cacttgaaatttttttccaaatagaccttggagtcaaaactccattgaaatttccctttattttcttaa-tcaaactcaaatgaactctaattccaactt 24671755  T
Q  210 agaccttttt---taataattgaaccaaccattcaccattttct 250  Q
    ||||||||||   ||||||||||||||| |||||||||||||||    
T  24671754 agaccttttttaataataattgaaccaatcattcaccattttct 24671711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 24708725 - 24708487
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt----aaaataagcaaattccat 109  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||||||||||||||||||||||   ||||     |||||| | |||||||||    
T  24708725 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatatcaattttccaaaaaaataggtaaattccat 24708630  T
Q  110 cagttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactt 209  Q
    || |||||| |||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||   ||||||||||||||||||||||||||||    
T  24708629 cacttgaaatttttttccaaatagaccttggagtcaaaactccattgaaatttccctttattttcttaa-tcaaactcaaatgaactctaattccaactt 24708531  T
Q  210 agaccttttt---taataattgaaccaaccattcaccattttct 250  Q
    ||||||||||   ||||||||||||||| |||||||||||||||    
T  24708530 agaccttttttaataataattgaaccaatcattcaccattttct 24708487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 24741719 - 24741481
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt----aaaataagcaaattccat 109  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||||||||||||||||||||||   ||||     |||||| | |||||||||    
T  24741719 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatatcaattttccaaaaaaataggtaaattccat 24741624  T
Q  110 cagttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactt 209  Q
    || |||||| |||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||   ||||||||||||||||||||||||||||    
T  24741623 cacttgaaatttttttccaaatagaccttggagtcaaaactccattgaaatttccctttattttcttaa-tcaaactcaaatgaactctaattccaactt 24741525  T
Q  210 agaccttttt---taataattgaaccaaccattcaccattttct 250  Q
    ||||||||||   ||||||||||||||| |||||||||||||||    
T  24741524 agaccttttttaataataattgaaccaatcattcaccattttct 24741481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 24754488 - 24754250
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt----aaaataagcaaattccat 109  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||||||||||||||||||||||   ||||     |||||| | |||||||||    
T  24754488 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatatcaattttccaaaaaaataggtaaattccat 24754393  T
Q  110 cagttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactt 209  Q
    || |||||| |||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||   ||||||||||||||||||||||||||||    
T  24754392 cacttgaaatttttttccaaatagaccttggagtcaaaactccattgaaatttccctttattttcttaa-tcaaactcaaatgaactctaattccaactt 24754294  T
Q  210 agaccttttt---taataattgaaccaaccattcaccattttct 250  Q
    ||||||||||   ||||||||||||||| |||||||||||||||    
T  24754293 agaccttttttaataataattgaaccaatcattcaccattttct 24754250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 235
Target Start/End: Complemental strand, 22268924 - 22268701
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-----aaaataagcaaattcca 108  Q
    |||||||||||||||||    |||||||||||||||||||||||||| |||||||||||||||||||| |   ||||      |||||||||||||||||    
T  22268924 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatgtcaattttccaaaaaaaataagcaaattcca 22268829  T
Q  109 tcagttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaact 208  Q
    ||| |||||||||||| || |||||||||||||||||||| ||||||| || |||  |||||||||||||  ||| ||||||||||||||||||||||||    
T  22268828 tcacttgaaaattttt-ccaaataaaccttggagtcaaaactccattgcatcttct-tttattttcttaatcaaa-ctcaaatgaactctaattccaact 22268732  T
Q  209 tagacct----tttttaataattgaaccaac 235  Q
    ||||| |    ||||||||||||||||||||    
T  22268731 tagacattttctttttaataattgaaccaac 22268701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 35 - 254
Target Start/End: Complemental strand, 20580173 - 20579948
Alignment:
Q  35 tttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-----aaaataagcaaattccatcagttgaaaattttttccta 129  Q
    ||||||| |||||||||||| ||||| || ||||| |||||||||||   | |||||     |||||||||||||||||||| |||||| |||||||| |    
T  20580173 tttaccgttttagatgtatgtttaggaaatgcgatccttagaaaaatgc-catttttccaaaaaaataagcaaattccatcacttgaaa-ttttttccaa 20580076  T
Q  130 ataaaccttggagtcaaaaatccattgaa---ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt-ttaataa 225  Q
    ||||||||||||||||||| |||||||||   |||| |||||||||||||||  ||| | |||||||| |||||||||||||||||| ||||  ||| ||    
T  20580075 ataaaccttggagtcaaaactccattgaattttttttcctttattttcttaatcaaatc-caaatgaattctaattccaacttagactttttaataacaa 20579977  T
Q  226 ttgaaccaaccattcaccattttcttctc 254  Q
    |||||||||||||||||||||||||||||    
T  20579976 ttgaaccaaccattcaccattttcttctc 20579948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 235
Target Start/End: Original strand, 25210953 - 25211176
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt----aaaataagcaaattccat 109  Q
    ||||||||||||||||| |    |||||||||||||||||||||||| ||||||||||||||||||||||   ||||     |||| |||||||||||||    
T  25210953 cgcacacacgttgtatgct----taccgctttagatgtatgcttaggaaacgcgatacttagaaaaatatcaattttccacaaaaacaagcaaattccat 25211048  T
Q  110 cagttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactt 209  Q
    || |||||||||||| || |||||||||||||||||||| ||||||||| |||| ||||  ||||||||  |||||   || ||||||||| | | ||||    
T  25211049 cacttgaaaattttt-ccaaataaaccttggagtcaaaactccattgaactttctctttgctttcttaatcaaaacctcaacgaactctaacttctactt 25211147  T
Q  210 agacct---tttttaataattgaaccaac 235  Q
    |||| |   ||||||||||||||||||||    
T  25211148 agacatttctttttaataattgaaccaac 25211176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 235
Target Start/End: Original strand, 25275105 - 25275328
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt----aaaataagcaaattccat 109  Q
    ||||||||||||||||| |    |||||||||||||||||||||||| ||||||||||||||||||||||   ||||     |||| |||||||||||||    
T  25275105 cgcacacacgttgtatgct----taccgctttagatgtatgcttaggaaacgcgatacttagaaaaatatcaattttccacaaaaacaagcaaattccat 25275200  T
Q  110 cagttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactt 209  Q
    || |||||||||||| || |||||||||||||||||||| ||||||||| |||| ||||  ||||||||  |||||   || ||||||||| | | ||||    
T  25275201 cacttgaaaattttt-ccaaataaaccttggagtcaaaactccattgaactttctctttgctttcttaatcaaaacctcaacgaactctaacttctactt 25275299  T
Q  210 agacct---tttttaataattgaaccaac 235  Q
    |||| |   ||||||||||||||||||||    
T  25275300 agacatttctttttaataattgaaccaac 25275328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 178
Target Start/End: Original strand, 25195591 - 25195754
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttt----taaaataagcaaattccat 109  Q
    |||||||||||||||||     ||||||||||||||||||||||||| ||||||||||||||||||||||   ||||     |||| |||||||||||||    
T  25195591 cgcacacacgttgtatg----cttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatatcaattttccacaaaaacaagcaaattccat 25195686  T
Q  110 cagttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaa 178  Q
     | ||||||| ||||||| |||||||||||||||||||| ||||||||| |||| ||||  ||||||||    
T  25195687 tacttgaaaa-tttttccaaataaaccttggagtcaaaactccattgaactttctctttgctttcttaa 25195754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 254
Target Start/End: Original strand, 24947703 - 24947839
Alignment:
Q  120 ttttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt 218  Q
    |||||||| || ||||||||||||||||| ||||||||| |||| |||||||||||||||  ||| | ||||||||  |||||||| |||||||| ||||    
T  24947703 ttttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaaccaaatc-caaatgaatcctaattcctacttagacttttt 24947801  T
Q  219 t--taataattgaaccaaccattcaccattttcttctc 254  Q
    |  ||| |||||||||||||||||||||||||||||||    
T  24947802 taataacaattgaaccaaccattcaccattttcttctc 24947839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 254
Target Start/End: Original strand, 24980568 - 24980704
Alignment:
Q  120 ttttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt 218  Q
    |||||||| || ||||||||||||||||| ||||||||| |||| |||||||||||||||  ||| | ||||||||  |||||||| |||||||| ||||    
T  24980568 ttttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaaccaaatc-caaatgaatcctaattcctacttagacttttt 24980666  T
Q  219 t--taataattgaaccaaccattcaccattttcttctc 254  Q
    |  ||| |||||||||||||||||||||||||||||||    
T  24980667 taataacaattgaaccaaccattcaccattttcttctc 24980704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 120 - 248
Target Start/End: Complemental strand, 20193617 - 20193486
Alignment:
Q  120 ttttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt 218  Q
    |||||||| || ||||||||||||||||| ||||||||| |||| ||||||||||||||| | |||  |||||||   |||||||| |||||||||||||    
T  20193617 ttttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaa-acaaatccaaatgactcctaattcctacttagacctttt 20193519  T
Q  219 ttaat---aattgaaccaaccattcaccatttt 248  Q
    |||||   |||||||||||||||||||||||||    
T  20193518 ttaataacaattgaaccaaccattcaccatttt 20193486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 175
Target Start/End: Complemental strand, 27285719 - 27285577
Alignment:
Q  37 taccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt----aaaataagcaaattccatcagttgaaaattttttcctaata 132  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||   ||||     |||| ||||||||||||||| ||||||||| || || ||||    
T  27285719 taccgctttagatgtatgcttaggaaacgcgacacttagaaaaatatcaattttccataaaaacaagcaaattccatcacttgaaaattatt-ccaaata 27285621  T
Q  133 aaccttggagtcaaaaatccattgaa-ttttccctttattttct 175  Q
    |||| ||||||||||| ||||||||| ||||| |||||||||||    
T  27285620 aaccatggagtcaaaactccattgaatttttctctttattttct 27285577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 254
Target Start/End: Original strand, 23887810 - 23887945
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattttc-cctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || || |||||||||||||| |||||||||||||  |||||||||||||||  ||| | ||||||||  |||||||| |||||||| |||||    
T  23887810 tttttccaaacaagccttggagtcaaaactccattgaattttttcctttattttcttaatcaaatc-caaatgaatcctaattcctacttagactttttt 23887908  T
Q  220 --taataattgaaccaaccattcaccattttcttctc 254  Q
      ||| |||||||||||||||||||||||||||||||    
T  23887909 aataacaattgaaccaaccattcaccattttcttctc 23887945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 120 - 254
Target Start/End: Original strand, 7816238 - 7816379
Alignment:
Q  120 ttttttcctaataaaccttggagtcaaaaatccattgaa--ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttt 217  Q
    |||||||| || ||||||||||||||||| |||||||||  |||| |||||||||||||||  ||| | ||||||||  |||||||| |||||||| |||    
T  7816238 ttttttccaaacaaaccttggagtcaaaactccattgaatttttttcctttattttcttaaccaaatc-caaatgaatcctaattcctacttagactttt 7816336  T
Q  218 tttaat------aattgaaccaaccattcaccattttcttctc 254  Q
    ||||||      |||||||||||||||||||||||||||||||    
T  7816337 tttaataataacaattgaaccaaccattcaccattttcttctc 7816379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 123 - 254
Target Start/End: Complemental strand, 24692727 - 24692594
Alignment:
Q  123 tttcctaataaaccttggagtcaaaaatccattgaattttc-cctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt-- 219  Q
    ||||| || ||||||||||||||||| |||||||||||||  |||||||||||||||  ||| | ||||||||  ||||| || |||||||| |||||      
T  24692727 tttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaaacaaatc-caaatgaatcctaatccctacttagacttttttaa 24692629  T
Q  220 taataattgaaccaaccattcaccattttcttctc 254  Q
    ||| |||||||||||||||||||||||||||||||    
T  24692628 taacaattgaaccaaccattcaccattttcttctc 24692594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 254
Target Start/End: Original strand, 23902453 - 23902588
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattttc-cctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || || ||||||||| |||| |||||||||||||  |||||||||||||||  ||| | ||||||||  |||||||| |||||||| |||||    
T  23902453 tttttccaaacaagccttggagtnaaaactccattgaattttttcctttattttcttaatcaaatc-caaatgaatcctaattcctacttagactttttt 23902551  T
Q  220 --taataattgaaccaaccattcaccattttcttctc 254  Q
      ||| |||||||||||||||||||||||||||||||    
T  23902552 aataacaattgaaccaaccattcaccattttcttctc 23902588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 3944040 - 3944168
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt- 219  Q
    ||||||| || ||||||||||||||||| |||||||| ||||  |||||||||||||| | |||  ||||||||  ||||| || |||||||| |||||     
T  3944040 tttttccaaacaaaccttggagtcaaaactccattgacttttttctttattttcttaa-acaaatccaaatgaatcctaatccctacttagactttttta 3944138  T
Q  220 -taataattgaaccaaccattcaccatttt 248  Q
     ||| |||||||||||||||||||||||||    
T  3944139 ataacaattgaaccaaccattcaccatttt 3944168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 242
Target Start/End: Original strand, 21501238 - 21501461
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttttaaaat-aagcaaattccatcag 112  Q
    |||||||||||||||||    ||||||| |||||||||||| |||||  ||||||||||||||||| | ||| ||||| |||  ||   ||||||||||     
T  21501238 cgcacacacgttgtatg----tttaccgttttagatgtatgtttaggagacgcgatacttagaaaa-tgttcatttttcaaagcaaattaattccatcac 21501332  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    |  ||   | |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||   ||| |||||||||   ||||| | |||||||    
T  21501333 tcaaa---tctttcctaataaaccttggagtcaaaactccattgtatttt-cctttattttcttaa-tcaaattcaaatgaatcttaatttctacttaga 21501427  T
Q  213 cctttt----ttaataattgaaccaaccattcac 242  Q
    | ||||    ||||||||||||||||| ||||||    
T  21501428 cattttttcgttaataattgaaccaacaattcac 21501461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 244
Target Start/End: Original strand, 22347723 - 22347852
Alignment:
Q  117 aaattttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacct 215  Q
    ||||||||| | || ||||||||||||||||| ||||||||| |||| | ||||||||||||| | |||  |||||||   |||||||| |||||||| |    
T  22347723 aaatttttttcaaacaaaccttggagtcaaaactccattgaattttttcttttattttcttaa-acaaatccaaatgactcctaattcctacttagactt 22347821  T
Q  216 tttt--taataattgaaccaaccattcacca 244  Q
    ||||  ||| |||||||||||||||||||||    
T  22347822 ttttaataacaattgaaccaaccattcacca 22347852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 178
Target Start/End: Complemental strand, 19863906 - 19863750
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttttaaaat-aagcaaattccatcag 112  Q
    |||||||||||||||||    ||||||| |||||||||||| |||||  ||| ||||||||||||| ||||| ||||| |||  ||   ||||||||||     
T  19863906 cgcacacacgttgtatg----tttaccgttttagatgtatgtttaggagacgtgatacttagaaaa-tattcatttttcaaagcaaattaattccatcac 19863812  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaa 178  Q
    |  ||   | |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  19863811 tcaaa---tctttcctaataaaccttggagtcaaaactccattgtatttt-cctttattttcttaa 19863750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 242
Target Start/End: Complemental strand, 37294744 - 37294623
Alignment:
Q  123 tttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt---- 218  Q
    |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||  ||| | ||||||||   ||||| | |||||||| ||||        
T  37294744 tttcctaataaaccttggagtcaaaactccattgta-tttccctttattttcttaatcaaatc-caaatgaatcttaatttctacttagacatttttccg 37294647  T
Q  219 ttaataattgaaccaaccattcac 242  Q
    ||||||||||||||||| ||||||    
T  37294646 ttaataattgaaccaacaattcac 37294623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 248
Target Start/End: Complemental strand, 18061550 - 18061420
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa--ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt 218  Q
    ||||||| || ||||||||||||||||| |||||||||  |||| | ||||||||||||| | |||  |||||||   |||||||| |||||||| ||||    
T  18061550 tttttccaaacaaaccttggagtcaaaactccattgaatttttttcttttattttcttaa-acaaatccaaatgactcctaattcctacttagacttttt 18061452  T
Q  219 t--taataattgaaccaaccattcaccatttt 248  Q
    |  ||| |||||||||||||||||||| ||||    
T  18061451 taataacaattgaaccaaccattcaccttttt 18061420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 22445799 - 22445929
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| || | | ||||||||||||| | |||  ||||||||  |||||| | |||||||| |||||    
T  22445799 tttttccaaacaaaccttggagtcaaaactccattgaagttcttcttttattttcttaa-acaaatccaaatgaatcctaatttctacttagactttttt 22445897  T
Q  220 ---taataattgaaccaaccattcaccatttt 248  Q
       ||| |||||||||||||||||||||||||    
T  22445898 tgataacaattgaaccaaccattcaccatttt 22445929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 32449418 - 32449304
Alignment:
Q  136 cttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt--taataattgaacc 232  Q
    ||||||||||||| |||||||||||| | | |||||||||||||  ||| | ||||||||  |||||| | |||||||| |||||  ||| |||||||||    
T  32449418 cttggagtcaaaactccattgaatttcttcttttattttcttaaacaaatc-caaatgaatcctaatttctacttagacttttttaataacaattgaacc 32449320  T
Q  233 aaccattcaccatttt 248  Q
    ||||||||||||||||    
T  32449319 aaccattcaccatttt 32449304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 156
Target Start/End: Original strand, 11559926 - 11560068
Alignment:
Q  15 gcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-------aaaataagcaaattcc 107  Q
    ||||||||||||||||    ||||||| |||||||||||||||||| |||||| ||||||||||||   ||| ||||       ||||  ||||||||||    
T  11559926 gcacacacgttgtatg----tttaccg-tttagatgtatgcttaggaaacgcgctacttagaaaaaatatccattttctcaaaaaaaaatagcaaattcc 11560020  T
Q  108 atcagttgaaaattttttcctaataaaccttggagtcaaaaatccattg 156  Q
    |||| ||||||| || |||  |||||||||||||||||||| |||||||    
T  11560021 atcacttgaaaa-ttcttctcaataaaccttggagtcaaaactccattg 11560068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 156
Target Start/End: Original strand, 11545867 - 11546010
Alignment:
Q  15 gcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt--------aaaataagcaaattc 106  Q
    ||||||||||||||||    ||||||| |||||||||||||||||| |||||| ||||||||||||   ||| ||||        ||||  |||||||||    
T  11545867 gcacacacgttgtatg----tttaccg-tttagatgtatgcttaggaaacgcgctacttagaaaaaatatccattttctcaaaaaaaaaatagcaaattc 11545961  T
Q  107 catcagttgaaaattttttcctaataaaccttggagtcaaaaatccattg 156  Q
    ||||| ||||||| || |||  |||||||||||||||||||| |||||||    
T  11545962 catcacttgaaaa-ttcttctcaataaaccttggagtcaaaactccattg 11546010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 30930229 - 30930362
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || |||| |||||||||||| |||||||||||| | | ||||||||||||| | |||  ||||||||  |||||| | |||||||| |||||    
T  30930229 tttttccaaacaaacgttggagtcaaaactccattgaatttcttcttttattttcttaa-acaaatccaaatgaatcctaatttctacttagactttttt 30930327  T
Q  220 ------taataattgaaccaaccattcaccatttt 248  Q
          ||| |||||||||||||||||||||||||    
T  30930328 ttttaataacaattgaaccaaccattcaccatttt 30930362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 37750718 - 37750772
Alignment:
Q  129 aataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaa 183  Q
    ||||||| |||||||||||| ||| ||||  ||||| ||||||||||||||||||    
T  37750718 aataaactttggagtcaaaactcctttgatgtttccttttattttcttaagaaaa 37750772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 37765963 - 37766017
Alignment:
Q  129 aataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaa 183  Q
    ||||||| |||||||||||| ||| ||||  ||||| ||||||||||||||||||    
T  37765963 aataaactttggagtcaaaactcctttgatgtttccttttattttcttaagaaaa 37766017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 30957111 - 30957151
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattt 161  Q
    ||||||| || ||||||||||||||||| ||||||||||||    
T  30957111 tttttccaaacaaaccttggagtcaaaactccattgaattt 30957151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 14 - 254
Target Start/End: Complemental strand, 16663284 - 16663043
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttta--aaataagcaaattccatca 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   |||||||||||||||||||    
T  16663284 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattctttttttttaaataagcaaattccatca 16663185  T
Q  112 gttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttag 211  Q
     |||||| ||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16663184 cttgaaatttttttcctaataaaccttggagtcaagactccattgaattt-ccctttattttcttaagaaaaactcaaatgaactctaattccaacttag 16663086  T
Q  212 accttttttaataattgaaccaaccattcaccattttcttctc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  16663085 accttttttaataattgaaccaaccattcaccattttcttctc 16663043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 14 - 254
Target Start/End: Complemental strand, 31447673 - 31447427
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt--aaaataagcaaattccatca 111  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||   ||  ||||  ||||||||||||||||||||    
T  31447673 cgcacacacgttgtatgttgatttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaaatatcaattttccaaaataagcaaattccatca 31447574  T
Q  112 gttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaaga-aaaactcaaatgaactctaattccaactta 210  Q
     ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31447573 cttgaaaattttttcctaataaactttggagtcaaaactccattgaattttccctttattttcttaagaaaaaactcaaatgaactctaattccaactta 31447474  T
Q  211 gaccttttt---taataattgaaccaaccattcaccattttcttctc 254  Q
    |||||||||   |||||||||||||||||||||||| ||||||||||    
T  31447473 gaccttttttaataataattgaaccaaccattcacctttttcttctc 31447427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 14 - 254
Target Start/End: Complemental strand, 20362327 - 20362087
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaa-tattccttttt--aaaataagcaaattccatc 110  Q
    |||||||||||||||||    |||||||||||||||||||| ||||||||| | | ||||||||||| ||||| ||||   |||| ||||||||||||||    
T  20362327 cgcacacacgttgtatg----tttaccgctttagatgtatgtttagggaacaccaaacttagaaaaaatattcattttccaaaaacaagcaaattccatc 20362232  T
Q  111 agttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactta 210  Q
    | |||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20362231 acttgaaaattttt-cctaataaaccttggagtcaaaactctattgaattttccctttattttcttaagaaaaactcaaatgaactttaattccaactta 20362133  T
Q  211 gacc--ttttttaataattgaaccaaccattcaccattttcttctc 254  Q
    ||||  ||||||||||||||||||||||||||||||||||||||||    
T  20362132 gaccctttttttaataattgaaccaaccattcaccattttcttctc 20362087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 14 - 254
Target Start/End: Original strand, 20548584 - 20548824
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaa-tattccttttt--aaaataagcaaattccatc 110  Q
    |||||||||||||||||    |||||||||||||||||||| ||||||||| | | ||||||||||| ||||| ||||   |||| ||||||||||||||    
T  20548584 cgcacacacgttgtatg----tttaccgctttagatgtatgtttagggaacaccaaacttagaaaaaatattcattttccaaaaacaagcaaattccatc 20548679  T
Q  111 agttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactta 210  Q
    | ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20548680 acttgaaaatttt-tcctaataaaccttggagtcaaaactctattgaattttccctttattttcttaagaaaaactcaaatgaactttaattccaactta 20548778  T
Q  211 gacc--ttttttaataattgaaccaaccattcaccattttcttctc 254  Q
    ||||  ||||||||||||||||||||||||||||||||||||||||    
T  20548779 gaccctttttttaataattgaaccaaccattcaccattttcttctc 20548824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 35 - 254
Target Start/End: Original strand, 16405779 - 16406000
Alignment:
Q  35 tttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt--aaaataagcaaattccatcagttgaaaattttttcctaata 132  Q
    |||||||||||||||||||| ||||| || |||||||||||||||||     ||||   |||||||||||||||||||| |||||||||||| || ||||    
T  16405779 tttaccgctttagatgtatgtttaggaaatgcgatacttagaaaaatgccaattttccaaaaataagcaaattccatcacttgaaaattttt-ccaaata 16405877  T
Q  133 aaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt--taataattgaa 230  Q
    |||||||||||||||| |||||||||||||||||||||||||||||  ||| | ||||||||||||||||||||||||||| |||||  ||| ||| |||    
T  16405878 aaccttggagtcaaaactccattgaattttccctttattttcttaatcaaatc-caaatgaactctaattccaacttagacttttttaataacaatcgaa 16405976  T
Q  231 ccaaccattcaccattttcttctc 254  Q
    ||||||||||||||||||||||||    
T  16405977 ccaaccattcaccattttcttctc 16406000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 35 - 254
Target Start/End: Complemental strand, 20329842 - 20329619
Alignment:
Q  35 tttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt----aaaataagcaaattccatcagttgaaaattttttcctaa 130  Q
    |||||||||||||||||||||||||| || |||||||||||||||||     ||||     |||||||||||||||||||| |||||| |||||||| ||    
T  20329842 tttaccgctttagatgtatgcttaggaaatgcgatacttagaaaaatgccaattttccaaaaaaataagcaaattccatcacttgaaa-ttttttccaaa 20329744  T
Q  131 taaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt--taataattg 228  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||   ||| ||||||||||||||||||||||||||||||| ||  ||| |||||    
T  20329743 taaaccttggagtcaaaactccattgaatttttcctttattttcttaa-tcaaattcaaatgaactctaattccaacttagaccttcttaataacaattg 20329645  T
Q  229 aaccaaccattcaccattttcttctc 254  Q
    |||||||||||||||||||| |||||    
T  20329644 aaccaaccattcaccatttttttctc 20329619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 14 - 235
Target Start/End: Complemental strand, 16197726 - 16197506
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt--aaaataagcaaattccatca 111  Q
    |||||||||||||||||    | |||||||||||||||||||||||| ||||||||||||||||||||||   ||||   ||||||||||||||||||||    
T  16197726 cgcacacacgttgtatg----tataccgctttagatgtatgcttaggaaacgcgatacttagaaaaatatcaattttccaaaaataagcaaattccatca 16197631  T
Q  112 gttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttag 211  Q
     |||||| |||||||| |||||||||||||||||||| ||||||| ||||| | |||||||||||||   ||||||||||||||||||||||||||||||    
T  16197630 cttgaaa-ttttttccaaataaaccttggagtcaaaactccattgcatttt-cttttattttcttaa-tcaaactcaaatgaactctaattccaacttag 16197534  T
Q  212 acct----tttttaataattgaaccaac 235  Q
    || |    ||||||||||||||||||||    
T  16197533 acattttctttttaataattgaaccaac 16197506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 35 - 254
Target Start/End: Complemental strand, 20343386 - 20343163
Alignment:
Q  35 tttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt----aaaataagcaaattccatcagttgaaaattttttcctaa 130  Q
    |||||||||||||||||||||||||| || |||||||||||||||||     ||||     ||||||||||| |||||||| |||||| |||||||  ||    
T  20343386 tttaccgctttagatgtatgcttaggaaatgcgatacttagaaaaatgccaattttccaaaaaaataagcaatttccatcacttgaaatttttttca-aa 20343288  T
Q  131 taaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt--taataattg 228  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||   ||| ||||||||||||||||||||||||||||||| ||  ||| |||||    
T  20343287 taaaccttggagtcaaaactccattgaatttttcctttattttcttaa-tcaaattcaaatgaactctaattccaacttagaccttcttaataacaattg 20343189  T
Q  229 aaccaaccattcaccattttcttctc 254  Q
    |||||||||||||||||||| |||||    
T  20343188 aaccaaccattcaccatttttttctc 20343163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 14 - 235
Target Start/End: Complemental strand, 16212735 - 16212515
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt--aaaataagcaaattccatca 111  Q
    |||||||||||||||||    | |||||||||||||||||||||||| || |||||||||||||||||||   ||||   ||||||||||||||||||||    
T  16212735 cgcacacacgttgtatg----tataccgctttagatgtatgcttaggaaatgcgatacttagaaaaatatcaattttccaaaaataagcaaattccatca 16212640  T
Q  112 gttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttag 211  Q
     |||||| |||||||| |||||||||||||||||||| ||||||| ||||| | |||||||||||||   ||||||||||||||||||||||||||||||    
T  16212639 cttgaaa-ttttttccaaataaaccttggagtcaaaactccattgcatttt-cttttattttcttaa-tcaaactcaaatgaactctaattccaacttag 16212543  T
Q  212 acct----tttttaataattgaaccaac 235  Q
    || |    ||||||||||||||||||||    
T  16212542 acattttctttttaataattgaaccaac 16212515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 35 - 235
Target Start/End: Original strand, 21730497 - 21730701
Alignment:
Q  35 tttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt---aaaataagcaaattccatcagttgaaaattttttcctaat 131  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |   ||||    |||||||||||||||||||| |||||| |||||||| |||    
T  21730497 tttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatgtcaattttccaaaaaataagcaaattccatcacttgaaa-ttttttccgaat 21730595  T
Q  132 aaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt----ttaataatt 227  Q
    ||||||||||||||||| ||||||| ||||||  |||||||||||||  ||| ||||||||||||||||||||||||||||| ||||    |||| ||||    
T  21730596 aaaccttggagtcaaaactccattgcattttct-tttattttcttaatcaaa-ctcaaatgaactctaattccaacttagacattttctttttaaaaatt 21730693  T
Q  228 gaaccaac 235  Q
    ||||||||    
T  21730694 gaaccaac 21730701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 9192966 - 9192799
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaa-tattccttttt-aaaataagcaaattccatca 111  Q
    |||||||||| |||||| |||||||||   ||||||| ||| ||||||||||||||||||||||||| ||||| ||||  ||||  ||||||||||||||    
T  9192966 cgcacacacggtgtatgttgatttaccatcttagatgcatgtttagggaacgcgatacttagaaaaaatattcattttccaaaactagcaaattccatca 9192867  T
Q  112 gttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaaga 180  Q
     |||||||||||| |  |||||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  9192866 cttgaaaattttt-ctaaataaaccttggagccaaaactccattgcattttccctttattttcttaaga 9192799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 118 - 254
Target Start/End: Complemental strand, 4147369 - 4147230
Alignment:
Q  118 aattttttcctaataaaccttggagtcaaaaatccattgaa--ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacct 215  Q
    |||||||||| || ||||||||||||||||| |||||||||  |||| |||||||||||||||  ||| | ||||| ||  |||||||| |||||||| |    
T  4147369 aattttttccaaacaaaccttggagtcaaaactccattgaatttttttcctttattttcttaaccaaatc-caaatcaatcctaattcctacttagactt 4147271  T
Q  216 tttt--taataattgaaccaaccattcaccattttcttctc 254  Q
    ||||  ||| |||||||||||||||||||||||||||||||    
T  4147270 ttttaataacaattgaaccaaccattcaccattttcttctc 4147230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 251
Target Start/End: Original strand, 5137873 - 5138007
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa--ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt 218  Q
    ||||||| || ||||||||||||||||| |||||||||  |||| |||||||||||||||  ||| | ||||||||  |||||||| |||||||| ||||    
T  5137873 tttttccaaacaaaccttggagtcaaaactccattgaatttttttcctttattttcttaatcaaatc-caaatgaatcctaattcctacttagacttttt 5137971  T
Q  219 ttaat---aattgaaccaaccattcaccattttctt 251  Q
    |||||   ||||||||||||||||||||||||||||    
T  5137972 ttaataagaattgaaccaaccattcaccattttctt 5138007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 132 - 254
Target Start/End: Original strand, 26798232 - 26798356
Alignment:
Q  132 aaaccttggagtcaaaaatccattgaattttc-cctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt--taataattg 228  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||||  ||| | ||||||||  |||||||| |||||||| |||||  ||| |||||    
T  26798232 aaaccttggagtcaaaactccattgaattttttcctttattttcttaatcaaatc-caaatgaatcctaattcctacttagacttttttaataacaattg 26798330  T
Q  229 aaccaaccattcaccattttcttctc 254  Q
    ||||||||||||||||||||||||||    
T  26798331 aaccaaccattcaccattttcttctc 26798356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 18293702 - 18293831
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| ||||||||||||||| | |||  ||||||||  |||||||| |||||||| |||||    
T  18293702 tttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaa-acaaatccaaatgaatcctaattcctacttagactttttt 18293800  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||||||||||    
T  18293801 aataacaattgaaccaaccattcaccatttt 18293831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 21481676 - 21481805
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| ||||||||||||||| | |||  ||||||||  |||||||| |||||||| |||||    
T  21481676 tttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaa-acaaatccaaatgaatcctaattcctacttagactttttt 21481774  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||||||||||    
T  21481775 aataacaattgaaccaaccattcaccatttt 21481805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 21731625 - 21731732
Alignment:
Q  130 ataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt----ttaataa 225  Q
    ||||||||||||||||||| ||||||| ||||||  |||||||||||||  ||| ||||||||||||||||||||||||||||| ||||    |||| ||    
T  21731625 ataaaccttggagtcaaaactccattgcattttct-tttattttcttaatcaaa-ctcaaatgaactctaattccaacttagacattttctttttaaaaa 21731722  T
Q  226 ttgaaccaac 235  Q
    ||||||||||    
T  21731723 ttgaaccaac 21731732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 248
Target Start/End: Complemental strand, 21886931 - 21886802
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| ||||||||||||||| | |||  ||||||||  |||||||| |||||||| |||||    
T  21886931 tttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaa-acaaatccaaatgaatcctaattcctacttagactttttt 21886833  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
       || ||||||||||||||||||| |||||    
T  21886832 aacaacaattgaaccaaccattcactatttt 21886802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 178
Target Start/End: Original strand, 16230686 - 16230842
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttttaaaat-aagcaaattccatcag 112  Q
    |||||||||||||||||    ||||||| |||||||||||| |||||  ||||||||||||||||| ||||| ||||| |||  ||   ||||||||||     
T  16230686 cgcacacacgttgtatg----tttaccgttttagatgtatgtttaggagacgcgatacttagaaaa-tattcatttttcaaagcaaattaattccatcac 16230780  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaa 178  Q
    |  ||   | |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  16230781 tcaaa---tctttcctaataaaccttggagtcaaaactccattgtatttt-cctttattttcttaa 16230842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 245
Target Start/End: Complemental strand, 15816301 - 15816175
Alignment:
Q  123 tttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt---- 218  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||  ||||||  ||||||   ||||| | |||||||| ||||        
T  15816301 tttcctaataaaccttggagtcaaaactccattgtatttt-cctttattttcttaatcaaaacttcaatgaatcttaatttctacttagacatttttttc 15816203  T
Q  219 -ttaataattgaaccaaccattcaccat 245  Q
     ||||||||||||||||| ||| |||||    
T  15816202 gttaataattgaaccaacaattaaccat 15816175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 242
Target Start/End: Original strand, 15434317 - 15434435
Alignment:
Q  127 ctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac---cttt-tttaa 222  Q
    |||||||||||||||||||| | ||||||| ||||| |||||||||||||||  ||||||  ||||||   ||||| | ||||||||   |||| |||||    
T  15434317 ctaataaaccttggagtcaacactccattgtatttt-cctttattttcttaatcaaaacttcaatgaatcttaatttctacttagacactctttctttaa 15434415  T
Q  223 taattgaaccaaccattcac 242  Q
    ||||||||||||||||||||    
T  15434416 taattgaaccaaccattcac 15434435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 21505902 - 21506005
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaat-tttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| |||||||||| | | ||||||||||||||| | |||  ||||||||  |||||||| ||||||| ||||||    
T  21505902 tttttccaaacaaaccttggagtcaaaactccattgaatatattcctttattttcttaa-acaaatccaaatgaatcctaattcctacttaga-cttttt 21505999  T
Q  220 taataa 225  Q
    ||||||    
T  21506000 taataa 21506005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 248
Target Start/End: Original strand, 18289300 - 18289434
Alignment:
Q  120 ttttttcctaataaaccttggagtcaaaaatccattgaattttcc-----ctttattttcttaagaaaaactcaaatgaactctaattccaacttagacc 214  Q
    |||||||| || ||| ||||||||||||| |||||||||||||       ||||||||||||||  ||| | ||||||||  ||||| || ||||||||     
T  18289300 ttttttccaaacaaatcttggagtcaaaactccattgaatttttttttttctttattttcttaaacaaatc-caaatgaatcctaatccctacttagact 18289398  T
Q  215 ttttt--taataattgaaccaaccattcaccatttt 248  Q
    |||||  ||| |||||||||||||||||||||||||    
T  18289399 tttttaataacaattgaaccaaccattcaccatttt 18289434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 242
Target Start/End: Original strand, 20456589 - 20456813
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcag 112  Q
    |||||||||||||||||    |||||||||| ||||||||| ||||| |||||||||||||| ||||| ||| ||||| |||  ||   ||||||||||     
T  20456589 cgcacacacgttgtatg----tttaccgctt-agatgtatgtttaggaaacgcgatacttag-aaaatgttcatttttcaaagcaaattaattccatcac 20456682  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattg-aattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttag 211  Q
    |    || | ||||||| |||||||||||||||||| |||| || | |||| |||||||||||||||   ||| |||||||||   ||||| | ||||||    
T  20456683 t---caaatctttcctactaaaccttggagtcaaaactccactgtattttttcctttattttcttaa-tcaaattcaaatgaatcttaatttccacttag 20456778  T
Q  212 acctttt----ttaataattgaaccaaccattcac 242  Q
    || ||||    ||||||||||||||||| ||||||    
T  20456779 acattttttcgttaataattgaaccaacaattcac 20456813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 15434209 - 15434270
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaa 80  Q
    |||||||||||||||||    |||||||||| ||||||||| ||||| ||||| |||||||||||||    
T  15434209 cgcacacacgttgtatg----tttaccgctt-agatgtatgtttaggaaacgcaatacttagaaaaa 15434270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 14 - 254
Target Start/End: Complemental strand, 28503910 - 28503665
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcag 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||     
T  28503910 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattctttttttaaaataagcaaattccatcac 28503811  T
Q  113 ttgaaaatttttt--cctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactta 210  Q
    |||||| ||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28503810 ttgaaatttttttttcctaataaaccttggagtcaaaactccattgaattttccctttattttcttaagaaaaactcaaatcaactctaattccaactta 28503711  T
Q  211 gac--cttttttaataattgaaccaaccattcaccattttcttctc 254  Q
    |||   ||||||||||||||||||||||||||||||||||||||||    
T  28503710 gactttttttttaataattgaaccaaccattcaccattttcttctc 28503665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 254
Target Start/End: Complemental strand, 21337210 - 21337070
Alignment:
Q  120 ttttttcctaataaaccttggagtcaaaaatccattgaa---ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctt 216  Q
    |||||||| || ||||||||||||||||| |||||||||   ||||||||||||||||||||  ||| | ||||||||  |||||||| |||||||| ||    
T  21337210 ttttttccaaacaaaccttggagtcaaaactccattgaaactttttccctttattttcttaaacaaatc-caaatgaatcctaattcctacttagacttt 21337112  T
Q  217 tttt----aataattgaaccaaccattcaccattttcttctc 254  Q
    ||||    || |||||||||||||||||||||| ||||||||    
T  21337111 tttttaataacaattgaaccaaccattcaccatgttcttctc 21337070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 121 - 254
Target Start/End: Complemental strand, 21377170 - 21377031
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa---ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttt 217  Q
    ||||||| || ||||||||||||||||| |||||||||   ||||||||||||||||||||  ||| | ||||||||  |||||||| |||||||| |||    
T  21377170 tttttccaaacaaaccttggagtcaaaactccattgaaactttttccctttattttcttaaacaaatc-caaatgaatcctaattcctacttagactttt 21377072  T
Q  218 ttt----aataattgaaccaaccattcaccattttcttctc 254  Q
    |||    || |||||||||||||||||||||| ||||||||    
T  21377071 ttttaataacaattgaaccaaccattcaccatgttcttctc 21377031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 254
Target Start/End: Complemental strand, 5516380 - 5516245
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| |||||| ||||||||  ||| | |||| |||  |||||||| |||||||| |||||    
T  5516380 tttttccaaacaaaccttggagtcaaaactccattgaattttttcctttactttcttaatcaaatc-caaacgaatcctaattcctacttagactttttt 5516282  T
Q  220 --taataattgaaccaaccattcaccattttcttctc 254  Q
      ||| ||||| |||||||||||||||||||||||||    
T  5516281 aataacaattggaccaaccattcaccattttcttctc 5516245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 254
Target Start/End: Original strand, 15324582 - 15324722
Alignment:
Q  120 ttttttcctaataaaccttggagtcaaaaatccattgaa---ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctt 216  Q
    |||||||| || ||||||||||||||||| ||||||||    ||||||||||||||||||||  ||| | ||||||||  |||||||| |||||||| ||    
T  15324582 ttttttccaaacaaaccttggagtcaaaactccattgagactttttccctttattttcttaaacaaatc-caaatgaatcctaattcctacttagacttt 15324680  T
Q  217 tttt-aata---attgaaccaaccattcaccattttcttctc 254  Q
    |||| ||||   ||||||||||||||||||||| ||||||||    
T  15324681 tttttaatatcaattgaaccaaccattcaccatgttcttctc 15324722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 254
Target Start/End: Original strand, 15504951 - 15505091
Alignment:
Q  120 ttttttcctaataaaccttggagtcaaaaatccattgaa---ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctt 216  Q
    |||||||| || ||||||||||||||||| ||||||||    ||||||||||||||||||||  ||| | ||||||||  |||||||| |||||||| ||    
T  15504951 ttttttccaaacaaaccttggagtcaaaactccattgagactttttccctttattttcttaaacaaatc-caaatgaatcctaattcctacttagacttt 15505049  T
Q  217 tttt-aata---attgaaccaaccattcaccattttcttctc 254  Q
    |||| ||||   ||||||||||||||||||||| ||||||||    
T  15505050 tttttaatatcaattgaaccaaccattcaccatgttcttctc 15505091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 248
Target Start/End: Original strand, 28263098 - 28263230
Alignment:
Q  120 ttttttcctaataaaccttggagtcaaaaatccattgaa---ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctt 216  Q
    |||||||| || ||||||||||||||||| |||||||||   |||| ||||||||||||||| | |||  ||||||||  |||||||| |||||||| ||    
T  28263098 ttttttccaaacaaaccttggagtcaaaactccattgaaacttttttcctttattttcttaa-acaaatccaaatgaatcctaattcctacttagacttt 28263196  T
Q  217 tttt--aataattgaaccaaccattcaccatttt 248  Q
    ||||  || ||||||||||||||||||| |||||    
T  28263197 tttttaaacaattgaaccaaccattcactatttt 28263230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 178
Target Start/End: Original strand, 15018084 - 15018240
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttttaaaat-aagcaaattccatcag 112  Q
    |||||||||||||||||    ||||||| |||||||||||| |||||  ||||||||||||||||| ||||| ||||| |||  ||   ||||||||||     
T  15018084 cgcacacacgttgtatg----tttaccgttttagatgtatgtttaggagacgcgatacttagaaaa-tattcatttttcaaagcaaattaattccatcac 15018178  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaa 178  Q
    |  ||   | |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  15018179 tcaaa---tctttcctaataaaccttggagtcaaaactccattgtatttt-cctttattttcttaa 15018240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 117 - 251
Target Start/End: Complemental strand, 11342515 - 11342376
Alignment:
Q  117 aaattttttc-ctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac-- 213  Q
    |||||||||| |||||||||||||||||||| |  |||||| |||||||||||||||||||||  ||||||  ||||||   ||||| | ||||||||      
T  11342515 aaattttttctctaataaaccttggagtcaacaccccattgtattttccctttattttcttaatcaaaacttcaatgaatcttaatttctacttagacac 11342416  T
Q  214 -cttt-tttaataattgaaccaaccattcaccattttctt 251  Q
     |||| ||||||||| ||||||||||||||| ||| ||||    
T  11342415 tctttctttaataatcgaaccaaccattcactattgtctt 11342376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 33242436 - 33242566
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattga-attttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||  ||||  ||||| ||||||||| ||| | ||||||||  |||||| | |||||||| |||||    
T  33242436 tttttccaaacaaaccttggagtcaaaactccattgagtttttttctttactttcttaagcaaatc-caaatgaatcctaatttctacttagactttttt 33242534  T
Q  220 taat---aattgaaccaaccattcaccatttt 248  Q
    ||||   |||||||||||||||||||||||||    
T  33242535 taataacaattgaaccaaccattcaccatttt 33242566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 33271780 - 33271910
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattga-attttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||  ||||  ||||| ||||||||| ||| | ||||||||  |||||| | |||||||| |||||    
T  33271780 tttttccaaacaaaccttggagtcaaaactccattgagtttttttctttactttcttaagcaaatc-caaatgaatcctaatttctacttagactttttt 33271878  T
Q  220 taat---aattgaaccaaccattcaccatttt 248  Q
    ||||   |||||||||||||||||||||||||    
T  33271879 taataacaattgaaccaaccattcaccatttt 33271910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 242
Target Start/End: Original strand, 21965645 - 21965763
Alignment:
Q  127 ctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac---cttt-tttaa 222  Q
    |||||||||||||||||||| | ||||||| ||||| |||||||||||||||  ||||||  ||||||   ||||| | ||||||||   |||| |||||    
T  21965645 ctaataaaccttggagtcaacactccattgtatttt-cctttattttcttaatcaaaacttcaatgaatcttaatttctacttagacactctttctttaa 21965743  T
Q  223 taattgaaccaaccattcac 242  Q
    ||||||||||||||||||||    
T  21965744 taattgaaccaaccattcac 21965763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 248
Target Start/End: Complemental strand, 2126739 - 2126605
Alignment:
Q  118 aattttttcctaataaaccttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctt 216  Q
    |||||||||| || ||| ||||||||||||| ||||||||| || | | |||||||||||||  ||| | ||||||||  |||||| | |||||||| ||    
T  2126739 aattttttccaaacaaatcttggagtcaaaactccattgaaattcttcttttattttcttaaacaaatc-caaatgaatcctaatttctacttagacttt 2126641  T
Q  217 tttt----aataattgaaccaaccattcaccatttt 248  Q
    ||||    || |||||||||||||||||||||||||    
T  2126640 ttttttataacaattgaaccaaccattcaccatttt 2126605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 248
Target Start/End: Complemental strand, 2141896 - 2141762
Alignment:
Q  118 aattttttcctaataaaccttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctt 216  Q
    |||||||||| || ||| ||||||||||||| ||||||||| || | | |||||||||||||  ||| | ||||||||  |||||| | |||||||| ||    
T  2141896 aattttttccaaacaaatcttggagtcaaaactccattgaaattcttcttttattttcttaaacaaatc-caaatgaatcctaatttctacttagacttt 2141798  T
Q  217 tttt----aataattgaaccaaccattcaccatttt 248  Q
    ||||    || |||||||||||||||||||||||||    
T  2141797 ttttttataacaattgaaccaaccattcaccatttt 2141762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 242
Target Start/End: Complemental strand, 22070756 - 22070638
Alignment:
Q  127 ctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac---cttt-tttaa 222  Q
    |||||||||||||||||||| | ||||||| ||||| |||||||||||||||  ||||||  || |||   ||||| | ||||||||   |||| |||||    
T  22070756 ctaataaaccttggagtcaacactccattgtatttt-cctttattttcttaatcaaaacttcaaggaatcttaatttctacttagacactctttctttaa 22070658  T
Q  223 taattgaaccaaccattcac 242  Q
    ||||||||||||||||||||    
T  22070657 taattgaaccaaccattcac 22070638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 11342611 - 11342547
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatat 83  Q
    |||||||||||||||||    |||||||||| ||||| ||||||||| ||||| ||||||||||||||||    
T  11342611 cgcacacacgttgtatg----tttaccgctt-agatgcatgcttaggaaacgcaatacttagaaaaatat 11342547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 254
Target Start/End: Complemental strand, 16254308 - 16254170
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||| ||||||||||||| |||||||||||| | | ||||||||||||| | |||  ||||||||  ||||| || |||||||| |||||    
T  16254308 tttttccaaacaaatcttggagtcaaaactccattgaatttcttcttttattttcttaa-acaaatccaaatgaatcctaatccctacttagactttttt 16254210  T
Q  220 t------aataattgaaccaaccattcaccattttcttctc 254  Q
    |      || ||||||||||| |||||||||||| ||||||    
T  16254209 tttaataaacaattgaaccaa-cattcaccatttccttctc 16254170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 18786436 - 18786396
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattt 161  Q
    ||||||| || ||||||||||||||||| ||||||||||||    
T  18786436 tttttccaaacaaaccttggagtcaaaactccattgaattt 18786396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 180; Significance: 3e-97; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 14 - 254
Target Start/End: Original strand, 17241694 - 17241939
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaa-tattccttttt-aaaataagcaaattccatca 111  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||   ||||| |||||||| |||||||||||    
T  17241694 cgcacacacgttgtatgttgatttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaaatatcaatttttcaaaataaggaaattccatca 17241793  T
Q  112 gttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttag 211  Q
     |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17241794 cttgaaaattttttcctaataaaccttggagtcaaaactccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttag 17241893  T
Q  212 accttttt---taataattgaaccaaccattcaccattttcttctc 254  Q
    || |||||   |||||||||||||||||||||||||||||||||||    
T  17241894 acattttttaataataattgaaccaaccattcaccattttcttctc 17241939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 14 - 248
Target Start/End: Original strand, 15387264 - 15387499
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttttaaaataagcaaattccatcagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||  |||||||||||||||| |    
T  15387264 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttaggaaaatattcttttttaa--taagcaaattccatcact 15387361  T
Q  114 tgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac 213  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||    
T  15387362 tgaaatttttttcctaataaaccttggagtcaaaactccattgcattttccctttattttcttaagcaaaattcaaatgaactttaattccaacttagac 15387461  T
Q  214 -cttt--tttaataattgaaccaaccattcaccatttt 248  Q
     ||||  ||| |||||||||||||||| ||||||||||    
T  15387462 tcttttctttcataattgaaccaaccactcaccatttt 15387499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 35 - 254
Target Start/End: Original strand, 15238290 - 15238514
Alignment:
Q  35 tttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcagttgaaaattttttcctaataa 133  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||   ||||  |||||||| ||||||||||| |||||| |||||||| |||||    
T  15238290 tttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatatcaattttccaaaataagtaaattccatcacttgaaatttttttccaaataa 15238389  T
Q  134 accttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt-----taataattg 228  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||   ||||||||||||||||||||||||||||||||| ||||     |||||||||    
T  15238390 accttggagtcaaaactccattgaatttttcctttattttcttaa-tcaaactcaaatgaactctaattccaacttagaccctttttttaataataattg 15238488  T
Q  229 aaccaaccattcaccattttcttctc 254  Q
    ||||||||| ||||||||||||||||    
T  15238489 aaccaaccactcaccattttcttctc 15238514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 14 - 248
Target Start/End: Original strand, 17095017 - 17095260
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt--aaaataagcaaattccatca 111  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||   ||||   |||||| | |||||||||||    
T  17095017 cgcacacacgttgtatgttgatttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatatcaattttctaaaaataggtaaattccatca 17095116  T
Q  112 gttgaaaatttttt-----cctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaa 206  Q
     |||||  ||||||     || |||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||||||||    
T  17095117 cttgaattttttttttcttccaaataaaccttggagtcaaaactccattgaattttccctttattttcttaa-tcaaactcaaatgaactctaattccaa 17095215  T
Q  207 cttagaccttttt---taataattgaaccaaccattcaccatttt 248  Q
    |||||||||||||   |||||||||||||||| ||||||||||||    
T  17095216 cttagaccttttttaataataattgaaccaactattcaccatttt 17095260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 35 - 254
Target Start/End: Original strand, 1662980 - 1663203
Alignment:
Q  35 tttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt--aaaataagcaaattccatcagttgaaaattttttcctaata 132  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |  |||||  |||| ||||||||||||||| ||||||| ||||||| ||||    
T  1662980 tttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatactaattttttcaaaacaagcaaattccatcacttgaaaa-tttttccaaata 1663078  T
Q  133 aaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt----taataattg 228  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||   ||||||||||||||||||||||||||||||||||||||    |||||||||    
T  1663079 aaccttggagtcaaaactccattgaattttctttttattttcttaa-tcaaactcaaatgaactctaattccaacttagacctttttttaataataattg 1663177  T
Q  229 aaccaaccattcaccattttcttctc 254  Q
    ||||||| |||||||||||| |||||    
T  1663178 aaccaactattcaccatttttttctc 1663203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 14 - 254
Target Start/End: Original strand, 15219517 - 15219758
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcag 112  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||| ||||||||||||||||||   ||||  |||||||| |||||||||||     
T  15219517 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaaacacgatacttagaaaaatatcaattttccaaaataagtaaattccatcac 15219612  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    |||||| |||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||   ||||| |||||||||||||||||||||||||    
T  15219613 ttgaaatttttttccaaataaaccttggagtcaaaactccattgaatttttcctttattttcttaa-tcaaacttaaatgaactctaattccaacttaga 15219711  T
Q  213 ccttttt-----taataattgaaccaaccattcaccattttcttctc 254  Q
    || ||||     |||||||||||||||||| ||||||||||||||||    
T  15219712 ccctttttttaataataattgaaccaaccactcaccattttcttctc 15219758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 14 - 248
Target Start/End: Original strand, 1895775 - 1896011
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt----aaaataagcaaattccat 109  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||||||||||||||||||||||   ||||     |||| |||||||||||||    
T  1895775 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatatcaattttccaaaaaaacaagcaaattccat 1895870  T
Q  110 cagttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactt 209  Q
    || |||||| |||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||   ||||||||||||||||||||||||||||    
T  1895871 cacttgaaa-ttttttccaaataaaccttggagtcaaaactccattgaattttctctttattttcttaa-tcaaactcaaatgaactctaattccaactt 1895968  T
Q  210 agaccttttt----taataattgaaccaaccattcaccatttt 248  Q
    ||||||||||    |||||| ||||||||| ||| ||||||||    
T  1895969 agacctttttttaataataactgaaccaactatttaccatttt 1896011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 14 - 248
Target Start/End: Complemental strand, 14240072 - 14239835
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt---aaaataagcaaattccatc 110  Q
    ||||||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||||| |||     ||||| ||||| |||||||    
T  14240072 cgcacacacgttgtatgttgatttaccgtcttagatgcatgcttagggaacgcgatacttagaaaaatattcatttcccaaaaaattagcaagttccatc 14239973  T
Q  111 agttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactta 210  Q
    | |||||| |||||||| |||||||||||||| ||||| ||||||| ||||||||||||||||||||||  ||| ||||||||||  |||||||||||||    
T  14239972 acttgaaatttttttcc-aataaaccttggagccaaaactccattgcattttccctttattttcttaag-caaattcaaatgaac-ataattccaactta 14239876  T
Q  211 ga--ccttt-tttaataattgaaccaaccattcaccatttt 248  Q
    ||  ||||| ||||| |||||||||||||| ||||||||||    
T  14239875 gactcctttctttaaaaattgaaccaaccactcaccatttt 14239835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 35 - 254
Target Start/End: Complemental strand, 26406971 - 26406748
Alignment:
Q  35 tttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatat-tccttttt--aaaataagcaaattccatcagttgaaaattttttcctaat 131  Q
    |||||||||||||||||||||||||| |||||||||||||| |||| || ||  ||||  |||||||||||||||||||| |||||| |||||||| |||    
T  26406971 tttaccgctttagatgtatgcttaggaaacgcgatacttaggaaaaaatatcaattttccaaaataagcaaattccatcacttgaaa-ttttttccaaat 26406873  T
Q  132 aaaccttggagtcaaaaatccattgaatttt-ccctttattttcttaagaaaaactcaaatgaac-tctaattccaacttagacctttt-ttaataattg 228  Q
    ||||||||||||||||| ||||||||||||| || |||||||||||||   ||||||||| |||| |||||||||||||||||| ||||  ||| |||||    
T  26406872 aaaccttggagtcaaaactccattgaattttaccttttattttcttaa-tcaaactcaaacgaacttctaattccaacttagactttttaataacaattg 26406774  T
Q  229 aaccaaccattcaccattttcttctc 254  Q
    ||||||||| | ||||||||||||||    
T  26406773 aaccaaccactaaccattttcttctc 26406748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 255
Target Start/End: Original strand, 12785602 - 12785845
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt----aaaataagcaaattccat 109  Q
    |||||||||||||||||    |||||||||||||||||||||||| | |||| |||| ||||||||||||   ||||     |||| ||||||||| |||    
T  12785602 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaagaaacgtgatatttagaaaaatatcaattttccaaaaaaacaagcaaatttcat 12785697  T
Q  110 cagttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactt 209  Q
    || |||||||||||| || |||||| ||||||||| ||| ||||||||| |||| ||||||||||||||  ||| |||||||||||||||||||||||||    
T  12785698 cacttgaaaattttt-ccaaataaatcttggagtccaaactccattgaactttctctttattttcttaatcaaa-ctcaaatgaactctaattccaactt 12785795  T
Q  210 agaccttttt----taataattgaaccaaccattcaccattttcttctca 255  Q
    ||||| ||||    |||||||||||||||| |||||||||||| ||||||    
T  12785796 agacccttttttaataataattgaaccaactattcaccatttttttctca 12785845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 235
Target Start/End: Complemental strand, 16245068 - 16244848
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttt-taaaataagcaaattccatcag 112  Q
    |||||||||||||||||    |||||||||||||||||||||||||| | |||||||||||| |||||||   ||||  |||| |||||||||||||||     
T  16245068 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaagcgcgatacttaggaaaatatcaattttccaaaacaagcaaattccatcat 16244973  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    ||| ||||||||||| |||||||||||||||||||| ||||||| ||||| | |||||||||||||  |||||   |||||| ||||| | | |||||||    
T  16244972 ttg-aaattttttccaaataaaccttggagtcaaaactccattgcatttt-cttttattttcttaatcaaaacctcaatgaattctaacttctacttaga 16244875  T
Q  213 ccttt----tttaataattgaaccaac 235  Q
    | |||    ||||||||||||||||||    
T  16244874 cattttctctttaataattgaaccaac 16244848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 26461443 - 26461233
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt--aaaataagcaaattccatca 111  Q
    |||||||||||||||||    ||||||||||||| |||||| ||||| |||||||| ||||| |||||  ||||||||  |||| ||   || |||||||    
T  26461443 cgcacacacgttgtatg----tttaccgctttaggtgtatgtttaggaaacgcgatgcttagcaaaatcctccttttttcaaaacaaattaactccatca 26461348  T
Q  112 gttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttag 211  Q
     |  || |||||| |  |||||||||||||||||||| ||||||| |||  |||||||||||||||| |||||||||||  ||||||||| |||||||||    
T  26461347 ctcaaatatttttcc--aataaaccttggagtcaaaactccattgtatt--ccctttattttcttaataaaaactcaaacaaactctaatcccaacttag 26461252  T
Q  212 acctttt-ttaataattga 229  Q
    ||||||| |||||||||||    
T  26461251 accttttgttaataattga 26461233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 120 - 254
Target Start/End: Complemental strand, 19639516 - 19639379
Alignment:
Q  120 ttttttcctaataaaccttggagtcaaaaatccattgaat-tttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt 218  Q
    |||||||| || ||||||||||||||||| |||||||||| ||| |||||||||||||||  ||| | ||||||||  |||||||| ||||| || ||||    
T  19639516 ttttttccaaacaaaccttggagtcaaaactccattgaatcttttcctttattttcttaaccaaatcccaaatgaatcctaattcctacttaaacttttt 19639417  T
Q  219 t--taataattgaaccaaccattcaccattttcttctc 254  Q
    |  |||||||||||||||||||||||||||||||||||    
T  19639416 taataataattgaaccaaccattcaccattttcttctc 19639379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 14 - 235
Target Start/End: Original strand, 17087052 - 17087272
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt--aaaataagcaaattccatca 111  Q
    |||||||||||||||||    |||||||||||||||||||| ||||| ||||||||||||||||||||| |  |||||  |||| |||| |||||| |||    
T  17087052 cgcacacacgttgtatg----tttaccgctttagatgtatgtttaggaaacgcgatacttagaaaaatactaattttttcaaaacaagctaattccttca 17087147  T
Q  112 gttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttag 211  Q
     |   |||| |||||| |||||||||||||||||||| ||||||| ||||| | |||||||||||||  |||||   |||||| ||||| | | ||||||    
T  17087148 ct--caaatcttttcccaataaaccttggagtcaaaactccattgcatttt-cttttattttcttaatcaaaacctcaatgaattctaacttctacttag 17087244  T
Q  212 accttt----tttaataattgaaccaac 235  Q
    || |||    ||||||||||||||||||    
T  17087245 acattttctctttaataattgaaccaac 17087272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 118 - 254
Target Start/End: Original strand, 18044093 - 18044232
Alignment:
Q  118 aattttttcctaataaaccttggagtcaaaaatccattgaa--ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacct 215  Q
    |||||||||| || ||||||||||||||||| |||||||||  |||||| |||||||||||||  ||| | ||||||||  |||||||| |||||||| |    
T  18044093 aattttttccaaacaaaccttggagtcaaaactccattgaattttttccttttattttcttaaccaaatc-caaatgaatcctaattcctacttagactt 18044191  T
Q  216 tttt--taataattgaaccaaccattcaccattttcttctc 254  Q
    ||||  ||| |||||||||||||||||||||||||||||||    
T  18044192 ttttaataacaattgaaccaaccattcaccattttcttctc 18044232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 121 - 254
Target Start/End: Complemental strand, 22727476 - 22727341
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattttc-cctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| |||||||||||||  |||||||||||||||  ||| | ||||||||  |||||||| |||||||| |||||    
T  22727476 tttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaatcaaatc-caaatgaatcctaattcctacttagactttttt 22727378  T
Q  220 --taataattgaaccaaccattcaccattttcttctc 254  Q
      ||| |||||||||||||||||||||||||||||||    
T  22727377 aataacaattgaaccaaccattcaccattttcttctc 22727341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 254
Target Start/End: Original strand, 14675674 - 14675810
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattttc-cctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| |||||||||||||  |||||||||||||||  ||| | ||||||||  ||||| || |||||||| |||||    
T  14675674 tttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaaacaaatc-caaatgaatcctaatccctacttagactttttt 14675772  T
Q  220 taataa---ttgaaccaaccattcaccattttcttctc 254  Q
    ||||||   |||||||||||||||||||||||||||||    
T  14675773 taataacaattgaaccaaccattcaccattttcttctc 14675810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 132 - 254
Target Start/End: Complemental strand, 5199877 - 5199753
Alignment:
Q  132 aaaccttggagtcaaaaatccattgaattttc-cctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt--taataattg 228  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||||  ||| | ||||||||  |||||||| |||||||| |||||  ||| |||||    
T  5199877 aaaccttggagtcaaaactccattgaattttttcctttattttcttaaccaaatc-caaatgaatcctaattcctacttagacttttttaataacaattg 5199779  T
Q  229 aaccaaccattcaccattttcttctc 254  Q
    ||||||||||||||||||||||||||    
T  5199778 aaccaaccattcaccattttcttctc 5199753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 251
Target Start/End: Complemental strand, 15299421 - 15299283
Alignment:
Q  117 aaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac--- 213  Q
    ||||||||| |||||||||||||||||||| | ||||||| |||||||||||||||||||||  ||||||  ||||||   ||||| | ||||||||       
T  15299421 aaatttttttctaataaaccttggagtcaacactccattgtattttccctttattttcttaatcaaaacttcaatgaatcttaatttctacttagacact 15299322  T
Q  214 cttt-tttaataattgaaccaaccattcaccattttctt 251  Q
    |||| ||||||||| ||||||||||||||| ||| ||||    
T  15299321 ctttctttaataatcgaaccaaccattcactattgtctt 15299283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 13441228 - 13441357
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| | ||||||||||||| | |||  ||||||||  |||||||| |||||||| |||||    
T  13441228 tttttccaaacaaaccttggagtcaaaactccattgaattttttcttttattttcttaa-acaaatccaaatgaatcctaattcctacttagactttttt 13441326  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||||||||||    
T  13441327 aataacaattgaaccaaccattcaccatttt 13441357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 251
Target Start/End: Complemental strand, 15269080 - 15268941
Alignment:
Q  117 aaattttttc-ctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac-- 213  Q
    |||||||||| |||||||||||||||||||| | ||||||| |||||||||||||||||||||  ||||||  ||||||   ||||| | ||||||||      
T  15269080 aaattttttctctaataaaccttggagtcaacactccattgtattttccctttattttcttaatcaaaacttcaatgaatcttaatttctacttagacac 15268981  T
Q  214 -cttt-tttaataattgaaccaaccattcaccattttctt 251  Q
     |||| ||||||||| ||||||||||||||| ||| ||||    
T  15268980 tctttctttaataatcgaaccaaccattcactattgtctt 15268941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 254
Target Start/End: Complemental strand, 9247733 - 9247597
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||| ||||||||||||| |||||||||||| | | |||||||||||||  ||| | ||||||||  |||||| | |||||||| |||||    
T  9247733 tttttccaaacaaatcttggagtcaaaactccattgaatttcttcttttattttcttaaacaaatc-caaatgaatcctaatttctacttagactttttt 9247635  T
Q  220 taataa---ttgaaccaaccattcaccattttcttctc 254  Q
    ||||||   |||||| ||||||||||||||||||||||    
T  9247634 taataacaattgaactaaccattcaccattttcttctc 9247597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 17009600 - 17009729
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattg-aattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||| |||| | | ||||||||||||| | |||  ||||||||  |||||| | |||||||| |||||    
T  17009600 tttttccaaacaaaccttggagtcaaaactccattgaaattcttcttttattttcttaa-acaaatccaaatgaaacctaatttctacttagactttttt 17009698  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||||||||||    
T  17009699 aataacaattgaaccaaccattcaccatttt 17009729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 17023565 - 17023694
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattg-aattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||| |||| | | ||||||||||||| | |||  ||||||||  |||||| | |||||||| |||||    
T  17023565 tttttccaaacaaaccttggagtcaaaactccattgaaattcttcttttattttcttaa-acaaatccaaatgaaacctaatttctacttagactttttt 17023663  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||||||||||    
T  17023664 aataacaattgaaccaaccattcaccatttt 17023694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 242
Target Start/End: Complemental strand, 18465140 - 18465019
Alignment:
Q  123 tttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt---- 218  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||   ||| |||||||||   ||||| | |||||||| ||||        
T  18465140 tttcctaataaaccttggagtcaaaactccattgtatttt-cctttattttcttaa-tcaaattcaaatgaatcttaatttctacttagacattttttcg 18465043  T
Q  219 ttaataattgaaccaaccattcac 242  Q
    ||||||||||||||||| ||||||    
T  18465042 ttaataattgaaccaacaattcac 18465019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 242
Target Start/End: Original strand, 20757405 - 20757526
Alignment:
Q  123 tttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt---- 218  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||   ||| |||||||||   ||||| | |||||||| ||||        
T  20757405 tttcctaataaaccttggagtcaaaactccattgtatttt-cctttattttcttaa-tcaaattcaaatgaatcttaatttctacttagacatttttttg 20757502  T
Q  219 ttaataattgaaccaaccattcac 242  Q
    ||||||||||||||||| ||||||    
T  20757503 ttaataattgaaccaacaattcac 20757526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 242
Target Start/End: Original strand, 20763796 - 20763917
Alignment:
Q  123 tttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt---- 218  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||   ||| |||||||||   ||||| | |||||||| ||||        
T  20763796 tttcctaataaaccttggagtcaaaactccattgtatttt-cctttattttcttaa-tcaaattcaaatgaatcttaatttctacttagacatttttttg 20763893  T
Q  219 ttaataattgaaccaaccattcac 242  Q
    ||||||||||||||||| ||||||    
T  20763894 ttaataattgaaccaacaattcac 20763917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 242
Target Start/End: Complemental strand, 15395979 - 15395861
Alignment:
Q  127 ctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac---cttt-tttaa 222  Q
    |||||||||||||||||||| | ||||||| ||||| |||||||||||||||  ||||||  ||||||   ||||| | ||||||||   |||| |||||    
T  15395979 ctaataaaccttggagtcaacactccattgtatttt-cctttattttcttaatcaaaacttcaatgaatcttaatttctacttagacactctttctttaa 15395881  T
Q  223 taattgaaccaaccattcac 242  Q
    ||||||||||||||||||||    
T  15395880 taattgaaccaaccattcac 15395861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 242
Target Start/End: Complemental strand, 15399904 - 15399786
Alignment:
Q  127 ctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac---cttt-tttaa 222  Q
    |||||||||||||||||||| | ||||||| ||||| |||||||||||||||  ||||||  ||||||   ||||| | ||||||||   |||| |||||    
T  15399904 ctaataaaccttggagtcaacactccattgtatttt-cctttattttcttaatcaaaacttcaatgaatcttaatttctacttagacactctttctttaa 15399806  T
Q  223 taattgaaccaaccattcac 242  Q
    ||||||||||||||||||||    
T  15399805 taattgaaccaaccattcac 15399786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 178
Target Start/End: Original strand, 16281150 - 16281306
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttttaaaat-aagcaaattccatcag 112  Q
    |||||||||||||||||    ||||||| ||||||||||||  ||||  ||||||||||||||||| ||||| ||||| |||  ||   ||||||||||     
T  16281150 cgcacacacgttgtatg----tttaccgttttagatgtatgtgtaggagacgcgatacttagaaaa-tattcatttttcaaagcaaattaattccatca- 16281243  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaa 178  Q
    || |||  | |||||||||||||||||||||||||  ||||||| ||||| |||||||||||||||    
T  16281244 ttcaaa--tctttcctaataaaccttggagtcaaagctccattgtatttt-cctttattttcttaa 16281306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 14657240 - 14657371
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| | ||||||||||||| | |||  ||||||||  |||||||| ||||||   |||||    
T  14657240 tttttccaaacaaaccttggagtcaaaactccattgaattttttcttttattttcttaa-acaaatccaaatgaatcctaattcctacttagcttttttt 14657338  T
Q  220 ----taataattgaaccaaccattcaccatttt 248  Q
        ||| |||||||||||||||||||||||||    
T  14657339 tttataacaattgaaccaaccattcaccatttt 14657371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 30278443 - 30278572
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt- 218  Q
    ||||||| || ||||||||||||||||| ||||| ||| |||| | ||||||||||||| | |||  ||||||||  |||||| | |||||||| ||||     
T  30278443 tttttccaaacaaaccttggagtcaaaactccatcgaattttttcttttattttcttaa-acaaatccaaatgaatcctaatttctacttagactttttc 30278541  T
Q  219 -ttaataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||||||||||    
T  30278542 aataacaattgaaccaaccattcaccatttt 30278572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 242
Target Start/End: Complemental strand, 15376155 - 15376037
Alignment:
Q  127 ctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac---cttt-tttaa 222  Q
    |||||||||||||||||||| | |||| || ||||||| |||||||||||||  ||||||  ||||||   ||||| | ||||||||   |||| |||||    
T  15376155 ctaataaaccttggagtcaacactccaatgtattttcc-tttattttcttaatcaaaacttcaatgaatcttaatttctacttagacactctttctttaa 15376057  T
Q  223 taattgaaccaaccattcac 242  Q
    ||||||||||||||||||||    
T  15376056 taattgaaccaaccattcac 15376037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 248
Target Start/End: Complemental strand, 14658697 - 14658564
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| | ||||||||||||| | |||  ||||||||  |||||| | |||||| | |||||    
T  14658697 tttttccaaacaaaccttggagtcaaaactccattgaattttttcttttattttcttaa-acaaatccaaatgaatcctaatttctacttaggctttttt 14658599  T
Q  220 ------taataattgaaccaaccattcaccatttt 248  Q
          ||| |||||||||||||||||||||||||    
T  14658598 tttttataacaattgaaccaaccattcaccatttt 14658564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 242
Target Start/End: Original strand, 46660312 - 46660436
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac---cttt 217  Q
    ||||| ||||||||| |||||||||| | ||||||| | ||||| |||||||||||||  ||||||  ||||||   ||||| | ||||||||   ||||    
T  46660312 ttttttctaataaactttggagtcaacactccattgtactttcc-tttattttcttaatcaaaacttcaatgaatcttaatttctacttagacactcttt 46660410  T
Q  218 -tttaataattgaaccaaccattcac 242  Q
     |||||||||||||||||||||||||    
T  46660411 ctttaataattgaaccaaccattcac 46660436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 27167942 - 27167996
Alignment:
Q  129 aataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaa 183  Q
    ||||||| |||||||||||| ||| ||||  ||||| ||||||||||||||||||    
T  27167942 aataaactttggagtcaaaactcctttgatgtttccttttattttcttaagaaaa 27167996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 20757306 - 20757367
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaa 80  Q
    |||||||||||||||||    |||||||||| ||||||||| ||||| ||||| |||||||||||||    
T  20757306 cgcacacacgttgtatg----tttaccgctt-agatgtatgtttaggaaacgcaatacttagaaaaa 20757367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 178; Significance: 4e-96; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 14 - 254
Target Start/End: Complemental strand, 12963901 - 12963659
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttttaaaataagcaaattccatcagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||| |    
T  12963901 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttaggaaaatatt-cttttttaaataagcaaattccatcact 12963803  T
Q  114 tga---aaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactta 210  Q
    |||   |  ||||||| ||||||| ||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12963802 tgaattattttttttcataataaagcttggagtcgaaactccattgaattttcccttcattttcttaagaaaaactcaaatgaactctaattccaactta 12963703  T
Q  211 gaccttttttaataattgaaccaaccattcaccattttcttctc 254  Q
    ||| ||||||||||||||||||||||||||||||||||||||||    
T  12963702 gactttttttaataattgaaccaaccattcaccattttcttctc 12963659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 14 - 254
Target Start/End: Original strand, 14854637 - 14854876
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttttaaaata-agcaaattccatcag 112  Q
    ||||||||||||||||| ||||||||||  ||||||| ||||||||||||||||||||||||||||| || | |||| ||||   ||||||||||||||     
T  14854637 cgcacacacgttgtatgttgatttaccgtcttagatgcatgcttagggaacgcgatacttagaaaaa-atacattttcaaaaactagcaaattccatcac 14854735  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14854736 ttgaaa-ttttttcctaataaaccttggagtcaaaactccattgaattttccctttattttcttaagcaaaactcaaatgaactctaattccaacttaga 14854834  T
Q  213 ccttttttaataattgaaccaaccattcaccattttcttctc 254  Q
    | |||||||||||||||||||||||||| |||||||||||||    
T  14854835 ctttttttaataattgaaccaaccattcgccattttcttctc 14854876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 14 - 254
Target Start/End: Complemental strand, 28197240 - 28196997
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcag 112  Q
    ||||||||||||||||| |||||||| |  ||||||||||||||||||||||||||||||||||||||||   ||||  ||||||||||||||||||||     
T  28197240 cgcacacacgttgtatgttgatttactgtcttagatgtatgcttagggaacgcgatacttagaaaaatatcaattttccaaaataagcaaattccatcac 28197141  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    |||||||   |||||||||||||||||||||||||  ||||| |||||||||||||||||||||||   |||||||||||||||||||||||||| ||||    
T  28197140 ttgaaaaaaatttcctaataaaccttggagtcaaagctccatagaattttccctttattttcttaa-tcaaactcaaatgaactctaattccaacgtaga 28197042  T
Q  213 cc---ttttttaataattgaaccaaccattcaccattttcttctc 254  Q
    ||   ||||||||||||||||||||||||||||||||||||||||    
T  28197041 cctttttttttaataattgaaccaaccattcaccattttcttctc 28196997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 14 - 254
Target Start/End: Original strand, 25179533 - 25179775
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt----aaaataagcaaattccat 109  Q
    |||||||||||||||||    |||||||||||||||||||| ||||| ||||||||||||||||||||||   ||||     |||||| | |||||||||    
T  25179533 cgcacacacgttgtatg----tttaccgctttagatgtatgtttaggaaacgcgatacttagaaaaatatcaattttccaaaaaaataggtaaattccat 25179628  T
Q  110 cagttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactt 209  Q
    || |||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||| |||||||    
T  25179629 cacttgaaatttttttccaaataaaccttggagtcaaaactccattgaattttccctttattttcttaa-tcaaactcaaatgaactctaatcccaactt 25179727  T
Q  210 agaccttttt---taataattgaaccaaccattcaccattttcttctc 254  Q
    ||||||||||   |||||||||||||||||||||||||||||||||||    
T  25179728 agaccttttttaataataattgaaccaaccattcaccattttcttctc 25179775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 35 - 247
Target Start/End: Complemental strand, 4112728 - 4112513
Alignment:
Q  35 tttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcagttgaaaattttttcctaataa 133  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||   ||||  ||||  |||||||||||||| |||||||||||| ||||||||    
T  4112728 tttaccgctttagatgtatgtttaggaaacgcgatacttagaaaaatatcaattttccaaaactagcaaattccatcacttgaaaattttt-cctaataa 4112630  T
Q  134 accttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac-cttt--tttaataattgaa 230  Q
    ||||||||||||||| || ||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||| ||||  |||||||||||||    
T  4112629 accttggagtcaaaactctattgaattttccctttattttcttaagcaaaattcaaatgaactttaattccaacttagactcttttctttaataattgaa 4112530  T
Q  231 ccaaccattcaccattt 247  Q
    ||||| | |||||||||    
T  4112529 ccaactactcaccattt 4112513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 14 - 248
Target Start/End: Complemental strand, 12048256 - 12048022
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttttaaaataagc-aaattccatcag 112  Q
    ||||||||||||||||| ||||||||||  ||||||| ||| |||||||||||||||||   |||||||||| ||||  |||   || |||||||||||     
T  12048256 cgcacacacgttgtatgttgatttaccgtcttagatgcatgtttagggaacgcgatact---aaaaatattcattttccaaaactgcaaaattccatcac 12048160  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    || ||||||||||   |||||||||||||||||||| ||||||| |||||||||||||||||||||| |||| | ||||||||| |||||||||||||||    
T  12048159 tt-aaaattttttttaaataaaccttggagtcaaaactccattgcattttccctttattttcttaagcaaaatttaaatgaactttaattccaacttaga 12048061  T
Q  213 c-cttt--tttaataattgaaccaaccattcaccatttt 248  Q
    | ||||  |||||||||||||||||||| ||||||||||    
T  12048060 ctcttttctttaataattgaaccaaccactcaccatttt 12048022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 14 - 248
Target Start/End: Complemental strand, 17029192 - 17028959
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttttaaaataagcaaattccatcagt 113  Q
    |||||||||||||||||    |||||||  ||||||| ||||||||||||| |||||||||||||||||    ||   |||||||||||||||||||| |    
T  17029192 cgcacacacgttgtatg----tttaccgtcttagatgcatgcttagggaacacgatacttagaaaaatacattttcaaaaaataagcaaattccatcact 17029097  T
Q  114 tgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac 213  Q
    ||||||    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||    
T  17029096 tgaaaaaaaattcctaataaacctt-gagtcaaaactccattgaattttccctttattttcttaagaaaaactcaaatgaatgttaaatccaacttagac 17028998  T
Q  214 -cttt--tttaat-aattgaaccaaccattcaccatttt 248  Q
     ||||  |||||| |||||||||||||| ||||||||||    
T  17028997 tcttttctttaataaattgaaccaaccactcaccatttt 17028959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 24376771 - 24376958
Alignment:
Q  35 tttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-----aaaataagcaaattccatcagttgaaaattttttccta 129  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||   ||||      |||| ||||||||||||||| || |||||||||||  |    
T  24376771 tttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatatcaattttccaaaaaaaacaagcaaattccatcactttaaaattttttca-a 24376869  T
Q  130 ataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt 218  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||  ||||| | |||||||||||| | | |||||||| ||||    
T  24376870 ataaaccttggagtcaaaactccattgaattttctctttattttcttaatcaaaaccccaatgaactctaacttctacttagacatttt 24376958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 247
Target Start/End: Original strand, 20134554 - 20134788
Alignment:
Q  15 gcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt----aaaata-agcaaattccat 109  Q
    ||||||||||||||||    ||||||| |||||||||||| ||||| | |||| ||||||||||| ||||| |||||    |||| | ||||||||||||    
T  20134554 gcacacacgttgtatg----tttaccg-tttagatgtatgtttaggaagcgcgttacttagaaaa-tattcatttttttaaaaaagatagcaaattccat 20134647  T
Q  110 cagttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactt 209  Q
    || |||||| ||||| ||||||||||||||||||||||| ||||||| ||| | |||||||||||||||  ||||||  |||||| | ||||||| ||||    
T  20134648 cacttgaaattttttccctaataaaccttggagtcaaaactccattgtattct-cctttattttcttaaccaaaacttcaatgaattttaattcctactt 20134746  T
Q  210 agaccttt----tttaataattgaaccaaccattcaccattt 247  Q
    |||| |||    |||||||||||||||||| |||||| ||||    
T  20134747 agacatttttcctttaataattgaaccaacaattcactattt 20134788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 247
Target Start/End: Complemental strand, 22198315 - 22198081
Alignment:
Q  15 gcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt----aaaata-agcaaattccat 109  Q
    ||||||||||||||||    ||||||| |||||||||||| ||||| | |||| ||||||||||| ||||| |||||    |||| | ||||||||||||    
T  22198315 gcacacacgttgtatg----tttaccg-tttagatgtatgtttaggaagcgcgttacttagaaaa-tattcatttttttaaaaaagatagcaaattccat 22198222  T
Q  110 cagttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactt 209  Q
    || |||||| ||||| ||||||||||||||||||||||| ||||||| ||| | |||||||||||||||  ||||||  |||||| | ||||||| ||||    
T  22198221 cacttgaaattttttccctaataaaccttggagtcaaaactccattgtattct-cctttattttcttaaccaaaacttcaatgaattttaattcctactt 22198123  T
Q  210 agaccttt----tttaataattgaaccaaccattcaccattt 247  Q
    |||| |||    |||||||||||||||||| |||||| ||||    
T  22198122 agacatttttcctttaataattgaaccaacaattcactattt 22198081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 30720793 - 30720649
Alignment:
Q  17 acacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt----aaaataagcaaattccatcag 112  Q
    ||||||||||||||    |||||||| ||||||||||||||||| ||||||||||||||||||||||   ||||     |||| |||||||||||||||     
T  30720793 acacacgttgtatg----tttaccgccttagatgtatgcttaggaaacgcgatacttagaaaaatatcaattttccataaaaacaagcaaattccatcac 30720698  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaatttt 162  Q
    |||||||||||| || || ||||||||||||||||| |||||||||||||    
T  30720697 ttgaaaattttt-ccaaaaaaaccttggagtcaaaactccattgaatttt 30720649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 254
Target Start/End: Original strand, 12621550 - 12621685
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattttc-cctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| |||||||||||||  |||||||||||||||  ||| | ||||||||  ||||| || |||||||| |||||    
T  12621550 tttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaaacaaatc-caaatgaatcctaatccctacttagactttttt 12621648  T
Q  220 --taataattgaaccaaccattcaccattttcttctc 254  Q
      ||| |||||||||||||||||||||||||||||||    
T  12621649 aataacaattgaaccaaccattcaccattttcttctc 12621685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 17086790 - 17086552
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatactt-agaaaaatattcctt--tttaaaataagcaaattccatc 110  Q
    |||||||||||||||||    |||||||||||||||||||| ||||| |||||||||||| ||||||||| |  ||  || |||| |||| |||||||||    
T  17086790 cgcacacacgttgtatg----tttaccgctttagatgtatgtttaggaaacgcgatacttaagaaaaatactattttcttcaaaacaagctaattccatc 17086695  T
Q  111 agttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactct-aattccaactt 209  Q
    | |   |||| |||||  |||||||||||||||||||| ||||||| ||||| | |||||||||||||  |||||   |||||| ||| || | | || |    
T  17086694 act--caaatcttttctcaataaaccttggagtcaaaactccattgtatttt-cttttattttcttaatcaaaacctcaatgaattctaaacttctacct 17086598  T
Q  210 agacctt----ttttaataattgaaccaaccattcaccattttctt 251  Q
    |||| ||    |||||||||||||||||||||||||||||||||||    
T  17086597 agacattttccttttaataattgaaccaaccattcaccattttctt 17086552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 3043672 - 3043801
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| ||||||||||||||| | |||  ||||||||  |||||||| |||||||| |||||    
T  3043672 tttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaa-acaaatccaaatgaatcctaattcctacttagactttttt 3043770  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||||||||||    
T  3043771 aataacaattgaaccaaccattcaccatttt 3043801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 254
Target Start/End: Complemental strand, 19900503 - 19900368
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| |||||| ||||||||  ||| | |||| |||  |||||||| |||||||| |||||    
T  19900503 tttttccaaacaaaccttggagtcaaaactccattgaattttttcctttactttcttaatcaaatc-caaacgaatcctaattcctacttagactttttt 19900405  T
Q  220 --taataattgaaccaaccattcaccattttcttctc 254  Q
      ||| ||||| |||||||||||||||||||||||||    
T  19900404 aataacaattggaccaaccattcaccattttcttctc 19900368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 20156257 - 20156397
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt----aaaataagcaaattccat 109  Q
    |||||||||||||||||    |||||||||| ||||||||| ||||| |||||| ||||||||||||||| | ||||     ||||  ||||||||||||    
T  20156257 cgcacacacgttgtatg----tttaccgctt-agatgtatgtttaggaaacgcgctacttagaaaaatatccattttctcaaaaaaatagcaaattccat 20156351  T
Q  110 cagttgaaaattttttcctaataaaccttggagtcaaaaatccattg 156  Q
    || |||||| |||||||  |||||||||||||||||||| |||||||    
T  20156352 cacttgaaa-ttttttctcaataaaccttggagtcaaaactccattg 20156397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 22176575 - 22176435
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt----aaaataagcaaattccat 109  Q
    |||||||||||||||||    |||||||||| ||||||||| ||||| |||||| ||||||||||||||| | ||||     ||||  ||||||||||||    
T  22176575 cgcacacacgttgtatg----tttaccgctt-agatgtatgtttaggaaacgcgctacttagaaaaatatccattttctcaaaaaaatagcaaattccat 22176481  T
Q  110 cagttgaaaattttttcctaataaaccttggagtcaaaaatccattg 156  Q
    || |||||| |||||||  |||||||||||||||||||| |||||||    
T  22176480 cacttgaaa-ttttttctcaataaaccttggagtcaaaactccattg 22176435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 254
Target Start/End: Complemental strand, 18814930 - 18814794
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattttcc--ctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt 218  Q
    ||||||| || ||||||||||||||||| ||| |||||||||    ||||||||||||||  ||| | ||||||||  ||||| || |||||||| ||||    
T  18814930 tttttccaaacaaaccttggagtcaaaactcctttgaattttttttctttattttcttaaacaaatc-caaatgaatcctaatccctacttagacttttt 18814832  T
Q  219 t--taataattgaaccaaccattcaccattttcttctc 254  Q
    |  ||| |||||||||||||||||||||||||||||||    
T  18814831 taataacaattgaaccaaccattcaccattttcttctc 18814794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 178
Target Start/End: Original strand, 924307 - 924463
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttttaaaat-aagcaaattccatcag 112  Q
    |||||||||||||||||    ||||||| |||||||||||| |||||  ||||||||||||||||| ||||| ||||| |||  ||   ||||||||||     
T  924307 cgcacacacgttgtatg----tttaccgttttagatgtatgtttaggagacgcgatacttagaaaa-tattcatttttcaaagcaaattaattccatcac 924401  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaa 178  Q
    |  ||   | |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  924402 tcaaa---tctttcctaataaaccttggagtcaaaactccattgtatttt-cctttattttcttaa 924463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 248
Target Start/End: Complemental strand, 24295216 - 24295084
Alignment:
Q  120 ttttttcctaataaaccttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt 218  Q
    |||||||| || ||||||||||||||||| |||||||||||| | | ||||||||||||| | |||  ||||||||  |||||| | |||||||||||||    
T  24295216 ttttttccaaacaaaccttggagtcaaaactccattgaatttcttcttttattttcttaa-acaaatccaaatgaatcctaatttctacttagacctttt 24295118  T
Q  219 t----taataattgaaccaaccattcaccatttt 248  Q
    |    ||| |||||||||||| ||||||||||||    
T  24295117 tttaataacaattgaaccaactattcaccatttt 24295084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 248
Target Start/End: Complemental strand, 24309234 - 24309102
Alignment:
Q  120 ttttttcctaataaaccttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt 218  Q
    |||||||| || ||||||||||||||||| |||||||||||| | | ||||||||||||| | |||  ||||||||  |||||| | |||||||||||||    
T  24309234 ttttttccaaacaaaccttggagtcaaaactccattgaatttcttcttttattttcttaa-acaaatccaaatgaatcctaatttctacttagacctttt 24309136  T
Q  219 t----taataattgaaccaaccattcaccatttt 248  Q
    |    ||| |||||||||||| ||||||||||||    
T  24309135 tttaataacaattgaaccaactattcaccatttt 24309102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 248
Target Start/End: Complemental strand, 15401975 - 15401846
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| | ||||||||||||| | |||  |||||||   |||||||| |||||||| |||||    
T  15401975 tttttccaaacaaaccttggagtcaaaactccattgaattttttcttttattttcttaa-acaaatccaaatgactcctaattcctacttagactttttt 15401877  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||| ||||||    
T  15401876 aataacaattgaaccaaccattcaacatttt 15401846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 248
Target Start/End: Complemental strand, 15413762 - 15413633
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| | ||||||||||||| | |||  |||||||   |||||||| |||||||| |||||    
T  15413762 tttttccaaacaaaccttggagtcaaaactccattgaattttttcttttattttcttaa-acaaatccaaatgactcctaattcctacttagactttttt 15413664  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||| ||||||    
T  15413663 aataacaattgaaccaaccattcaacatttt 15413633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 248
Target Start/End: Complemental strand, 15429355 - 15429226
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| | ||||||||||||| | |||  |||||||   |||||||| |||||||| |||||    
T  15429355 tttttccaaacaaaccttggagtcaaaactccattgaattttttcttttattttcttaa-acaaatccaaatgactcctaattcctacttagactttttt 15429257  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||| ||||||    
T  15429256 aataacaattgaaccaaccattcaacatttt 15429226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 248
Target Start/End: Complemental strand, 34471286 - 34471157
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||| ||||||||||||| |||||||||||| | | |||||||||||||  ||| | ||||||||  |||||| | |||||||| |||||    
T  34471286 tttttccaaacaaatcttggagtcaaaactccattgaatttcttcttttattttcttaaacaaatc-caaatgaatcctaatttctacttagactttttt 34471188  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||||||||||    
T  34471187 aataacaattgaaccaaccattcaccatttt 34471157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 242
Target Start/End: Original strand, 20424651 - 20424772
Alignment:
Q  123 tttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt---- 218  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||   ||| |||||||||   ||||| | |||||||| ||||        
T  20424651 tttcctaataaaccttggagtcaaaactccattgtatttt-cctttattttcttaa-tcaaattcaaatgaatcttaatttctacttagacattttttcg 20424748  T
Q  219 ttaataattgaaccaaccattcac 242  Q
    ||||||||||||||||| ||||||    
T  20424749 ttaataattgaaccaacaattcac 20424772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 248
Target Start/End: Complemental strand, 22923741 - 22923622
Alignment:
Q  132 aaaccttggagtcaaaaatccattga--attttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt--taataatt 227  Q
    ||||||||||||||||| ||||||||   |||| ||||||||||||||| | |||  ||||||||  |||||||| |||||||| |||||  ||| |||     
T  22923741 aaaccttggagtcaaaactccattgattttttttcctttattttcttaa-acaaatccaaatgaatcctaattcctacttagacttttttaataacaatg 22923643  T
Q  228 gaaccaaccattcaccatttt 248  Q
    |||||||||||||||||||||    
T  22923642 gaaccaaccattcaccatttt 22923622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 248
Target Start/End: Complemental strand, 22939453 - 22939334
Alignment:
Q  132 aaaccttggagtcaaaaatccattga--attttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt--taataatt 227  Q
    ||||||||||||||||| ||||||||   |||| ||||||||||||||| | |||  ||||||||  |||||||| |||||||| |||||  ||| |||     
T  22939453 aaaccttggagtcaaaactccattgattttttttcctttattttcttaa-acaaatccaaatgaatcctaattcctacttagacttttttaataacaatg 22939355  T
Q  228 gaaccaaccattcaccatttt 248  Q
    |||||||||||||||||||||    
T  22939354 gaaccaaccattcaccatttt 22939334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 248
Target Start/End: Complemental strand, 23861898 - 23861779
Alignment:
Q  132 aaaccttggagtcaaaaatccattga--attttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt--taataatt 227  Q
    ||||||||||||||||| ||||||||   |||| ||||||||||||||| | |||  ||||||||  |||||||| |||||||| |||||  ||| |||     
T  23861898 aaaccttggagtcaaaactccattgattttttttcctttattttcttaa-acaaatccaaatgaatcctaattcctacttagacttttttaataacaatg 23861800  T
Q  228 gaaccaaccattcaccatttt 248  Q
    |||||||||||||||||||||    
T  23861799 gaaccaaccattcaccatttt 23861779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 26984707 - 26984835
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt- 219  Q
    ||||||| || ||| ||||||||||||| ||||||||||||   |||||||||||||| | |||  ||||||||  |||||| | |||||||| |||||     
T  26984707 tttttccaaacaaatcttggagtcaaaactccattgaatttcttctttattttcttaa-acaaatccaaatgaatcctaatttctacttagactttttta 26984805  T
Q  220 -taataattgaaccaaccattcaccatttt 248  Q
     ||| ||| |||||||||||||||||||||    
T  26984806 ataacaatcgaaccaaccattcaccatttt 26984835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 27035770 - 27035898
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt- 219  Q
    ||||||| || ||| ||||||||||||| ||||||||||||   |||||||||||||| | |||  ||||||||  |||||| | |||||||| |||||     
T  27035770 tttttccaaacaaatcttggagtcaaaactccattgaatttcttctttattttcttaa-acaaatccaaatgaatcctaatttctacttagactttttta 27035868  T
Q  220 -taataattgaaccaaccattcaccatttt 248  Q
     ||| ||| |||||||||||||||||||||    
T  27035869 ataacaatcgaaccaaccattcaccatttt 27035898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 178
Target Start/End: Original strand, 8765530 - 8765584
Alignment:
Q  123 tttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaa 178  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  8765530 tttcctaataaaccttggagtcaaaactccattgtatttt-cctttattttcttaa 8765584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 254
Target Start/End: Complemental strand, 13288596 - 13288462
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||| ||||||||||||| ||||||||| || | | ||||||||||||| | |||  ||||||||  |||||||| |||||||| |||||    
T  13288596 tttttccaaacaaatcttggagtcaaaactccattgaagttcttcttttattttcttaa-acaaatccaaatgaatcctaattcctacttagactttttt 13288498  T
Q  220 taat--aattgaaccaaccattcaccattttcttctc 254  Q
    | ||  ||||| ||||| |||||||||||| ||||||    
T  13288497 ttataaaattggaccaa-cattcaccatttccttctc 13288462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 254
Target Start/End: Complemental strand, 13303563 - 13303429
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||| ||||||||||||| ||||||||| || | | ||||||||||||| | |||  ||||||||  |||||||| |||||||| |||||    
T  13303563 tttttccaaacaaatcttggagtcaaaactccattgaagttcttcttttattttcttaa-acaaatccaaatgaatcctaattcctacttagactttttt 13303465  T
Q  220 taat--aattgaaccaaccattcaccattttcttctc 254  Q
    | ||  ||||| ||||| |||||||||||| ||||||    
T  13303464 ttataaaattggaccaa-cattcaccatttccttctc 13303429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 14 - 248
Target Start/End: Original strand, 7107 - 7344
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcag 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||     
T  7107 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttaggaaaatattctttttttaaaataagcaaattccatcac 7206  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||    
T  7207 ttgaaaatttt-tcctaataaaccttggagtcaaaactccattgaattttccctttattttcttaagcaaaattcaaatgaactttaattccaacttaga 7305  T
Q  213 c-cttt--tttaataattgaaccaaccattcaccatttt 248  Q
    | ||||  |||||||||||||||||||| ||||||||||    
T  7306 ctcttttctttaataattgaaccaaccactcaccatttt 7344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 168; Significance: 4e-90; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 14 - 254
Target Start/End: Complemental strand, 10115607 - 10115366
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttttaaaata--agcaaattccatca 111  Q
    ||||||||||||||||| ||||||||||  ||||||| ||||||||||||||||||||||||||||| || | |||| |||| |  ||||||||||||||    
T  10115607 cgcacacacgttgtatgttgatttaccgtcttagatgcatgcttagggaacgcgatacttagaaaaaaatacattttcaaaaaactagcaaattccatca 10115508  T
Q  112 gttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttag 211  Q
     |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  10115507 cttgaaaattttt-cctaataaaccttggagtcaaaactccattgaattttccctttattttcttaagcaaaactcaaatgaactctaatttcaacttag 10115409  T
Q  212 accttttttaataattgaaccaaccattcaccattttcttctc 254  Q
    || ||||||||||||||||||||||||||||||||||||||||    
T  10115408 actttttttaataattgaaccaaccattcaccattttcttctc 10115366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 254
Target Start/End: Original strand, 17260195 - 17260436
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttttaaaata-agcaaattccatcag 112  Q
    ||||||||||||||||| ||||||||||  ||||||| ||||||||||| |||| |||||||||||| || | |||| ||||   ||||||||||||||     
T  17260195 cgcacacacgttgtatgttgatttaccgtcttagatgcatgcttagggagcgcgctacttagaaaaa-atacattttcaaaaactagcaaattccatcac 17260293  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    ||||||||||   ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17260294 ttgaaaatttcc-cctaataaaccttggagtcaaaactccattgaattttccctttattttcttaagcaaaactcaaatgaactctaattccaacttaga 17260392  T
Q  213 cctttttt--aataattgaaccaaccattcaccattttcttctc 254  Q
    | ||||||  ||||||||||||||||||||||||||||||||||    
T  17260393 cttttttttcaataattgaaccaaccattcaccattttcttctc 17260436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 248
Target Start/End: Complemental strand, 21693146 - 21692913
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcag 112  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||||||||||||||||||||||   ||||  ||||||||||||||||||||     
T  21693146 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatatcaattttccaaaataagcaaattccatcac 21693051  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    |||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||   ||||||||||||||| |||||||||||||||    
T  21693050 ttgaaa-ttttttccaaacaaaccttggagtcaaaactccattgaattttccctttattttcttaa-tcaaactcaaatgaactataattccaacttaga 21692953  T
Q  213 ccttttt----taataattgaaccaaccattcaccatttt 248  Q
    |||||||    |||||||||||||||| ||||||||||||    
T  21692952 ccttttttttataataattgaaccaactattcaccatttt 21692913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 14 - 248
Target Start/End: Complemental strand, 21707928 - 21707695
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttt-taaaataagcaaattccatcag 112  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||||||||||||||||||||||   ||||  ||||||||||||||||||||     
T  21707928 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatatcaattttccaaaataagcaaattccatcac 21707833  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    ||| || |||||| | || ||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  21707832 ttg-aattttttttcaaacaaaccttggagtcaaaactccattgaattttccctttattttcttaa-tcaaactcaaatgaactctaattccaacttaga 21707735  T
Q  213 ccttttt----taataattgaaccaaccattcaccatttt 248  Q
    |||||||    |||||||||||||||| ||||||||||||    
T  21707734 ccttttttttataataattgaaccaactattcaccatttt 21707695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 14 - 219
Target Start/End: Original strand, 18085747 - 18085950
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttt-taaaataagcaaattccatcag 112  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||   ||||  |||||||| |||||||||||     
T  18085747 cgcacacaggttgtatgttgatttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatatcaattttccaaaataagtaaattccatcac 18085846  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    ||||||   ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  18085847 ttgaaa--cttttcttaataaaccttggagtcaaaactccattgaattttccctttattttcttaa-tcaaactcaaatgaactctaattccaacttaga 18085943  T
Q  213 ccttttt 219  Q
    |||||||    
T  18085944 ccttttt 18085950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 254
Target Start/End: Original strand, 20831682 - 20831818
Alignment:
Q  120 ttttttcctaataaaccttggagtcaaaaatccattgaat-tttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt 218  Q
    |||||||| || ||||||||||||||||| |||||||||| ||| |||||||||||||||  ||| | ||||||||  |||||||| ||||| || ||||    
T  20831682 ttttttccaaacaaaccttggagtcaaaactccattgaatcttttcctttattttcttaaccaaatc-caaatgaatcctaattcctacttaaacttttt 20831780  T
Q  219 t--taataattgaaccaaccattcaccattttcttctc 254  Q
    |  |||||||||||||||||||||||||||||||||||    
T  20831781 taataataattgaaccaaccattcaccattttcttctc 20831818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 12651125 - 12651254
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| ||||||||||||||| | |||  ||||||||  |||||||| |||||||| |||||    
T  12651125 tttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaa-acaaatccaaatgaatcctaattcctacttagactttttt 12651223  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||||||||||    
T  12651224 aataacaattgaaccaaccattcaccatttt 12651254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 12666046 - 12666175
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| ||||||||||||||| | |||  ||||||||  |||||||| |||||||| |||||    
T  12666046 tttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaa-acaaatccaaatgaatcctaattcctacttagactttttt 12666144  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||||||||||    
T  12666145 aataacaattgaaccaaccattcaccatttt 12666175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 248
Target Start/End: Complemental strand, 28269402 - 28269273
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| ||||||||||||||| | |||  ||||||||  |||||||| |||||||| |||||    
T  28269402 tttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaa-acaaatccaaatgaatcctaattcctacttagactttttt 28269304  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||||||||||    
T  28269303 aataacaattgaaccaaccattcaccatttt 28269273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 121 - 254
Target Start/End: Complemental strand, 34263502 - 34263367
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattttcc-ctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| |||||||||||||   ||||||||||||||  ||| | |||||||   |||||||| |||||||| |||||    
T  34263502 tttttccaaacaaaccttggagtcaaaactccattgaatttttttctttattttcttaaacaaatc-caaatgactcctaattcctacttagactttttt 34263404  T
Q  220 --taataattgaaccaaccattcaccattttcttctc 254  Q
      ||| |||||||||||||||||||||||||||||||    
T  34263403 aataacaattgaaccaaccattcaccattttcttctc 34263367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 121 - 254
Target Start/End: Complemental strand, 34306301 - 34306166
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattttcc-ctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| |||||||||||||   ||||||||||||||  ||| | |||||||   |||||||| |||||||| |||||    
T  34306301 tttttccaaacaaaccttggagtcaaaactccattgaatttttttctttattttcttaaacaaatc-caaatgactcctaattcctacttagactttttt 34306203  T
Q  220 --taataattgaaccaaccattcaccattttcttctc 254  Q
      ||| |||||||||||||||||||||||||||||||    
T  34306202 aataacaattgaaccaaccattcaccattttcttctc 34306166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 242
Target Start/End: Complemental strand, 19446252 - 19446122
Alignment:
Q  117 aaattttttc-ctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac-- 213  Q
    |||||||||| |||||||||||||||||||| | ||||||| |||||||||||||||||||||  ||||||  ||||||   ||||| | ||||||||      
T  19446252 aaattttttctctaataaaccttggagtcaacactccattgtattttccctttattttcttaatcaaaacttcaatgaatcttaatttctacttagacac 19446153  T
Q  214 -cttt-tttaataattgaaccaaccattcac 242  Q
     |||| ||||||||| |||||||||||||||    
T  19446152 tctttctttaataatcgaaccaaccattcac 19446122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 242
Target Start/End: Complemental strand, 19461061 - 19460931
Alignment:
Q  117 aaattttttc-ctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac-- 213  Q
    |||||||||| |||||||||||||||||||| | ||||||| |||||||||||||||||||||  ||||||  ||||||   |||||   ||||||||      
T  19461061 aaattttttctctaataaaccttggagtcaacactccattgtattttccctttattttcttaatcaaaacttcaatgaatcttaatttttacttagacac 19460962  T
Q  214 -cttt-tttaataattgaaccaaccattcac 242  Q
     |||| ||||||||| |||||||||||||||    
T  19460961 tctttctttaataatcgaaccaaccattcac 19460931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 251
Target Start/End: Original strand, 27399658 - 27399785
Alignment:
Q  127 ctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac---cttt-tttaa 222  Q
    |||||||||||||||||||| | ||||||| ||||| |||||||||||||||  ||||||  ||||||   ||||| | ||||||||   |||| |||||    
T  27399658 ctaataaaccttggagtcaacactccattgtatttt-cctttattttcttaatcaaaacttcaatgaatcttaatttctacttagacactctttctttaa 27399756  T
Q  223 taattgaaccaaccattcaccattttctt 251  Q
    |||||||||||||||||||| ||| ||||    
T  27399757 taattgaaccaaccattcactattgtctt 27399785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 242
Target Start/End: Complemental strand, 19556501 - 19556383
Alignment:
Q  127 ctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac---cttt-tttaa 222  Q
    |||||||||||||||||||| | ||||||| ||||| |||||||||||||||  ||||||  ||||||   ||||| | ||||||||   |||| |||||    
T  19556501 ctaataaaccttggagtcaacactccattgtatttt-cctttattttcttaatcaaaacttcaatgaatcttaatttctacttagacactctttctttaa 19556403  T
Q  223 taattgaaccaaccattcac 242  Q
    ||||||||||||||||||||    
T  19556402 taattgaaccaaccattcac 19556383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 248
Target Start/End: Original strand, 28877781 - 28877915
Alignment:
Q  117 aaattttttcctaataaaccttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacct 215  Q
    ||||||||| | || ||| ||||||||||||| |||||||||||| | | ||||||||||||| | |||  ||||||||  |||||| | |||||||| |    
T  28877781 aaatttttttcaaacaaatcttggagtcaaaactccattgaatttcttcttttattttcttaa-acaaatccaaatgaatcctaatttctacttagactt 28877879  T
Q  216 tttt---taataattgaaccaaccattcaccatttt 248  Q
    ||||   ||| |||||||||||||||||||||||||    
T  28877880 ttttaaataacaattgaaccaaccattcaccatttt 28877915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 248
Target Start/End: Original strand, 28892991 - 28893125
Alignment:
Q  117 aaattttttcctaataaaccttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacct 215  Q
    ||||||||| | || ||| ||||||||||||| |||||||||||| | | ||||||||||||| | |||  ||||||||  |||||| | |||||||| |    
T  28892991 aaatttttttcaaacaaatcttggagtcaaaactccattgaatttcttcttttattttcttaa-acaaatccaaatgaatcctaatttctacttagactt 28893089  T
Q  216 tttt---taataattgaaccaaccattcaccatttt 248  Q
    ||||   ||| |||||||||||||||||||||||||    
T  28893090 ttttaaataacaattgaaccaaccattcaccatttt 28893125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 254
Target Start/End: Original strand, 39757568 - 39757703
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| |||||| ||||||||  ||| | |||| |||  ||||| || |||||||| |||||    
T  39757568 tttttccaaacaaaccttggagtcaaaactccattgaattttttcctttactttcttaatcaaatc-caaacgaatcctaatccctacttagactttttt 39757666  T
Q  220 --taataattgaaccaaccattcaccattttcttctc 254  Q
      ||| ||||| |||||||||||||||||| ||||||    
T  39757667 aataacaattggaccaaccattcaccatttccttctc 39757703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 251
Target Start/End: Original strand, 27388597 - 27388724
Alignment:
Q  127 ctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac---cttt-tttaa 222  Q
    |||||||||||||||||||| | ||||||| ||||| |||||||||||||||  ||||||  ||||||   ||||| | | ||||||   |||| |||||    
T  27388597 ctaataaaccttggagtcaacactccattgtatttt-cctttattttcttaatcaaaacttcaatgaatcttaatttctatttagacactctttctttaa 27388695  T
Q  223 taattgaaccaaccattcaccattttctt 251  Q
    |||||||||||||||||||| ||| ||||    
T  27388696 taattgaaccaaccattcactattgtctt 27388724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 242
Target Start/End: Original strand, 22700172 - 22700293
Alignment:
Q  123 tttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt---- 218  Q
    |||||||||||||||||||||||||| || |||  ||||| |||||||||||||||   ||| |||||||||   ||||||| |||||||| ||||        
T  22700172 tttcctaataaaccttggagtcaaaactcaattctatttt-cctttattttcttaa-tcaaattcaaatgaatcttaattcctacttagacattttttcg 22700269  T
Q  219 ttaataattgaaccaaccattcac 242  Q
    ||||||||| ||||||| ||||||    
T  22700270 ttaataattaaaccaacaattcac 22700293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 19556609 - 19556548
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaa 80  Q
    |||||||||||||||||    |||||||||| ||||||||| ||||| ||||| |||||||||||||    
T  19556609 cgcacacacgttgtatg----tttaccgctt-agatgtatgtttaggaaacgcaatacttagaaaaa 19556548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 27388489 - 27388550
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaa 80  Q
    |||||||||||||||||    |||||||||| ||||||||| ||||| ||||| |||||||||||||    
T  27388489 cgcacacacgttgtatg----tttaccgctt-agatgtatgtttaggaaacgcaatacttagaaaaa 27388550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 27399550 - 27399611
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaa 80  Q
    |||||||||||||||||    |||||||||| ||||||||| ||||| ||||| |||||||||||||    
T  27399550 cgcacacacgttgtatg----tttaccgctt-agatgtatgtttaggaaacgcaatacttagaaaaa 27399611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 161; Significance: 6e-86; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 14 - 248
Target Start/End: Complemental strand, 28166135 - 28165893
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattc--cttttt--aaaataagcaaattccat 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||  ||||||||||||||||||    
T  28166135 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcttcttttttaaaaataagcaaattccat 28166036  T
Q  110 cagttgaaa-attttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactc-aaatgaactctaattccaac 207  Q
    || ||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  28166035 cacttgaaattttttttcctaataaaccttggagtcaaaactccattgaattttccctttattttcttaagagaaactcaaaatgaactttaattccaac 28165936  T
Q  208 ttagac-ctttt-ttaataattgaaccaaccattcaccatttt 248  Q
     ||||| ||||| ||||||||||||||||||| ||||||||||    
T  28165935 atagactcttttcttaataattgaaccaaccactcaccatttt 28165893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 14 - 254
Target Start/End: Complemental strand, 15364150 - 15363909
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcag 112  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||||||||||||||||||||||   ||||  |||||||| |||||||||||     
T  15364150 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatatcaattttccaaaataagtaaattccatcac 15364055  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    |||||||| |||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||   |||||||||||||||||||||||||||||||    
T  15364054 ttgaaaatcttttccaaataaaccttggagtcaaaactccattgaatttttcctttattttcttaa-tcaaactcaaatgaactctaattccaacttaga 15363956  T
Q  213 ccttttt-----taataattgaaccaaccattcaccattttcttctc 254  Q
    || ||||     |||||||||||||||||| ||||||||||||||||    
T  15363955 ccctttttttagtaataattgaaccaaccactcaccattttcttctc 15363909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 14 - 248
Target Start/End: Original strand, 17787796 - 17788028
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttttaaaataagcaaattccatcagt 113  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||    |||||||||||||||||| |    
T  17787796 cgcacacacgttgtatgatgatttactgctttagatgtatgcttagggaacgcgatacttaggaaaatattctttt----aataagcaaattccatcact 17787891  T
Q  114 tgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac 213  Q
    ||||||| ||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||  ||||||  ||||||   ||||||||||||||||    
T  17787892 tgaaaatcttttcctaataaaccttggagtcaaaactccattgtatttt-cctttattttcttaatcaaaacttcaatgaatcttaattccaacttagac 17787990  T
Q  214 -cttt--tttaataattgaaccaaccattcaccatttt 248  Q
     ||||  |||||||||||||||||||| ||||||||||    
T  17787991 tcttttctttaataattgaaccaaccactcaccatttt 17788028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 14 - 248
Target Start/End: Original strand, 19089317 - 19089549
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttttaaaataagcaaattccatcagt 113  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||    |||||||||||||||||| |    
T  19089317 cgcacacacgttgtatgatgatttactgctttagatgtatgcttagggaacgcgatacttaggaaaatattctttt----aataagcaaattccatcact 19089412  T
Q  114 tgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac 213  Q
    ||||||| ||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||  ||||||  ||||||   ||||||||||||||||    
T  19089413 tgaaaatcttttcctaataaaccttggagtcaaaactccattgtatttt-cctttattttcttaatcaaaacttcaatgaatcttaattccaacttagac 19089511  T
Q  214 -cttt--tttaataattgaaccaaccattcaccatttt 248  Q
     ||||  |||||||||||||||||||| ||||||||||    
T  19089512 tcttttctttaataattgaaccaaccactcaccatttt 19089549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 14 - 254
Target Start/End: Complemental strand, 14141825 - 14141583
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt----aaaataagcaaattccat 109  Q
    |||||||||||||||||    |||||||||||||||||||| ||||| ||||||||||||||||||||||   ||||     |||||| | |||||||||    
T  14141825 cgcacacacgttgtatg----tttaccgctttagatgtatgtttaggaaacgcgatacttagaaaaatatcaattttccaaaaaaataggtaaattccat 14141730  T
Q  110 cagttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactt 209  Q
    || |||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||| |||||||    
T  14141729 cacttgaaatttttttccaaataaaccttggagtcaaaactccattgaattttccctttattttcttaa-tcaaactcaaatgaactctaatcccaactt 14141631  T
Q  210 agaccttttt---taataattgaaccaaccattcaccattttcttctc 254  Q
    ||||||||||   |||||||||||||| ||||||||||||||||||||    
T  14141630 agaccttttttaataataattgaaccatccattcaccattttcttctc 14141583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 14 - 248
Target Start/End: Original strand, 18525835 - 18526070
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt---aaaataagcaaattccatc 110  Q
    |||||||||||||||||    ||||||||||||||||||||| |||| ||||||||||||||||||||||   ||||    |||| ||||||||||||||    
T  18525835 cgcacacacgttgtatg----tttaccgctttagatgtatgcctaggaaacgcgatacttagaaaaatatcaattttccaaaaaacaagcaaattccatc 18525930  T
Q  111 agttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactta 210  Q
    | ||||||| |||| || |||||||||||||||||||| |||||||||||||| ||||||||||||||   |||||||||||||||||||||||||||||    
T  18525931 acttgaaaaatttt-ccaaataaaccttggagtcaaaactccattgaattttctctttattttcttaa-tcaaactcaaatgaactctaattccaactta 18526028  T
Q  211 gaccttttt----taataattgaaccaaccattcaccatttt 248  Q
    |||| ||||    |||||||||||||||| ||||||||||||    
T  18526029 gacccttttttaataataattgaaccaactattcaccatttt 18526070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 14 - 248
Target Start/End: Complemental strand, 23011897 - 23011663
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt---aaaataagcaaattccatc 110  Q
    |||||||||||||||||    ||||||||||||||||||||| |||| ||||||||||||||||||||||   ||||    |||| ||||||||||||||    
T  23011897 cgcacacacgttgtatg----tttaccgctttagatgtatgcctaggaaacgcgatacttagaaaaatatcaattttccaaaaaacaagcaaattccatc 23011802  T
Q  111 agttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactta 210  Q
    | |||||||||||| || |||||||||||||||||||  |||||||||||||| ||||||||||||||  ||| ||||||||||||||||||||||||||    
T  23011801 acttgaaaattttt-ccaaataaaccttggagtcaaac-tccattgaattttctctttattttcttaatcaaa-ctcaaatgaactctaattccaactta 23011705  T
Q  211 gaccttttt----taataattgaaccaaccattcaccatttt 248  Q
    |||||||||    |||||||||||||||| ||||||||||||    
T  23011704 gacctttttttaataataattgaaccaactattcaccatttt 23011663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 35 - 248
Target Start/End: Complemental strand, 19627896 - 19627679
Alignment:
Q  35 tttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt---aaaataagcaaattccatcagttgaaaattttttcctaat 131  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||   ||||    |||||| | ||||||||||| |||||  |||||||| |||    
T  19627896 tttaccgctttagatgtatgtttaggaaacgcgatacttagaaaaatatcaattttccaaaaaataggtaaattccatcacttgaattttttttccaaat 19627797  T
Q  132 aaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt--taataattga 229  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||||   |||||||||| ||||||||||||||||||||| |||||  ||||||||||    
T  19627796 aaaccttggagttaaaactccattgaattttccttttattttcttaa-tcaaactcaaattaactctaattccaacttagacttttttaataataattga 19627698  T
Q  230 accaaccattcaccatttt 248  Q
    |||||| ||||||||||||    
T  19627697 accaactattcaccatttt 19627679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 31 - 254
Target Start/End: Complemental strand, 11647073 - 11646848
Alignment:
Q  31 atgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcagttgaaaattttttccta 129  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||    ||||  ||||||| |||||||||||| ||||||| |||| || |    
T  11647073 atgatttgccgctttagatgtatgcttaggaaacgcgatacttagaaaaataccaattttccaaaataaacaaattccatcacttgaaaactttt-ccaa 11646975  T
Q  130 ataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactct-aattccaacttagaccttttt--taataat 226  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||  ||| | |||||||||||| |||| | ||||||||||||||  ||| |||    
T  11646974 ataaaccttggagtcaaaactccattgaattttctctttattttcttaatcaaatc-caaatgaactctaaatttccacttagacctttttaataacaat 11646876  T
Q  227 tgaaccaaccattcaccattttcttctc 254  Q
    ||||||||||| ||||||||||||||||    
T  11646875 tgaaccaaccactcaccattttcttctc 11646848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 248
Target Start/End: Original strand, 4654099 - 4654314
Alignment:
Q  36 ttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt----aaaataagcaaattccatcagttgaaaattttttcctaat 131  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |  |||||    |||| ||||||||||||||| |||||| |||||||| |||    
T  4654099 ttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatactaatttttttcaaaaacaagcaaattccatcacttgaaa-ttttttccaaat 4654197  T
Q  132 aaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt-------taata 224  Q
    ||||||||||||||||| ||||||||||||||      |||||||||   |||||||||||||||||||||||| |||| ||||||||       |||||    
T  4654198 aaaccttggagtcaaaactccattgaattttc------ttttcttaa-tcaaactcaaatgaactctaattccagcttacaccttttttttttaataata 4654290  T
Q  225 attgaaccaaccattcaccatttt 248  Q
    ||||||||||| ||||||||||||    
T  4654291 attgaaccaactattcaccatttt 4654314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 254
Target Start/End: Complemental strand, 15882238 - 15882100
Alignment:
Q  118 aattttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctt 216  Q
    |||||||||| || ||||||||||||||||| ||||||||| |||| |||||||||||||||  ||| | ||||||||  |||| ||| |||||||| ||    
T  15882238 aattttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaaccaaatc-caaatgaatcctaactcctacttagacttt 15882140  T
Q  217 ttt--taataattgaaccaaccattcaccattttcttctc 254  Q
    |||  ||| |||||||||||||||||||||||||||||||    
T  15882139 tttaataacaattgaaccaaccattcaccattttcttctc 15882100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 254
Target Start/End: Original strand, 18046812 - 18046948
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattttc-cctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| |||||||||||||  |||||||||||||||  ||| | ||||||||  ||||| || |||||||| |||||    
T  18046812 tttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaaacaaatc-caaatgaatcctaatccctacttagactttttt 18046910  T
Q  220 taataa---ttgaaccaaccattcaccattttcttctc 254  Q
    ||||||   |||||||||||||||||||||||||||||    
T  18046911 taataacaattgaaccaaccattcaccattttcttctc 18046948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 254
Target Start/End: Original strand, 18062875 - 18063011
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattttc-cctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| |||||||||||||  |||||||||||||||  ||| | ||||||||  ||||| || |||||||| |||||    
T  18062875 tttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaaacaaatc-caaatgaatcctaatccctacttagactttttt 18062973  T
Q  220 taataa---ttgaaccaaccattcaccattttcttctc 254  Q
    ||||||   |||||||||||||||||||||||||||||    
T  18062974 taataacaattgaaccaaccattcaccattttcttctc 18063011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 118 - 254
Target Start/End: Complemental strand, 15897417 - 15897279
Alignment:
Q  118 aattttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctt 216  Q
    |||||||||| || ||||||||||||||||| ||||||||| |||| |||||||| ||||||  ||| | ||||||||  |||| ||| |||||||| ||    
T  15897417 aattttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattgtcttaaccaaatc-caaatgaatcctaactcctacttagacttt 15897319  T
Q  217 ttt--taataattgaaccaaccattcaccattttcttctc 254  Q
    |||  ||| |||||||||||||||||||||||||||||||    
T  15897318 tttaataacaattgaaccaaccattcaccattttcttctc 15897279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 4883054 - 4883183
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| |||||||||||| | ||||||||||||||| | |||  ||||||||  |||||||| |||||||| |||||    
T  4883054 tttttccaaacaaaccttggagtcaaaactccattgaatttcttcctttattttcttaa-acaaatccaaatgaatcctaattcctacttagactttttt 4883152  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||||||||||    
T  4883153 aataacaattgaaccaaccattcaccatttt 4883183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 248
Target Start/End: Complemental strand, 8279048 - 8278919
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| |||||||||||| | ||||||||||||||| | |||  ||||||||  |||||||| |||||||| |||||    
T  8279048 tttttccaaacaaaccttggagtcaaaactccattgaatttcttcctttattttcttaa-acaaatccaaatgaatcctaattcctacttagactttttt 8278950  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||||||||||    
T  8278949 aataacaattgaaccaaccattcaccatttt 8278919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 248
Target Start/End: Complemental strand, 8307858 - 8307729
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| |||||||||||| | ||||||||||||||| | |||  ||||||||  |||||||| |||||||| |||||    
T  8307858 tttttccaaacaaaccttggagtcaaaactccattgaatttcttcctttattttcttaa-acaaatccaaatgaatcctaattcctacttagactttttt 8307760  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||||||||||    
T  8307759 aataacaattgaaccaaccattcaccatttt 8307729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 248
Target Start/End: Complemental strand, 22641505 - 22641376
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| ||||||||||||||| | |||  ||||||||  |||||||| |||||||| |||||    
T  22641505 tttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaa-acaaatccaaatgaatcctaattcctacttagactttttt 22641407  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||||||||||    
T  22641406 aataacaattgaaccaaccattcaccatttt 22641376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 178
Target Start/End: Original strand, 19704917 - 19705065
Alignment:
Q  37 taccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-----aaaataagcaaattccatcagttgaaaatttttt-cctaa 130  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| |   ||||      |||| ||||||||||||||| |||||| |||||| || ||    
T  19704917 taccgctttagatgtatgcttaggaaacgcgacacttagaaaaatgtcaattttccaaaaaaaacaagcaaattccatcacttgaaattttttttccaaa 19705016  T
Q  131 taaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaa 178  Q
    ||||||||||||| |||| ||||||||| ||||| || |||||||||||    
T  19705017 taaaccttggagttaaaactccattgaacttttctctctattttcttaa 19705065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 121 - 254
Target Start/End: Original strand, 5662779 - 5662915
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| |||||||||||| | | |||||||||||||  ||| | ||||||||  |||||| | |||||||  |||||    
T  5662779 tttttccaaacaaaccttggagtcaaaactccattgaatttcttcttttattttcttaaacaaatc-caaatgaatcctaatttctacttagattttttt 5662877  T
Q  220 taataa---ttgaaccaaccattcaccattttcttctc 254  Q
    ||||||   |||||||||||||||||||||||||||||    
T  5662878 taataacaattgaaccaaccattcaccattttcttctc 5662915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 10600807 - 10600936
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| ||||||||||||||| | |||  |||||||   |||||||| |||||||| |||||    
T  10600807 tttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaa-acaaatccaaatgactcctaattcctacttagactttttt 10600905  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||||||||||    
T  10600906 aataacaattgaaccaaccattcaccatttt 10600936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 18003160 - 18003289
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| | ||||||||||||| | |||  ||||||||  |||||| | |||||||| |||||    
T  18003160 tttttccaaacaaaccttggagtcaaaactccattgaattttttcttttattttcttaa-acaaatccaaatgaatcctaatttctacttagactttttt 18003258  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||||||||||    
T  18003259 aataacaattgaaccaaccattcaccatttt 18003289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 247
Target Start/End: Original strand, 8291513 - 8291641
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| |||||||||||| | | ||||||||||||| | |||  ||||||||  |||||| | |||||||| |||||    
T  8291513 tttttccaaacaaaccttggagtcaaaactccattgaatttcttcttttattttcttaa-acaaatccaaatgaatcctaatttctacttagactttttt 8291611  T
Q  220 --taataattgaaccaaccattcaccattt 247  Q
      ||| ||||||||||||||||||||||||    
T  8291612 aataacaattgaaccaaccattcaccattt 8291641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 254
Target Start/End: Original strand, 5647357 - 5647494
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| |||||||||||| | | ||||||||||||| | |||  ||||||||  |||||| | |||||||  |||||    
T  5647357 tttttccaaacaaaccttggagtcaaaactccattgaatttcttcttttattttcttaa-acaaatccaaatgaatcctaatttctacttagattttttt 5647455  T
Q  220 ----taataattgaaccaaccattcaccattttcttctc 254  Q
        ||| |||||||||||||||||||||||||||||||    
T  5647456 ttaataacaattgaaccaaccattcaccattttcttctc 5647494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 4684548 - 4684677
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||| ||||||||||||| |||||||||||| | | ||||||||||||| | |||  ||||||||  |||||| | |||||||| |||||    
T  4684548 tttttccaaacaaatcttggagtcaaaactccattgaatttcttcttttattttcttaa-acaaatccaaatgaatcctaatttctacttagactttttt 4684646  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||||||||||    
T  4684647 aataacaattgaaccaaccattcaccatttt 4684677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 248
Target Start/End: Complemental strand, 8226734 - 8226605
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||| ||||||||||||| ||||||||| |||| | ||||||||||||| | |||  |||||||   |||||||| |||||||| |||||    
T  8226734 tttttccaaacaaatcttggagtcaaaactccattgaattttttcttttattttcttaa-acaaatccaaatgactcctaattcctacttagactttttt 8226636  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||||||||||    
T  8226635 aataacaattgaaccaaccattcaccatttt 8226605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 248
Target Start/End: Complemental strand, 11261058 - 11260927
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattga---attttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttt 217  Q
    ||||||| || ||||||||||||||||| ||||||||    |||| ||||||||||||||| | |||  ||||||||  ||||| || |||||||| |||    
T  11261058 tttttccaaacaaaccttggagtcaaaactccattgatttttttttcctttattttcttaa-acaaatccaaatgaatcctaatccctacttagactttt 11260960  T
Q  218 tt--taataattgaaccaaccattcaccatttt 248  Q
    ||  ||| |||||||||||||||||||||||||    
T  11260959 ttaataacaattgaaccaaccattcaccatttt 11260927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 242
Target Start/End: Complemental strand, 10929825 - 10929704
Alignment:
Q  123 tttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt---- 218  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||   ||| |||||||||   ||||| | |||||||| ||||        
T  10929825 tttcctaataaaccttggagtcaaaactccattgtatttt-cctttattttcttaa-tcaaattcaaatgaatcttaatttctacttagacattttttcg 10929728  T
Q  219 ttaataattgaaccaaccattcac 242  Q
    ||||||||||||||||| ||||||    
T  10929727 ttaataattgaaccaacaattcac 10929704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 178
Target Start/End: Complemental strand, 15475886 - 15475832
Alignment:
Q  123 tttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaa 178  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  15475886 tttcctaataaaccttggagtcaaaactccattgtatttt-cctttattttcttaa 15475832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 178
Target Start/End: Original strand, 29942719 - 29942773
Alignment:
Q  123 tttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaa 178  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  29942719 tttcctaataaaccttggagtcaaaactccattgtatttt-cctttattttcttaa 29942773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 178
Target Start/End: Original strand, 29991873 - 29991927
Alignment:
Q  123 tttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaa 178  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  29991873 tttcctaataaaccttggagtcaaaactccattgtatttt-cctttattttcttaa 29991927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 242
Target Start/End: Complemental strand, 16614852 - 16614730
Alignment:
Q  123 tttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt---- 218  Q
    |||||||||||||||||||||||||| ||||||| ||||||| ||  |||||||||   ||| |||||||||   ||||| | |||||||| ||||        
T  16614852 tttcctaataaaccttggagtcaaaactccattgtattttcctttatttttcttaa-tcaaattcaaatgaatcttaatttctacttagacattttttcg 16614754  T
Q  219 ttaataattgaaccaaccattcac 242  Q
    ||||||||||||||||| ||||||    
T  16614753 ttaataattgaaccaacaattcac 16614730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 242
Target Start/End: Complemental strand, 16631175 - 16631053
Alignment:
Q  123 tttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt---- 218  Q
    |||||||||||||||||||||||||| ||||||| ||||||| ||  |||||||||   ||| |||||||||   ||||| | |||||||| ||||        
T  16631175 tttcctaataaaccttggagtcaaaactccattgtattttcctttatttttcttaa-tcaaattcaaatgaatcttaatttctacttagacattttttcg 16631077  T
Q  219 ttaataattgaaccaaccattcac 242  Q
    ||||||||||||||||| ||||||    
T  16631076 ttaataattgaaccaacaattcac 16631053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 242
Target Start/End: Original strand, 22052008 - 22052130
Alignment:
Q  123 tttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt---- 218  Q
    |||||||||||||||||||||||||| ||||||| ||||||| ||  |||||||||   ||| |||||||||   ||||| | |||||||| ||||        
T  22052008 tttcctaataaaccttggagtcaaaactccattgtattttcctttatttttcttaa-tcaaattcaaatgaatcttaatttctacttagacattttttcg 22052106  T
Q  219 ttaataattgaaccaaccattcac 242  Q
    ||||||||||||||||| ||||||    
T  22052107 ttaataattgaaccaacaattcac 22052130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 242
Target Start/End: Complemental strand, 36131364 - 36131249
Alignment:
Q  123 tttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttttaa 222  Q
    ||||||||||||||||  |||||||| ||||||| ||||| |||||||||||||||   ||| |||||||||   ||||| | ||||||||   ||||||    
T  36131364 tttcctaataaaccttttagtcaaaactccattgtatttt-cctttattttcttaa-tcaaattcaaatgaatcttaatttctacttagac--attttaa 36131269  T
Q  223 taattgaaccaaccattcac 242  Q
    ||||||||||||| ||||||    
T  36131268 taattgaaccaacaattcac 36131249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 178
Target Start/End: Original strand, 15371628 - 15371682
Alignment:
Q  123 tttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaa 178  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||||||||| ||||    
T  15371628 tttcctaataaaccttggagtcaaaactccattgtatttt-cctttattttattaa 15371682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 254
Target Start/End: Complemental strand, 15730685 - 15730545
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattttc-----cctttattttcttaagaaaaactcaaatgaactctaattccaacttagacct 215  Q
    ||||||| || ||||||||||||||||| |||||||| ||||      || ||||||||||||  ||| | ||||||||  ||||| || |||||||  |    
T  15730685 tttttccaaacaaaccttggagtcaaaactccattgatttttttttttcccttattttcttaaacaaatc-caaatgaatcctaatccctacttagattt 15730587  T
Q  216 tttttaataa---ttgaaccaaccattcaccattttcttctc 254  Q
    ||||||||||   ||||||||| |||||||||||||||||||    
T  15730586 tttttaataacagttgaaccaatcattcaccattttcttctc 15730545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 254
Target Start/End: Complemental strand, 15745770 - 15745630
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattttc-----cctttattttcttaagaaaaactcaaatgaactctaattccaacttagacct 215  Q
    ||||||| || ||||||||||||||||| |||||||| ||||      || ||||||||||||  ||| | ||||||||  ||||| || |||||||  |    
T  15745770 tttttccaaacaaaccttggagtcaaaactccattgatttttttttttcccttattttcttaaacaaatc-caaatgaatcctaatccctacttagattt 15745672  T
Q  216 tttttaataa---ttgaaccaaccattcaccattttcttctc 254  Q
    ||||||||||   ||||||||| |||||||||||||||||||    
T  15745671 tttttaataacaattgaaccaatcattcaccattttcttctc 15745630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 248
Target Start/End: Original strand, 1999805 - 1999939
Alignment:
Q  117 aaattttttcctaataaaccttggagtcaaaaatccatt-gaattttcccttt-attttcttaagaaaaactcaaatgaactctaattccaacttagacc 214  Q
    ||||||||| | || ||| ||||||||||||| ||| || |||||||  |||| ||||||||||  ||| | |||||||   |||||||| ||||||||     
T  1999805 aaatttttttcaaacaaatcttggagtcaaaactccctttgaattttttcttttattttcttaaacaaatc-caaatgactcctaattcctacttagact 1999903  T
Q  215 ttttt--taataattgaaccaaccattcaccatttt 248  Q
    |||||  ||| |||||||||||||||||||||||||    
T  1999904 tttttaataacaattgaaccaaccattcaccatttt 1999939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 4694632 - 4694761
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||| || |||||||||| ||||| |||||| | | |||||||| ||||  ||| | ||||||||  |||||| | |||||||| |||||    
T  4694632 tttttccaaacaaatctcggagtcaaaactccatggaatttcttcttttattttgttaaacaaatc-caaatgaatcctaatttctacttagactttttt 4694730  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||||||||||    
T  4694731 aataacaattgaaccaaccattcaccatttt 4694761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 219
Target Start/End: Original strand, 35876310 - 35876408
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| |||||||| ||| | || |||||||||||| | |||  ||||||||| |||||| | |||||||| |||||    
T  35876310 tttttccaaacaaaccttggagtcaaaactccattgattttcttcccttattttcttaa-acaaatccaaatgaaccctaatttctacttagactttttt 35876408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 219
Target Start/End: Original strand, 35891380 - 35891478
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| |||||||| ||| | || |||||||||||| | |||  ||||||||| |||||| | |||||||| |||||    
T  35891380 tttttccaaacaaaccttggagtcaaaactccattgattttcttcccttattttcttaa-acaaatccaaatgaaccctaatttctacttagactttttt 35891478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 15371529 - 15371590
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaa 80  Q
    |||||||||||||||||    |||||||||| ||||||||| ||||| ||||| |||||||||||||    
T  15371529 cgcacacacgttgtatg----tttaccgctt-agatgtatgtttaggaaacgcaatacttagaaaaa 15371590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 36131463 - 36131402
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaa 80  Q
    |||||||||||||||||    |||||||||| ||||||||| ||||| ||||| |||||||||||||    
T  36131463 cgcacacacgttgtatg----tttaccgctt-agatgtatgtttaggaaacgcaatacttagaaaaa 36131402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 14 - 254
Target Start/End: Complemental strand, 7491 - 7253
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcag 112  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||||||||||||||||||||||   ||||  ||||||||||||||||||||     
T  7491 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatatcaattttccaaaataagcaaattccatcac 7396  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    |||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  7395 ttgaaaattttt-ccaaataaaccttggagtcaaaactccattgaattttccctttattttcttaa-tcaaactcaaatgaactctaattccaacttaga 7298  T
Q  213 ccttttt---taataattgaaccaaccattcaccattttcttctc 254  Q
    |||||||   |||||||||||||||||||||||||||||||||||    
T  7297 ccttttttaataataattgaaccaaccattcaccattttcttctc 7253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 14 - 254
Target Start/End: Original strand, 77044 - 77282
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcag 112  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||||||||||||||||||||||   ||||  ||||||||||||||||||||     
T  77044 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatatcaattttccaaaataagcaaattccatcac 77139  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    |||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  77140 ttgaaaattttt-ccaaataaaccttggagtcaaaactccattgaattttccctttattttcttaa-tcaaactcaaatgaactctaattccaacttaga 77237  T
Q  213 ccttttt---taataattgaaccaaccattcaccattttcttctc 254  Q
    |||||||   |||||||||||||||||||||||||||||||||||    
T  77238 ccttttttaataataattgaaccaaccattcaccattttcttctc 77282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 14 - 248
Target Start/End: Original strand, 99209 - 99442
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcag 112  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||||| ||||||||||||||||   ||||  ||||||||||||||||||||     
T  99209 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaaacgcaatacttagaaaaatatcaattttccaaaataagcaaattccatcac 99304  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    |||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  99305 ttgaaaattttt-ccaaataaaccttggagtcaaaactccattgaattttccctttattttcttaa-tcaaactcaaatgaactctaattccaacttaga 99402  T
Q  213 ccttttt----taataattgaaccaaccattcaccatttt 248  Q
    |||||||    |||||||||||||||||||||||||||||    
T  99403 cctttttttaataataattgaaccaaccattcaccatttt 99442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 248
Target Start/End: Original strand, 180132 - 180365
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcag 112  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||||| ||||||||||||||||   ||||  |||||||| |||||||||||     
T  180132 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaaacgcaatacttagaaaaatatcaattttccaaaataagaaaattccatcac 180227  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    |||||||||||| || |||||||||||||||| ||| |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  180228 ttgaaaattttt-ccaaataaaccttggagtcgaaactccattgaattttccctttattttcttaa-tcaaactcaaatgaactctaattccaacttaga 180325  T
Q  213 ccttttt----taataattgaaccaaccattcaccatttt 248  Q
    |||||||    |||||||||||||||||||||||||||||    
T  180326 cctttttataataataattgaaccaaccattcaccatttt 180365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 2811 - 3042
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt--aaaataagcaaattccatca 111  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||||||||||||||||||||| |  |||||  |||| |||||||||||||||    
T  2811 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatactaattttttcaaaacaagcaaattccatca 2906  T
Q  112 gttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttag 211  Q
     ||||||| ||||||| |||||||||||||||||||| ||||||||||||||  |||||||||||||   ||||||||||||||||||||||||||||||    
T  2907 cttgaaaa-tttttccaaataaaccttggagtcaaaactccattgaattttctttttattttcttaa-tcaaactcaaatgaactctaattccaacttag 3004  T
Q  212 accttttt----taataattgaaccaaccattcaccat 245  Q
    ||||||||    ||||||||||||||||||||||||||    
T  3005 acctttttttaataataattgaaccaaccattcaccat 3042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 254
Target Start/End: Original strand, 23406 - 23647
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcag 112  Q
    |||||||||||||||||    | |||||||||||||||||||||||| ||||||||||||||||||||||   ||||  |||||||| |||||||||||     
T  23406 cgcacacacgttgtatg----tctaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatatcaattttccaaaataagtaaattccatcac 23501  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
    |||||||   ||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||   |||||||||||||||||||||||||||||||    
T  23502 ttgaaaaaaatttccaaataaaccttggagtcaaaactccattgaatttttcctttattttcttaa-tcaaactcaaatgaactctaattccaacttaga 23600  T
Q  213 ccttttt-----taataattgaaccaaccattcaccattttcttctc 254  Q
    || ||||     |||||||||||||||||| ||||||||||||||||    
T  23601 ccctttttttaataataattgaaccaaccactcaccattttcttctc 23647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 14 - 248
Target Start/End: Original strand, 22763 - 23002
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt---aaaataagcaaattccatc 110  Q
    ||||||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||||| |||     ||||| || || |||||||    
T  22763 cgcacacacgttgtatgttgatttaccgtcttagatgcatgcttagggaacgcgatacttagaaaaatattcatttcccaaaaaattagaaagttccatc 22862  T
Q  111 agttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactta 210  Q
    | ||||||||||||||  |||||||||||||||||||| ||||||| | ||| |||||||||||||||| |||| ||||||||||| |||||||||||||    
T  22863 acttgaaaattttttca-aataaaccttggagtcaaaactccattgcacttttcctttattttcttaagcaaaattcaaatgaactttaattccaactta 22961  T
Q  211 gac-cttt--tttaataattgaaccaaccattcaccatttt 248  Q
    ||| ||||  |||||||||||||||||||| ||||||||||    
T  22962 gactcttttctttaataattgaaccaaccactcaccatttt 23002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 14 - 248
Target Start/End: Original strand, 126034 - 126274
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttttaaaata---agcaaattccatc 110  Q
    ||||||||||||||||| ||||||||||  ||||||| |||||||||||||| ||||||||||||||||||| |||   ||| |   ||||| |||||||    
T  126034 cgcacacacgttgtatgttgatttaccgtcttagatgcatgcttagggaacgtgatacttagaaaaatattcatttcccaaaaagttagcaagttccatc 126133  T
Q  111 agttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactta 210  Q
    | |||||| |||||| | |||||||||||||||||||| ||||||| | |||||||||||||||||||| |||| ||||||||||| |||||| ||||||    
T  126134 acttgaaattttttttcaaataaaccttggagtcaaaactccattgcactttccctttattttcttaagcaaaattcaaatgaactttaattcaaactta 126233  T
Q  211 gac-cttt--tttaataattgaaccaaccattcaccatttt 248  Q
    ||| ||||  |||||||||||||||||||| ||||||||||    
T  126234 gactcttttctttaataattgaaccaaccactcaccatttt 126274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 35 - 254
Target Start/End: Complemental strand, 5709 - 5486
Alignment:
Q  35 tttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt----aaaataagcaaattccatcagttgaaaattttttcctaa 130  Q
    |||||||||||||||||||||||||| || |||||||||||||||||     ||||     ||||||||||| |||||||| |||||| |||||||  ||    
T  5709 tttaccgctttagatgtatgcttaggaaatgcgatacttagaaaaatgccaattttccaaaaaaataagcaatttccatcacttgaaatttttttca-aa 5611  T
Q  131 taaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt--taataattg 228  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||   ||| ||||||||||||||||||||||||||||||| ||  ||| |||||    
T  5610 taaaccttggagtcaaaactccattgaatttttcctttattttcttaa-tcaaattcaaatgaactctaattccaacttagaccttcttaataacaattg 5512  T
Q  229 aaccaaccattcaccattttcttctc 254  Q
    |||||||||||||||||||| |||||    
T  5511 aaccaaccattcaccatttttttctc 5486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 14 - 235
Target Start/End: Original strand, 22665 - 22886
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt---aaaataagcaaattccatc 110  Q
    |||||||||||||||||    |||||||||||||||||||||||||| |||||||||||||||||||| |   ||||    |||||||||||||||||||    
T  22665 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatgtcaattttccaaaaaataagcaaattccatc 22760  T
Q  111 agttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactta 210  Q
    | |||||||||||| || |||||||||||||||||||||||||||| ||||||  |||||||||||||  ||| ||||||||||||||||||||||||||    
T  22761 acttgaaaattttt-ccgaataaaccttggagtcaaaaatccattgcattttct-tttattttcttaatcaaa-ctcaaatgaactctaattccaactta 22857  T
Q  211 gacctttt----ttaataattgaaccaac 235  Q
    ||| ||||    |||||||||||| ||||    
T  22858 gacattttctttttaataattgaaacaac 22886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 14 - 218
Target Start/End: Complemental strand, 50179 - 49979
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt---aaaataagcaaattccatc 110  Q
    |||||||||||||||||    |||||||||||||||||||||||||| |||||||||||||||||||| |   ||||    |||||||||||||||||||    
T  50179 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaaacgcgatacttagaaaaatgtcaattttccaaaaaataagcaaattccatc 50084  T
Q  111 agttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactta 210  Q
    | |||||||||||| || |||||||||||||||||||||||||||| ||||| | |||||||||||||   |||||||||||||||||||||||||||||    
T  50083 acttgaaaattttt-ccgaataaaccttggagtcaaaaatccattgcatttt-cttttattttcttaa-tcaaactcaaatgaactctaattccaactta 49987  T
Q  211 gacctttt 218  Q
    ||| ||||    
T  49986 gacatttt 49979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 14 - 248
Target Start/End: Original strand, 17520 - 17753
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttttaaaataagcaaattccatcagt 113  Q
    |||||||||||||||||    |||||||  ||||||| ||||||||||||| |||||||||||||||||    ||   |||||||||||||||||||| |    
T  17520 cgcacacacgttgtatg----tttaccgtcttagatgcatgcttagggaacacgatacttagaaaaatacattttcaaaaaataagcaaattccatcact 17615  T
Q  114 tgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac 213  Q
    ||||||    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||    
T  17616 tgaaaaaaaattcctaataaacctt-gagtcaaaactccattgaattttccctttattttcttaagaaaaactcaaatgaatgttaaatccaacttagac 17714  T
Q  214 -cttt--tttaat-aattgaaccaaccattcaccatttt 248  Q
     ||||  |||||| |||||||||||||| ||||||||||    
T  17715 tcttttctttaataaattgaaccaaccactcaccatttt 17753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 14 - 235
Target Start/End: Original strand, 17455 - 17676
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt----aaaataagcaaattccat 109  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||||||| |||||||||||| |   ||||     ||||||| ||||||||||    
T  17455 cgcacacacgttgtatg----tttaccgctttagatgtatgcttaggaaacgcgacacttagaaaaatgtcaattttccaaaaaaataaacaaattccat 17550  T
Q  110 cagttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaactt 209  Q
    || |||||||||||| || |||||||||||||||||||| ||||||| ||||| | |||||||||||||   |||||||||| |||||||||||||||||    
T  17551 cacttgaaaattttt-ccgaataaaccttggagtcaaaactccattgcatttt-cttttattttcttaa-tcaaactcaaataaactctaattccaactt 17647  T
Q  210 agacctt---ttttaataattgaaccaac 235  Q
    |||| ||   |||||||||||||||||||    
T  17648 agacattttcttttaataattgaaccaac 17676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 206
Target Start/End: Complemental strand, 1564 - 1376
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt-aaaataagcaaattccatcag 112  Q
    ||||||||||||||||| |   ||||||  ||||||||||| ||||||||||| |||||||||||||| |   ||||  |||||||| |||||| ||||     
T  1564 cgcacacacgttgtatggt---ttaccgtcttagatgtatgtttagggaacgctatacttagaaaaatgtcaattttccaaaataagaaaattcgatcac 1468  T
Q  113 ttgaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaa 206  Q
    ||||||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||||||   ||||||||||||||| |||||||||    
T  1467 ttgaaaaatttt-ccaaataaaccttggagtcaaaactccattgaattttccctttattttcttaa-tcaaactcaaatgaactttaattccaa 1376  T

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Target: scaffold0231 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 255
Target Start/End: Complemental strand, 26319 - 26183
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattttc-cctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| |||||||||||||  |||||||||||||||  ||| | ||||||||  |||||||| |||||||| |||||    
T  26319 tttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaatcaaatc-caaatgaatcctaattcctacttagactttttt 26221  T
Q  220 --taataattgaaccaaccattcaccattttcttctca 255  Q
      ||| ||||||||||||||||||||||||||||||||    
T  26220 aataacaattgaaccaaccattcaccattttcttctca 26183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 37 - 218
Target Start/End: Original strand, 12577 - 12767
Alignment:
Q  37 taccgctttagatgtatgcttagggaacgcgatacttagaaaaatattccttttt--------aaaataagcaaattccatcagttgaaaattttttcct 128  Q
    |||||||||||||||||||||||| || |||| |||||||||||| |   ||||         |||| ||||||||||||||| |||||| ||||||||     
T  12577 taccgctttagatgtatgcttaggaaatgcgacacttagaaaaatgtcaattttccaaaaaaaaaaacaagcaaattccatcacttgaaatttttttcca 12676  T
Q  129 aataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt 218  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||||||||||  |||||   |||||||| ||| | | |||||||||||||    
T  12677 aataaaccttggagtcaaaactccattgaacttttctctttattttcttaatcaaaacctcaatgaactttaacttctacttagacctttt 12767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 254
Target Start/End: Complemental strand, 11440 - 11305
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattttc-cctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| |||||||||||||  |||||||||||||||  ||| | ||||||||  ||||| || |||||||| |||||    
T  11440 tttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaaacaaatc-caaatgaatcctaatccctacttagactttttt 11342  T
Q  220 --taataattgaaccaaccattcaccattttcttctc 254  Q
      ||| |||||||||||||||||||||||||||||||    
T  11341 aataacaattgaaccaaccattcaccattttcttctc 11305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 254
Target Start/End: Original strand, 25381 - 25519
Alignment:
Q  120 ttttttcctaataaaccttggagtcaaaaatccattgaattttc--cctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttt 217  Q
    |||||||| || ||||||||||||||||| |||||||| ||||   |||||||||||||||  ||| | ||||||||  |||||||| |||||||| |||    
T  25381 ttttttccaaacaaaccttggagtcaaaactccattgattttttttcctttattttcttaaccaaatc-caaatgaatcctaattcctacttagactttt 25479  T
Q  218 tttaataa---ttgaaccaaccattcaccattttcttctc 254  Q
    || |||||   |||||||||||||||||||||||||||||    
T  25480 ttaaataacaattgaaccaaccattcaccattttcttctc 25519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 248
Target Start/End: Complemental strand, 51664 - 51531
Alignment:
Q  117 aaattttttcctaataaaccttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacct 215  Q
    ||||||||| | || ||| ||||||||||||| |||||||||||| | | |||||||||||||  ||| | ||||||||  |||||| | |||||||| |    
T  51664 aaatttttttcaaacaaatcttggagtcaaaactccattgaatttcttcttttattttcttaaacaaatc-caaatgaatcctaatttctacttagactt 51566  T
Q  216 tttt--taataattgaaccaaccattcaccatttt 248  Q
    ||||  ||| |||||||||||||||||||||||||    
T  51565 ttttaataacaattgaaccaaccattcaccatttt 51531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 248
Target Start/End: Complemental strand, 72759 - 72630
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaa-ttttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| ||||||||||||||| | |||  ||||||||  |||||||| |||||||| |||||    
T  72759 tttttccaaacaaaccttggagtcaaaactccattgaattttttcctttattttcttaa-acaaatccaaatgaatcctaattcctacttagactttttt 72661  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||||||||||    
T  72660 aataacaattgaaccaaccattcaccatttt 72630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 242
Target Start/End: Original strand, 31313 - 31539
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttttaaaataagcaaattccatcagt 113  Q
    |||||||||||||||||    |||||||||| ||||||||| ||||| ||||| |||||||||||||||| | ||||||    ||   |||||||| | |    
T  31313 cgcacacacgttgtatg----tttaccgctt-agatgtatgtttaggaaacgcaatacttagaaaaatat-cttttttatccaaaaataattccataact 31406  T
Q  114 tgaaaattttttc-ctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttaga 212  Q
      ||  | ||||| |||||||||||||||||||| | ||||||| ||||| |||||||||||||||  ||||||| ||||||   ||||||| |||||||    
T  31407 caaatttcttttctctaataaaccttggagtcaacactccattgtatttt-cctttattttcttaatcaaaactccaatgaatcttaattcctacttaga 31505  T
Q  213 c---cttt-tttaataattgaaccaaccattcac 242  Q
    |   |||| |||||||||||||||||||||||||    
T  31506 cgctctttctttaataattgaaccaaccattcac 31539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 242
Target Start/End: Original strand, 17177 - 17295
Alignment:
Q  127 ctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac---cttt-tttaa 222  Q
    |||||||||||||||||||| | ||||||| ||||| |||||||||||||||  ||||||| ||||||   ||||||| ||||||||   |||| |||||    
T  17177 ctaataaaccttggagtcaacactccattgtatttt-cctttattttcttaatcaaaactccaatgaatcttaattcctacttagacgctctttctttaa 17275  T
Q  223 taattgaaccaaccattcac 242  Q
    ||||||||||||||||||||    
T  17276 taattgaaccaaccattcac 17295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 17069 - 17133
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatat 83  Q
    |||||||||||||||||    |||||||||| ||||||||| ||||| ||||| ||||||||||||||||    
T  17069 cgcacacacgttgtatg----tttaccgctt-agatgtatgtttaggaaacgcaatacttagaaaaatat 17133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 248
Target Start/End: Complemental strand, 20488 - 20359
Alignment:
Q  121 tttttcctaataaaccttggagtcaaaaatccattgaattt-tccctttattttcttaagaaaaactcaaatgaactctaattccaacttagaccttttt 219  Q
    ||||||| || ||| ||||||||||||| |||||||||||| | | |||||||||||||  ||| | ||||||||  |||||| | |||||||| |||||    
T  20488 tttttccaaacaaatcttggagtcaaaactccattgaatttcttcttttattttcttaaacaaatc-caaatgaatcctaatttctacttagactttttt 20390  T
Q  220 --taataattgaaccaaccattcaccatttt 248  Q
      ||| |||||||||||||||||||||||||    
T  20389 aataacaattgaaccaaccattcaccatttt 20359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 242
Target Start/End: Complemental strand, 11017 - 10896
Alignment:
Q  123 tttcctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttt---- 218  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||   ||| |||||||||   ||||| | |||||||| ||||        
T  11017 tttcctaataaaccttggagtcaaaactccattgtatttt-cctttattttcttaa-tcaaattcaaatgaatcttaatttctacttagacattttttcg 10920  T
Q  219 ttaataattgaaccaaccattcac 242  Q
    ||||||||||||||||| ||||||    
T  10919 ttaataattgaaccaacaattcac 10896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 15387 - 15236
Alignment:
Q  16 cacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaatattcctttttaaaat-aagcaaattccatcagtt 114  Q
    |||||||||||||||    ||||||| |||||||||||| |||||  ||||||||||||||||| ||||| ||||| |||  ||   |||||||||| |     
T  15387 cacacacgttgtatg----tttaccgttttagatgtatgtttaggagacgcgatacttagaaaa-tattcatttttgaaagcaaattaattccatcactc 15293  T
Q  115 gaaaattttttcctaataaaccttggagtcaaaaatccattgaattttccctttattttct 175  Q
     ||   | |||||||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  15292 aaa---tctttcctaataaaccttggagtcaaaactccattgtatttt-cctttattttct 15236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 242
Target Start/End: Original strand, 8497 - 8615
Alignment:
Q  127 ctaataaaccttggagtcaaaaatccattgaattttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagac---cttt-tttaa 222  Q
    |||||||||||||||||||| | ||||||| ||||| |||||||||||||||  ||||||  ||||||   ||||| | ||||||||   |||| |||||    
T  8497 ctaataaaccttggagtcaacactccattgtatttt-cctttattttcttaatcaaaacttcaatgaatcttaatttctacttagacactctttctttaa 8595  T
Q  223 taattgaaccaaccattcac 242  Q
    ||||||||||||||||||||    
T  8596 taattgaaccaaccattcac 8615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 8389 - 8450
Alignment:
Q  14 cgcacacacgttgtatgatgatttaccgctttagatgtatgcttagggaacgcgatacttagaaaaa 80  Q
    |||||||||||||||||    |||||||||| ||||||||| ||||| ||||| |||||||||||||    
T  8389 cgcacacacgttgtatg----tttaccgctt-agatgtatgtttaggaaacgcaatacttagaaaaa 8450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 254
Target Start/End: Complemental strand, 13379 - 13252
Alignment:
Q  132 aaaccttggagtcaaaaatccattga--attttccctttattttcttaagaaaaactcaaatgaactctaattccaacttagacctttttt-----aata 224  Q
    ||||||||||||||||| ||||||||   |||| ||||||||||||||| | |||  ||||||||  |||||||| |||||||| ||||||     || |    
T  13379 aaaccttggagtcaaaactccattgattttttttcctttattttcttaa-acaaatccaaatgaatcctaattcctacttagacttttttttaataaaca 13281  T
Q  225 attgaaccaaccattcaccattttcttctc 254  Q
    |||||||||| |||||||||||| ||||||    
T  13280 attgaaccaa-cattcaccatttccttctc 13252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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