View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7469_low_14 (Length: 286)
Name: NF7469_low_14
Description: NF7469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7469_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 50089881 - 50090034
Alignment:
| Q |
13 |
aatatctatatgtagcataaaaatatttccagagtcaatatgcaatatctatgtgatgcagctttttgttcattagttccattttccttgatgcttaaaa |
112 |
Q |
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| T |
50089881 |
aatatctatatgtagcataaaaatatttccagagtcaatatgcaatatctatgtgatgcagctttttgttcattagttccattttccttgatgcttaaaa |
50089980 |
T |
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| Q |
113 |
ttttaagatgccgatagaaagacattttttgaaattatgagaaatatgcaaagt |
166 |
Q |
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| T |
50089981 |
ttttaagatgccgatagaaagacattttttgaaattatgagtaatatgcaaagt |
50090034 |
T |
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