View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7469_low_15 (Length: 282)
Name: NF7469_low_15
Description: NF7469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7469_low_15 |
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Alignment Details
Target: chr5 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 8239348 - 8239612
Alignment:
| Q |
1 |
ttttttacccagtttgcttactaaacccttttttgacattgctttcctaaacccttaagaatatgttaacaaggtgtgaatattaggtgatgaaattgtc |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
8239348 |
ttttttacccagtttgcttactaaacccttttttgacattgctttcctaaacccttaagaatatgttaacaaggtgtgaatgttaggtgatgaaattgtc |
8239447 |
T |
|
| Q |
101 |
attagtacgtatacatcgactaataagaggcaaagtttcataagtttgagtttcttagctcctctacatcacataaccttacgcatccacccaactctat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8239448 |
attagtacgtatacatcgactaataagaggcaaagtttcataagtttgagtttcttagctcctctacatcacataaccttacgcatccacccaactctat |
8239547 |
T |
|
| Q |
201 |
gactatgtaaggtgatgttagtttatttaactgtaattgacaaggctttgagtgtaacaatagtg |
265 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
8239548 |
gactatgtaaggtgatgttagtgtatttaactgtaattgacaaggctttgagtgtaacaatagtg |
8239612 |
T |
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