View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7470_high_15 (Length: 257)

Name: NF7470_high_15
Description: NF7470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7470_high_15
NF7470_high_15
[»] scaffold0465 (1 HSPs)
scaffold0465 (6-243)||(9802-10040)
[»] scaffold0597 (1 HSPs)
scaffold0597 (6-243)||(798-1035)
[»] chr7 (41 HSPs)
chr7 (6-243)||(2029119-2029356)
chr7 (17-243)||(3049780-3050006)
chr7 (38-243)||(42056140-42056346)
chr7 (7-243)||(2190008-2190243)
chr7 (86-243)||(126613-126770)
chr7 (86-243)||(1936917-1937074)
chr7 (86-243)||(32493946-32494103)
chr7 (86-243)||(111169-111326)
chr7 (45-225)||(15516720-15516901)
chr7 (13-118)||(11580588-11580693)
chr7 (18-118)||(16212071-16212170)
chr7 (13-118)||(13036865-13036970)
chr7 (17-118)||(36052971-36053071)
chr7 (17-123)||(25124445-25124550)
chr7 (7-118)||(7293333-7293441)
chr7 (43-118)||(11516544-11516619)
chr7 (43-118)||(15441435-15441510)
chr7 (15-118)||(15709469-15709572)
chr7 (43-118)||(30262000-30262075)
chr7 (7-118)||(13321334-13321443)
chr7 (134-242)||(13352151-13352259)
chr7 (15-118)||(36024452-36024556)
chr7 (43-118)||(14113860-14113935)
chr7 (43-117)||(25292209-25292283)
chr7 (17-89)||(17817292-17817363)
chr7 (17-89)||(19049638-19049709)
chr7 (134-242)||(39291457-39291565)
chr7 (44-118)||(47480902-47480976)
chr7 (43-118)||(14423511-14423585)
chr7 (44-117)||(10000245-10000318)
chr7 (7-118)||(13758677-13758785)
chr7 (44-117)||(48622541-48622614)
chr7 (42-118)||(15927875-15927951)
chr7 (42-118)||(18979894-18979970)
chr7 (44-118)||(371417-371491)
chr7 (42-118)||(13572981-13573057)
chr7 (165-239)||(15977820-15977894)
chr7 (45-118)||(15950667-15950740)
chr7 (44-117)||(16418805-16418878)
chr7 (43-118)||(15759988-15760063)
chr7 (141-239)||(18151259-18151357)
[»] chr3 (51 HSPs)
chr3 (6-243)||(33342079-33342316)
chr3 (6-243)||(54685121-54685358)
chr3 (17-243)||(38168112-38168338)
chr3 (17-243)||(30153140-30153365)
chr3 (7-243)||(53771239-53771474)
chr3 (7-243)||(16261651-16261886)
chr3 (45-242)||(28558370-28558567)
chr3 (43-243)||(23492571-23492771)
chr3 (86-243)||(7854180-7854337)
chr3 (86-243)||(17955884-17956041)
chr3 (86-242)||(45581830-45581987)
chr3 (86-243)||(55513068-55513225)
chr3 (86-243)||(3992748-3992905)
chr3 (86-243)||(54038024-54038181)
chr3 (86-243)||(2844389-2844546)
chr3 (6-118)||(13839200-13839312)
chr3 (85-243)||(18970119-18970278)
chr3 (17-118)||(2050115-2050215)
chr3 (17-118)||(12030004-12030105)
chr3 (33-118)||(17912345-17912430)
chr3 (17-118)||(19260681-19260781)
chr3 (7-118)||(11986003-11986112)
chr3 (7-118)||(13954728-13954836)
chr3 (86-242)||(15550797-15550953)
chr3 (7-118)||(45861122-45861230)
chr3 (43-118)||(2449109-2449184)
chr3 (85-242)||(48421776-48421931)
chr3 (15-123)||(51960960-51961068)
chr3 (43-118)||(15615137-15615212)
chr3 (17-89)||(5240561-5240632)
chr3 (44-118)||(14285289-14285363)
chr3 (7-118)||(54651764-54651873)
chr3 (43-118)||(14842444-14842519)
chr3 (44-118)||(19947026-19947100)
chr3 (43-118)||(8268607-8268682)
chr3 (43-118)||(8275707-8275782)
chr3 (44-118)||(11477053-11477127)
chr3 (44-118)||(16933827-16933901)
chr3 (44-118)||(18911300-18911374)
chr3 (45-118)||(12264668-12264741)
chr3 (43-118)||(18896918-18896993)
chr3 (43-118)||(25059046-25059121)
chr3 (133-242)||(11402789-11402898)
chr3 (141-239)||(17393636-17393735)
chr3 (44-117)||(44229293-44229366)
chr3 (43-118)||(5228619-5228694)
chr3 (43-118)||(15468214-15468289)
chr3 (45-117)||(8632111-8632182)
chr3 (45-118)||(22275516-22275589)
chr3 (86-118)||(15857163-15857195)
chr3 (86-118)||(19232089-19232121)
[»] chr2 (38 HSPs)
chr2 (6-243)||(9652716-9652953)
chr2 (7-243)||(21273872-21274106)
chr2 (86-243)||(22274920-22275077)
chr2 (86-243)||(22284153-22284310)
chr2 (87-237)||(25213252-25213403)
chr2 (86-237)||(15633418-15633569)
chr2 (13-118)||(22863235-22863340)
chr2 (13-118)||(36982291-36982396)
chr2 (43-118)||(463043-463118)
chr2 (19-118)||(8891549-8891648)
chr2 (15-118)||(24341238-24341341)
chr2 (85-242)||(7321716-7321873)
chr2 (43-118)||(14906311-14906386)
chr2 (43-118)||(23820388-23820463)
chr2 (41-118)||(20015328-20015405)
chr2 (8-118)||(17396492-17396599)
chr2 (43-118)||(19689272-19689347)
chr2 (8-118)||(25265227-25265335)
chr2 (44-118)||(33128372-33128446)
chr2 (7-118)||(12641483-12641591)
chr2 (13-117)||(32466177-32466279)
chr2 (7-118)||(12635709-12635817)
chr2 (7-118)||(12728699-12728807)
chr2 (7-118)||(34824782-34824890)
chr2 (43-118)||(8944153-8944228)
chr2 (7-117)||(23774444-23774551)
chr2 (44-118)||(28031092-28031166)
chr2 (44-117)||(21142203-21142276)
chr2 (7-118)||(3798444-3798552)
chr2 (44-118)||(17204659-17204733)
chr2 (44-117)||(5888505-5888578)
chr2 (43-118)||(16935900-16935975)
chr2 (43-118)||(17006560-17006635)
chr2 (164-242)||(20279610-20279688)
chr2 (74-118)||(42177874-42177918)
chr2 (85-118)||(7507756-7507789)
chr2 (86-118)||(19794629-19794661)
chr2 (86-118)||(20627238-20627270)
[»] scaffold0234 (1 HSPs)
scaffold0234 (6-241)||(17224-17459)
[»] chr5 (33 HSPs)
chr5 (6-243)||(21650893-21651130)
chr5 (8-243)||(2032008-2032243)
chr5 (17-243)||(21205124-21205348)
chr5 (45-243)||(11342883-11343081)
chr5 (45-237)||(16105847-16106040)
chr5 (15-238)||(25005019-25005240)
chr5 (13-118)||(27182398-27182503)
chr5 (8-118)||(23981327-23981437)
chr5 (15-116)||(18530917-18531018)
chr5 (38-118)||(108680-108760)
chr5 (43-118)||(20623286-20623361)
chr5 (43-118)||(21233399-21233474)
chr5 (15-118)||(22053682-22053785)
chr5 (43-118)||(37053061-37053136)
chr5 (164-242)||(22662653-22662731)
chr5 (43-118)||(16536514-16536589)
chr5 (43-118)||(23507270-23507345)
chr5 (43-118)||(25900277-25900352)
chr5 (7-114)||(32951016-32951121)
chr5 (47-118)||(7529228-7529299)
chr5 (7-118)||(1219361-1219469)
chr5 (7-117)||(23328865-23328972)
chr5 (7-117)||(24616469-24616576)
chr5 (7-117)||(24712845-24712952)
chr5 (7-117)||(24745863-24745970)
chr5 (42-118)||(7425631-7425707)
chr5 (43-118)||(35790972-35791047)
chr5 (44-118)||(9730236-9730310)
chr5 (44-118)||(17909823-17909897)
chr5 (42-118)||(27010146-27010222)
chr5 (43-118)||(23514868-23514943)
chr5 (44-118)||(34939595-34939669)
chr5 (45-118)||(11211941-11212014)
[»] scaffold0032 (2 HSPs)
scaffold0032 (15-243)||(55779-56007)
scaffold0032 (43-189)||(108032-108179)
[»] chr8 (33 HSPs)
chr8 (17-243)||(24385584-24385809)
chr8 (8-243)||(41506631-41506866)
chr8 (86-243)||(24716762-24716919)
chr8 (86-243)||(39115473-39115630)
chr8 (86-242)||(274642-274798)
chr8 (86-242)||(641051-641207)
chr8 (86-242)||(826857-827013)
chr8 (45-242)||(21259350-21259547)
chr8 (17-118)||(43373324-43373424)
chr8 (17-118)||(24928648-24928748)
chr8 (110-242)||(17502360-17502492)
chr8 (32-118)||(16193589-16193674)
chr8 (110-242)||(23218076-23218208)
chr8 (134-242)||(4234054-4234162)
chr8 (7-118)||(22907052-22907160)
chr8 (43-118)||(5238404-5238479)
chr8 (43-118)||(24661119-24661194)
chr8 (43-118)||(43685863-43685938)
chr8 (177-243)||(22321437-22321503)
chr8 (8-117)||(7000442-7000551)
chr8 (44-118)||(21494314-21494388)
chr8 (44-118)||(22886654-22886728)
chr8 (44-118)||(3431134-3431208)
chr8 (7-118)||(16872892-16873000)
chr8 (43-118)||(17345887-17345962)
chr8 (44-118)||(2545265-2545339)
chr8 (44-118)||(13662140-13662214)
chr8 (44-118)||(13720803-13720877)
chr8 (43-118)||(22006132-22006207)
chr8 (44-118)||(16038744-16038818)
chr8 (164-242)||(18118259-18118337)
chr8 (86-118)||(16404900-16404932)
chr8 (74-118)||(16674295-16674339)
[»] scaffold0706 (1 HSPs)
scaffold0706 (17-244)||(6375-6601)
[»] scaffold0251 (1 HSPs)
scaffold0251 (7-243)||(13208-13443)
[»] chr4 (41 HSPs)
chr4 (7-243)||(15272134-15272369)
chr4 (42-243)||(14951960-14952161)
chr4 (86-243)||(5682428-5682584)
chr4 (7-188)||(15135830-15136010)
chr4 (86-243)||(25119107-25119264)
chr4 (13-118)||(13246737-13246842)
chr4 (17-118)||(122194-122294)
chr4 (15-118)||(15674938-15675041)
chr4 (15-118)||(10104099-10104202)
chr4 (110-243)||(19559557-19559690)
chr4 (7-118)||(26680517-26680625)
chr4 (43-118)||(16608970-16609045)
chr4 (15-118)||(33241011-33241114)
chr4 (8-117)||(55376417-55376525)
chr4 (15-115)||(31132628-31132728)
chr4 (43-118)||(16327797-16327872)
chr4 (14-118)||(40885386-40885491)
chr4 (134-243)||(49071885-49071994)
chr4 (44-118)||(32460561-32460635)
chr4 (43-118)||(10488879-10488954)
chr4 (44-117)||(22738577-22738650)
chr4 (43-111)||(13048092-13048160)
chr4 (7-118)||(20001030-20001138)
chr4 (7-117)||(26339327-26339434)
chr4 (85-237)||(34177542-34177691)
chr4 (44-118)||(7131940-7132014)
chr4 (44-118)||(8045272-8045346)
chr4 (48-118)||(14500074-14500144)
chr4 (42-118)||(15287118-15287194)
chr4 (42-118)||(15294227-15294303)
chr4 (44-116)||(18248527-18248599)
chr4 (42-117)||(22351937-22352012)
chr4 (43-118)||(47357958-47358032)
chr4 (44-118)||(8378493-8378567)
chr4 (44-118)||(14996445-14996519)
chr4 (74-118)||(17145562-17145606)
chr4 (48-118)||(16523146-16523216)
chr4 (44-118)||(19697236-19697310)
chr4 (44-118)||(19707821-19707895)
chr4 (178-238)||(14500208-14500268)
chr4 (86-118)||(54118168-54118200)
[»] scaffold0039 (1 HSPs)
scaffold0039 (17-242)||(12350-12574)
[»] chr6 (33 HSPs)
chr6 (7-243)||(23995121-23995356)
chr6 (17-243)||(26089933-26090159)
chr6 (44-242)||(15742078-15742275)
chr6 (86-243)||(19983192-19983349)
chr6 (86-243)||(35015057-35015214)
chr6 (44-243)||(18002353-18002553)
chr6 (86-243)||(18583515-18583672)
chr6 (87-243)||(4991271-4991427)
chr6 (13-118)||(23148303-23148408)
chr6 (13-118)||(23153754-23153859)
chr6 (8-118)||(27751742-27751852)
chr6 (88-242)||(15889607-15889762)
chr6 (85-242)||(25640455-25640611)
chr6 (110-242)||(22585470-22585602)
chr6 (110-242)||(22590301-22590433)
chr6 (110-243)||(15004831-15004963)
chr6 (7-118)||(29666181-29666290)
chr6 (43-118)||(1649978-1650053)
chr6 (15-118)||(35009281-35009384)
chr6 (44-118)||(32276617-32276691)
chr6 (44-106)||(16299844-16299906)
chr6 (44-118)||(18823241-18823315)
chr6 (44-118)||(18839096-18839170)
chr6 (42-118)||(16232199-16232275)
chr6 (7-118)||(23978076-23978184)
chr6 (43-118)||(1657618-1657693)
chr6 (43-118)||(15862789-15862864)
chr6 (43-118)||(19610325-19610400)
chr6 (42-117)||(29869649-29869724)
chr6 (44-118)||(13620669-13620743)
chr6 (42-103)||(18086696-18086757)
chr6 (43-118)||(1556312-1556387)
chr6 (14-65)||(14128502-14128552)
[»] scaffold0004 (1 HSPs)
scaffold0004 (17-243)||(193329-193545)
[»] chr1 (21 HSPs)
chr1 (45-243)||(15861285-15861483)
chr1 (86-243)||(44034871-44035028)
chr1 (86-243)||(21860209-21860366)
chr1 (13-118)||(37844301-37844406)
chr1 (13-118)||(20445987-20446092)
chr1 (13-118)||(20893478-20893583)
chr1 (163-243)||(22367216-22367296)
chr1 (13-118)||(20531751-20531856)
chr1 (13-118)||(20913335-20913439)
chr1 (86-179)||(41218667-41218760)
chr1 (32-118)||(20931650-20931736)
chr1 (43-118)||(45051726-45051801)
chr1 (43-118)||(51452809-51452884)
chr1 (7-117)||(7640775-7640882)
chr1 (43-118)||(2116558-2116633)
chr1 (7-117)||(22035755-22035862)
chr1 (7-118)||(46523695-46523803)
chr1 (42-103)||(18598848-18598908)
chr1 (86-118)||(41394527-41394559)
chr1 (45-117)||(9783919-9783990)
chr1 (42-118)||(5072259-5072335)
[»] scaffold0034 (1 HSPs)
scaffold0034 (86-243)||(80062-80219)
[»] scaffold0686 (2 HSPs)
scaffold0686 (86-243)||(5983-6140)
scaffold0686 (86-232)||(5777-5923)
[»] scaffold0303 (2 HSPs)
scaffold0303 (44-243)||(4304-4504)
scaffold0303 (163-243)||(5-85)
[»] scaffold0016 (2 HSPs)
scaffold0016 (86-241)||(162078-162233)
scaffold0016 (86-241)||(166164-166319)
[»] scaffold0184 (1 HSPs)
scaffold0184 (86-243)||(31180-31337)
[»] scaffold0078 (2 HSPs)
scaffold0078 (86-243)||(41507-41664)
scaffold0078 (7-118)||(36904-37012)
[»] scaffold0116 (2 HSPs)
scaffold0116 (86-243)||(30292-30449)
scaffold0116 (43-118)||(338-413)
[»] scaffold0132 (2 HSPs)
scaffold0132 (87-227)||(42568-42708)
scaffold0132 (15-118)||(13824-13927)
[»] scaffold0342 (1 HSPs)
scaffold0342 (86-243)||(352-508)
[»] scaffold0028 (3 HSPs)
scaffold0028 (87-237)||(130760-130911)
scaffold0028 (13-118)||(89305-89410)
scaffold0028 (13-118)||(107635-107740)
[»] scaffold0162 (3 HSPs)
scaffold0162 (6-118)||(26260-26372)
scaffold0162 (15-118)||(8021-8125)
scaffold0162 (43-118)||(12063-12138)
[»] scaffold0175 (3 HSPs)
scaffold0175 (154-243)||(15147-15236)
scaffold0175 (6-77)||(15238-15309)
scaffold0175 (43-118)||(839-914)
[»] scaffold0025 (2 HSPs)
scaffold0025 (17-118)||(146906-147006)
scaffold0025 (15-118)||(9160-9263)
[»] scaffold0011 (1 HSPs)
scaffold0011 (10-118)||(123011-123119)
[»] scaffold0498 (1 HSPs)
scaffold0498 (17-118)||(9183-9283)
[»] scaffold0018 (1 HSPs)
scaffold0018 (13-118)||(51035-51140)
[»] scaffold0001 (3 HSPs)
scaffold0001 (17-118)||(172210-172310)
scaffold0001 (17-118)||(177913-178013)
scaffold0001 (44-118)||(164829-164903)
[»] scaffold0063 (1 HSPs)
scaffold0063 (108-242)||(44036-44170)
[»] scaffold0266 (2 HSPs)
scaffold0266 (17-118)||(1430-1530)
scaffold0266 (17-118)||(3440-3540)
[»] scaffold0012 (2 HSPs)
scaffold0012 (43-118)||(247323-247398)
scaffold0012 (43-118)||(34032-34107)
[»] scaffold0009 (1 HSPs)
scaffold0009 (32-118)||(272330-272416)
[»] scaffold0302 (1 HSPs)
scaffold0302 (17-118)||(12418-12519)
[»] scaffold0106 (1 HSPs)
scaffold0106 (13-118)||(42034-42139)
[»] scaffold0058 (1 HSPs)
scaffold0058 (7-120)||(57315-57426)
[»] scaffold0008 (1 HSPs)
scaffold0008 (17-118)||(128027-128127)
[»] scaffold0160 (1 HSPs)
scaffold0160 (13-117)||(339-443)
[»] scaffold0077 (1 HSPs)
scaffold0077 (17-118)||(36766-36869)
[»] scaffold0158 (1 HSPs)
scaffold0158 (8-117)||(25532-25640)
[»] scaffold0141 (2 HSPs)
scaffold0141 (43-118)||(22857-22932)
scaffold0141 (43-118)||(27112-27187)
[»] scaffold0124 (1 HSPs)
scaffold0124 (43-118)||(1453-1528)
[»] scaffold0507 (1 HSPs)
scaffold0507 (88-242)||(1406-1557)
[»] scaffold0084 (1 HSPs)
scaffold0084 (7-118)||(55936-56045)
[»] scaffold1295 (1 HSPs)
scaffold1295 (163-242)||(305-384)
[»] scaffold0772 (1 HSPs)
scaffold0772 (43-118)||(5846-5921)
[»] scaffold0118 (1 HSPs)
scaffold0118 (44-118)||(34266-34340)
[»] scaffold0066 (2 HSPs)
scaffold0066 (43-118)||(45338-45413)
scaffold0066 (43-118)||(54724-54799)
[»] scaffold0207 (1 HSPs)
scaffold0207 (44-118)||(18026-18100)
[»] scaffold0125 (1 HSPs)
scaffold0125 (44-118)||(41965-42039)
[»] scaffold0413 (1 HSPs)
scaffold0413 (43-120)||(5947-6024)
[»] scaffold0023 (3 HSPs)
scaffold0023 (18-118)||(48903-49002)
scaffold0023 (43-118)||(153881-153956)
scaffold0023 (85-118)||(61121-61154)
[»] scaffold0467 (1 HSPs)
scaffold0467 (43-118)||(10213-10288)
[»] scaffold0079 (1 HSPs)
scaffold0079 (110-242)||(3761-3897)
[»] scaffold0335 (1 HSPs)
scaffold0335 (44-118)||(5434-5508)
[»] scaffold0173 (1 HSPs)
scaffold0173 (44-118)||(5549-5623)
[»] scaffold0029 (1 HSPs)
scaffold0029 (44-118)||(49710-49784)
[»] scaffold0215 (2 HSPs)
scaffold0215 (44-118)||(9223-9297)
scaffold0215 (44-118)||(16121-16195)
[»] scaffold0037 (1 HSPs)
scaffold0037 (44-118)||(95298-95372)
[»] scaffold0516 (1 HSPs)
scaffold0516 (44-117)||(12002-12075)
[»] scaffold0183 (1 HSPs)
scaffold0183 (42-117)||(6905-6980)
[»] scaffold0361 (1 HSPs)
scaffold0361 (44-118)||(3505-3578)
[»] scaffold0383 (1 HSPs)
scaffold0383 (45-118)||(2700-2773)
[»] scaffold0017 (1 HSPs)
scaffold0017 (44-117)||(54182-54255)
[»] scaffold0026 (1 HSPs)
scaffold0026 (42-118)||(64394-64470)
[»] scaffold0761 (1 HSPs)
scaffold0761 (43-118)||(1449-1524)
[»] scaffold1500 (1 HSPs)
scaffold1500 (44-118)||(1389-1463)
[»] scaffold0615 (1 HSPs)
scaffold0615 (44-118)||(6068-6142)
[»] scaffold0574 (1 HSPs)
scaffold0574 (44-118)||(9370-9444)
[»] scaffold0013 (1 HSPs)
scaffold0013 (42-103)||(154304-154365)
[»] scaffold0003 (1 HSPs)
scaffold0003 (44-117)||(7517-7590)
[»] scaffold0892 (1 HSPs)
scaffold0892 (44-100)||(3743-3799)
[»] scaffold0369 (1 HSPs)
scaffold0369 (43-118)||(4029-4104)
[»] scaffold0057 (1 HSPs)
scaffold0057 (191-242)||(6082-6133)
[»] scaffold0387 (1 HSPs)
scaffold0387 (44-118)||(7053-7127)
[»] scaffold0367 (1 HSPs)
scaffold0367 (84-118)||(17207-17241)
[»] scaffold0092 (2 HSPs)
scaffold0092 (45-121)||(3636-3713)
scaffold0092 (44-118)||(10623-10697)
[»] scaffold0049 (1 HSPs)
scaffold0049 (44-118)||(48504-48578)
[»] scaffold0191 (1 HSPs)
scaffold0191 (45-118)||(7332-7405)
[»] scaffold0139 (2 HSPs)
scaffold0139 (45-118)||(13935-14008)
scaffold0139 (45-118)||(20989-21062)
[»] scaffold0529 (1 HSPs)
scaffold0529 (43-115)||(3271-3343)


Alignment Details
Target: scaffold0465 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 6 - 243
Target Start/End: Original strand, 9802 - 10040
Alignment:
Q  6 agagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtct 105  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9802 agagagaagaacttgaagaattaaggattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtct 9901  T
Q  106 ttatcataatcatttagttaattctttttctcttgttctatgcat-aattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgct 204  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9902 ttatcataatcatttggttaattctttttctcttgttctatgcataaattgattatgaaaataagtgattatcatgaacccaatctttgaaattcgtgct 10001  T
Q  205 tatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10002 tatgttgtagagatatgtttgaatatgttaatttgatgt 10040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 6 - 243
Target Start/End: Original strand, 798 - 1035
Alignment:
Q  6 agagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtct 105  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  798 agagagaagaacttgaagaattaaggattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtct 897  T
Q  106 ttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgctt 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  898 ttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaacccaatctttgaaattcgtgctt 997  T
Q  206 atgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    ||||||||||| | ||||| ||||||||||||||||||    
T  998 atgttgtagaggtttgttttaatatgttaatttgatgt 1035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 6 - 243
Target Start/End: Complemental strand, 2029356 - 2029119
Alignment:
Q  6 agagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtct 105  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  2029356 agagagaagaacttgaagaattaaaaattggagtgaacttaggagctaaattgaagcctaagttggaattaatctttatctaaggtaagggggttagtct 2029257  T
Q  106 ttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgctt 205  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2029256 ttatcataatcatttagttaattttttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgctt 2029157  T
Q  206 atgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||| |||||||||||||||||||||||||||    
T  2029156 atgttgtagatatatgtttgaatatgttaatttgatgt 2029119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 17 - 243
Target Start/End: Complemental strand, 3050006 - 3049780
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  3050006 cttgaagaattaaggattggagtgaacttaagagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtttttatcataatc 3049907  T
Q  117 atttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  3049906 atttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgtttatattgtagag 3049807  T
Q  217 atatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||||||||||    
T  3049806 atatgtttgaatatgttaatttgatgt 3049780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 38 - 243
Target Start/End: Original strand, 42056140 - 42056346
Alignment:
Q  38 gtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcatttagttaattctttttctc 137  Q
    |||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42056140 gtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatttggttaattctttttctc 42056239  T
Q  138 ttg-ttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaat 236  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  42056240 ttgattctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttggatatgttaat 42056339  T
Q  237 ttgatgt 243  Q
    |||||||    
T  42056340 ttgatgt 42056346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 7 - 243
Target Start/End: Original strand, 2190008 - 2190243
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||| ||||| |||| ||| ||||| |||| |||||||| |||| ||||||||||||||||||||||||| ||||||||||||| ||||||| ||    
T  2190008 gagagaagagcttgaggaatcaag-attgg-gtgagcttaggagttaaagtgaagcctaagttgggattaatctttatctaaggtaaggcggttagtttt 2190105  T
Q  107 tatcataatcatttagttaattctttttctcttg-ttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgctt 205  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2190106 tatcataatcatttggttaattctttttctcttgattctatgcataattgattatgagaataagtgattatcatgtacccaatctttgaaattcgtgctt 2190205  T
Q  206 atgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||| |||||||||||||||||    
T  2190206 atgttgtagagatatgtttggatatgttaatttgatgt 2190243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 86 - 243
Target Start/End: Complemental strand, 126770 - 126613
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  126770 taaggtaagggggttagtttttatcataatcatttagttaattctttttctattgttctatgcataattgattatgagaataagtgattatcatgaaccc 126671  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  126670 aatctttgaaattcgtgcttatgttgcagagatatgtttgaatatgttaatttgatgt 126613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 86 - 243
Target Start/End: Original strand, 1936917 - 1937074
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1936917 taaggtaaggaggttagtttttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 1937016  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1937017 aatctttgaaattcgtgcttatgtggtagagatatgtttgaatatgttaatttgatgt 1937074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 86 - 243
Target Start/End: Original strand, 32493946 - 32494103
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32493946 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaaccc 32494045  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32494046 aatctttgaaattcgtgtttatgttgtagagatatgtttgaatatgttaatttgatgt 32494103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 86 - 243
Target Start/End: Original strand, 111169 - 111326
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  111169 taaggtaagggggttagttttcatcataatcatttagttaattctttttctcttgttctatgcataattgattatgaaaataagtgattatcatgaaccc 111268  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111269 aatatttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 111326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 45 - 225
Target Start/End: Original strand, 15516720 - 15516901
Alignment:
Q  45 taggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcatttagttaattctttttctcttg-ttc 143  Q
    |||||||| |||||||||   |||| || |||||| || || || ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  15516720 taggagctgaattgaagcaagagttagggttaatcatcttcaaatgtaagggggttagtctttatcataatcatttggttaattctttttctcttgattc 15516819  T
Q  144 tatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttg 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15516820 tatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttg 15516901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 11580588 - 11580693
Alignment:
Q  13 agaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcat 112  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  11580588 agaacttgaagaatcaaggattggagtgagcttaggagctaaattgaagcctaagttgggattaatcttaatctaaggtaaggggattagtctttatcat 11580687  T
Q  113 aatcat 118  Q
    ||||||    
T  11580688 aatcat 11580693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 16212170 - 16212071
Alignment:
Q  18 ttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatca 117  Q
    ||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16212170 ttgaagaatcaag-attggagtgagcttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatca 16212072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 13036865 - 13036970
Alignment:
Q  13 agaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcat 112  Q
    |||||||||||||| ||| |||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||    
T  13036865 agaacttgaagaatcaaggattggagtaagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtcttcaccat 13036964  T
Q  113 aatcat 118  Q
    ||||||    
T  13036965 aatcat 13036970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 36053071 - 36052971
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    |||||||||| ||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36053071 cttgaagaatcaag-attggagtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 36052973  T
Q  117 at 118  Q
    ||    
T  36052972 at 36052971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 25124550 - 25124445
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    |||||||||| ||| |||||||||| ||||||||||||| |||||||||||||  |||||||| | |||||||||||||||||||||||| |||||||||    
T  25124550 cttgaagaatcaag-attggagtgagcttaggagctaaagtgaagcctaagtttagattaatcattatctaaggtaagggggttagtcttcatcataatc 25124452  T
Q  117 atttagt 123  Q
    |||||||    
T  25124451 atttagt 25124445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 7293441 - 7293333
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| || | ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||    
T  7293441 gagagaagaacttgaagaatcca--attgg-gtaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctt 7293345  T
Q  107 tatcataatcat 118  Q
    ||||||||||||    
T  7293344 tatcataatcat 7293333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 11516619 - 11516544
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  11516619 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 11516544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 15441435 - 15441510
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  15441435 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 15441510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 15709572 - 15709469
Alignment:
Q  15 aacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataa 114  Q
    |||||||||||| ||| |||||||||| ||||||||||||| |||||||||||||| | |||||| | |||||||||||| || |||||||| |||||||    
T  15709572 aacttgaagaatcaagaattggagtgagcttaggagctaaagtgaagcctaagttgaggttaatcataatctaaggtaagaggattagtcttcatcataa 15709473  T
Q  115 tcat 118  Q
    ||||    
T  15709472 tcat 15709469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 30262000 - 30262075
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  30262000 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 30262075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 13321443 - 13321334
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||| |||||||||| ||  ||||| || | ||||||||||||| ||||||||| ||| ||||||||| | ||||||||||||||||||||||||    
T  13321443 gagagaagagcttgaagaatcaa--attggggtaagcttaggagctaaagtgaagcctaggtttggattaatcattatctaaggtaagggggttagtctt 13321346  T
Q  107 tatcataatcat 118  Q
     |||||||||||    
T  13321345 catcataatcat 13321334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 134 - 242
Target Start/End: Complemental strand, 13352259 - 13352151
Alignment:
Q  134 tctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgtt 233  Q
    |||||| |||||||||||| || ||||  ||||||||||||||  ||||||||| | |||||||||||||| ||||||||| ||||||||| | ||||||    
T  13352259 tctctttttctatgcataagtgtttatttgaataagtgattattgtgaacccaacccttgaaattcgtgctcatgttgtagtgatatgtttcagtatgtt 13352160  T
Q  234 aatttgatg 242  Q
    |||||||||    
T  13352159 aatttgatg 13352151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 36024556 - 36024452
Alignment:
Q  15 aacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaag-ggggttagtctttatcata 113  Q
    |||||||||||| ||| |||||||||| |||| |||||||| |||||||||||||| | |||||| | |||||||||||| |||||||||||| ||||||    
T  36024556 aacttgaagaatcaagaattggagtgagcttatgagctaaagtgaagcctaagttgaggttaatcataatctaaggtaaggggggttagtcttcatcata 36024457  T
Q  114 atcat 118  Q
    |||||    
T  36024456 atcat 36024452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 14113860 - 14113935
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||| ||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  14113860 cttagaagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 14113935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 117
Target Start/End: Original strand, 25292209 - 25292283
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatca 117  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||| |||||||||||||||||||||||||||    
T  25292209 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaagataagggggttagtctttatcataatca 25292283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 17817292 - 17817363
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaag 89  Q
    |||||||||| ||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  17817292 cttgaagaatcaag-attggagtgagcttacgagctaaattgaagcctaagttgggattaatcttcatctaag 17817363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 19049709 - 19049638
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaag 89  Q
    |||||||||| ||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  19049709 cttgaagaatcaag-attggagtgagcttacgagctaaattgaagcctaagttgggattaatcttcatctaag 19049638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 242
Target Start/End: Original strand, 39291457 - 39291565
Alignment:
Q  134 tctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgtt 233  Q
    |||||| |||||||||||| |  ||||  ||||||||||||||  |||||| ||  ||||||||||||||| ||||||||| ||||||||||| ||||||    
T  39291457 tctctttttctatgcataagtacttatttgaataagtgattattgtgaacctaacttttgaaattcgtgctcatgttgtagtgatatgtttgagtatgtt 39291556  T
Q  234 aatttgatg 242  Q
    |||||||||    
T  39291557 aatttgatg 39291565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 47480902 - 47480976
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||| |||| ||||||||||||| ||||||||| | |||||||||||||||||||||||| |||||||||||    
T  47480902 ttaggaggtaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcat 47480976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 14423511 - 14423585
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||| ||||||||||||||||| ||| ||  |||||||||||||||||||||||||||||| |||||||||||||    
T  14423511 cttagaagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtc-ttatcataatcat 14423585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 10000245 - 10000318
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatca 117  Q
    |||||||||||| |||||||||||||  |||||| | |||||||||||||||||||| ||||| ||||||||||    
T  10000245 ttaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggtttgtcttcatcataatca 10000318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 13758785 - 13758677
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| || | ||||||||||||||||||||   |||| || ||||||||| ||||||||||||||||||||  |    
T  13758785 gagagaagaacttgaagaatcca--attgg-gtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttat 13758689  T
Q  107 tatcataatcat 118  Q
    ||||||||||||    
T  13758688 tatcataatcat 13758677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 48622541 - 48622614
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatca 117  Q
    |||||||||||| |||||||||||||  |||||| | |||||||||||||||||||| || || ||||||||||    
T  48622541 ttaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 48622614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 15927951 - 15927875
Alignment:
Q  42 acttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||| |||||||||   |||| || ||||||||| ||||||||||||||||||||  |||||||||||||    
T  15927951 acttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 15927875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 18979894 - 18979970
Alignment:
Q  42 acttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||| |||||||||   |||| || ||||||||| ||||||||||||||||||||  |||||||||||||    
T  18979894 acttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 18979970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 371491 - 371417
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| ||||||| ||||| | ||| ||| | | |||||||||||||||||||||| |||||||||||    
T  371491 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttagtcttcatcataatcat 371417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 13573057 - 13572981
Alignment:
Q  42 acttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||| |||||||||   |||| || ||||||||| ||||||||||||||||||||  |||||| ||||||    
T  13573057 acttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcacaatcat 13572981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 15977820 - 15977894
Alignment:
Q  165 ataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttg 239  Q
    |||||||||||| ||||||  ||| |||||||||| ||||   ||||||| ||||||||||| ||||||||||||    
T  15977820 ataagtgattattatgaactaaatgtttgaaattcatgctctagttgtagtgatatgtttgagtatgttaatttg 15977894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 15950667 - 15950740
Alignment:
Q  45 taggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||| |||||||||   |||| || ||||||||| || |||||||||||||||||  |||||||||||||    
T  15950667 taggagctgaattgaagcaagagtttgggttaatcttcttcaaaggtaagggggttagttattatcataatcat 15950740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 16418878 - 16418805
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatca 117  Q
    |||||||||||| |||||| | ||||  |||||| | |||||||||||||||||||| || || ||||||||||    
T  16418878 ttaggagctaaagtgaagctttagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 16418805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 15759988 - 15760063
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| |||||||||   |||| |  ||||||||| ||||||||||||||||||||  | |||||||||||    
T  15759988 cttaggagctgaattgaagcaagagtttgtgttaatcttcttctaaggtaagggggttagttatcatcataatcat 15760063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 18151259 - 18151357
Alignment:
Q  141 ttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttg 239  Q
    |||||||||||| |  ||||  ||||||||||||||  |||||  || | |||||||||||||| ||||||||| |||||| ||   ||||||||||||    
T  18151259 ttctatgcataaattcttatttgaataagtgattattgtgaacttaaccgttgaaattcgtgctcatgttgtagtgatatgattaggtatgttaatttg 18151357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 6 - 243
Target Start/End: Complemental strand, 33342316 - 33342079
Alignment:
Q  6 agagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtct 105  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33342316 agagagaagaacttgaagaattaaggattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagagggttagtct 33342217  T
Q  106 ttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgctt 205  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  33342216 ttatcataatcatttggttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaacccaatctttgaaattcgtgcta 33342117  T
Q  206 atgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||| |||||||||||||||||||||||||||||||||    
T  33342116 atgtggtagagatatgtttgaatatgttaatttgatgt 33342079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 6 - 243
Target Start/End: Original strand, 54685121 - 54685358
Alignment:
Q  6 agagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtct 105  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||    
T  54685121 agagagaagaacttgaagaattaaggattggagtgaaattaggagctaaattgaagtctaagttgggattaatcttcatccaaggtaagtgggttagtct 54685220  T
Q  106 ttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgctt 205  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54685221 ttatgataatcatttggttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgctt 54685320  T
Q  206 atgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    ||||||||||||||||||||||||||||||||||||||    
T  54685321 atgttgtagagatatgtttgaatatgttaatttgatgt 54685358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 17 - 243
Target Start/End: Complemental strand, 38168338 - 38168112
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38168338 cttgaagaattaaggattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 38168239  T
Q  117 atttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagag 216  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  38168238 atttggttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaacccaatctttgaaattcgtacttatgttgtagaa 38168139  T
Q  217 atatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||||||||||    
T  38168138 atatgtttgaatatgttaatttgatgt 38168112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 17 - 243
Target Start/End: Complemental strand, 30153365 - 30153140
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    |||||||||| ||| ||||| |||| |||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30153365 cttgaagaatcaag-attggggtgagcttaggagctaaagagaagtctaagttgggattaatcttcatctaaggtaagggggttagtttttatcataatc 30153267  T
Q  117 atttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagag 216  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30153266 atttaattaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagag 30153167  T
Q  217 atatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||||||||||    
T  30153166 atatgtttgaatatgttaatttgatgt 30153140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 7 - 243
Target Start/End: Complemental strand, 53771474 - 53771239
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||| ||||| |||| ||| ||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  53771474 gagagaagagcttgaggaatcaag-attgg-gtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctt 53771377  T
Q  107 tatcataatcatttagttaattctttttctcttg-ttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgctt 205  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53771376 tatcataatcatttggttaattctttttctcttgattctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgctt 53771277  T
Q  206 atgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||| |||||||||||||||||    
T  53771276 atgttgtagagatatgtttggatatgttaatttgatgt 53771239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 7 - 243
Target Start/End: Complemental strand, 16261886 - 16261651
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||| ||||| |||| ||| ||||| |||| ||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  16261886 gagagaagagcttgaggaatcaag-attgg-gtgagcttaggagctaaagtgaagcctaagttggaattaatctttatctaaggtaagggggttagtctt 16261789  T
Q  107 tatcataatcatttagttaattctttttctcttg-ttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgctt 205  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16261788 tatcataatcatttggttaattctttttctcttgattctatgcgtaattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgctt 16261689  T
Q  206 atgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||| |||||||||||||||||    
T  16261688 atgttgtagagatatgtttggatatgttaatttgatgt 16261651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 45 - 242
Target Start/End: Complemental strand, 28558567 - 28558370
Alignment:
Q  45 taggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttct 144  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||     
T  28558567 taggagcaaaattgaagcctaagttgggattaatctttatctaaggtaagagggttagtttttatcataatcatttagttaattctttttctcttgttcc 28558468  T
Q  145 atgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatg 242  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  28558467 atgcataattgattatgagaataagtgattatcatgaacctaatctttgaaattcgtgcttatgtgatagagatatgtttgaatatgttaatttgatg 28558370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 43 - 243
Target Start/End: Complemental strand, 23492771 - 23492571
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgtt 142  Q
    |||||||||| |||||||||   |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23492771 cttaggagctgaattgaagcaagagtttgggttaatcttcatctaaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgtt 23492672  T
Q  143 ctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatg 242  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  23492671 ctatgcataattgattatgggaataagtgattatcatgaacccaatctttgaaattcttgcttatgttgtagagatatgtttgaatgtgttaatttgatg 23492572  T
Q  243 t 243  Q
    |    
T  23492571 t 23492571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 86 - 243
Target Start/End: Complemental strand, 7854337 - 7854180
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7854337 taaggtaagggggttagttttcatcataatcatttagttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaaccc 7854238  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7854237 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 7854180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 86 - 243
Target Start/End: Original strand, 17955884 - 17956041
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17955884 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataatcgattatgagaataagtgattatcatgaaccc 17955983  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  17955984 aatctttgaaattcgtgcttatgtggtagagatatgtctgaatatgttaatttgatgt 17956041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 86 - 242
Target Start/End: Complemental strand, 45581987 - 45581830
Alignment:
Q  86 taaggtaaggggg-ttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacc 184  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  45581987 taaggtaaggggggttagtttttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaacc 45581888  T
Q  185 caatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatg 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45581887 caatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatg 45581830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 86 - 243
Target Start/End: Complemental strand, 55513225 - 55513068
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  55513225 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctatgcataattgattatggaaataagtgattatcatgaaccc 55513126  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  55513125 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaattcgatgt 55513068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 86 - 243
Target Start/End: Complemental strand, 3992905 - 3992748
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  3992905 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtaattatcatgaactc 3992806  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3992805 aacctttgaaatccgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 3992748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 86 - 243
Target Start/End: Original strand, 54038024 - 54038181
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  54038024 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaactc 54038123  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    ||| ||||| |||||||||||| ||||||| |||||||||||||||||||||||||||    
T  54038124 aatgtttgacattcgtgcttatattgtagatatatgtttgaatatgttaatttgatgt 54038181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 86 - 243
Target Start/End: Complemental strand, 2844546 - 2844389
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||    
T  2844546 taaggtaagggggttagtttttatcataatcatttagttgattctttttctcttattctatgcataattgattatgggaataagcgattatcatgaaccc 2844447  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    ||||||||||||||||||||||||||||||  | ||||| ||||||||||||||||||    
T  2844446 aatctttgaaattcgtgcttatgttgtagatttttgttttaatatgttaatttgatgt 2844389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 118
Target Start/End: Complemental strand, 13839312 - 13839200
Alignment:
Q  6 agagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtct 105  Q
    |||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  13839312 agagagaagaacttgaagaattgaggattggagtgagcttaggagctaaattgaagcctaagtagggattactcttcatctaaggtaagggggttagtct 13839213  T
Q  106 ttatcataatcat 118  Q
    | |||||||||||    
T  13839212 tcatcataatcat 13839200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 85 - 243
Target Start/End: Complemental strand, 18970278 - 18970119
Alignment:
Q  85 ctaaggtaagggggttagtcttta-tcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaac 183  Q
    ||||||||||||||||||  || | |||||| || ||||||| ||  ||||||||| |||||||||||| |||||||  |||||||||||||| ||||||    
T  18970278 ctaaggtaagggggttagatttcaatcataaccacttagttagtttcttttctctttttctatgcataagtgattatttgaataagtgattattatgaac 18970179  T
Q  184 ccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    ||||||||||||||||||||| ||||||||| ||||||||| | ||||||||||||||||    
T  18970178 ccaatctttgaaattcgtgctcatgttgtagtgatatgtttaagtatgttaatttgatgt 18970119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 2050215 - 2050115
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    |||||||||| ||| ||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2050215 cttgaagaatcaag-attggagtgagtttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 2050117  T
Q  117 at 118  Q
    ||    
T  2050116 at 2050115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 12030004 - 12030105
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||    
T  12030004 cttgaagaactaaggattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttaatcattatcataatc 12030103  T
Q  117 at 118  Q
    ||    
T  12030104 at 12030105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 17912345 - 17912430
Alignment:
Q  33 ttggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17912345 ttggagtgagcttaggagctaaattgaagcctgaggtgggattaatctttatctaaggtaagggggttagtctttatcataatcat 17912430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 19260681 - 19260781
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    |||||||||| ||| ||||||||||  ||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19260681 cttgaagaatcaag-attggagtgagattaagagctaaattgaagtctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 19260779  T
Q  117 at 118  Q
    ||    
T  19260780 at 19260781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 11986003 - 11986112
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    |||||||||  ||||||||| ||  ||||| |||| ||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  11986003 gagagaagagtttgaagaatcaa--attggggtgagcttaggagctaaattgaagcctaagtttggattaatcattatctaaggtaagggggttagtctt 11986100  T
Q  107 tatcataatcat 118  Q
     |||||||||||    
T  11986101 catcataatcat 11986112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 13954728 - 13954836
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| |||| ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||    
T  13954728 gagagaagaacttgaagaatcca--attgg-gtgagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctt 13954824  T
Q  107 tatcataatcat 118  Q
    || |||||||||    
T  13954825 taccataatcat 13954836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 86 - 242
Target Start/End: Complemental strand, 15550953 - 15550797
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||| ||||||||||||  || |||||||||| ||||||||||  |  |||||  || ||||||||| || | ||  ||||||||||||||  |||||||    
T  15550953 taagataagggggttagaattcatcataatcacttagttaatttctactctctctttttatgcataagtgctaatttgaataagtgattattgtgaaccc 15550854  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatg 242  Q
    ||  ||||||||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  15550853 aacttttgaaattcgtgctcatgttgtagtgatatgtttgagtatgttaatttgatg 15550797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 45861230 - 45861122
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| |||| ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||    
T  45861230 gagagaagaacttgaagaatcca--attgg-gtgagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctt 45861134  T
Q  107 tatcataatcat 118  Q
    || |||||||||    
T  45861133 taccataatcat 45861122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 2449109 - 2449184
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  2449109 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 2449184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 242
Target Start/End: Complemental strand, 48421931 - 48421776
Alignment:
Q  85 ctaaggtaagggggttagtctttatcataatcatttagt-taattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaac 183  Q
    |||||||||| | |||||  || |||||||||||||||| |||||   ||||  ||||| |||| |||| || |||   ||||||||||||||  |||||    
T  48421931 ctaaggtaagagagttagaattcatcataatcatttagtgtaatt---tttcatttgttgtatgaataagtgcttaattgaataagtgattattgtgaac 48421835  T
Q  184 ccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatg 242  Q
    |||||||||||||||| |||| ||||||||| ||||||||||| |||||||||||||||    
T  48421834 ccaatctttgaaattcatgctcatgttgtagtgatatgtttgagtatgttaatttgatg 48421776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 51960960 - 51961068
Alignment:
Q  15 aacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataa 114  Q
    |||||||||||| ||| ||| | |||||  |||||| |||| ||||| ||||||| ||||||||| | |||||||||||||||||||||||| |||||||    
T  51960960 aacttgaagaatcaagaattagggtgaatctaggaggtaaagtgaagtctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataa 51961059  T
Q  115 tcatttagt 123  Q
    |||||||||    
T  51961060 tcatttagt 51961068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 15615212 - 15615137
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  |||||||||| |||||||||||||||||||||||||||||||||    
T  15615212 cttaggagctaaattgaagcctaggtttggtctaatcttcatttaaggtaagggggttagtctttatcataatcat 15615137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 5240561 - 5240632
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaag 89  Q
    |||||||||| ||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  5240561 cttgaagaatcaag-attggagtgagcttacgagctaaattgaagcctaagttgggattaatcttcatctaag 5240632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 14285363 - 14285289
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| |||||| |||||| ||||||||| | |||||||||||||||||||||||| |||||||||||    
T  14285363 ttaggagctaaagtgaagcttaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcat 14285289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 54651873 - 54651764
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||| ||||| |||| ||  ||||| |||| |||||||||| |||||||||  ||||| || |||||| |||||||||||||||||||| |||||    
T  54651873 gagagaagagcttgatgaatcaa--attggggtgagcttaggagcttaattgaagcaaaagtttgggttaatcatcatctaaggtaagggggtttgtctt 54651776  T
Q  107 tatcataatcat 118  Q
     |||||||||||    
T  54651775 catcataatcat 54651764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 14842444 - 14842519
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| |||||||||   |||| || ||||||||| |||||||||||||||||||||||||||||||||||    
T  14842444 cttaggagctgaattgaagcaagagttagggttaatcttcttctaaggtaagggggttagtctttatcataatcat 14842519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 19947100 - 19947026
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||| |||| ||||||||||||| ||||||||| | | |||||||||||||||||||||| |||||||||||    
T  19947100 ttaggagttaaagtgaagcctaagtttggattaatcataacctaaggtaagggggttagtcttcatcataatcat 19947026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 8268607 - 8268682
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||   |||| || ||||||||| ||||||||||||||||||||  |||||||||||||    
T  8268607 cttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 8268682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 8275707 - 8275782
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||   |||| || ||||||||| ||||||||||||||||||||  |||||||||||||    
T  8275707 cttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 8275782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 11477053 - 11477127
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||| |||| ||||||||||||| | ||||||| | | ||||||||||||||||||||||  ||||||||||    
T  11477053 ttaggagttaaagtgaagcctaagtttgaattaatcattacctaaggtaagggggttagtcttcttcataatcat 11477127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 16933827 - 16933901
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| ||||||  ||||| | ||| ||| | | ||||||||||||||||||||||||||||||||||    
T  16933827 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggttagtctttatcataatcat 16933901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 18911374 - 18911300
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||| |||||||||   |||| || ||||||||| ||||||||||||||||||||  |||||||||||||    
T  18911374 ttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 18911300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 12264668 - 12264741
Alignment:
Q  45 taggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||| |||||||||  | ||||||||||||| || || |||||||||||||||||  |||||||||||||    
T  12264668 taggagctgaattgaagcaaaggttgggattaatcatcttcaaaggtaagggggttagttattatcataatcat 12264741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 18896918 - 18896993
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| |||||||||   |||| || ||||||||| || |||||||||||||||||  |||||||||||||    
T  18896918 cttaggagctgaattgaagcaagagtttgggttaatcttcttccaaggtaagggggttagttattatcataatcat 18896993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 25059121 - 25059046
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| |||||||||  || || || ||||||||| || |||||||||||||||||  |||||||||||||    
T  25059121 cttaggagctgaattgaagcaaaaattagggttaatcttcttcaaaggtaagggggttagttattatcataatcat 25059046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 242
Target Start/End: Complemental strand, 11402898 - 11402789
Alignment:
Q  133 ttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgt 232  Q
    |||||| |||||||||| || || ||||  ||||||||||||||  |||||  |||  |||||||||||||| || || ||| ||||||||||| ||| |    
T  11402898 ttctctagttctatgcacaagtgcttatttgaataagtgattattgtgaacttaattgttgaaattcgtgctcatattatagtgatatgtttgagtatat 11402799  T
Q  233 taatttgatg 242  Q
     |||||||||    
T  11402798 gaatttgatg 11402789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 17393735 - 17393636
Alignment:
Q  141 ttctatgcataattgatta--tgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaattt 238  Q
    ||||||||||||||| |||  ||||| ||||||||||| ||||||  |||  ||||||||||||||   ||||||| ||||||||||  |||||||||||    
T  17393735 ttctatgcataattgcttaattgaga-taagtgattattatgaacttaattgttgaaattcgtgctctagttgtagtgatatgtttgggtatgttaattt 17393637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 44229366 - 44229293
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatca 117  Q
    ||||||| |||| |||| ||||||||  |||||| | |||||||||||||||||||| || || ||||||||||    
T  44229366 ttaggagataaagtgaaacctaagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 44229293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 5228694 - 5228619
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| ||||||| |   |||| || ||||||||| ||||||||||||||||||||  | |||||||||||    
T  5228694 cttaggagctgaattgaaacaagagtttgggttaatcttcttctaaggtaagggggttagttatcatcataatcat 5228619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 15468214 - 15468289
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| |||||||||   | || || ||||||||| || |||||||||||||||||  |||||||||||||    
T  15468214 cttaggagctgaattgaagcaagaattagggttaatcttcttcaaaggtaagggggttagttattatcataatcat 15468289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 8632182 - 8632111
Alignment:
Q  45 taggagctaaattgaagcctaagtt-gggattaatcttcatctaaggtaagggggttagtctttatcataatca 117  Q
    ||||||| ||||||||||||||| | ||||||| |||  ||||||||||||||||||||  || ||||||||||    
T  8632182 taggagcaaaattgaagcctaagctagggattactct--atctaaggtaagggggttaggattcatcataatca 8632111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 22275589 - 22275516
Alignment:
Q  45 taggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||| |||||||||  |||||  | |||||| || || |||||||||||||||||  |||||||||||||    
T  22275589 taggagctgaattgaagcaaaagttaaggttaatcatcttcaaaggtaagggggttagttattatcataatcat 22275516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 118
Target Start/End: Original strand, 15857163 - 15857195
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||| |||||||||||    
T  15857163 taaggtaagggggttagtcttcatcataatcat 15857195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 118
Target Start/End: Complemental strand, 19232121 - 19232089
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||||| |||||||    
T  19232121 taaggtaagggggttagtctttatcttaatcat 19232089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 6 - 243
Target Start/End: Original strand, 9652716 - 9652953
Alignment:
Q  6 agagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtct 105  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9652716 agagagaagaacttgaagaattaaggattggagtgaacttaggagctaaattgaaacctaagttgggattaatcttcatctaaggtaagggggttagtct 9652815  T
Q  106 ttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgctt 205  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  9652816 ttatcataatcatttggttaattctttttttcttgttctatgcataattgattatgggaataagtgattatcatgaacccaatctttgaaattcgtggtt 9652915  T
Q  206 atgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9652916 atgttgtagagatatgtttgaatatgttaatttgatgt 9652953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 7 - 243
Target Start/End: Original strand, 21273872 - 21274106
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||| ||||| |||| ||| ||||| |||| |||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  21273872 gagagaagagcttgaggaatcaag-attgg-gtgagcttatgagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggg-ttagtctt 21273968  T
Q  107 tatcataatcatttagttaattctttttctcttg-ttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgctt 205  Q
    ||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21273969 tatcataatcatttgattaattctttttctcttgattctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgctt 21274068  T
Q  206 atgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||| |||||||||||||||||    
T  21274069 atgttgtagagatatgtttggatatgttaatttgatgt 21274106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 86 - 243
Target Start/End: Complemental strand, 22275077 - 22274920
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22275077 taaggtaagggggttagcctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 22274978  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22274977 aatctttgaaattcgtgcttatgtggtagagatatgtttgaatatgttaatttgatgt 22274920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 86 - 243
Target Start/End: Complemental strand, 22284310 - 22284153
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  22284310 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcatatttgattatgagaataagtgattatcatgaactc 22284211  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  22284210 aatctttgaaattcgtgcttatgtggtagagatatgtttgaatatgttaatttaatgt 22284153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 25213403 - 25213252
Alignment:
Q  87 aaggtaagggggttagtctttatcataatcatttagttaattctttttctcttg-ttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25213403 aaggtaagggggttagtctttatcataatcatttgattaattctttttctcttgattctatgcataattgattatgagaataagtgattatcatgaaccc 25213304  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatt 237  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25213303 aatctttgaaattcgtgcttatgttgtagagatatgtttggatatgttaatt 25213252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 86 - 237
Target Start/End: Complemental strand, 15633569 - 15633418
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15633569 taaggtaaggaggttagtctttatcataatcacttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattataatgaaccc 15633470  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatt 237  Q
    |||  ||||| ||||||||  |||| | | |||| |||||| ||||||||||    
T  15633469 aattcttgaatttcgtgctcttgttttggtgataagtttgagtatgttaatt 15633418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 22863340 - 22863235
Alignment:
Q  13 agaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcat 112  Q
    |||||||||||||| ||| ||||| |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22863340 agaacttgaagaatcaaggattggggtgagcttaggagctaaattgcagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcat 22863241  T
Q  113 aatcat 118  Q
    ||||||    
T  22863240 aatcat 22863235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 36982291 - 36982396
Alignment:
Q  13 agaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcat 112  Q
    ||||||||||||| |||| |||||||||| || |||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||    
T  36982291 agaacttgaagaactaaggattggagtgagctgaggagctaaattgaagcctaagttggtattagtctttatctaaggtaagggggttagtctttatcat 36982390  T
Q  113 aatcat 118  Q
    ||||||    
T  36982391 aatcat 36982396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 463118 - 463043
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  463118 cttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 463043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 8891648 - 8891549
Alignment:
Q  19 tgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||| ||| ||| |||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  8891648 tgaacaatcaaggattggagtgagcttaggaactaaattgaagcctaagttgggattaatctttatctaaggtaaaggggttagtctttatcataatcat 8891549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 24341238 - 24341341
Alignment:
Q  15 aacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataa 114  Q
    ||||||||| || ||| |||||||||| ||||||||||||| |||||||||||||| | |||||| | |||||||||||||||||||||||| |||||||    
T  24341238 aacttgaagcatcaagaattggagtgagcttaggagctaaaatgaagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataa 24341337  T
Q  115 tcat 118  Q
    ||||    
T  24341338 tcat 24341341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 85 - 242
Target Start/End: Complemental strand, 7321873 - 7321716
Alignment:
Q  85 ctaaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacc 184  Q
    ||||||||||||||||||  || || ||||||| ||||||||||  |  |||||| | |||||||||  || ||||  |||||||||| |||  ||||||    
T  7321873 ctaaggtaagggggttagaattcattataatcacttagttaatttctactctcttttcctatgcatacgtgcttatttgaataagtgactattgtgaacc 7321774  T
Q  185 caatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatg 242  Q
    |||  ||||||||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  7321773 caacttttgaaattcgtgctcatgttgtagtgatatgtttgagtatgttaatttgatg 7321716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 14906311 - 14906386
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  14906311 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 14906386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 23820463 - 23820388
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  23820463 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 23820388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 20015405 - 20015328
Alignment:
Q  41 aacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||||| ||| ||  |||||||||||||||||||||||||||||||||||||| |||||    
T  20015405 aacttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcatgatcat 20015328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 17396492 - 17396599
Alignment:
Q  8 agagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtcttt 107  Q
    |||||||||||||||||||  |  ||||| |||| ||||||||||||||| ||||||| ||| ||  |||||||||||||||||||||||||||||||||    
T  17396492 agagaagaacttgaagaatcca--attgg-gtgagcttaggagctaaattaaagcctaggtttggtctaatcttcatctaaggtaagggggttagtcttt 17396588  T
Q  108 atcataatcat 118  Q
    | |||||||||    
T  17396589 accataatcat 17396599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 19689272 - 19689347
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  |||||||||| |||||||||||||||||||||||||||||||||    
T  19689272 cttaggagctaaattgaagcctaggtttggtctaatcttcatttaaggtaagggggttagtctttatcataatcat 19689347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 25265227 - 25265335
Alignment:
Q  8 agagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtcttt 107  Q
    |||||||| |||||||||| ||  ||||| || | ||||||||||||| ||||||||| ||| ||||||||| | |||||| |||||||||||||||||     
T  25265227 agagaagagcttgaagaatcaa--attggggtaagcttaggagctaaagtgaagcctaggtttggattaatcattatctaatgtaagggggttagtcttc 25265324  T
Q  108 atcataatcat 118  Q
    |||||||||||    
T  25265325 atcataatcat 25265335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 33128446 - 33128372
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| ||||||||||||| ||||||||| | | |||||||||||||||||||||| |||||||||||    
T  33128446 ttaggagctaaagtgaagcctaagtttggattaatcataacctaaggtaagggggttagtcttcatcataatcat 33128372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 12641483 - 12641591
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| || | ||||||||||||||||||||   |||| || ||||||||||||||||||||||||||||||  |    
T  12641483 gagagaagaacttgaagaatcca--attgg-gtaagcttaggagctaaattgaagcaagagtttgggttaatcttcatctaaggtaagggggttagttat 12641579  T
Q  107 tatcataatcat 118  Q
    ||||||||||||    
T  12641580 tatcataatcat 12641591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 32466279 - 32466177
Alignment:
Q  13 agaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcat 112  Q
    |||||||||||||  ||| ||||| |||| ||||||||||||||||||||||||||| || || ||| | ||||||||||| |||||||||||| |||||    
T  32466279 agaacttgaagaaccaagaattgg-gtgagcttaggagctaaattgaagcctaagtttgggttgatccttatctaaggtaa-ggggttagtcttcatcat 32466182  T
Q  113 aatca 117  Q
    |||||    
T  32466181 aatca 32466177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 12635709 - 12635817
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| || | ||||||||||||||||||||   |||| || ||||||||| ||||||||||||||||||||  |    
T  12635709 gagagaagaacttgaagaatcca--attgg-gtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttat 12635805  T
Q  107 tatcataatcat 118  Q
    ||||||||||||    
T  12635806 tatcataatcat 12635817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 12728807 - 12728699
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| || | ||||||||||||||||||||   |||| || ||||||||| ||||||||||||||||||||  |    
T  12728807 gagagaagaacttgaagaatcca--attgg-gtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttat 12728711  T
Q  107 tatcataatcat 118  Q
    ||||||||||||    
T  12728710 tatcataatcat 12728699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 34824890 - 34824782
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| || | ||||||||||||||||||||   |||| || ||||||||| ||||||||||||||||||||  |    
T  34824890 gagagaagaacttgaagaatcca--attgg-gtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagtgat 34824794  T
Q  107 tatcataatcat 118  Q
    ||||||||||||    
T  34824793 tatcataatcat 34824782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 8944228 - 8944153
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||   |||| || ||||||||| ||||||||||||||||||||  |||||||||||||    
T  8944228 cttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 8944153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 23774551 - 23774444
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| || | ||||||||||||||||||||   |||| || ||||||||| ||||||||||||||||||||  |    
T  23774551 gagagaagaacttgaagaatcca--attgg-gtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttat 23774455  T
Q  107 tatcataatca 117  Q
    |||||||||||    
T  23774454 tatcataatca 23774444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 28031092 - 28031166
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||| |||| ||||||||||||| | ||||||| | | |||||||||||||||||||||| |||||||||||    
T  28031092 ttaggagttaaagtgaagcctaagtttgaattaatcattacctaaggtaagggggttagtcttcatcataatcat 28031166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 21142276 - 21142203
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatca 117  Q
    |||||||||||| |||||||||||||  |||||| | |||||||||||||||||||| || || ||||||||||    
T  21142276 ttaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 21142203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 3798444 - 3798552
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| || | |||| |||||||||||||||   |||| || ||||||||| ||||||||||||||||||||  |    
T  3798444 gagagaagaacttgaagaatcca--attgg-gtaagcttatgagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttat 3798540  T
Q  107 tatcataatcat 118  Q
    ||||||||||||    
T  3798541 tatcataatcat 3798552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 17204733 - 17204659
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||| |||| ||||| ||||||| ||||||||| | | |||| ||||||||||||||||| |||||||||||    
T  17204733 ttaggagttaaagtgaagtctaagtttggattaatcataacctaaagtaagggggttagtcttcatcataatcat 17204659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 5888505 - 5888578
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatca 117  Q
    |||||||||||| |||||| ||||||  |||||| | |||||||||||||||||||| || || ||||||||||    
T  5888505 ttaggagctaaagtgaagcttaagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 5888578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 16935975 - 16935900
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| ||||||||    |||| || ||||||||| ||||||||||||||||||||  |||||||||||||    
T  16935975 cttaggagctgaattgaagaaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 16935900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 17006635 - 17006560
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| ||||||||    |||| || ||||||||| ||||||||||||||||||||  |||||||||||||    
T  17006635 cttaggagctgaattgaagaaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 17006560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 242
Target Start/End: Complemental strand, 20279688 - 20279610
Alignment:
Q  164 aataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatg 242  Q
    |||||||||||||  |||||  |||| |||||||||||||| ||||| ||||||||||||||  ||| | |||||||||    
T  20279688 aataagtgattatggtgaacttaatcgttgaaattcgtgctcatgttatagagatatgtttgggtatatgaatttgatg 20279610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 118
Target Start/End: Original strand, 42177874 - 42177918
Alignment:
Q  74 ttaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||| ||||||||||||||||||||  |||||||||||||    
T  42177874 ttaatcttcttctaaggtaagggggttagttattatcataatcat 42177918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 118
Target Start/End: Original strand, 7507756 - 7507789
Alignment:
Q  85 ctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||||||||||||| |||||||||||    
T  7507756 ctaaggtaagggggttagtcttcatcataatcat 7507789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 118
Target Start/End: Original strand, 19794629 - 19794661
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||| |||||||||||    
T  19794629 taaggtaagggggttagtcttcatcataatcat 19794661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 118
Target Start/End: Original strand, 20627238 - 20627270
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcat 118  Q
    |||||||| ||||||||||||||||||||||||    
T  20627238 taaggtaacggggttagtctttatcataatcat 20627270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 6 - 241
Target Start/End: Original strand, 17224 - 17459
Alignment:
Q  6 agagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtct 105  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  17224 agagagaagaacttgaagaattaaggattggagtgaacttaggagctaaattgaagcctaagttgggattaatctccatctaaggtaagcgggttagtct 17323  T
Q  106 ttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgctt 205  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  17324 ttatcataatcatttaggtaattctttttctcttgttctatgcataattgattatgagaataattgattatcatgaacccaatctttgaaattagtgctt 17423  T
Q  206 atgttgtagagatatgtttgaatatgttaatttgat 241  Q
    |||| |||||||||||||||||||||||||||||||    
T  17424 atgtggtagagatatgtttgaatatgttaatttgat 17459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 202; Significance: 1e-110; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 6 - 243
Target Start/End: Complemental strand, 21651130 - 21650893
Alignment:
Q  6 agagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtct 105  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |    
T  21651130 agagagaagaacttgaagaattaaggattggagtgagcttaggagctaaattgaagtctaagttgggattaatcttcatctaaggtaagggggttaatat 21651031  T
Q  106 ttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgctt 205  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21651030 ttatcataatcatttggttaattctttttctcttgttctgtgcatagttgattatgggaataagtgattatcatgaacccaatctttgaaattcgtgctt 21650931  T
Q  206 atgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21650930 atgttgtagagatatgtttgaatatgttaatttgatgt 21650893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 2032243 - 2032008
Alignment:
Q  8 agagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtcttt 107  Q
    |||| |||||||||||||| ||| ||||| |||| ||||||||||||||||||||||||||| || |||||| | ||||||||||||||||||||| ||     
T  2032243 agaggagaacttgaagaatcaagaattggggtgagcttaggagctaaattgaagcctaagtttgggttaatccttatctaaggtaagggggttagttttc 2032144  T
Q  108 atcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttat 207  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2032143 atcataatcgtttagttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaacccaatctttgaaattcgtgcttat 2032044  T
Q  208 gttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    ||||||||||||||||||||||||||||||||||||    
T  2032043 gttgtagagatatgtttgaatatgttaatttgatgt 2032008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 17 - 243
Target Start/End: Complemental strand, 21205348 - 21205124
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||    
T  21205348 cttgaagaatcaag-attggagtgagcttaggagctaaattgaagcctaagttggaattaatcttcatctaagataaggga-ttagtctttatcataatc 21205251  T
Q  117 atttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagag 216  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21205250 atttggttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagag 21205151  T
Q  217 atatgtttgaatatgttaatttgatgt 243  Q
    ||||||||| |||||||||||||||||    
T  21205150 atatgtttggatatgttaatttgatgt 21205124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 45 - 243
Target Start/End: Complemental strand, 11343081 - 11342883
Alignment:
Q  45 taggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttct 144  Q
    |||||||| |||||||||  | ||| || ||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11343081 taggagctgaattgaagcagaggttagggttaatcttcttcaaaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttct 11342982  T
Q  145 atgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11342981 atgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 11342883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 45 - 237
Target Start/End: Complemental strand, 16106040 - 16105847
Alignment:
Q  45 taggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcatttagttaattctttttctcttg-ttc 143  Q
    |||||||| |||||||||   ||||  | ||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||    
T  16106040 taggagctgaattgaagcaagagtttaggttaatcttcttctaaggtaagggggttagtctttatcataatcatttgattaattctttttctcttgattc 16105941  T
Q  144 tatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatt 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16105940 tatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttggatatgttaatt 16105847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 15 - 238
Target Start/End: Complemental strand, 25005240 - 25005019
Alignment:
Q  15 aacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataa 114  Q
    |||||||||||| ||| |||||||||||  ||||||||||| ||||||||||||| ||||||||| | |||||| ||||||||||||||||| |||||||    
T  25005240 aacttgaagaatcaagaattggagtgaatctaggagctaaagtgaagcctaagtttggattaatcattatctaaagtaagggggttagtcttcatcataa 25005141  T
Q  115 tcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtag 214  Q
    ||||||||||  |  ||||||  ||||| |||| |||| || | |   ||||||||||||||  |||||||||||||||||||||||||| |||||| ||    
T  25005140 tcatttagtt--tagtttttcaattgttgtatgaataagtgctcaattgaataagtgattattgtgaacccaatctttgaaattcgtgctcatgttgaag 25005043  T
Q  215 agatatgtttgaatatgttaattt 238  Q
     ||||||||||| | |||||||||    
T  25005042 tgatatgtttgagtgtgttaattt 25005019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 27182398 - 27182503
Alignment:
Q  13 agaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcat 112  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||    
T  27182398 agaacttgaagaatcaagaattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcatcat 27182497  T
Q  113 aatcat 118  Q
    ||||||    
T  27182498 aatcat 27182503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 23981327 - 23981437
Alignment:
Q  8 agagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtcttt 107  Q
    |||| ||| |||||||||| ||| ||||| |||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||     
T  23981327 agaggagatcttgaagaatcaagaattggggtgagcttaggagctaaattgaagcctaagtttggattaatcttcatcttaggtaagggggttagtcttc 23981426  T
Q  108 atcataatcat 118  Q
    |||| ||||||    
T  23981427 atcaaaatcat 23981437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 18530917 - 18531018
Alignment:
Q  15 aacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataa 114  Q
    |||||||||||| ||| |||||||||| ||||||||||||| |||||||||||||| | |||||| | |||||||||||||||||||||||| |||||||    
T  18530917 aacttgaagaatcaagaattggagtgagcttaggagctaaagtgaagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataa 18531016  T
Q  115 tc 116  Q
    ||    
T  18531017 tc 18531018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 108680 - 108760
Alignment:
Q  38 gtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||| |||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  108680 gtgagcttaggaggtaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtcttcatcataatcat 108760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 20623361 - 20623286
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  20623361 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 20623286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 21233399 - 21233474
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  21233399 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 21233474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 22053682 - 22053785
Alignment:
Q  15 aacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataa 114  Q
    |||||||||||| ||| |||| ||||| ||||||||||||| ||||| |||||||| | |||||| | |||||||||||||||||||||||| |||||||    
T  22053682 aacttgaagaatcaagaattgaagtgagcttaggagctaaagtgaagtctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataa 22053781  T
Q  115 tcat 118  Q
    ||||    
T  22053782 tcat 22053785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 37053136 - 37053061
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  37053136 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 37053061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 164 - 242
Target Start/End: Original strand, 22662653 - 22662731
Alignment:
Q  164 aataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatg 242  Q
    |||||||||||||  |||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||    
T  22662653 aataagtgattattgtgaacccaatctttgaaattcgtgctcatgttgtagtgatatatttgaatatgttaatttgatg 22662731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 16536589 - 16536514
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||| ||||||||||||||||||||||||||||    
T  16536589 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaagataagggggttagtctttatcataatcat 16536514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 23507345 - 23507270
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||| |||| |||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  23507345 cttaggagttaaagtgaagcataagttggaattaatctttatctaaggtaagggggttagtctttatcataatcat 23507270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 25900277 - 25900352
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||| ||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  25900277 cttaggagctaaattaaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 25900352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 114
Target Start/End: Complemental strand, 32951121 - 32951016
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||| |||||||||| ||  ||||| || | ||||||||||||||||||| ||||||| | ||||||| | || |||||||||||||||||||||    
T  32951121 gagagaagagcttgaagaatcaa--attggggtaagcttaggagctaaattgaagtctaagtttgaattaatcattatttaaggtaagggggttagtctt 32951024  T
Q  107 tatcataa 114  Q
     |||||||    
T  32951023 catcataa 32951016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 7529299 - 7529228
Alignment:
Q  47 ggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||| ||||||||||||| ||||||||| | ||||||||||||||||||||||||  ||||||||||    
T  7529299 ggagctaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcttcataatcat 7529228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 1219361 - 1219469
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| || | ||||||||||||||||||||   |||| || ||||||||| ||||||||||||||||||||  |    
T  1219361 gagagaagaacttgaagaatcca--attgg-gtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagtgat 1219457  T
Q  107 tatcataatcat 118  Q
    ||||||||||||    
T  1219458 tatcataatcat 1219469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 23328972 - 23328865
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| || | ||||||||||||||||||||   |||| || ||||||||| ||||||||||||||||||||  |    
T  23328972 gagagaagaacttgaagaatcca--attgg-gtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttat 23328876  T
Q  107 tatcataatca 117  Q
    |||||||||||    
T  23328875 tatcataatca 23328865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 24616576 - 24616469
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| || | ||||||||||||||||||||   |||| || ||||||||| ||||||||||||||||||||  |    
T  24616576 gagagaagaacttgaagaatcca--attgg-gtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttat 24616480  T
Q  107 tatcataatca 117  Q
    |||||||||||    
T  24616479 tatcataatca 24616469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 24712952 - 24712845
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| || | ||||||||||||||||||||   |||| || ||||||||| ||||||||||||||||||||  |    
T  24712952 gagagaagaacttgaagaatcca--attgg-gtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttat 24712856  T
Q  107 tatcataatca 117  Q
    |||||||||||    
T  24712855 tatcataatca 24712845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 24745970 - 24745863
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| || | ||||||||||||||||||||   |||| || ||||||||| ||||||||||||||||||||  |    
T  24745970 gagagaagaacttgaagaatcca--attgg-gtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttat 24745874  T
Q  107 tatcataatca 117  Q
    |||||||||||    
T  24745873 tatcataatca 24745863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 7425707 - 7425631
Alignment:
Q  42 acttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||| |||||||||   |||| || ||||||||| ||||||||||||||||||||  |||||||||||||    
T  7425707 acttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 7425631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 35790972 - 35791047
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| |||||||||   |||| || ||||||||| ||||||||||||||||||||  |||||||||||||    
T  35790972 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 35791047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 9730236 - 9730310
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| ||||||| ||||| | ||| ||| | | |||||||||||||||||||||| |||||||||||    
T  9730236 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttagtcttcatcataatcat 9730310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 17909897 - 17909823
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||| |||| ||||||||||||| ||||||||| | | ||||||||||||||||||| ||  ||||||||||    
T  17909897 ttaggagttaaagtgaagcctaagtttggattaatcataacctaaggtaagggggttagtgttcttcataatcat 17909823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 27010222 - 27010146
Alignment:
Q  42 acttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||| |||||||||   |||| || ||||||||| ||||||||||||||||||||  |||||| ||||||    
T  27010222 acttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcacaatcat 27010146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 23514943 - 23514868
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| |||||||||   |||| || ||||||||| ||||||||||||||||||||  | |||||||||||    
T  23514943 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttatcatcataatcat 23514868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 34939669 - 34939595
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| ||||| ||||||  | ||||||| | | ||||||||||||||||||| ||  ||||||||||    
T  34939669 ttaggagctaaagtgaagtctaagtgtgaattaatcataacctaaggtaagggggttagtgttcttcataatcat 34939595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 11211941 - 11212014
Alignment:
Q  45 taggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||| |||||||||   |||| || |||||| || || |||||||||||||||||  |||||||||||||    
T  11211941 taggagctgaattgaagcaagagttagggttaatcatcttcaaaggtaagggggttagttattatcataatcat 11212014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 201; Significance: 1e-110; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 15 - 243
Target Start/End: Complemental strand, 56007 - 55779
Alignment:
Q  15 aacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataa 114  Q
    |||||||||||| ||| ||||||| || |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  56007 aacttgaagaatcaagaattggagagagcttaggagctaaattgaagcctaaattgggattaatctttatctaaggtaagggggttagtctttatcataa 55908  T
Q  115 tcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtag 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55907 tcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtag 55808  T
Q  215 agatatgtttgaatatgttaatttgatgt 243  Q
    | |||||||||||||||||||||||||||    
T  55807 atatatgtttgaatatgttaatttgatgt 55779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 43 - 189
Target Start/End: Original strand, 108032 - 108179
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcatttagttaattctttttctctt-gt 141  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |    
T  108032 cttaggagctgaattgaagcctaagttggaattaatcttcatctaaggtaagggggttagtctttatcataatcatttggttaattctttttctcttcat 108131  T
Q  142 tctatgcataattgattatgagaataagtgattatcatgaacccaatc 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  108132 tctatgcataattgattatgagaataagtgattatcatgaacccaatc 108179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 17 - 243
Target Start/End: Original strand, 24385584 - 24385809
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    |||||||||| ||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24385584 cttgaagaatcaag-attggagtgagcttaggagctaaagtgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 24385682  T
Q  117 atttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagag 216  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24385683 atttagttaattccttttctcttgttctatgcataattgattatgagaataagtgattattatgaacccaatctttgaaattcgtgcttatgttgtagag 24385782  T
Q  217 atatgtttgaatatgttaatttgatgt 243  Q
    ||||||||||||||| |||||||||||    
T  24385783 atatgtttgaatatgataatttgatgt 24385809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 8 - 243
Target Start/End: Original strand, 41506631 - 41506866
Alignment:
Q  8 agagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtcttt 107  Q
    |||| |||||||||||||| ||| ||||| |||| |||| |||||||||||||||||||||| || |||||| | ||||||||||||||||||||| ||     
T  41506631 agaggagaacttgaagaatcaagaattggggtgagcttaagagctaaattgaagcctaagtttgggttaatccttatctaaggtaagggggttagttttc 41506730  T
Q  108 atcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttat 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  41506731 atcataatcatttagttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaacccaatctttgaaatccgtgcttat 41506830  T
Q  208 gttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    ||||||||||||||||||||||||||||||||||||    
T  41506831 gttgtagagatatgtttgaatatgttaatttgatgt 41506866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 86 - 243
Target Start/End: Original strand, 24716762 - 24716919
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24716762 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 24716861  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
     |||||||||||||||| |||| | |||||||||||||||||||||||||||||||||    
T  24716862 gatctttgaaattcgtggttatatggtagagatatgtttgaatatgttaatttgatgt 24716919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 86 - 243
Target Start/End: Complemental strand, 39115630 - 39115473
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    ||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39115630 taaggtaagggtgttagttttcatcataatcatttagttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaaccc 39115531  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  39115530 aatctttgacattcgtgcttatgttgtaaagatatgtttgaatatgttaatttgatgt 39115473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 86 - 242
Target Start/End: Complemental strand, 274798 - 274642
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  274798 taaggtaagggggttagtttttatcataatcatttagttaatccattttctcttgtcctatgcataattgattatgagaataagttattatcatgaaccc 274699  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatg 242  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  274698 aatctttgaaattcgtgcgtatgtggtagagatatgtttgaatatgttaatttgatg 274642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 86 - 242
Target Start/End: Original strand, 641051 - 641207
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  641051 taaggtaagggggttagtttttatcataatcatttagttaatccattttctcttgtcctatgcataattgattatgagaataagttattatcatgaaccc 641150  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatg 242  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  641151 aatctttgaaattcgtgcgtatgtggtagagatatgtttgaatatgttaatttgatg 641207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 86 - 242
Target Start/End: Original strand, 826857 - 827013
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  826857 taaggtaagggggttagtttttatcataatcatttagttaatccattttctcttgtcctatgcataattgattatgagaataagttattatcatgaaccc 826956  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatg 242  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  826957 aatctttgaaattcgtgcgtatgtggtagagatatgtttgaatatgttaatttgatg 827013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 45 - 242
Target Start/End: Original strand, 21259350 - 21259547
Alignment:
Q  45 taggagctaaattgaagcctaagttggg--attaatcttcatctaaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgtt 142  Q
    |||||||||||||||||| |||| | ||  ||||||||  | ||||||||||||||||||  || |||||||||| ||||||||||  |  |||||| ||    
T  21259350 taggagctaaattgaagcttaagctagggaattaatct--aactaaggtaagggggttagaattcatcataatcacttagttaatttctactctcttttt 21259447  T
Q  143 ctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatg 242  Q
    |||||||||| || ||||  ||||||||||||||  |||||||||  ||||||||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  21259448 ctatgcataagtgcttatttgaataagtgattattgtgaacccaacttttgaaattcgtgctcatgttgtagtgatatgtttgagtatgttaatttgatg 21259547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 43373324 - 43373424
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    |||||||||| ||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  43373324 cttgaagaatcaag-attggagtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 43373422  T
Q  117 at 118  Q
    ||    
T  43373423 at 43373424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 24928648 - 24928748
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  24928648 cttgaagaatcaag-attggagtgagcttaggagctaaattgaagtctaagttgggattaatctttatctaaggtaatggggttagtctttatcataatc 24928746  T
Q  117 at 118  Q
    ||    
T  24928747 at 24928748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 110 - 242
Target Start/End: Complemental strand, 17502492 - 17502360
Alignment:
Q  110 cataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgt 209  Q
    |||||||| ||||||| ||  || |||||| |||||||||||| || ||||  |||||||||||||| ||||||||||||||||||||| ||||| ||||    
T  17502492 cataatcacttagttagtttcttctctctttttctatgcataagtgcttatttgaataagtgattattatgaacccaatctttgaaatttgtgctcatgt 17502393  T
Q  210 tgtagagatatgtttgaatatgttaatttgatg 242  Q
    ||||| ||||||||||| |||||||||||||||    
T  17502392 tgtagtgatatgtttgagtatgttaatttgatg 17502360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 16193589 - 16193674
Alignment:
Q  32 attggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||    
T  16193589 attggagtgagcttaggagctaaattgaagcctaagttgggattcatctttatctaaggtaa-ggggttagtctttatcataatcat 16193674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 110 - 242
Target Start/End: Complemental strand, 23218208 - 23218076
Alignment:
Q  110 cataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgt 209  Q
    |||||||| ||||||| ||  || |||||| |||||||||||| || ||||  ||||||||||||||  |||||||||  ||||||||||||||||||||    
T  23218208 cataatcacttagttagtttcttctctctttttctatgcataagtgcttatttgaataagtgattattgtgaacccaacttttgaaattcgtgcttatgt 23218109  T
Q  210 tgtagagatatgtttgaatatgttaatttgatg 242  Q
     |||| ||||||||||| |||||||||||||||    
T  23218108 ggtagtgatatgtttgagtatgttaatttgatg 23218076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 134 - 242
Target Start/End: Complemental strand, 4234162 - 4234054
Alignment:
Q  134 tctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgtt 233  Q
    |||||| |||||||||||| || ||||  ||||||||||||||  |||||||||||||||||||| ||||| |||||| || ||||||||||| ||||||    
T  4234162 tctctttttctatgcataagtgcttatttgaataagtgattattgtgaacccaatctttgaaatttgtgctcatgttgcagtgatatgtttgagtatgtt 4234063  T
Q  234 aatttgatg 242  Q
    |||||||||    
T  4234062 aatttgatg 4234054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 22907052 - 22907160
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| || | ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||    
T  22907052 gagagaagaacttgaagaatcca--attgg-gtaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctt 22907148  T
Q  107 tatcataatcat 118  Q
    ||||||||||||    
T  22907149 tatcataatcat 22907160  T

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Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 5238479 - 5238404
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  5238479 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 5238404  T

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Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 24661119 - 24661194
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  24661119 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 24661194  T

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Target: chr8; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 43685938 - 43685863
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  43685938 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 43685863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 22321437 - 22321503
Alignment:
Q  177 catgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  22321437 catgaacccaatctttgaaattcgtgctcaggttgtagagatatgtttgaatatgttaatttgatgt 22321503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 7000442 - 7000551
Alignment:
Q  8 agagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtcttt 107  Q
    |||| |||||||| ||||| ||| ||||| |||| ||||||||||||||||||||||||||| || |||||| | |||||| |||||||||||||| ||     
T  7000442 agaggagaacttgtagaatcaagaattggggtgagcttaggagctaaattgaagcctaagtttgggttaatccttatctaaagtaagggggttagttttc 7000541  T
Q  108 atcataatca 117  Q
    ||||||||||    
T  7000542 atcataatca 7000551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 21494314 - 21494388
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| ||||||||||||| ||||||||| | ||||||||||||||||||||||||  ||||||||||    
T  21494314 ttaggagctaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcttcataatcat 21494388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 22886728 - 22886654
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| |||||| |||||| ||||||||| | | |||||||||||||||||||||| |||||||||||    
T  22886728 ttaggagctaaagtgaagcttaagtttggattaatcattacctaaggtaagggggttagtcttaatcataatcat 22886654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 3431134 - 3431208
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| ||||||| ||||| ||||| ||| | | |||||||||||||||||||||| |||||||||||    
T  3431134 ttaggagctaaagtgaagcccaagtttggattgatcataacctaaggtaagggggttagtcttcatcataatcat 3431208  T

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Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 16872892 - 16873000
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| || | ||||||||||||||||||||   |||| |  ||||||||| ||||||||||||||||||||  |    
T  16872892 gagagaagaacttgaagaatcca--attgg-gtaagcttaggagctaaattgaagcaagagtttgagttaatcttcttctaaggtaagggggttagttat 16872988  T
Q  107 tatcataatcat 118  Q
    ||||||||||||    
T  16872989 tatcataatcat 16873000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 17345962 - 17345887
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| |||||||||   |||| || ||||||||| ||| ||||||||||||||||||| |||||||||||    
T  17345962 cttaggagctgaattgaagcaagagtttgggttaatcttcttcttaggtaagggggttagtcttcatcataatcat 17345887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 2545339 - 2545265
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| |||||| ||| || | ||||||| | | |||||||||||||||||||||| |||||||||||    
T  2545339 ttaggagctaaagtgaagcttaaatttgaattaatcataacctaaggtaagggggttagtcttcatcataatcat 2545265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 13662140 - 13662214
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||| |||||||||   |||| || ||||||||| ||||||||||||||||||||  |||||||||||||    
T  13662140 ttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 13662214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 13720803 - 13720877
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||| |||||||||   |||| || ||||||||| ||||||||||||||||||||  |||||||||||||    
T  13720803 ttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 13720877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 22006132 - 22006207
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| |||||||||   |||| |  ||||||||| || |||||||||||||||||  |||||||||||||    
T  22006132 cttaggagctgaattgaagcaagagtttgagttaatcttcttcaaaggtaagggggttagttattatcataatcat 22006207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 16038744 - 16038818
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| ||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  16038744 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 16038818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 242
Target Start/End: Original strand, 18118259 - 18118337
Alignment:
Q  164 aataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatg 242  Q
    |||||||||||||  |||||  |||| ||||||||||||||  |||| ||||||||||||||  ||| | |||||||||    
T  18118259 aataagtgattattgtgaacttaatcgttgaaattcgtgctcgtgttatagagatatgtttgcgtatataaatttgatg 18118337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 118
Target Start/End: Original strand, 16404900 - 16404932
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||| |||||||||||    
T  16404900 taaggtaagggggttagtcttcatcataatcat 16404932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 118
Target Start/End: Original strand, 16674295 - 16674339
Alignment:
Q  74 ttaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||| ||||||||||||||||||||  |||||| ||||||    
T  16674295 ttaatcttcttctaaggtaagggggttagttattatcacaatcat 16674339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 17 - 244
Target Start/End: Original strand, 6375 - 6601
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    |||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||    
T  6375 cttgaagaatcaag-attggagtgagcttaggagctaaattgaagcctaagttgggattattccttatctaaggtaagggggttagtctttatcataatc 6473  T
Q  117 atttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6474 atttagttaattctttttctcttgttctatgcataattgattatgataataggtgcttatcatgaacccaatctttgaaattcgtgcttatgttgtagag 6573  T
Q  217 atatgtttgaatatgttaatttgatgtc 244  Q
    ||||||||||||||||||||||||||||    
T  6574 atatgtttgaatatgttaatttgatgtc 6601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 7 - 243
Target Start/End: Original strand, 13208 - 13443
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||| ||||| |||| ||| ||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13208 gagagaagagcttgaggaatcaag-attgg-gtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctt 13305  T
Q  107 tatcataatcatttagttaattctttttctcttg-ttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgctt 205  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13306 tatcataatcatttggttaattctttttctcttgattctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgctt 13405  T
Q  206 atgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||| |||||||||||||||||    
T  13406 atgttgtagagatatgtttggatatgttaatttgatgt 13443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 182; Significance: 2e-98; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 7 - 243
Target Start/End: Original strand, 15272134 - 15272369
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||| ||||| |||| ||| ||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15272134 gagagaagagcttgaggaatcaag-attgg-gtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctt 15272231  T
Q  107 tatcataatcatttagttaattctttttctcttg-ttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgctt 205  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15272232 tatcataatcatttggttaattctttttctcttgattctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgctt 15272331  T
Q  206 atgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||| |||||||||||||||||    
T  15272332 atgttgtagagatatgtttggatatgttaatttgatgt 15272369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 42 - 243
Target Start/End: Complemental strand, 14952161 - 14951960
Alignment:
Q  42 acttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgt 141  Q
    ||||||||||| |||||||||   |||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14952161 acttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgt 14952062  T
Q  142 tctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgat 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14952061 tctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgat 14951962  T
Q  242 gt 243  Q
    ||    
T  14951961 gt 14951960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 86 - 243
Target Start/End: Original strand, 5682428 - 5682584
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5682428 taaggtaagtgggttagtttttatcataatcatttagttaatt-ttttcctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 5682526  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5682527 aatctttgaaattcgtgcttatgtggtagagatatgtttgaatatgttaatttgatgt 5682584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 7 - 188
Target Start/End: Original strand, 15135830 - 15136010
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||| ||||| |||| ||| ||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15135830 gagagaagagcttgaggaatcaag-attgg-gtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctt 15135927  T
Q  107 tatcataatcatttagttaattctttttctcttg-ttctatgcataattgattatgagaataagtgattatcatgaacccaat 188  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15135928 tatcataatcatttggttaattctttttctcttgattctatgcataattgattatgagaataagtgattatcatgaacccaat 15136010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 86 - 243
Target Start/End: Original strand, 25119107 - 25119264
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    ||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25119107 taaggtaagggagttagtttttatcataatcatttggttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaaccc 25119206  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    ||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25119207 aatcttgaaaattcgtgcttatgtggtagagatatgtttgaatatgttaatttgatgt 25119264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 13246842 - 13246737
Alignment:
Q  13 agaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcat 112  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13246842 agaacttgaagaatcaagaattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcat 13246743  T
Q  113 aatcat 118  Q
    ||||||    
T  13246742 aatcat 13246737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 122294 - 122194
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    |||||||||| ||| |||||||||| |||| |||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  122294 cttgaagaatcaag-attggagtgagcttaagagctaaattgaagtctaagttgggattaatctttatctaaggtaaggggattagtctttatcataatc 122196  T
Q  117 at 118  Q
    ||    
T  122195 at 122194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 15674938 - 15675041
Alignment:
Q  15 aacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataa 114  Q
    |||||||||||| ||| |||||||||| ||||||||||||| |||||||||||||| | |||||| | |||||||||||||||||||||||| |||||||    
T  15674938 aacttgaagaatcaagaattggagtgagcttaggagctaaagtgaagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataa 15675037  T
Q  115 tcat 118  Q
    ||||    
T  15675038 tcat 15675041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 10104099 - 10104202
Alignment:
Q  15 aacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataa 114  Q
    |||||||||||| ||| |||||||||| ||||||||||||| | |||||||||||| | |||||| | |||||||||||||||||||||||| |||||||    
T  10104099 aacttgaagaatcaagaattggagtgagcttaggagctaaagtaaagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataa 10104198  T
Q  115 tcat 118  Q
    ||||    
T  10104199 tcat 10104202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 110 - 243
Target Start/End: Complemental strand, 19559690 - 19559557
Alignment:
Q  110 cataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgt 209  Q
    |||||||| ||||||||||  || |||||| |||||||||||| || ||||  |||||||||||||| ||| ||||||  |||||||||| |||| ||||    
T  19559690 cataatcaattagttaatttcttctctctttttctatgcataagtgcttatttgaataagtgattattatgtacccaacttttgaaattcctgctcatgt 19559591  T
Q  210 tgtagagatatgtttgaatatgttaatttgatgt 243  Q
    ||||| |||||||||||  |||||||||||||||    
T  19559590 tgtagtgatatgtttgagcatgttaatttgatgt 19559557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 26680625 - 26680517
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| || | ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||    
T  26680625 gagagaagaacttgaagaatcca--attgg-gtaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctt 26680529  T
Q  107 tatcataatcat 118  Q
    ||||||||||||    
T  26680528 tatcataatcat 26680517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 16608970 - 16609045
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  16608970 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 16609045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 33241114 - 33241011
Alignment:
Q  15 aacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataa 114  Q
    |||||||||||| ||| |||||||||| |||||||| ||||  ||||||||||||| | |||||| | |||||||||||||||||||||||| |||||||    
T  33241114 aacttgaagaatcaagaattggagtgagcttaggagttaaagcgaagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataa 33241015  T
Q  115 tcat 118  Q
    ||||    
T  33241014 tcat 33241011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 55376417 - 55376525
Alignment:
Q  8 agagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtcttt 107  Q
    |||| |||||||||||||  ||| ||||| |||| ||||||||||||||||||||||||||| || || ||| | ||||||||||||||||||||||||     
T  55376417 agaggagaacttgaagaaccaagaattgg-gtgagcttaggagctaaattgaagcctaagtttgggttgatccttatctaaggtaagggggttagtcttc 55376515  T
Q  108 atcataatca 117  Q
    ||||||||||    
T  55376516 atcataatca 55376525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 15 - 115
Target Start/End: Complemental strand, 31132728 - 31132628
Alignment:
Q  15 aacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataa 114  Q
    |||||| ||||| ||| |||||||||| ||||||||||||| || ||||||||||| | |||||| | |||||||||||||||||||||||| |||||||    
T  31132728 aacttgtagaatcaagaattggagtgagcttaggagctaaagtggagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataa 31132629  T
Q  115 t 115  Q
    |    
T  31132628 t 31132628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 16327797 - 16327872
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  |||||||||| |||||||||||||||||||||||||||||||||    
T  16327797 cttaggagctaaattgaagcctaggtttggcctaatcttcatataaggtaagggggttagtctttatcataatcat 16327872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 40885386 - 40885491
Alignment:
Q  14 gaacttgaagaattaagtatt-ggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcat 112  Q
    ||||||||||||| ||| ||| ||||||||  ||||||||||| ||||||||||||| ||||||||| | ||||||||||||||||||||  || |||||    
T  40885386 gaacttgaagaatcaaggatttggagtgaatctaggagctaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagaattcatcat 40885485  T
Q  113 aatcat 118  Q
    ||||||    
T  40885486 aatcat 40885491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 243
Target Start/End: Complemental strand, 49071994 - 49071885
Alignment:
Q  134 tctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgtt 233  Q
    |||||| |||||||||||| || ||||  ||||||||||| ||  ||||||||| | |||||||||||||| || |||||| ||||||||||| ||||||    
T  49071994 tctctttttctatgcataagtgcttatttgaataagtgatcattgtgaacccaaccgttgaaattcgtgctcatattgtagtgatatgtttgagtatgtt 49071895  T
Q  234 aatttgatgt 243  Q
    ||||||||||    
T  49071894 aatttgatgt 49071885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 32460561 - 32460635
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| ||||||||||||| ||||||||| | ||||||||||||||||||||||||  ||||||||||    
T  32460561 ttaggagctaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcttcataatcat 32460635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 10488954 - 10488879
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||| |||| ||||||||| |||||||    
T  10488954 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaaggtggttggtctttatcttaatcat 10488879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 22738650 - 22738577
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatca 117  Q
    |||||||||||| |||||||||||||  |||||| | |||||||||||||||||||| ||||| ||||||||||    
T  22738650 ttaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggtttgtcttcatcataatca 22738577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 13048092 - 13048160
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatca 111  Q
    |||||||| |||||||||||||| ||| ||  ||||||||||||||| |||||||||||||||||||||    
T  13048092 cttaggagttaaattgaagcctaggtttggtctaatcttcatctaagttaagggggttagtctttatca 13048160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 20001138 - 20001030
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| || | ||||||||||||||||||||   |||| || ||||||||| ||||||||||||||||||||  |    
T  20001138 gagagaagaacttgaagaatcca--attgg-gtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttat 20001042  T
Q  107 tatcataatcat 118  Q
    ||||||||||||    
T  20001041 tatcataatcat 20001030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 26339434 - 26339327
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| || | ||||||||||||||||||||   |||| || ||||||||| ||||||||||||||||||||  |    
T  26339434 gagagaagaacttgaagaatcca--attgg-gtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttat 26339338  T
Q  107 tatcataatca 117  Q
    |||||||||||    
T  26339337 tatcataatca 26339327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 237
Target Start/End: Original strand, 34177542 - 34177691
Alignment:
Q  85 ctaaggtaagggggttagtctttatcataatcatttagt-taattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaac 183  Q
    ||||||||||||| ||||  || |||||||||||||||| |||||   ||||  ||||| |||| |||| || |||   ||||||||||||||  ||||     
T  34177542 ctaaggtaagggg-ttagaattcatcataatcatttagtgtaatt---tttcatttgttgtatgaataagtgcttaattgaataagtgattattgtgaat 34177637  T
Q  184 ccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatt 237  Q
    ||||||||  ||||||||||| ||||||||| ||||||||||| ||||||||||    
T  34177638 ccaatcttgaaaattcgtgctcatgttgtagtgatatgtttgagtatgttaatt 34177691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 7131940 - 7132014
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||| |||||||||   |||| |||||||||||| ||||||||||||||||||||  |||||||||||||    
T  7131940 ttaggagctgaattgaagcaagagtttggattaatcttcttctaaggtaagggggttagttattatcataatcat 7132014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 8045346 - 8045272
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| ||||| ||||||| | ||||||| | | |||||||||||||||||||||| |||||||||||    
T  8045346 ttaggagctaaagtgaagtctaagtttgaattaatcataacctaaggtaagggggttagtcttcatcataatcat 8045272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 118
Target Start/End: Original strand, 14500074 - 14500144
Alignment:
Q  48 gagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||| |||||| |||||| ||||||||| | |||||||||||||||||||| ||| |||||||||||    
T  14500074 gagctaaagtgaagcttaagtttggattaatcattatctaaggtaagggggttaggcttcatcataatcat 14500144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 15287118 - 15287194
Alignment:
Q  42 acttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||| |||||||||   |||| || ||||||||| ||||||||||||||||||||  |||||||||||||    
T  15287118 acttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 15287194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 15294227 - 15294303
Alignment:
Q  42 acttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||| |||||||||   |||| || ||||||||| ||||||||||||||||||||  |||||||||||||    
T  15294227 acttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 15294303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 18248599 - 18248527
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    ||||||| |||| |||||| ||||||  |||||||| |||||||||||||||||||||||  |||||||||||    
T  18248599 ttaggagttaaagtgaagcttaagttaagattaatcatcatctaaggtaagggggttagttattatcataatc 18248527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 22351937 - 22352012
Alignment:
Q  42 acttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatca 117  Q
    ||||||||||| |||||||||   |||| || ||||||||| ||||||||||||||||||||  ||||||||||||    
T  22351937 acttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatca 22352012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 47358032 - 47357958
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| |||||||||   ||||||| ||||||||| ||||||||||||||||||||  |||||| ||||||    
T  47358032 cttaggagctgaattgaagcaagagttggg-ttaatcttcttctaaggtaagggggttagttattatcacaatcat 47357958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 8378567 - 8378493
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||| |||| |||||| ||||||  |||||| | ||||||||||||||||| |||||  |||||||||||||    
T  8378567 ttaggagttaaagtgaagcttaagttaagattaaacatcatctaaggtaaggggattagttattatcataatcat 8378493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 14996519 - 14996445
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||| |||||||||   |||| || ||||||||| | ||||||||||||||||||  |||||||||||||    
T  14996519 ttaggagctgaattgaagcaagagtttgggttaatcttcttttaaggtaagggggttagttattatcataatcat 14996445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 118
Target Start/End: Original strand, 17145562 - 17145606
Alignment:
Q  74 ttaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||| ||||||||||||||||||||  |||||||||||||    
T  17145562 ttaatcttcttctaaggtaagggggttagttattatcataatcat 17145606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 118
Target Start/End: Complemental strand, 16523216 - 16523146
Alignment:
Q  48 gagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||| ||||||  ||||| | ||| ||| | | |||||||||||||||||||||| |||||||||||    
T  16523216 gagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggttagtcttcatcataatcat 16523146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 19697236 - 19697310
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||| |||| ||||||||||||  | ||||||| | | ||||||||||||||||||| ||  ||||||||||    
T  19697236 ttaggaggtaaagtgaagcctaagtgtgaattaatcataacctaaggtaagggggttagtgttcttcataatcat 19697310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 19707821 - 19707895
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||| |||| ||||||||||||  | ||||||| | | ||||||||||||||||||| ||  ||||||||||    
T  19707821 ttaggaggtaaagtgaagcctaagtgtgaattaatcataacctaaggtaagggggttagtgttcttcataatcat 19707895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 14500208 - 14500268
Alignment:
Q  178 atgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaattt 238  Q
    |||||||||||||||||| ||||||||  |||| | | |||| |||||| |||||||||||    
T  14500208 atgaacccaatctttgaatttcgtgctcttgttttggtgataagtttgagtatgttaattt 14500268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 118
Target Start/End: Original strand, 54118168 - 54118200
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||| |||||||||||    
T  54118168 taaggtaagggggttagtcttcatcataatcat 54118200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 17 - 242
Target Start/End: Original strand, 12350 - 12574
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    |||||||||| ||| |||||| ||| ||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||| ||||||||||||    
T  12350 cttgaagaatcaag-attggattgagcttaggagctaaattgaagtctaagttgggatgaatctttatctaaggtaagggggttagtttttatcataatc 12448  T
Q  117 atttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagag 216  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  12449 atttagttaattctttttcttttgttctatgcataattgattatgggaataagttattatcatgaacccaatctttgaaatttgtgcttatgttgtagag 12548  T
Q  217 atatgtttgaatatgttaatttgatg 242  Q
    ||||||||||||||||||||||||||    
T  12549 atatgtttgaatatgttaatttgatg 12574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 174; Significance: 1e-93; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 7 - 243
Target Start/End: Complemental strand, 23995356 - 23995121
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||| ||||| |||| ||| ||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23995356 gagagaagagcttgaggaatcaag-attgg-gtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctt 23995259  T
Q  107 tatcataatcatttagttaattctttttctcttg-ttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgctt 205  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  23995258 tatcataatcatttggttaattctttttctcttgattctatgcataattgattatgagaataagtgattatcatgaacccaatatttggaattcgtgctt 23995159  T
Q  206 atgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||| |||||||||||||||||    
T  23995158 atgttgtagagatatgtttggatatgttaatttgatgt 23995121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 17 - 243
Target Start/End: Complemental strand, 26090159 - 26089933
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    |||||||||| ||| ||||||||||  |||||||||||| |||||||||||||  |||| | | | | ||||||||||||||||||||||||||||||||    
T  26090159 cttgaagaatcaag-attggagtgaggttaggagctaaagtgaagcctaagtttagattgagcattacctaaggtaagggggttagtctttatcataatc 26090061  T
Q  117 atttagttaattctttttctcttg-ttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtaga 215  Q
    ||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26090060 atttgattaattctttttctcttgattctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtaga 26089961  T
Q  216 gatatgtttgaatatgttaatttgatgt 243  Q
    ||||||||||||||||||||||||||||    
T  26089960 gatatgtttgaatatgttaatttgatgt 26089933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 44 - 242
Target Start/End: Original strand, 15742078 - 15742275
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttc 143  Q
    |||||||||||| ||||||||||||| ||||||||| | | |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  15742078 ttaggagctaaagtgaagcctaagtttggattaatcattacctaaggtaagggggttagtctttatcataatcctttggttaattctttttctcttgttc 15742177  T
Q  144 tatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatg 242  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15742178 -atgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgattatgttaatttgatg 15742275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 86 - 243
Target Start/End: Original strand, 19983192 - 19983349
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  19983192 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaatcc 19983291  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19983292 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 19983349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 86 - 243
Target Start/End: Original strand, 35015057 - 35015214
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  35015057 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaaccc 35015156  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35015157 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 35015214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 44 - 243
Target Start/End: Original strand, 18002353 - 18002553
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcatttagttaattctttttctcttg-tt 142  Q
    |||||||||||| ||||| |||||||  |||||||| | | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  18002353 ttaggagctaaagtgaaggctaagtttagattaatcataacctaaggtaagggggttagtctttatcataatcatttggttaattctttttctcttgatt 18002452  T
Q  143 ctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatg 242  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18002453 ctatgcataattgattatgggcataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttcatttgatg 18002552  T
Q  243 t 243  Q
    |    
T  18002553 t 18002553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 86 - 243
Target Start/End: Complemental strand, 18583672 - 18583515
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||    
T  18583672 taaggtaagggggttagttttcatcataatcatttagttaattctttttctcctgttctatgcatcattgattatgggaataagtgattatcatgaaccc 18583573  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18583572 aatctttgaaattcgtgcttatgttgtagagatgtgtttgaatatgttaatttgatgt 18583515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 87 - 243
Target Start/End: Complemental strand, 4991427 - 4991271
Alignment:
Q  87 aaggtaagggggttagtctttatcataatcatttagttaattctttttctcttg-ttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  4991427 aaggtaagggggttagtctttatcataatcatttgtttaattctttttctcttgattttatgcataattgattatgagaataagtgattatcatgaaccc 4991328  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  4991327 aatctttgaaattcgtgcttatgttgtagagatatgtttggatatgtt-atttgatgt 4991271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 23148408 - 23148303
Alignment:
Q  13 agaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcat 112  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||    
T  23148408 agaacttgaagaatcaagaattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcatcat 23148309  T
Q  113 aatcat 118  Q
    ||||||    
T  23148308 aatcat 23148303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 23153859 - 23153754
Alignment:
Q  13 agaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcat 112  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||    
T  23153859 agaacttgaagaatcaagaattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcatcat 23153760  T
Q  113 aatcat 118  Q
    ||||||    
T  23153759 aatcat 23153754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 27751852 - 27751742
Alignment:
Q  8 agagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtcttt 107  Q
    |||| |||||||||||||| ||| ||||| |||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||     
T  27751852 agaggagaacttgaagaatcaagaattggggtgagcttaggagctaaattgaagcctaagtttggattaatctttatctaaggtaagggggttagtcttc 27751753  T
Q  108 atcataatcat 118  Q
    |||||||||||    
T  27751752 atcataatcat 27751742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 15889607 - 15889762
Alignment:
Q  88 aggtaagggggttagtcttta-tcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccca 186  Q
    |||||||||||||||  || | ||||||||| ||||||||||  || |||||| |||||||||||| || ||||  ||||| ||||||||  ||||||||    
T  15889607 aggtaagggggttagatttcaatcataatcacttagttaatttcttctctctttttctatgcataagtgtttatttgaatacgtgattattgtgaaccca 15889706  T
Q  187 atctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatg 242  Q
    | |||||||||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  15889707 acctttgaaattcgtgctcatgttgtagtgatatgtttgagtatgttaatttgatg 15889762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 85 - 242
Target Start/End: Original strand, 25640455 - 25640611
Alignment:
Q  85 ctaaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacc 184  Q
    ||||||||||||||||||  || |||||||||| |||| |||||  |  |||||| |||||||||||| || ||||  ||||||||||||||  ||||||    
T  25640455 ctaaggtaagggggttagaattcatcataatcacttaggtaatttctactctctttttctatgcataagtgcttatttgaataagtgattattgtgaacc 25640554  T
Q  185 caatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatg 242  Q
    |||  ||||||||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  25640555 caacttttgaaattcgtgctcatgttgtag-gatatgtttgagtatgttaatttgatg 25640611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 110 - 242
Target Start/End: Original strand, 22585470 - 22585602
Alignment:
Q  110 cataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgt 209  Q
    |||||||| ||||||| ||  || |||||| |||||||||||| || ||||  ||||||||||||||  |||||||||||||||||||||||||| ||||    
T  22585470 cataatcacttagttagtttcttctctctttttctatgcataagtgcttatttgaataagtgattattttgaacccaatctttgaaattcgtgctcatgt 22585569  T
Q  210 tgtagagatatgtttgaatatgttaatttgatg 242  Q
    ||||| ||||||||||| ||| |||||||||||    
T  22585570 tgtagtgatatgtttgagtattttaatttgatg 22585602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 110 - 242
Target Start/End: Original strand, 22590301 - 22590433
Alignment:
Q  110 cataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgt 209  Q
    |||||||| ||||||| ||  || |||||| |||||||||||| || ||||  ||||||||||||||  |||||||||||||||||||||||||| ||||    
T  22590301 cataatcacttagttagtttcttctctctttttctatgcataagtgcttatttgaataagtgattattttgaacccaatctttgaaattcgtgctcatgt 22590400  T
Q  210 tgtagagatatgtttgaatatgttaatttgatg 242  Q
    ||||| ||||||||||| ||| |||||||||||    
T  22590401 tgtagtgatatgtttgagtattttaatttgatg 22590433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 110 - 243
Target Start/End: Original strand, 15004831 - 15004963
Alignment:
Q  110 cataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgt 209  Q
    |||||||| ||||||| ||  || |||||| |||||||||||| || ||||  ||||||| ||||||  |||||||||||||||||||||||||| ||||    
T  15004831 cataatcacttagttagtttcttctctctttttctatgcataagtgcttatttgaataagagattattgtgaacccaatctttgaaattcgtgctcatgt 15004930  T
Q  210 tgtagagatatgtttgaatatgttaatttgatgt 243  Q
    ||||| ||||||||||| |||| |||||||||||    
T  15004931 tgtagtgatatgtttgagtatg-taatttgatgt 15004963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 29666290 - 29666181
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||| |||||||||| ||  ||||| |||| ||||||||||||||||||||||||||| ||||||||| | ||||||  |||| |||||||||||    
T  29666290 gagagaagagcttgaagaatcaa--attggggtgagcttaggagctaaattgaagcctaagtttggattaatcattatctaacataagtgggttagtctt 29666193  T
Q  107 tatcataatcat 118  Q
     |||||||||||    
T  29666192 catcataatcat 29666181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 1649978 - 1650053
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  |||||||||| |||||||||||||||||||||||||||||||||    
T  1649978 cttaggagctaaattgaagcctaggtttggtctaatcttcatttaaggtaagggggttagtctttatcataatcat 1650053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 35009281 - 35009384
Alignment:
Q  15 aacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataa 114  Q
    |||||||||||| ||| ||||| |||||  || |||||||| ||||||| ||||| ||||||||| | |||||| ||||||||||||||||| |||||||    
T  35009281 aacttgaagaatcaagaattggggtgaatctaagagctaaagtgaagccaaagtttggattaatcattatctaaagtaagggggttagtcttcatcataa 35009380  T
Q  115 tcat 118  Q
    ||||    
T  35009381 tcat 35009384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 32276617 - 32276691
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| |||||| |||||| ||||||||| | |||||||||||||||||||||||| |||||||||||    
T  32276617 ttaggagctaaagtgaagcttaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcat 32276691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 106
Target Start/End: Original strand, 16299844 - 16299906
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    |||||||||||| ||||||||||||| ||||||||| | | ||||||||||||||||||||||    
T  16299844 ttaggagctaaagtgaagcctaagtttggattaatcattacctaaggtaagggggttagtctt 16299906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 18823241 - 18823315
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| |||||  |||||| ||||||||| | | |||||||||||||||||||||| |||||||||||    
T  18823241 ttaggagctaaagtgaagtttaagtttggattaatcataacctaaggtaagggggttagtcttcatcataatcat 18823315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 18839096 - 18839170
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||| ||||||| |||||| |||||| ||||||||| | | |||||||||||||||||||||| |||||||||||    
T  18839096 ttagaagctaaagtgaagcttaagtttggattaatcataacctaaggtaagggggttagtcttcatcataatcat 18839170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 16232275 - 16232199
Alignment:
Q  42 acttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||| |||||||||   |||| || ||||||||| ||||||||||||||||||||  |||||||||||||    
T  16232275 acttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 16232199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 23978184 - 23978076
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| || | ||||||||||||||||||||   |||| || ||||||||| ||||||||||||| ||||||  |    
T  23978184 gagagaagaacttgaagaatcca--attgg-gtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggcgttagttat 23978088  T
Q  107 tatcataatcat 118  Q
    ||||||||||||    
T  23978087 tatcataatcat 23978076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 1657618 - 1657693
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| ||||||| |   |||| || ||||||||| ||||||||||||||||||||||| |||||||||||    
T  1657618 cttaggagctgaattgaaacaagagtttgggttaatcttcttctaaggtaagggggttagtcttcatcataatcat 1657693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 15862864 - 15862789
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||| | |||||||||   |||| || ||||||||| ||||||||||||||||||||||| |||||||||||    
T  15862864 cttaggaggtgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagtcttcatcataatcat 15862789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 19610400 - 19610325
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| |||||||||   |||| || ||||||||| ||||||||||||||||||||  |||||||||||||    
T  19610400 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 19610325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 29869649 - 29869724
Alignment:
Q  42 acttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatca 117  Q
    ||||||||||| |||||||||   |||| || || |||||| ||||||||||||||||||||  ||||||||||||    
T  29869649 acttaggagctgaattgaagcaagagtttgggttgatcttcttctaaggtaagggggttagttattatcataatca 29869724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 13620669 - 13620743
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| |||||||| |||| | ||| ||| | | ||||||||||||||||||||||  ||||||||||    
T  13620669 ttaggagctaaagtgaagcctgagtttgaattgatcataacctaaggtaagggggttagtcttcttcataatcat 13620743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 18086696 - 18086757
Alignment:
Q  42 acttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagt 103  Q
    ||||||||||| |||||||||   |||| || ||||||||| ||||||||||||||||||||    
T  18086696 acttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagt 18086757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 1556387 - 1556312
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| |||||||||   |||| |  ||||||||| ||||||||||||||||||||  | |||||||||||    
T  1556387 cttaggagctgaattgaagcaagagtttgtgttaatcttcttctaaggtaagggggttagttatcatcataatcat 1556312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 14128502 - 14128552
Alignment:
Q  14 gaacttgaagaattaagtattggagtgaacttaggagctaaattgaagccta 65  Q
    |||||||||||| |||| ||||| |||| |||||||||||||||||||||||    
T  14128502 gaacttgaagaactaaggattgg-gtgagcttaggagctaaattgaagccta 14128552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 17 - 243
Target Start/End: Original strand, 193329 - 193545
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    |||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  193329 cttgaagaattaag-attggagtgagcttaggagctaaagtgaagcctaagttgggattaatcttcatttaaggtaagggggttagtctttatcataatc 193427  T
Q  117 atttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagag 216  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||         ||||    
T  193428 atttggttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatcattgaaattcgtgc---------agag 193518  T
Q  217 atatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||||||||||    
T  193519 atatgtttgaatatgttaatttgatgt 193545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 155; Significance: 2e-82; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 45 - 243
Target Start/End: Original strand, 15861285 - 15861483
Alignment:
Q  45 taggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttct 144  Q
    |||||||| |||||||||   |||| || |||||| || || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15861285 taggagctgaattgaagcaagagttagggttaatcatcttcaaaggtaagggggttagtctttatcataatcatttggttaattctttttctcttgttct 15861384  T
Q  145 atgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15861385 atgcataattgattatgggaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 15861483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 86 - 243
Target Start/End: Original strand, 44034871 - 44035028
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44034871 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 44034970  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||| || |||||||||||| |||||||||||||||||||||||||||    
T  44034971 aatctttgaaattcttgtttatgttgtagatatatgtttgaatatgttaatttgatgt 44035028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 86 - 243
Target Start/End: Complemental strand, 21860366 - 21860209
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21860366 taaggtaagggggttagtttttatcataatcatttggttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaaccc 21860267  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  21860266 aatctttgaaattcgtacttatgtggtagagatatgtttgaatatgttaatttgatgt 21860209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 37844301 - 37844406
Alignment:
Q  13 agaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcat 112  Q
    ||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  37844301 agaacttgaagaactaaggattggagtgagcttaggagctaaattgaagcctaagttgggattaatttttatctaaggtaagggggttagtctttatcat 37844400  T
Q  113 aatcat 118  Q
    ||||||    
T  37844401 aatcat 37844406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 20446092 - 20445987
Alignment:
Q  13 agaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcat 112  Q
    ||||||||||||| |||| |||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  20446092 agaacttgaagaactaaggattggagtgagcttaggagttaaattgaagcctaagttgggattaatctttatctaaggtaagggagttagtctttatcat 20445993  T
Q  113 aatcat 118  Q
    ||||||    
T  20445992 aatcat 20445987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 20893478 - 20893583
Alignment:
Q  13 agaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcat 112  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||    
T  20893478 agaacttgaagaatcaagaattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcatcat 20893577  T
Q  113 aatcat 118  Q
    ||||||    
T  20893578 aatcat 20893583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 163 - 243
Target Start/End: Complemental strand, 22367296 - 22367216
Alignment:
Q  163 gaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22367296 gaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 22367216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 20531856 - 20531751
Alignment:
Q  13 agaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcat 112  Q
    ||||||||||||| |||| |||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||   ||||||||||||||    
T  20531856 agaacttgaagaactaaggattggagtgagcttaggagataaattgaagcctaagttgggattaatctttatctaaggtaaggaaattagtctttatcat 20531757  T
Q  113 aatcat 118  Q
    ||||||    
T  20531756 aatcat 20531751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 20913439 - 20913335
Alignment:
Q  13 agaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcat 112  Q
    |||| ||||||||| ||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  20913439 agaaattgaagaatcaag-attggagtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcgt 20913341  T
Q  113 aatcat 118  Q
    ||||||    
T  20913340 aatcat 20913335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 41218760 - 41218667
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcat 179  Q
    |||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  41218760 taaggtaagggggttagttttcatcatgatcatttagttaattctttttctcttgttctatgcataattgattatgggaataagtgattctcat 41218667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 20931736 - 20931650
Alignment:
Q  32 attggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| ||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  20931736 attggagtgagcttagcagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagcctttatcataatcat 20931650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 45051801 - 45051726
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  |||||||||| |||||||||||||||||||||||||||||||||    
T  45051801 cttaggagctaaattgaagcctaggtttggtctaatcttcatttaaggtaagggggttagtctttatcataatcat 45051726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 51452884 - 51452809
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  |||||||||||||||||||||||||||||||||||| |||||||    
T  51452884 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcttaatcat 51452809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 117
Target Start/End: Original strand, 7640775 - 7640882
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| || | ||||||||||||||||||||   |||| || ||||||||| ||||||||||||||||||||  |    
T  7640775 gagagaagaacttgaagaatcca--attgg-gtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttat 7640871  T
Q  107 tatcataatca 117  Q
    |||||||||||    
T  7640872 tatcataatca 7640882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 2116633 - 2116558
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||| |||||||||||||||||| ||| ||  |||||||||| |||||||| |||||||||  |||||||||||||    
T  2116633 cttatgagctaaattgaagcctaggtttggtctaatcttcatttaaggtaaaggggttagtgattatcataatcat 2116558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 22035862 - 22035755
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| || | |||||||||| |||||||||   |||| || ||||||||| ||||||||||||||||||||  |    
T  22035862 gagagaagaacttgaagaatcca--attgg-gtaagcttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttat 22035766  T
Q  107 tatcataatca 117  Q
    |||||||||||    
T  22035765 tatcataatca 22035755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 46523803 - 46523695
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| || | |||||||| |||||| ||||   |||| || ||||||||| ||||||||||||||||||||  |    
T  46523803 gagagaagaacttgaagaatcca--attgg-gtaagcttaggagataaattaaagcaagagtttgggttaatcttcttctaaggtaagggggttagttat 46523707  T
Q  107 tatcataatcat 118  Q
    ||||||||||||    
T  46523706 tatcataatcat 46523695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 18598848 - 18598908
Alignment:
Q  42 acttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagt 103  Q
    ||||||||||| |||||||||   ||||||| ||||||||| ||||||||||||||||||||    
T  18598848 acttaggagctgaattgaagcaagagttggg-ttaatcttcttctaaggtaagggggttagt 18598908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 118
Target Start/End: Complemental strand, 41394559 - 41394527
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||||||||||||||||||||||||    
T  41394559 taaggtaagggggttagtctttatcataatcat 41394527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 9783919 - 9783990
Alignment:
Q  45 taggagctaaattgaagcctaagtt-gggattaatcttcatctaaggtaagggggttagtctttatcataatca 117  Q
    ||||||| ||||||||||||||| | ||||||| |||  ||||||||||||||||||||  || ||||||||||    
T  9783919 taggagcaaaattgaagcctaagctagggattactct--atctaaggtaagggggttagaattcatcataatca 9783990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 5072259 - 5072335
Alignment:
Q  42 acttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||| |||||||||  |  || || ||||||||| || |||||||||||||||||  |||||| ||||||    
T  5072259 acttaggagctgaattgaagcaaagattagggttaatcttcttcaaaggtaagggggttagttattatcacaatcat 5072335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 86 - 243
Target Start/End: Complemental strand, 80219 - 80062
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  80219 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 80120  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  80119 aatctttgaaatttgtgcttatgtggtagagatatgtttgaatatgttaatttgatgt 80062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 142; Significance: 1e-74; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 86 - 243
Target Start/End: Original strand, 5983 - 6140
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5983 taaggtaagggggttagttttcatcataatcatatagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 6082  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6083 aatctttgaaattcgtgcttatgttgtagagatgtgtttgaatatgttaatttgatgt 6140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 86 - 232
Target Start/End: Original strand, 5777 - 5923
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5777 taaggtaagggggttagttttcatcataatcatatagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 5876  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgt 232  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  5877 aatctttgaaattcgtgcttctgttgtagagatgtgtttgaatatgt 5923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 141; Significance: 5e-74; HSPs: 2)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 44 - 243
Target Start/End: Original strand, 4304 - 4504
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcatttagttaattctttttctcttg-tt 142  Q
    |||||||||||| ||||||  ||||| ||||||||| | | |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||  ||    
T  4304 ttaggagctaaagtgaagcaaaagtttggattaatcattacctaaggtaagggggttagactttatcataatcatttggttaattctttttctcttcatt 4403  T
Q  143 ctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatg 242  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  4404 ctatgcataattgattatgggaataagtgattatcatgaacccaatctttgaaattagtgcttatgttgtagagatatgtttaaatatgttaatttgatg 4503  T
Q  243 t 243  Q
    |    
T  4504 t 4504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 5 - 85
Alignment:
Q  163 gaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5 gaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 85  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 86 - 241
Target Start/End: Original strand, 162078 - 162233
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  162078 taaggtaagggggttagttttcatcataatcatctagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 162177  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgat 241  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  162178 aatctttgaaattcgtgcttatgttgtagagatgtgtttgaatatgttaatttgat 162233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 86 - 241
Target Start/End: Original strand, 166164 - 166319
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  166164 taaggtaagggggttagttttcatcataatcatctagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 166263  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgat 241  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  166264 aatctttgaaattcgtgcttatgttgtagagatgtgtttgaatatgttaatttgat 166319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 86 - 243
Target Start/End: Original strand, 31180 - 31337
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31180 taaggtaagggggttagtttttatcacaatcatttagttaattcattttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 31279  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  31280 aatctttgaaattcgtgcttatgttgtagacatgtgtttgaatatgttaatttgatgt 31337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 86 - 243
Target Start/End: Complemental strand, 41664 - 41507
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41664 taaggtaagggggttagtttttatcacaatcatttagttaattcattttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 41565  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  41564 aatctttgaaattcgtgcttatgttgtagacatgtgtttgaatatgttaatttgatgt 41507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 36904 - 37012
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||||||||||||||  |  ||||| || | ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||    
T  36904 gagagaagaacttgaagaatcca--attgg-gtaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctt 37000  T
Q  107 tatcataatcat 118  Q
    ||||||||||||    
T  37001 tatcataatcat 37012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 86 - 243
Target Start/End: Complemental strand, 30449 - 30292
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||||||||||| | || ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30449 taaggtaagggggttatttttcatcataatcatttagttaattatttttctcttgttctatgcataattgattatgggaataagtgattatcatgaaccc 30350  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
     ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  30349 tatctttgaaattcatgcttatgttgtagagatatgtttgaatatgttaatttgatgt 30292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 413 - 338
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| |||||||||   |||| |||||||||||| ||||||||||||||||||||  |||||| ||||||    
T  413 cttaggagctgaattgaagcgagagtttggattaatcttcttctaaggtaagggggttagttattatcaaaatcat 338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 129; Significance: 7e-67; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 87 - 227
Target Start/End: Complemental strand, 42708 - 42568
Alignment:
Q  87 aaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccca 186  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42708 aaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccca 42609  T
Q  187 atctttgaaattcgtgcttatgttgtagagatatgtttgaa 227  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  42608 atctttgaaattcgtgcttatgtggtagagatatggttgaa 42568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 13927 - 13824
Alignment:
Q  15 aacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataa 114  Q
    |||||||||||||||| ||||| |||||  ||| || |||| ||||||||||||| ||||||||| | |||||||||||||||||||||||| |||||||    
T  13927 aacttgaagaattaagaattggggtgaatctagaagataaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataa 13828  T
Q  115 tcat 118  Q
    ||||    
T  13827 tcat 13824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 86 - 243
Target Start/End: Original strand, 352 - 508
Alignment:
Q  86 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    |||||||| ||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  352 taaggtaacggggttattctttatcataatcatctagttaattctttt-ctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 450  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    ||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  451 aatatttgaaatttgtgcttatgttgtagagatatatttgaatatgttaatttgatgt 508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 124; Significance: 7e-64; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 130911 - 130760
Alignment:
Q  87 aaggtaagggggttagtctttatcataatcatttagttaattctttttctcttg-ttctatgcataattgattatgagaataagtgattatcatgaaccc 185  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  130911 aaggtaagggggttagtctttatcataatcatttgattaattctttttctcttgattctatgcataattgattatgagaataagtgattatcatgaaccc 130812  T
Q  186 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatt 237  Q
    ||||||||||||||||||| |||||||||||||||||||| ||| |||||||    
T  130811 aatctttgaaattcgtgctcatgttgtagagatatgtttggatacgttaatt 130760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 89305 - 89410
Alignment:
Q  13 agaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcat 112  Q
    |||||||||||||| ||| |||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  89305 agaacttgaagaatcaagaattggagtgagcttaggagttaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtcttcatcat 89404  T
Q  113 aatcat 118  Q
     |||||    
T  89405 gatcat 89410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 107635 - 107740
Alignment:
Q  13 agaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcat 112  Q
    |||||||||||||| ||| |||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  107635 agaacttgaagaatcaagaattggagtgagcttaggagttaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtcttcatcat 107734  T
Q  113 aatcat 118  Q
     |||||    
T  107735 gatcat 107740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 101; Significance: 4e-50; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 26260 - 26372
Alignment:
Q  6 agagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtct 105  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26260 agagagaagaacttgaagaattaaggattggagtgagcttaggagctaaattgaagcctaagatgggattaatcttcatctaaggtaagggggttagtct 26359  T
Q  106 ttatcataatcat 118  Q
    |||||||||||||    
T  26360 ttatcataatcat 26372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 8021 - 8125
Alignment:
Q  15 aacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaa-gggggttagtctttatcata 113  Q
    |||||||||||| ||| ||||  |||||  ||||||||||| ||||||||||||| ||||||||| | ||||||||||| ||||||||||||| ||||||    
T  8021 aacttgaagaatcaagaattgaggtgaatctaggagctaaaatgaagcctaagtttggattaatcattatctaaggtaaggggggttagtcttcatcata 8120  T
Q  114 atcat 118  Q
    |||||    
T  8121 atcat 8125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 12138 - 12063
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||| ||||| ||||||||| | ||||||| |||||||||||||||| |||||||||||    
T  12138 cttaggagctaaattgaagccaaagtttggattaatcattatctaagataagggggttagtcttcatcataatcat 12063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 82; Significance: 8e-39; HSPs: 3)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 154 - 243
Target Start/End: Complemental strand, 15236 - 15147
Alignment:
Q  154 tgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgt 243  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15236 tgattatgggaataagtgattatcatgaacccaatctttgaaattcgtgcttatgtcgtagagatatgtttgaatatgttaatttgatgt 15147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 15309 - 15238
Alignment:
Q  6 agagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaa 77  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15309 agagagaagaacttgaagaattaaggattggagtgaacttaggagctaaattgaagcctaagttgggattaa 15238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 839 - 914
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| ||||||| |   ||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  839 cttaggagctgaattgaatcaagagttggggttaatcttcttctaaggtaagggggttagtctttatcataatcat 914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 147006 - 146906
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  147006 cttgaagaatcaag-attggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 146908  T
Q  117 at 118  Q
    ||    
T  146907 at 146906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 9263 - 9160
Alignment:
Q  15 aacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataa 114  Q
    |||||||||||| ||| |||||||||| ||||||||||||| |||||||||||||| | |||||| | |||||||||||| | ||||||||| |||||||    
T  9263 aacttgaagaatcaagaattggagtgagcttaggagctaaagtgaagcctaagttgaggttaatcataatctaaggtaagtgtgttagtcttcatcataa 9164  T
Q  115 tcat 118  Q
    ||||    
T  9163 tcat 9160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 118
Target Start/End: Original strand, 123011 - 123119
Alignment:
Q  10 agaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttat 109  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |     
T  123011 agaagaacttgaagaatcaagaattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcac 123110  T
Q  110 cataatcat 118  Q
    |||||||||    
T  123111 cataatcat 123119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 9283 - 9183
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    |||||||||| ||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9283 cttgaagaatcaag-attggagtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 9185  T
Q  117 at 118  Q
    ||    
T  9184 at 9183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 51035 - 51140
Alignment:
Q  13 agaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcat 112  Q
    ||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||| | ||||||||||||||    
T  51035 agaacttgaagaactaaggattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatcttaggtaaggagattagtctttatcat 51134  T
Q  113 aatcat 118  Q
    ||||||    
T  51135 aatcat 51140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 78; Significance: 2e-36; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 172310 - 172210
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    |||||||||| ||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  172310 cttgaagaatcaag-attggagtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 172212  T
Q  117 at 118  Q
    ||    
T  172211 at 172210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 178013 - 177913
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    |||||||||| ||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  178013 cttgaagaatcaag-attggagtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 177915  T
Q  117 at 118  Q
    ||    
T  177914 at 177913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 164829 - 164903
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| |||||| ||| || | ||||||| | | ||||||||||||||||||| ||  ||||||||||    
T  164829 ttaggagctaaagtgaagcttaaatttgaattaatcataacctaaggtaagggggttagtgttcttcataatcat 164903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 108 - 242
Target Start/End: Original strand, 44036 - 44170
Alignment:
Q  108 atcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttat 207  Q
    |||||||||| ||||||||||  || |||||| | |||||||||| |||||||  ||||||||||||||  |||||| ||||||||||||||||||| ||    
T  44036 atcataatcacttagttaatttcttctctcttttgctatgcataagtgattatttgaataagtgattattgtgaacctaatctttgaaattcgtgctcat 44135  T
Q  208 gttgtagagatatgtttgaatatgttaatttgatg 242  Q
    ||||||| ||||||||||| |||||||||||||||    
T  44136 gttgtagtgatatgtttgagtatgttaatttgatg 44170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 1530 - 1430
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    |||||||||| ||| |||||||||| ||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  1530 cttgaagaatcaag-attggagtgagcttaggagctaaagtgaagcctaagttgtgattaatctttatctaaggtaagggggttagtctttatcataatc 1432  T
Q  117 at 118  Q
    ||    
T  1431 at 1430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 3440 - 3540
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    |||||||||| ||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  3440 cttgaagaatcaag-attggagtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttgtcataatc 3538  T
Q  117 at 118  Q
    ||    
T  3539 at 3540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 72; Significance: 8e-33; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 247323 - 247398
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  247323 cttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 247398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 34032 - 34107
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||   |||| || ||||||||||||||||||||||||||||||||| |||||||||||    
T  34032 cttaggagctaaattgaagcaagagtttgggttaatcttcatctaaggtaagggggttagtcttcatcataatcat 34107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 272416 - 272330
Alignment:
Q  32 attggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  272416 attggagtgagctcaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 272330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 12519 - 12418
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    |||||||||| ||  |||||||||| ||||||||||||| ||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||    
T  12519 cttgaagaatcaaaaattggagtgagcttaggagctaaagtgaagcctaagttaggattaatctctatctaaggtaagggggttagtctttatcataatc 12420  T
Q  117 at 118  Q
    ||    
T  12419 at 12418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 42139 - 42034
Alignment:
Q  13 agaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcat 112  Q
    ||||||||||||| |||| |||||| ||| |||||||| |||||||||| |||||||||||||||| || |||||||||||||||||| |||||||||||    
T  42139 agaacttgaagaactaaggattggactgagcttaggaggtaaattgaagtctaagttgggattaatatttatctaaggtaagggggttggtctttatcat 42040  T
Q  113 aatcat 118  Q
    ||||||    
T  42039 aatcat 42034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 120
Target Start/End: Original strand, 57315 - 57426
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||| ||||| |||| ||| ||||| |||| ||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  57315 gagagaagagcttgaggaatcaag-attgg-gtgagcttagtagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctt 57412  T
Q  107 tatcataatcattt 120  Q
    ||||||||||||||    
T  57413 tatcataatcattt 57426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 128027 - 128127
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 116  Q
    |||||||||| ||| ||||||||||  ||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  128027 cttgaagaatcaag-attggagtgagattaggagataaaatgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 128125  T
Q  117 at 118  Q
    ||    
T  128126 at 128127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 443 - 339
Alignment:
Q  13 agaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcat 112  Q
    |||||||||||||| ||| ||||| |||  ||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||| |||||    
T  443 agaacttgaagaatcaagaattggggtggtcttaggagctaaattgaagcctaagtttggattaatccttatctaaggtaagggggttagtcttcatcat 344  T
Q  113 aatca 117  Q
    |||||    
T  343 aatca 339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 36766 - 36869
Alignment:
Q  17 cttgaagaattaagtattggagtgaacttaggagctaaat---tgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcata 113  Q
    |||||||||| ||| |||||||||| |||||||||||||    ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  36766 cttgaagaatcaag-attggagtgagcttaggagctaaagaagtgaagcctaagttgggattaatctttatttaaggtaagggggttagtctttatcata 36864  T
Q  114 atcat 118  Q
    |||||    
T  36865 atcat 36869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 25640 - 25532
Alignment:
Q  8 agagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtcttt 107  Q
    |||| |||||||||||||| ||| ||| | |||| ||||||||||||||||||||||||||| || |||||| | ||||||||||||||||||||||||     
T  25640 agaggagaacttgaagaatcaagaattag-gtgagcttaggagctaaattgaagcctaagtttgggttaatccttatctaaggtaagggggttagtcttc 25542  T
Q  108 atcataatca 117  Q
    ||||||||||    
T  25541 atcataatca 25532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 22932 - 22857
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  22932 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 22857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 27187 - 27112
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  27187 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 27112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 1453 - 1528
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  1453 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 1528  T

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Target: scaffold0507 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 1406 - 1557
Alignment:
Q  88 aggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaa 187  Q
    |||||||||||||||  || ||||||||||||||||  | |   ||||  ||||| |||| |||| || |||   |||||| |||||||  |||||||||    
T  1406 aggtaagggggttagaattcatcataatcatttagtgtagt---tttcatttgttgtatgaataagtgcttaattgaataaatgattattgtgaacccaa 1502  T
Q  188 tctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatg 242  Q
    ||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  1503 tctttgaaattcgtgctcatgttgtagtgatatgtttgagtatgttaatttgatg 1557  T

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Target: scaffold0084 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 55936 - 56045
Alignment:
Q  7 gagagaagaacttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctt 106  Q
    ||||||||| |||||||||| ||  ||||| ||||||||||||| |||||| ||||||||||| ||||||||| | ||||| ||| ||||||||||||||    
T  55936 gagagaagagcttgaagaatcaa--attggggtgaacttaggagataaattaaagcctaagtttggattaatcattatctacggtcagggggttagtctt 56033  T
Q  107 tatcataatcat 118  Q
     |||||||||||    
T  56034 catcataatcat 56045  T

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Target: scaffold1295 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 242
Target Start/End: Complemental strand, 384 - 305
Alignment:
Q  163 gaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatg 242  Q
    ||||||||||||||  ||||||||||||||||||||| |||| ||||||||| ||||||||||| |||||||||||||||    
T  384 gaataagtgattattgtgaacccaatctttgaaattcttgctcatgttgtagtgatatgtttgagtatgttaatttgatg 305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 5921 - 5846
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| ||| ||  |||||||||||||||||||||||||||||||||| |||||||||    
T  5921 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttaccataatcat 5846  T

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Target: scaffold0118 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 34266 - 34340
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| ||||||||||||| ||||||||| | |||||||||||||||||||||||| |||||||||||    
T  34266 ttaggagctaaaatgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcat 34340  T

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Target: scaffold0066 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 45413 - 45338
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| |||||||||||||||| ||||||| | | |||||||||||||||||||||||| |||||||||||    
T  45413 cttaggagcttaattgaagcctaagtttggattaaccattatctaaggtaagggggttagtcttcatcataatcat 45338  T

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Target: scaffold0066; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 54799 - 54724
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| ||||||||| |||||| ||||||| | | ||||||||||||| |||||||||| |||||||||||    
T  54799 cttaggagcttaattgaagcttaagtttggattaaccattatctaaggtaaggtggttagtcttcatcataatcat 54724  T

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Target: scaffold0207 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 18100 - 18026
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||| |||| ||||||||||||| ||||||||| | |||||||||||||||||||||||| |||||||||||    
T  18100 ttaggagttaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcat 18026  T

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Target: scaffold0125 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 42039 - 41965
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| ||||||||||||| ||||||||| | | |||||||||||||||||||||| |||||||||||    
T  42039 ttaggagctaaagtgaagcctaagtttggattaatcattacctaaggtaagggggttagtcttcatcataatcat 41965  T

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Target: scaffold0413 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 120
Target Start/End: Original strand, 5947 - 6024
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcattt 120  Q
    |||||||||| |||||||||   |||| ||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  5947 cttaggagctgaattgaagcaagagttaggattaatctctatctaaggtaagggggttagtctttatcataatcattt 6024  T

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Target: scaffold0023 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 49002 - 48903
Alignment:
Q  18 ttgaagaattaagtattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatca 117  Q
    ||||||||| ||| |||||||||| ||||||||||||| | |||||||||||  |||| | | | | |||||||||||||||||||||||||||||||||    
T  49002 ttgaagaatcaag-attggagtgagcttaggagctaaagtaaagcctaagtttagattgagcattacctaaggtaagggggttagtctttatcataatca 48904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 153881 - 153956
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| |||||||||   |||| |  ||||||||| ||||||||||||||||||||  |||||||||||||    
T  153881 cttaggagctgaattgaagcaagagtttgagttaatcttcttctaaggtaagggggttagttattatcataatcat 153956  T

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Target: scaffold0023; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 118
Target Start/End: Original strand, 61121 - 61154
Alignment:
Q  85 ctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||||||||||||| |||||||||||    
T  61121 ctaaggtaagggggttagtcttcatcataatcat 61154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 10213 - 10288
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||| |||||||| |||||||||||||||| |||||| |||||||||||||||||||| |||||  ||||||||||    
T  10213 cttatgagctaaagtgaagcctaagttggggttaatcatcatctaaggtaagggggtttgtcttcttcataatcat 10288  T

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Target: scaffold0079 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 242
Target Start/End: Original strand, 3761 - 3897
Alignment:
Q  110 cataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgt 209  Q
    |||||||| ||||||| ||  || |||||| |||||||||||| || ||||  ||||||||||||||  |||| ||||  ||||||||||||||| ||||    
T  3761 cataatcacttagttagtttcttctctctttttctatgcataagtgcttatttgaataagtgattattgtgaaaccaacttttgaaattcgtgctcatgt 3860  T
Q  210 tgtag----agatatgtttgaatatgttaatttgatg 242  Q
    |||||    | |||||||||| |||||||||||||||    
T  3861 tgtagtgatatatatgtttgagtatgttaatttgatg 3897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 5434 - 5508
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| ||||||||||| | ||||||||| | | |||||||||||||||||||||| |||||||||||    
T  5434 ttaggagctaaagtgaagcctaagattggattaatcattacctaaggtaagggggttagtcttcatcataatcat 5508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 5623 - 5549
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| ||||||| ||||| ||||||||| | | |||||||||||||||||||||| |||||||||||    
T  5623 ttaggagctaaaatgaagcccaagtttggattaatcattacctaaggtaagggggttagtcttcatcataatcat 5549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 49710 - 49784
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| ||||||||||||| ||||||||| | | ||||||||||||||||||||||  ||||||||||    
T  49710 ttaggagctaaagtgaagcctaagtttggattaatcattacctaaggtaagggggttagtcttcttcataatcat 49784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 9223 - 9297
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| |||||||||||||  |||||| | |||||||||||||||||||||||  |||||| ||||||    
T  9223 ttaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggttagttattatcacaatcat 9297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 16121 - 16195
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| |||||||||||||  |||||| | |||||||||||||||||||||||  |||||| ||||||    
T  16121 ttaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggttagttattatcacaatcat 16195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 95372 - 95298
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| ||||||||| ||| ||||||||| | | ||||||||||||||||||||||  ||||||||||    
T  95372 ttaggagctaaagtgaagcctaggtttggattaatcattacctaaggtaagggggttagtcttcttcataatcat 95298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 12002 - 12075
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatca 117  Q
    |||||||||||| |||||||||||||   ||||| | |||||||||||||||||||||||  ||||||||||||    
T  12002 ttaggagctaaagtgaagcctaagttaaaattaaacatcatctaaggtaagggggttagttattatcataatca 12075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 6980 - 6905
Alignment:
Q  42 acttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatca 117  Q
    ||||||||||| |||||||||   |||| || ||||||||| ||||||||||||||||||||  ||||||||||||    
T  6980 acttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatca 6905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 3578 - 3505
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| ||||||||||||| | ||||||| ||||||||||||| ||||||| ||||  ||||||||||    
T  3578 ttaggagctaaagtgaagcctaagtttgaattaatcatcatctaaggtaa-ggggttattcttcctcataatcat 3505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 2773 - 2700
Alignment:
Q  45 taggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||| |||||||||   |||| || ||||||||| ||||||||||||||||||||  |||||||||||||    
T  2773 taggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 2700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 54255 - 54182
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatca 117  Q
    |||||||||| | |||||||||||||  |||||| | |||||||||||||||||||| || || ||||||||||    
T  54255 ttaggagctatagtgaagcctaagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 54182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 64394 - 64470
Alignment:
Q  42 acttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||| |||||||||   |||| || ||||||||| ||||||||||||||||||||  |||||| ||||||    
T  64394 acttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcacaatcat 64470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 1449 - 1524
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| |||||||||    ||| || ||||||||| ||||||||||||||||||||  |||||||||||||    
T  1449 cttaggagctgaattgaagcaagggtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 1524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 1389 - 1463
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||| |||||||||   ||||  | ||||||||| ||||||||||||||||||||  |||||||||||||    
T  1389 ttaggagctgaattgaagcaagagtttaggttaatcttcttctaaggtaagggggttagttattatcataatcat 1463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 6068 - 6142
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| ||||||| ||||| | ||| ||| | | |||||||||||||||||||||| | |||||||||    
T  6068 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttagtcttaaacataatcat 6142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 9370 - 9444
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| ||||||| ||||| | ||| ||| | | ||||||||||||||||||||||  ||||||||||    
T  9370 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttagtcttcttcataatcat 9444  T

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Target: scaffold0013 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 154304 - 154365
Alignment:
Q  42 acttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagt 103  Q
    ||||||||||| |||||||||   |||| || ||||||||| ||||||||||||||||||||    
T  154304 acttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagt 154365  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 7590 - 7517
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatca 117  Q
    |||||||||||| |||||| | ||||  |||||| | |||||||||||||||||||| || || ||||||||||    
T  7590 ttaggagctaaagtgaagctttagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 7517  T

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Target: scaffold0892 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 3799 - 3743
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggtt 100  Q
    |||||||||||| |||||||||||||  |||||| | ||||||||||||| ||||||    
T  3799 ttaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaatggggtt 3743  T

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Target: scaffold0369 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 4104 - 4029
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||| |||||||||   |||| || |||||| || |||||||||||||| |||||  |||||||||||||    
T  4104 cttaggagctgaattgaagcaagagttagggttaatcatcttctaaggtaaggggtttagttattatcataatcat 4029  T

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Target: scaffold0057 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 6133 - 6082
Alignment:
Q  191 ttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatg 242  Q
    |||||||| ||||| ||||||||| ||||||||||| |||||||| ||||||    
T  6133 ttgaaatttgtgctcatgttgtagtgatatgtttgagtatgttaaattgatg 6082  T

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Target: scaffold0387 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 7053 - 7127
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| |||||| ||| || | ||||||| | | ||||||||||||||||||| ||  ||||||||||    
T  7053 ttaggagctaaagtgaagcttaaatttgaattaatcataacctaaggtaagggggttagtgttcttcataatcat 7127  T

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Target: scaffold0367 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 118
Target Start/End: Original strand, 17207 - 17241
Alignment:
Q  84 tctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||||||||||||||||| |||||||||||    
T  17207 tctaaggtaagggggttagtcttcatcataatcat 17241  T

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Target: scaffold0092 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 3713 - 3636
Alignment:
Q  45 taggagctaaattgaagcctaagtt---gggattaatcttcatctaaggtaagggggttagtctttatcataatcattta 121  Q
    |||||||||||||||||| |||| |   |||||||||||  | ||||||||||||||||||  || ||||||||||||||    
T  3713 taggagctaaattgaagcttaagatagggggattaatct--aactaaggtaagggggttagaattcatcataatcattta 3636  T

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Target: scaffold0092; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 10623 - 10697
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    ||||||||| |||||||||   |||| || |||||| || || |||||||||||||||||  |||||||||||||    
T  10623 ttaggagctgaattgaagcaagagttagggttaatcatcttcaaaggtaagggggttagttattatcataatcat 10697  T

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Target: scaffold0049 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 48578 - 48504
Alignment:
Q  44 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||||||| ||||||| || || | ||||||| | | |||| |||||||||||||||||  ||||||||||    
T  48578 ttaggagctaaagtgaagcccaaatttgaattaatcataacctaatgtaagggggttagtcttcttcataatcat 48504  T

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Target: scaffold0191 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 7332 - 7405
Alignment:
Q  45 taggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||| |||||||||   | || || ||||||||| || |||||||||||||||||  |||||||||||||    
T  7332 taggagctgaattgaagcaagaattagggttaatcttcttcaaaggtaagggggttagttattatcataatcat 7405  T

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Target: scaffold0139 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 13935 - 14008
Alignment:
Q  45 taggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||| |||||||||    ||| ||||||||| || || |||||||||||||||||  |||||||||||||    
T  13935 taggagctgaattgaagcaagggttaggattaatcatcttcaaaggtaagggggttagttattatcataatcat 14008  T

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Target: scaffold0139; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 20989 - 21062
Alignment:
Q  45 taggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 118  Q
    |||||||| |||||||||    ||| ||||||||| || || |||||||||||||||||  |||||||||||||    
T  20989 taggagctgaattgaagcaagggttaggattaatcatcttcaaaggtaagggggttagttattatcataatcat 21062  T

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Target: scaffold0529 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 3343 - 3271
Alignment:
Q  43 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataat 115  Q
    |||||||||| |||||||||   ||||  | ||||||||| |||||||||||||||||| |  ||||||||||    
T  3343 cttaggagctgaattgaagcaagagtttcggttaatcttcttctaaggtaagggggttaattattatcataat 3271  T

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